Adh MAGPIE CDS 1 441 . - 2 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE splice5 441 442 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh calypso tandemrepeat 1622 1636 . + 1 MAGPIE_CTG "dm_001" # 15 x A
Adh MAGPIE splice3 2378 2379 . - 2 MAGPIE_ID "dm_001_MP_dna_1"
Adh calypso tandemrepeat 2551 2568 . + 0 MAGPIE_CTG "dm_001" # 3 x ACCAGA
Adh MAGPIE CDS 2379 2862 . - 2 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE splice5 2862 2863 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE splice3 3224 3225 . - 2 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE CDS 3225 3550 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE splice5 3550 3551 . - 0 MAGPIE_ID "dm_001_MP_dna_1"
Adh calypso tandemrepeat 3603 3617 . + 2 MAGPIE_CTG "dm_001" # 3 x AACGC
Adh MAGPIE splice3 6717 6718 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE CDS 6718 7018 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE gene 1 7018 1 - 1 MAGPIE_ID "dm_001_MP_dna_1" # GN B4;DE drosophila melanogaster B4 mRNA;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 7016 7018 . - 1 MAGPIE_ID "dm_001_MP_dna_1"
Adh calypso tandemrepeat 10170 10185 . + 2 MAGPIE_CTG "dm_001" # 4 x CCTG
Adh MAGPIE promotor 11811 11850 . - 2 MAGPIE_ID "dm_001_MP_dna_1"
Adh MAGPIE polyA_signal 12655 12660 . - 2 MAGPIE_ID "dm_001_GS_dna_2"
Adh MAGPIE exon 13942 14166 0.965 - 2 MAGPIE_ID "dm_001_GS_dna_2" #dm_001_GS_2.01
Adh MAGPIE gene 13942 14166 . - 2 MAGPIE_ID "dm_001_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 14503 14542 . - 1 MAGPIE_ID "dm_001_GS_dna_2"
Adh MAGPIE promotor 14565 14604 . + 2 MAGPIE_ID "dm_001_GS_dna_3"
Adh MAGPIE exon 15041 15203 0.928 + 1 MAGPIE_ID "dm_001_GS_dna_3" #dm_001_GS_3.01
Adh MAGPIE exon 15567 15718 0.910 + 2 MAGPIE_ID "dm_001_GS_dna_3" #dm_001_GS_3.02
Adh MAGPIE gene 15041 15718 . - 1 MAGPIE_ID "dm_001_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 15753 15758 . + 2 MAGPIE_ID "dm_001_GS_dna_3"
Adh MAGPIE polyA_signal 16261 16266 . - 2 MAGPIE_ID "dm_001_GS_dna_4"
Adh reputer repeat 16071 16400 . + . REPEAT "21" # maximal forward repeat
Adh MAGPIE exon 16481 19746 0.784 - 2 MAGPIE_ID "dm_001_GS_dna_4" #dm_001_GS_4.02
Adh MAGPIE exon 19917 20424 0.823 - 2 MAGPIE_ID "dm_001_GS_dna_4" #dm_001_GS_4.01
Adh MAGPIE gene 16481 20424 1 - 2 MAGPIE_ID "dm_001_GS_dna_4" # DE prgag-pol;ST putative;TY single function;CC Close match to Drosophila. Transposon?;
Adh MAGPIE promotor 20446 20485 . - 1 MAGPIE_ID "dm_001_GS_dna_4"
Adh reputer repeat 20990 21319 . + . REPEAT "21" # maximal forward repeat
Adh MAGPIE promotor 21475 21514 . + 0 MAGPIE_ID "dm_001_GS_dna_5"
Adh MAGPIE exon 21599 21979 0.795 + 1 MAGPIE_ID "dm_001_GS_dna_5" #dm_001_GS_5.01
Adh MAGPIE exon 22140 22295 0.999 + 2 MAGPIE_ID "dm_001_GS_dna_5" #dm_001_GS_5.02
Adh MAGPIE gene 21599 22295 . - 0 MAGPIE_ID "dm_001_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 22325 22330 . + 1 MAGPIE_ID "dm_001_GS_dna_5"
Adh MAGPIE promotor 22440 22479 . + 2 MAGPIE_ID "dm_001_GS_dna_6"
Adh MAGPIE exon 22800 23189 0.797 + 2 MAGPIE_ID "dm_001_GS_dna_6" #dm_001_GS_6.01
Adh MAGPIE exon 23249 23404 0.899 + 1 MAGPIE_ID "dm_001_GS_dna_6" #dm_001_GS_6.02
Adh MAGPIE gene 22800 23404 . - 1 MAGPIE_ID "dm_001_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 23459 23464 . + 1 MAGPIE_ID "dm_001_GS_dna_6"
Adh MAGPIE promotor 23662 23701 . + 0 MAGPIE_ID "dm_001_GS_dna_7"
Adh MAGPIE exon 23733 24033 0.248 + 2 MAGPIE_ID "dm_001_GS_dna_7" #dm_001_GS_7.01
Adh MAGPIE exon 24887 25209 0.368 + 1 MAGPIE_ID "dm_001_GS_dna_7" #dm_001_GS_7.02
Adh MAGPIE exon 25843 26166 0.216 + 0 MAGPIE_ID "dm_001_GS_dna_7" #dm_001_GS_7.03
Adh MAGPIE exon 26242 26394 0.432 + 0 MAGPIE_ID "dm_001_GS_dna_7" #dm_001_GS_7.04
Adh MAGPIE gene 23733 26394 . - 2 MAGPIE_ID "dm_001_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 26417 26422 . + 1 MAGPIE_ID "dm_001_GS_dna_7"
Adh MAGPIE promotor 26522 26561 . + 1 MAGPIE_ID "dm_001_GS_dna_8"
Adh MAGPIE exon 26630 26971 0.663 + 1 MAGPIE_ID "dm_001_GS_dna_8" #dm_001_GS_8.01
Adh MAGPIE exon 27952 28109 0.647 + 0 MAGPIE_ID "dm_001_GS_dna_8" #dm_001_GS_8.02
Adh MAGPIE exon 28186 28303 0.855 + 0 MAGPIE_ID "dm_001_GS_dna_8" #dm_001_GS_8.03
Adh MAGPIE gene 26630 28303 . - 1 MAGPIE_ID "dm_001_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 28336 28359 . + 0 MAGPIE_CTG "dm_001" # 12 x TA
Adh MAGPIE polyA_signal 28471 28476 . + 0 MAGPIE_ID "dm_001_GS_dna_8"
Adh MAGPIE polyA_signal 29071 29076 . - 2 MAGPIE_ID "dm_001_GS_dna_9"
Adh MAGPIE exon 29156 29479 0.977 - 1 MAGPIE_ID "dm_001_GS_dna_9" #dm_001_GS_9.01
Adh MAGPIE gene 29156 29479 . - 1 MAGPIE_ID "dm_001_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 29566 29581 . + 0 MAGPIE_CTG "dm_001" # 4 x GTAT
Adh MAGPIE promotor 30944 30983 . - 0 MAGPIE_ID "dm_001_GS_dna_9"
Adh MAGPIE exon 32232 32319 0.395 + 2 MAGPIE_ID "dm_001_GS_dna_10" #dm_001_GS_10.01
Adh MAGPIE exon 34532 34822 0.380 + 1 MAGPIE_ID "dm_001_GS_dna_10" #dm_001_GS_10.02
Adh MAGPIE exon 34857 35107 0.227 + 2 MAGPIE_ID "dm_001_GS_dna_10" #dm_001_GS_10.03
Adh MAGPIE exon 35161 35502 0.385 + 0 MAGPIE_ID "dm_001_GS_dna_10" #dm_001_GS_10.04
Adh MAGPIE exon 35547 35771 0.601 + 2 MAGPIE_ID "dm_001_GS_dna_10" #dm_001_GS_10.05
Adh MAGPIE gene 32232 35771 2 - 0 MAGPIE_ID "dm_001_GS_dna_10" # DE GH19966.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 36410 37315 0.990 + 1 MAGPIE_ID "dm_001_GS_dna_11" #dm_001_GS_11.01
Adh MAGPIE gene 36410 37315 . - 1 MAGPIE_ID "dm_001_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 37867 37881 . + 0 MAGPIE_CTG "dm_001" # 3 x CTTGA
Adh calypso tandemrepeat 39133 39148 . + 0 MAGPIE_CTG "dm_001" # 16 x A
Adh MAGPIE exon 39549 39631 0.622 - 1 MAGPIE_ID "dm_001_GS_dna_12" #dm_001_GS_12.05
Adh calypso tandemrepeat 39991 40005 . + 0 MAGPIE_CTG "dm_001" # 15 x A
Adh calypso tandemrepeat 40748 40762 . + 1 MAGPIE_CTG "dm_001" # 5 x TGC
Adh MAGPIE exon 40669 40780 0.735 - 1 MAGPIE_ID "dm_001_GS_dna_12" #dm_001_GS_12.04
Adh calypso tandemrepeat 41083 41098 . + 0 MAGPIE_CTG "dm_001" # 4 x AATA
Adh calypso tandemrepeat 41804 41818 . + 1 MAGPIE_CTG "dm_001" # 5 x TTC
Adh calypso tandemrepeat 41852 41867 . + 1 MAGPIE_CTG "dm_001" # 8 x TG
Adh MAGPIE exon 42268 42476 0.444 - 0 MAGPIE_ID "dm_001_GS_dna_12" #dm_001_GS_12.03
Adh calypso tandemrepeat 42651 42670 . + 2 MAGPIE_CTG "dm_001" # 10 x TC
Adh MAGPIE exon 42887 43129 0.331 - 1 MAGPIE_ID "dm_001_GS_dna_12" #dm_001_GS_12.02
Adh MAGPIE start_codon 45358 45360 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 45358 45421 . + 0 MAGPIE_ID "dm_003_MP_dna_8" #Initial exon of kuzbanian.
Adh MAGPIE exon 45358 45421 0.210 + 0 MAGPIE_ID "dm_002_GS_dna_1" #dm_002_GS_1.01
Adh MAGPIE splice5 45421 45422 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh calypso tandemrepeat 46851 46868 . + 2 MAGPIE_CTG "dm_001" # 9 x AT
Adh calypso tandemrepeat 46851 46868 . + 2 MAGPIE_CTG "dm_002" # 9 x AT
Adh calypso tandemrepeat 47082 47097 . + 2 MAGPIE_CTG "dm_001" # 16 x T
Adh calypso tandemrepeat 47082 47097 . + 2 MAGPIE_CTG "dm_002" # 16 x T
Adh MAGPIE exon 47381 47660 0.172 - 0 MAGPIE_ID "dm_001_GS_dna_12" #dm_001_GS_12.01
Adh MAGPIE gene 39549 47660 3 - 0 MAGPIE_ID "dm_001_GS_dna_12" # DE drosophila melanogaster B4 mRNA;ST putative;TY single function;CC No fastA hits. Match to B4 real?;
Adh MAGPIE exon 49369 49475 0.345 + 0 MAGPIE_ID "dm_002_GS_dna_1" #dm_002_GS_1.02
Adh MAGPIE exon 49611 49805 0.454 + 2 MAGPIE_ID "dm_002_GS_dna_1" #dm_002_GS_1.03
Adh MAGPIE gene 45358 49805 . + 0 MAGPIE_ID "dm_002_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 49896 49901 . + 2 MAGPIE_ID "dm_002_GS_dna_1"
Adh MAGPIE promotor 50976 51015 . + 2 MAGPIE_ID "dm_002_MP_dna_2"
Adh MAGPIE splice3 52554 52555 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 52555 52587 . + 0 MAGPIE_ID "dm_003_MP_dna_8" #Internal exon of kuzbanian.
Adh MAGPIE splice5 52587 52588 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh calypso tandemrepeat 53890 53904 . + 0 MAGPIE_CTG "dm_002" # 3 x TTTTA
Adh calypso tandemrepeat 54248 54267 . + 1 MAGPIE_CTG "dm_002" # 20 x A
Adh tblastx similarity 54270 54524 9e-25 + 2 MAGPIE_CTG "dm_002" #Identical to Drosophila melanogaster F element 12, 5' end
Adh blastx similarity 54448 55776 0.0 + 0 MAGPIE_CTG "dm_002" #>gi|1839520|bbs|178174 (S82273) Fex
Adh tblastx similarity 54270 56142 5e-14 - 2 MAGPIE_CTG "dm_002" #>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5
Adh MAGPIE CDS 56136 58711 . + 2 MAGPIE_ID "dm_002_MP_dna_2"
Adh MAGPIE gene 56136 58711 1 + 2 MAGPIE_ID "dm_002_MP_dna_2" # DE putative reverse transcriptase (858 aa);ST putative;TY single function;CC Probable transposon;
Adh tblastx similarity 57003 58856 0.0 - 0 MAGPIE_CTG "dm_002" #Identical sequence on Chromosome 3R, region 89A1-89A5.
Adh MAGPIE polyA_signal 58924 58929 . + 0 MAGPIE_ID "dm_002_MP_dna_2"
Adh calypso tandemrepeat 58947 58969 . + 2 MAGPIE_CTG "dm_002" # 23 x A
Adh MAGPIE polyA_signal 59421 59426 . - 0 MAGPIE_ID "dm_002_GS_dna_3"
Adh calypso tandemrepeat 63281 63295 . + 1 MAGPIE_CTG "dm_002" # 3 x AACAG
Adh MAGPIE exon 63943 64092 0.850 - 2 MAGPIE_ID "dm_002_GS_dna_3" #dm_002_GS_3.01
Adh MAGPIE gene 63943 64092 . + 0 MAGPIE_ID "dm_002_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 65857 65896 . - 1 MAGPIE_ID "dm_002_GS_dna_3"
Adh MAGPIE promotor 67561 67600 . + 0 MAGPIE_ID "dm_002_GS_dna_4"
Adh MAGPIE exon 68350 68442 0.758 + 0 MAGPIE_ID "dm_002_GS_dna_4" #dm_002_GS_4.01
Adh MAGPIE exon 68712 68900 0.807 + 2 MAGPIE_ID "dm_002_GS_dna_4" #dm_002_GS_4.02
Adh MAGPIE exon 69241 69426 0.415 + 0 MAGPIE_ID "dm_002_GS_dna_4" #dm_002_GS_4.03
Adh calypso tandemrepeat 70833 70850 . + 2 MAGPIE_CTG "dm_002" # 3 x GATACA
Adh MAGPIE exon 71954 72014 0.793 + 1 MAGPIE_ID "dm_002_GS_dna_4" #dm_002_GS_4.04
Adh calypso tandemrepeat 72090 72105 . + 2 MAGPIE_CTG "dm_002" # 4 x ATAC
Adh calypso tandemrepeat 74562 74594 . + 2 MAGPIE_CTG "dm_002" # 11 x AAT
Adh calypso tandemrepeat 76467 76486 . + 2 MAGPIE_CTG "dm_002" # 4 x CGAAT
Adh MAGPIE exon 77541 77842 0.710 + 2 MAGPIE_ID "dm_002_GS_dna_4" #dm_002_GS_4.05
Adh MAGPIE gene 68350 77842 . + 0 MAGPIE_ID "dm_002_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 77989 78006 . + 0 MAGPIE_CTG "dm_002" # 9 x TG
Adh MAGPIE polyA_signal 78470 78475 . + 1 MAGPIE_ID "dm_002_GS_dna_4"
Adh MAGPIE promotor 78643 78682 . + 0 MAGPIE_ID "dm_002_GS_dna_5"
Adh MAGPIE exon 80269 80583 0.878 + 0 MAGPIE_ID "dm_002_GS_dna_5" #dm_002_GS_5.01
Adh MAGPIE gene 80269 80583 . + 0 MAGPIE_ID "dm_002_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 80589 80594 . + 2 MAGPIE_ID "dm_002_GS_dna_5"
Adh MAGPIE polyA_signal 80728 80733 . - 2 MAGPIE_ID "dm_002_GS_dna_6"
Adh MAGPIE exon 81303 81425 0.207 - 0 MAGPIE_ID "dm_002_GS_dna_6" #dm_002_GS_6.03
Adh calypso tandemrepeat 82238 82261 . + 1 MAGPIE_CTG "dm_002" # 4 x TATGTA
Adh calypso tandemrepeat 83275 83290 . + 0 MAGPIE_CTG "dm_002" # 4 x CAGA
Adh calypso tandemrepeat 85957 85974 . + 0 MAGPIE_CTG "dm_002" # 6 x GCA
Adh MAGPIE exon 86763 86944 0.691 - 1 MAGPIE_ID "dm_002_GS_dna_6" #dm_002_GS_6.02
Adh MAGPIE exon 87195 87255 0.774 - 2 MAGPIE_ID "dm_002_GS_dna_6" #dm_002_GS_6.01
Adh MAGPIE gene 81303 87255 . + 2 MAGPIE_ID "dm_002_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 88780 88819 . - 1 MAGPIE_ID "dm_002_GS_dna_6"
Adh MAGPIE polyA_signal 88973 88978 . - 1 MAGPIE_ID "dm_002_GS_dna_7"
Adh MAGPIE exon 90015 90612 0.072 - 2 MAGPIE_ID "dm_003_GS_dna_1" #dm_003_GS_1.02
Adh MAGPIE exon 89305 90666 0.555 - 2 MAGPIE_ID "dm_002_GS_dna_7" #dm_002_GS_7.01
Adh MAGPIE gene 89305 90666 1 + 0 MAGPIE_ID "dm_002_GS_dna_7" # DE putative inorganic phosphate cotransporter;ST putative;TY single function;
Adh MAGPIE promotor 90986 91025 . - 0 MAGPIE_ID "dm_002_GS_dna_7"
Adh MAGPIE polyA_signal 91176 91181 . - 0 MAGPIE_ID "dm_002_GS_dna_8"
Adh calypso tandemrepeat 91308 91322 . + 2 MAGPIE_CTG "dm_002" # 5 x TCG
Adh calypso tandemrepeat 91308 91322 . + 2 MAGPIE_CTG "dm_003" # 5 x TCG
Adh MAGPIE exon 91283 91459 0.027 - 1 MAGPIE_ID "dm_003_GS_dna_1" #dm_003_GS_1.01
Adh MAGPIE gene 90015 91459 . + 2 MAGPIE_ID "dm_003_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;CC No homologues picked up in drosophila;
Adh MAGPIE exon 91265 91476 0.141 - 2 MAGPIE_ID "dm_002_GS_dna_8" #dm_002_GS_8.02
Adh calypso tandemrepeat 91725 91739 . + 2 MAGPIE_CTG "dm_002" # 3 x TGGTT
Adh calypso tandemrepeat 91725 91739 . + 2 MAGPIE_CTG "dm_003" # 3 x TGGTT
Adh MAGPIE promotor 92375 92414 . - 0 MAGPIE_ID "dm_003_GS_dna_1"
Adh MAGPIE exon 92557 92587 0.141 - 1 MAGPIE_ID "dm_002_GS_dna_8" #dm_002_GS_8.01
Adh MAGPIE gene 91265 92587 . + 1 MAGPIE_ID "dm_002_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 92726 92731 . - 1 MAGPIE_ID "dm_003_GS_dna_2"
Adh MAGPIE promotor 92784 92823 . - 2 MAGPIE_ID "dm_002_GS_dna_8"
Adh MAGPIE polyA_signal 92873 92878 . - 1 MAGPIE_ID "dm_002_GS_dna_9"
Adh calypso tandemrepeat 92979 93003 . + 2 MAGPIE_CTG "dm_002" # 25 x T
Adh calypso tandemrepeat 92979 93003 . + 2 MAGPIE_CTG "dm_003" # 25 x T
Adh MAGPIE exon 93123 93999 0.955 - 2 MAGPIE_ID "dm_003_GS_dna_2" #dm_003_GS_2.02
Adh MAGPIE exon 93123 94111 0.702 - 1 MAGPIE_ID "dm_002_GS_dna_9" #dm_002_GS_9.01
Adh MAGPIE gene 93123 94111 1 + 2 MAGPIE_ID "dm_002_GS_dna_9" # DE rna-directed DNA polymerase (916 aa);ST putative;TY single function;CC Close match to ORF. Transposon?;
Adh tblastx similarity 93552 94111 . - 1 MAGPIE_CTG "dm_003" #Drosophila melanogaster F element 12, 5' end
Adh MAGPIE exon 94266 94333 0.960 - 1 MAGPIE_ID "dm_003_GS_dna_2" #dm_003_GS_2.01
Adh MAGPIE gene 93123 94333 1 + 2 MAGPIE_ID "dm_003_GS_dna_2" # DE rna-directed DNA polymerase (916 aa);ST putative;TY single function;CC Not a great match;
Adh MAGPIE promotor 94786 94825 . - 1 MAGPIE_ID "dm_003_GS_dna_2"
Adh MAGPIE polyA_signal 95296 95301 . - 2 MAGPIE_ID "dm_003_GS_dna_3"
Adh MAGPIE exon 95428 95781 0.964 - 2 MAGPIE_ID "dm_003_GS_dna_3" #dm_003_GS_3.01
Adh MAGPIE gene 95428 95781 . + 0 MAGPIE_ID "dm_003_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 95927 95966 . - 0 MAGPIE_ID "dm_003_GS_dna_3"
Adh MAGPIE promotor 96076 96115 . + 0 MAGPIE_ID "dm_003_GS_dna_4"
Adh calypso tandemrepeat 96698 96717 . + 1 MAGPIE_CTG "dm_003" # 10 x TG
Adh calypso tandemrepeat 98583 98601 . + 2 MAGPIE_CTG "dm_003" # 19 x T
Adh MAGPIE exon 99793 100027 0.813 + 0 MAGPIE_ID "dm_003_GS_dna_4" #dm_003_GS_4.01
Adh calypso tandemrepeat 100384 100401 . + 0 MAGPIE_CTG "dm_003" # 18 x A
Adh calypso tandemrepeat 101289 101308 . + 2 MAGPIE_CTG "dm_003" # 20 x A
Adh MAGPIE exon 101565 101657 0.977 + 2 MAGPIE_ID "dm_003_GS_dna_4" #dm_003_GS_4.02
Adh calypso tandemrepeat 103257 103271 . + 2 MAGPIE_CTG "dm_003" # 3 x CTGGT
Adh MAGPIE CDS 103543 103739 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 103739 103740 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE exon 103543 103769 0.927 + 0 MAGPIE_ID "dm_003_GS_dna_4" #dm_003_GS_4.03
Adh MAGPIE splice3 103807 103808 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh calypso tandemrepeat 104183 104197 . + 1 MAGPIE_CTG "dm_003" # 5 x TCG
Adh MAGPIE CDS 103808 104330 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE exon 103808 104330 0.967 + 1 MAGPIE_ID "dm_003_GS_dna_4" #dm_003_GS_4.04
Adh MAGPIE splice5 104330 104331 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE exon 105304 105467 0.751 + 0 MAGPIE_ID "dm_003_GS_dna_4" #dm_003_GS_4.05
Adh MAGPIE gene 99793 105467 1 + 0 MAGPIE_ID "dm_003_GS_dna_4" # GN kuzbanian;FC Proteases;DE kuzbanian;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 106480 106485 . + 0 MAGPIE_ID "dm_003_GS_dna_4"
Adh MAGPIE polyA_signal 106507 106512 . - 2 MAGPIE_ID "dm_003_GS_dna_5"
Adh MAGPIE exon 107859 108115 0.004 - 1 MAGPIE_ID "dm_003_GS_dna_5" #dm_003_GS_5.03
Adh calypso tandemrepeat 108993 109008 . + 2 MAGPIE_CTG "dm_003" # 16 x A
Adh calypso tandemrepeat 109140 109174 . + 2 MAGPIE_CTG "dm_003" # 7 x TATAT
Adh calypso tandemrepeat 111964 111978 . + 0 MAGPIE_CTG "dm_003" # 5 x CAT
Adh MAGPIE exon 111958 111988 0.039 - 1 MAGPIE_ID "dm_003_GS_dna_5" #dm_003_GS_5.02
Adh MAGPIE exon 112147 112308 0.050 - 2 MAGPIE_ID "dm_003_GS_dna_5" #dm_003_GS_5.01
Adh MAGPIE gene 107859 112308 . + 2 MAGPIE_ID "dm_003_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 112496 112535 . - 0 MAGPIE_ID "dm_003_GS_dna_5"
Adh MAGPIE promotor 112588 112627 . + 0 MAGPIE_ID "dm_003_GS_dna_6"
Adh MAGPIE exon 112955 113016 0.810 + 1 MAGPIE_ID "dm_003_GS_dna_6" #dm_003_GS_6.01
Adh MAGPIE exon 113132 113493 0.007 + 1 MAGPIE_ID "dm_003_GS_dna_6" #dm_003_GS_6.02
Adh MAGPIE exon 117406 117527 0.004 + 0 MAGPIE_ID "dm_003_GS_dna_6" #dm_003_GS_6.03
Adh MAGPIE gene 112955 117527 . + 1 MAGPIE_ID "dm_003_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 117925 117930 . + 0 MAGPIE_ID "dm_003_GS_dna_6"
Adh MAGPIE promotor 118030 118069 . + 0 MAGPIE_ID "dm_003_GS_dna_7"
Adh MAGPIE exon 118375 118425 0.035 + 0 MAGPIE_ID "dm_003_GS_dna_7" #dm_003_GS_7.01
Adh reputer repeat 120792 120922 . + . REPEAT "80" # maximal forward repeat
Adh reputer repeat 120984 121113 . + . REPEAT "74" # maximal forward repeat
Adh reputer repeat 121125 121255 . + . REPEAT "80" # maximal forward repeat
Adh reputer repeat 121319 121448 . + . REPEAT "74" # maximal forward repeat
Adh MAGPIE exon 121666 121846 0.846 + 0 MAGPIE_ID "dm_003_GS_dna_7" #dm_003_GS_7.02
Adh MAGPIE exon 121957 122121 0.602 + 0 MAGPIE_ID "dm_003_GS_dna_7" #dm_003_GS_7.03
Adh MAGPIE exon 122214 122449 0.725 + 2 MAGPIE_ID "dm_003_GS_dna_7" #dm_003_GS_7.04
Adh MAGPIE gene 118375 122449 . + 0 MAGPIE_ID "dm_003_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 122836 122841 . + 0 MAGPIE_ID "dm_003_GS_dna_7"
Adh MAGPIE promotor 123697 123736 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 124457 124458 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 124458 124936 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 124936 124937 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh calypso tandemrepeat 126718 126732 . + 0 MAGPIE_CTG "dm_003" # 3 x TGGAT
Adh MAGPIE splice3 127145 127146 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 127146 127292 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 127292 127293 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 127770 127771 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 127771 127931 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 127931 127932 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 127990 127991 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 127991 128225 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 128225 128226 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 128295 128296 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 128296 129342 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 129342 129343 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 129400 129401 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 129401 129965 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice5 129965 129966 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE splice3 130135 130136 . + 0 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE CDS 130136 130401 . + 1 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE gene 103543 130401 1 + 0 MAGPIE_ID "dm_003_MP_dna_8" # GN kuzbanian;DE kuzbanian;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 130881 130886 . + 2 MAGPIE_ID "dm_003_MP_dna_8"
Adh MAGPIE polyA_signal 130951 130956 . - 2 MAGPIE_ID "dm_003_GS_dna_9"
Adh calypso tandemrepeat 131119 131136 . + 0 MAGPIE_CTG "dm_003" # 6 x GCA
Adh MAGPIE exon 131070 131190 0.126 - 2 MAGPIE_ID "dm_003_GS_dna_9" #dm_003_GS_9.03
Adh MAGPIE exon 133612 134233 0.884 - 1 MAGPIE_ID "dm_003_GS_dna_9" #dm_003_GS_9.02
Adh MAGPIE exon 134862 134967 0.696 - 2 MAGPIE_ID "dm_003_GS_dna_9" #dm_003_GS_9.01
Adh MAGPIE gene 131070 134967 1 + 2 MAGPIE_ID "dm_003_GS_dna_9" # DE RAS suppressor protein (277 aa);ST putative;TY single function;CC No strong match in Drosophila;
Adh MAGPIE polyA_signal 135087 135092 . - 0 MAGPIE_ID "dm_004_GS_dna_1"
Adh MAGPIE promotor 135290 135329 . - 0 MAGPIE_ID "dm_003_GS_dna_9"
Adh MAGPIE exon 136104 136281 0.648 - 2 MAGPIE_ID "dm_003_GS_dna_10" #dm_003_GS_10.03
Adh MAGPIE exon 136104 136281 0.731 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.11
Adh calypso tandemrepeat 137480 137497 . + 1 MAGPIE_CTG "dm_003" # 18 x T
Adh calypso tandemrepeat 137480 137497 . + 1 MAGPIE_CTG "dm_004" # 18 x T
Adh calypso tandemrepeat 137594 137608 . + 1 MAGPIE_CTG "dm_003" # 5 x AAC
Adh calypso tandemrepeat 137594 137608 . + 1 MAGPIE_CTG "dm_004" # 5 x AAC
Adh calypso tandemrepeat 137931 137945 . + 2 MAGPIE_CTG "dm_003" # 3 x ATTGT
Adh calypso tandemrepeat 137931 137945 . + 2 MAGPIE_CTG "dm_004" # 3 x ATTGT
Adh MAGPIE exon 138453 138531 0.464 - 2 MAGPIE_ID "dm_003_GS_dna_10" #dm_003_GS_10.02
Adh MAGPIE exon 138627 138669 0.289 - 2 MAGPIE_ID "dm_003_GS_dna_10" #dm_003_GS_10.01
Adh MAGPIE gene 136104 138669 1 + 2 MAGPIE_ID "dm_003_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 140355 140616 0.247 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.10
Adh reputer repeat 140521 142045 . + . REPEAT "59" # maximal forward repeat
Adh reputer repeat 142046 142791 . + . REPEAT "39" # maximal forward repeat
Adh reputer repeat 143004 143062 . + . REPEAT "65" # maximal forward repeat
Adh reputer repeat 143166 143279 . + . REPEAT "9" # maximal forward repeat
Adh MAGPIE exon 143066 143297 0.400 - 0 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.09
Adh MAGPIE exon 143302 143409 0.315 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.08
Adh reputer repeat 143291 143560 . + . REPEAT "6" # maximal forward repeat
Adh calypso tandemrepeat 143823 143842 . + 2 MAGPIE_CTG "dm_004" # 10 x AC
Adh MAGPIE exon 144051 144192 0.543 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.07
Adh MAGPIE exon 146836 146932 0.042 - 1 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.06
Adh reputer repeat 143559 149564 . + . REPEAT "88" # maximal forward repeat
Adh reputer repeat 149571 151095 . + . REPEAT "59" # maximal forward repeat
Adh reputer repeat 151095 151840 . + . REPEAT "39" # maximal forward repeat
Adh reputer repeat 152052 152110 . + . REPEAT "65" # maximal forward repeat
Adh reputer repeat 152214 152327 . + . REPEAT "9" # maximal forward repeat
Adh MAGPIE exon 152102 152345 0.001 - 0 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.05
Adh MAGPIE exon 152350 152457 0.575 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.04
Adh reputer repeat 152339 152608 . + . REPEAT "6" # maximal forward repeat
Adh calypso tandemrepeat 152870 152889 . + 1 MAGPIE_CTG "dm_004" # 10 x AC
Adh MAGPIE exon 153098 153239 0.842 - 0 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.03
Adh MAGPIE exon 155883 155979 0.109 - 2 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.02
Adh MAGPIE exon 156071 156188 0.046 - 0 MAGPIE_ID "dm_004_GS_dna_1" #dm_004_GS_1.01
Adh MAGPIE gene 136104 156188 . - 0 MAGPIE_ID "dm_004_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 157266 157305 . - 2 MAGPIE_ID "dm_004_GS_dna_1"
Adh MAGPIE promotor 158506 158545 . + 0 MAGPIE_ID "dm_004_GS_dna_2"
Adh reputer repeat 152606 158611 . + . REPEAT "88" # maximal forward repeat
Adh MAGPIE exon 159578 160022 0.794 + 1 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.01
Adh MAGPIE exon 161268 161449 0.592 + 2 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.02
Adh MAGPIE exon 161727 162105 0.962 + 2 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.03
Adh MAGPIE exon 162442 162557 0.978 + 0 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.04
Adh MAGPIE exon 162616 163137 0.986 + 0 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.05
Adh MAGPIE exon 164190 164417 0.167 + 2 MAGPIE_ID "dm_004_GS_dna_2" #dm_004_GS_2.06
Adh MAGPIE gene 159578 164417 1 - 0 MAGPIE_ID "dm_004_GS_dna_2" # DE C26B9.1 gene product from C.elegans;ST putative;TY single function;CC No good Drosophila matches. missing 1-436 of matching protein;
Adh MAGPIE polyA_signal 165044 165049 . + 1 MAGPIE_ID "dm_004_GS_dna_2"
Adh MAGPIE polyA_signal 165102 165107 . - 0 MAGPIE_ID "dm_004_GS_dna_3"
Adh calypso tandemrepeat 166341 166360 . + 2 MAGPIE_CTG "dm_004" # 5 x CAAA
Adh calypso tandemrepeat 167926 167943 . + 0 MAGPIE_CTG "dm_004" # 9 x CA
Adh MAGPIE exon 168736 168874 0.931 - 1 MAGPIE_ID "dm_004_GS_dna_3" #dm_004_GS_3.02
Adh MAGPIE exon 170448 170530 0.601 - 1 MAGPIE_ID "dm_004_GS_dna_3" #dm_004_GS_3.01
Adh MAGPIE gene 168736 170530 . - 1 MAGPIE_ID "dm_004_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 171036 171075 . - 2 MAGPIE_ID "dm_004_GS_dna_3"
Adh MAGPIE polyA_signal 171089 171094 . - 1 MAGPIE_ID "dm_004_GS_dna_4"
Adh calypso tandemrepeat 172510 172524 . + 0 MAGPIE_CTG "dm_004" # 5 x TGT
Adh MAGPIE exon 172106 172869 0.925 - 2 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.10
Adh MAGPIE exon 177956 178015 0.991 - 1 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.09
Adh MAGPIE exon 178136 178300 0.593 - 1 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.08
Adh MAGPIE exon 179847 179900 0.356 - 0 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.07
Adh MAGPIE exon 181272 181409 0.100 - 0 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.07
Adh MAGPIE exon 181272 181409 0.681 - 0 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.06
Adh calypso tandemrepeat 182041 182056 . + 0 MAGPIE_CTG "dm_004" # 4 x ACAA
Adh calypso tandemrepeat 182041 182056 . + 0 MAGPIE_CTG "dm_005" # 4 x ACAA
Adh MAGPIE exon 183107 183235 0.361 - 1 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.06
Adh MAGPIE exon 183107 183235 0.945 - 1 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.05
Adh MAGPIE exon 183341 183496 0.764 - 1 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.05
Adh MAGPIE exon 183341 183496 0.880 - 1 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.04
Adh MAGPIE exon 183596 183635 0.862 - 0 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.04
Adh MAGPIE exon 183596 183635 0.878 - 0 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.03
Adh MAGPIE exon 183835 184040 0.962 - 0 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.02
Adh MAGPIE exon 183835 184040 0.963 - 0 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.03
Adh MAGPIE exon 184241 184282 0.902 - 1 MAGPIE_ID "dm_004_GS_dna_4" #dm_004_GS_4.01
Adh MAGPIE exon 184241 184282 0.945 - 1 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.02
Adh MAGPIE gene 172106 184282 2 - 1 MAGPIE_ID "dm_004_GS_dna_4" # DE lachesin precursor (359 aa);ST putative;TY single function;CC First part of the protein matches lachesin precursor, not good enough to strictly identify missing/extra exons, but in Drosophila;
Adh MAGPIE exon 185558 185615 0.909 - 0 MAGPIE_ID "dm_005_GS_dna_1" #dm_005_GS_1.01
Adh MAGPIE gene 181272 185615 2 + 2 MAGPIE_ID "dm_005_GS_dna_1" # DE lachesin precursor (359 aa);ST putative;TY single function;CC Matches middle of lachesin precursor; not strong enough to identify missing/extra exons;
Adh MAGPIE promotor 186857 186896 . - 0 MAGPIE_ID "dm_005_GS_dna_1"
Adh MAGPIE promotor 190776 190815 . + 2 MAGPIE_ID "dm_005_GS_dna_2"
Adh calypso tandemrepeat 192791 192808 . + 1 MAGPIE_CTG "dm_005" # 3 x AATGGT
Adh MAGPIE exon 193180 193242 0.921 + 0 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.01
Adh MAGPIE exon 194030 194254 0.857 + 1 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.02
Adh MAGPIE exon 194916 195252 0.380 + 2 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.03
Adh MAGPIE exon 196995 197159 0.039 + 2 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.04
Adh calypso tandemrepeat 200058 200084 . + 2 MAGPIE_CTG "dm_005" # 9 x ACA
Adh calypso tandemrepeat 200215 200230 . + 0 MAGPIE_CTG "dm_005" # 16 x A
Adh MAGPIE exon 201578 201633 0.054 + 1 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.05
Adh MAGPIE exon 202116 202646 0.118 + 2 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.06
Adh MAGPIE exon 202700 204199 0.870 + 1 MAGPIE_ID "dm_005_GS_dna_2" #dm_005_GS_2.07
Adh MAGPIE gene 193180 204199 1 + 0 MAGPIE_ID "dm_005_GS_dna_2" # DE glycerol-3-phosphate dehydrogenase;ST putative;TY single function;CC Second half matches glycerol-3-phosphate dehydrogenase; extra exons? No strong match in Drosophila;
Adh MAGPIE polyA_signal 204311 204316 . + 1 MAGPIE_ID "dm_005_GS_dna_2"
Adh MAGPIE polyA_signal 204344 204349 . - 1 MAGPIE_ID "dm_005_GS_dna_3"
Adh MAGPIE exon 204792 204915 0.037 - 2 MAGPIE_ID "dm_005_GS_dna_3" #dm_005_GS_3.04
Adh MAGPIE exon 205449 205575 0.031 - 2 MAGPIE_ID "dm_005_GS_dna_3" #dm_005_GS_3.03
Adh calypso tandemrepeat 207660 207675 . + 2 MAGPIE_CTG "dm_005" # 4 x TCAA
Adh MAGPIE exon 207724 207826 0.013 - 1 MAGPIE_ID "dm_005_GS_dna_3" #dm_005_GS_3.02
Adh calypso tandemrepeat 209347 209361 . + 0 MAGPIE_CTG "dm_005" # 15 x T
Adh MAGPIE exon 210864 211181 0.179 - 0 MAGPIE_ID "dm_005_GS_dna_3" #dm_005_GS_3.01
Adh MAGPIE gene 204792 211181 . + 2 MAGPIE_ID "dm_005_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 211350 211389 . - 2 MAGPIE_ID "dm_005_GS_dna_3"
Adh calypso tandemrepeat 212843 212857 . + 1 MAGPIE_CTG "dm_005" # 5 x TTA
Adh MAGPIE polyA_signal 213056 213061 . - 1 MAGPIE_ID "dm_005_GS_dna_4"
Adh MAGPIE exon 213507 213602 0.841 - 0 MAGPIE_ID "dm_005_GS_dna_4" #dm_005_GS_4.03
Adh calypso tandemrepeat 214781 214798 . + 1 MAGPIE_CTG "dm_005" # 3 x GGGCAT
Adh MAGPIE exon 216171 216761 0.206 - 0 MAGPIE_ID "dm_005_GS_dna_4" #dm_005_GS_4.02
Adh MAGPIE exon 216820 217188 0.957 - 2 MAGPIE_ID "dm_005_GS_dna_4" #dm_005_GS_4.01
Adh MAGPIE gene 213507 217188 1 + 2 MAGPIE_ID "dm_005_GS_dna_4" # DE hypothetical sbbi03 protein;ST putative;TY single function;CC No strong match in Drosophila;
Adh MAGPIE promotor 218833 218872 . - 1 MAGPIE_ID "dm_005_GS_dna_4"
Adh MAGPIE promotor 220064 220103 . + 1 MAGPIE_ID "dm_005_GS_dna_5"
Adh MAGPIE exon 220838 220908 0.748 + 1 MAGPIE_ID "dm_005_GS_dna_5" #dm_005_GS_5.01
Adh MAGPIE exon 222807 222985 0.397 + 2 MAGPIE_ID "dm_005_GS_dna_5" #dm_005_GS_5.02
Adh MAGPIE exon 224046 224203 0.999 + 2 MAGPIE_ID "dm_005_GS_dna_5" #dm_005_GS_5.03
Adh MAGPIE gene 220838 224203 . + 1 MAGPIE_ID "dm_005_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 224240 224245 . + 1 MAGPIE_ID "dm_005_GS_dna_5"
Adh calypso tandemrepeat 224959 224973 . + 0 MAGPIE_CTG "dm_005" # 3 x AATTA
Adh MAGPIE promotor 225295 225334 . + 0 MAGPIE_ID "dm_005_GS_dna_6"
Adh MAGPIE promotor 225295 225334 . + 0 MAGPIE_ID "dm_006_GS_dna_1"
Adh calypso tandemrepeat 227156 227170 . + 1 MAGPIE_CTG "dm_005" # 5 x GCT
Adh calypso tandemrepeat 227156 227170 . + 1 MAGPIE_CTG "dm_006" # 5 x GCT
Adh MAGPIE exon 227121 227312 0.522 + 2 MAGPIE_ID "dm_005_GS_dna_6" #dm_005_GS_6.01
Adh MAGPIE exon 227121 227312 0.662 + 2 MAGPIE_ID "dm_006_GS_dna_1" #dm_006_GS_1.01
Adh MAGPIE exon 227793 227992 0.291 + 2 MAGPIE_ID "dm_005_GS_dna_6" #dm_005_GS_6.02
Adh MAGPIE exon 227793 227992 0.475 + 2 MAGPIE_ID "dm_006_GS_dna_1" #dm_006_GS_1.02
Adh MAGPIE exon 228443 228602 0.108 + 1 MAGPIE_ID "dm_005_GS_dna_6" #dm_005_GS_6.03
Adh MAGPIE gene 227121 228602 . + 2 MAGPIE_ID "dm_005_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 228820 228825 . + 0 MAGPIE_ID "dm_005_GS_dna_6"
Adh MAGPIE exon 229661 230462 0.377 + 1 MAGPIE_ID "dm_006_GS_dna_1" #dm_006_GS_1.03
Adh MAGPIE gene 227121 230462 . - 0 MAGPIE_ID "dm_006_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 230522 230527 . + 1 MAGPIE_ID "dm_006_GS_dna_1"
Adh MAGPIE polyA_signal 230559 230564 . - 0 MAGPIE_ID "dm_006_GS_dna_2"
Adh calypso tandemrepeat 231257 231274 . + 1 MAGPIE_CTG "dm_006" # 3 x TCTTGG
Adh MAGPIE exon 230985 231322 0.959 - 1 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.07
Adh MAGPIE exon 231417 231549 0.047 - 2 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.06
Adh calypso tandemrepeat 233834 233848 . + 1 MAGPIE_CTG "dm_006" # 5 x TAT
Adh calypso tandemrepeat 234017 234031 . + 1 MAGPIE_CTG "dm_006" # 3 x GGCGA
Adh calypso tandemrepeat 234438 234455 . + 2 MAGPIE_CTG "dm_006" # 3 x TCACAT
Adh MAGPIE exon 234442 234563 0.120 - 0 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.05
Adh MAGPIE exon 235723 235990 0.215 - 1 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.04
Adh MAGPIE exon 236859 236980 0.283 - 1 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.03
Adh MAGPIE exon 237092 237123 0.436 - 2 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.02
Adh calypso tandemrepeat 238711 238725 . + 0 MAGPIE_CTG "dm_006" # 5 x TGC
Adh MAGPIE exon 239944 240152 0.172 - 0 MAGPIE_ID "dm_006_GS_dna_2" #dm_006_GS_2.01
Adh MAGPIE gene 230985 240152 . - 0 MAGPIE_ID "dm_006_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 241635 241674 . - 2 MAGPIE_ID "dm_006_GS_dna_2"
Adh calypso tandemrepeat 242300 242318 . + 1 MAGPIE_CTG "dm_006" # 19 x A
Adh calypso tandemrepeat 242376 242393 . + 2 MAGPIE_CTG "dm_006" # 9 x CA
Adh MAGPIE polyA_signal 242952 242957 . - 0 MAGPIE_ID "dm_006_GS_dna_3"
Adh MAGPIE exon 243341 243540 0.971 - 2 MAGPIE_ID "dm_006_GS_dna_3" #dm_006_GS_3.02
Adh calypso tandemrepeat 243709 243724 . + 0 MAGPIE_CTG "dm_006" # 16 x A
Adh MAGPIE exon 244604 244871 0.971 - 0 MAGPIE_ID "dm_006_GS_dna_3" #dm_006_GS_3.01
Adh MAGPIE gene 243341 244871 . - 0 MAGPIE_ID "dm_006_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 245669 245708 . - 0 MAGPIE_ID "dm_006_GS_dna_3"
Adh MAGPIE promotor 245802 245841 . + 2 MAGPIE_ID "dm_006_GS_dna_4"
Adh MAGPIE exon 246894 246946 0.949 + 2 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.01
Adh calypso tandemrepeat 248282 248296 . + 1 MAGPIE_CTG "dm_006" # 5 x GAT
Adh MAGPIE exon 248230 248471 0.948 + 0 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.02
Adh MAGPIE exon 249380 249471 0.347 + 1 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.03
Adh calypso tandemrepeat 251018 251035 . + 1 MAGPIE_CTG "dm_006" # 3 x AGATAC
Adh calypso tandemrepeat 254583 254598 . + 2 MAGPIE_CTG "dm_006" # 8 x TA
Adh calypso tandemrepeat 255611 255633 . + 1 MAGPIE_CTG "dm_006" # 23 x T
Adh reputer repeat 255663 255743 . + . REPEAT "41" # maximal forward repeat
Adh reputer repeat 255734 255864 . + . REPEAT "93" # maximal forward repeat
Adh reputer repeat 255866 255983 . + . REPEAT "60" # maximal forward repeat
Adh reputer repeat 256028 256209 . + . REPEAT "31" # maximal forward repeat
Adh reputer repeat 256211 256404 . + . REPEAT "36" # maximal forward repeat
Adh reputer repeat 256406 256658 . + . REPEAT "47" # maximal forward repeat
Adh MAGPIE exon 258809 258883 0.005 + 1 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.04
Adh calypso tandemrepeat 259848 259863 . + 2 MAGPIE_CTG "dm_006" # 4 x TATG
Adh MAGPIE exon 265088 266322 0.898 + 1 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.05
Adh calypso tandemrepeat 266340 266354 . + 2 MAGPIE_CTG "dm_006" # 3 x ATATA
Adh MAGPIE exon 266392 266619 0.963 + 0 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.06
Adh MAGPIE exon 266684 266867 0.935 + 1 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.07
Adh blastx similarity 266905 267231 0.0 + 0 MAGPIE_CTG "dm_006" #Similar to S.cerevisiae EMP70 protein precursor (S25110) [Homo sapiens]
Adh MAGPIE exon 267912 268061 0.976 + 2 MAGPIE_ID "dm_006_GS_dna_4" #dm_006_GS_4.08
Adh MAGPIE gene 246894 268061 1 - 0 MAGPIE_ID "dm_006_GS_dna_4" # DE unknown protein;ST putative;TY single function;CC No strong matches in Drosophila;
Adh MAGPIE polyA_signal 268167 268172 . + 2 MAGPIE_ID "dm_006_GS_dna_4"
Adh MAGPIE polyA_signal 268400 268405 . - 1 MAGPIE_ID "dm_006_GS_dna_5"
Adh MAGPIE exon 268982 269157 0.662 - 2 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.07
Adh MAGPIE exon 269222 269541 0.793 - 2 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.06
Adh MAGPIE exon 269629 269907 0.986 - 2 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.05
Adh calypso tandemrepeat 270098 270115 . + 1 MAGPIE_CTG "dm_006" # 9 x TG
Adh calypso tandemrepeat 270098 270115 . + 1 MAGPIE_CTG "dm_007" # 9 x TG
Adh calypso tandemrepeat 271285 271308 . + 0 MAGPIE_CTG "dm_006" # 8 x CTG
Adh calypso tandemrepeat 271285 271308 . + 0 MAGPIE_CTG "dm_007" # 8 x CTG
Adh calypso tandemrepeat 271412 271426 . + 1 MAGPIE_CTG "dm_006" # 3 x GCACA
Adh calypso tandemrepeat 271412 271426 . + 1 MAGPIE_CTG "dm_007" # 3 x GCACA
Adh MAGPIE exon 271224 271433 0.031 - 0 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.04
Adh MAGPIE exon 271247 271438 0.347 + 1 MAGPIE_ID "dm_007_GS_dna_1" #dm_007_GS_1.01
Adh MAGPIE exon 271499 271573 0.337 - 1 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.03
Adh MAGPIE exon 272173 272256 0.460 + 0 MAGPIE_ID "dm_007_GS_dna_1" #dm_007_GS_1.02
Adh MAGPIE exon 273396 273575 0.426 - 0 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.02
Adh MAGPIE exon 274362 274480 0.334 + 2 MAGPIE_ID "dm_007_GS_dna_1" #dm_007_GS_1.03
Adh MAGPIE gene 271247 274480 . + 1 MAGPIE_ID "dm_007_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 274499 274504 . + 1 MAGPIE_ID "dm_007_GS_dna_1"
Adh MAGPIE promotor 274679 274718 . + 1 MAGPIE_ID "dm_007_MP_dna_2"
Adh MAGPIE start_codon 274751 274753 . + 1 MAGPIE_ID "dm_007_MP_dna_2"
Adh MAGPIE exon 274725 274953 0.338 - 2 MAGPIE_ID "dm_006_GS_dna_5" #dm_006_GS_5.01
Adh MAGPIE gene 268982 274953 2 - 2 MAGPIE_ID "dm_006_GS_dna_5" # DE stress-activated p38b MAP kinase;ST putative;TY single function;CC First half matches 1-67 aa of MAP kinase; DNA (dm_006_013) matches up to 83 aa of this protein, so there's a missing exon; complete match is found in dm_007_002 ;
Adh MAGPIE CDS 274751 275848 . + 1 MAGPIE_ID "dm_007_MP_dna_2"
Adh MAGPIE gene 274751 275848 1 + 1 MAGPIE_ID "dm_007_MP_dna_2" # GN Mpk2;EC 2.7.1.37;DE stress activated p38 MAP kinase;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 275961 275966 . + 2 MAGPIE_ID "dm_007_MP_dna_2"
Adh MAGPIE polyA_signal 275976 275981 . - 0 MAGPIE_ID "dm_007_GS_dna_3"
Adh MAGPIE exon 276361 276696 0.992 - 2 MAGPIE_ID "dm_007_GS_dna_3" #dm_007_GS_3.02
Adh MAGPIE exon 276748 277188 0.839 - 2 MAGPIE_ID "dm_007_GS_dna_3" #dm_007_GS_3.01
Adh MAGPIE gene 276361 277188 1 + 0 MAGPIE_ID "dm_007_GS_dna_3" # DE acid phosphatase (755 aa);ST putative;TY single function;CC No strong matches in Drosophila;
Adh MAGPIE promotor 277255 277294 . - 1 MAGPIE_ID "dm_007_GS_dna_3"
Adh MAGPIE promotor 277442 277481 . + 1 MAGPIE_ID "dm_007_GS_dna_4"
Adh MAGPIE exon 277921 278103 0.999 + 0 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.01
Adh MAGPIE exon 278222 278345 0.990 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.02
Adh MAGPIE exon 278537 278737 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.03
Adh MAGPIE exon 278802 279272 0.998 + 2 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.04
Adh MAGPIE exon 279548 279726 0.996 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.05
Adh MAGPIE exon 280031 280247 0.997 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.06
Adh MAGPIE exon 280310 280610 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.07
Adh MAGPIE exon 280674 280986 0.999 + 2 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.08
Adh MAGPIE exon 281051 281202 0.732 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.09
Adh MAGPIE exon 281264 281447 0.732 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.10
Adh MAGPIE exon 281550 281787 0.999 + 2 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.11
Adh MAGPIE exon 281848 282471 0.977 + 0 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.12
Adh MAGPIE exon 282539 283541 0.848 + 1 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.13
Adh MAGPIE exon 283608 284052 0.850 + 2 MAGPIE_ID "dm_007_GS_dna_4" #dm_007_GS_4.14
Adh MAGPIE gene 277921 284052 1 + 0 MAGPIE_ID "dm_007_GS_dna_4" # DE abc-c transporter;ST putative;TY single function;CC No strong match in Drosophila;
Adh MAGPIE polyA_signal 284191 284196 . + 0 MAGPIE_ID "dm_007_GS_dna_4"
Adh calypso tandemrepeat 284448 284462 . + 2 MAGPIE_CTG "dm_007" # 15 x T
Adh MAGPIE promotor 284461 284500 . + 0 MAGPIE_ID "dm_007_GS_dna_5"
Adh MAGPIE exon 284779 284915 0.830 + 0 MAGPIE_ID "dm_007_GS_dna_5" #dm_007_GS_5.01
Adh MAGPIE exon 284969 285346 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_5" #dm_007_GS_5.02
Adh MAGPIE exon 285416 286886 0.987 + 1 MAGPIE_ID "dm_007_GS_dna_5" #dm_007_GS_5.03
Adh MAGPIE gene 284779 286886 3 + 0 MAGPIE_ID "dm_007_GS_dna_5" # DE transposase (581 aa);ST putative;TY single function;CC No strong Drosophila match;
Adh MAGPIE polyA_signal 287082 287087 . + 2 MAGPIE_ID "dm_007_GS_dna_5"
Adh MAGPIE promotor 287170 287209 . + 0 MAGPIE_ID "dm_007_GS_dna_6"
Adh MAGPIE exon 287599 288379 0.986 + 0 MAGPIE_ID "dm_007_GS_dna_6" #dm_007_GS_6.01
Adh MAGPIE exon 288647 292689 0.998 + 1 MAGPIE_ID "dm_007_GS_dna_6" #dm_007_GS_6.02
Adh MAGPIE exon 292759 292896 0.941 + 0 MAGPIE_ID "dm_007_GS_dna_6" #dm_007_GS_6.03
Adh MAGPIE gene 287599 292896 1 + 0 MAGPIE_ID "dm_007_GS_dna_6" # DE sec7p;ST putative;TY single function;CC No strong match in Drosophila;
Adh calypso tandemrepeat 293149 293168 . + 0 MAGPIE_CTG "dm_007" # 10 x AT
Adh MAGPIE polyA_signal 293549 293554 . + 1 MAGPIE_ID "dm_007_GS_dna_6"
Adh MAGPIE promotor 297532 297571 . + 0 MAGPIE_ID "dm_007_GS_dna_7"
Adh MAGPIE exon 297680 297713 0.811 + 1 MAGPIE_ID "dm_007_GS_dna_7" #dm_007_GS_7.01
Adh calypso tandemrepeat 297736 297751 . + 0 MAGPIE_CTG "dm_007" # 4 x TTGT
Adh MAGPIE exon 302560 302718 0.994 + 0 MAGPIE_ID "dm_007_GS_dna_7" #dm_007_GS_7.02
Adh MAGPIE exon 302786 303405 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_7" #dm_007_GS_7.03
Adh MAGPIE gene 297680 303405 1 + 1 MAGPIE_ID "dm_007_GS_dna_7" # DE carbonate dehydratase;ST putative;TY single function;CC No strong matches in Drosophila;
Adh MAGPIE polyA_signal 303712 303717 . + 0 MAGPIE_ID "dm_007_GS_dna_7"
Adh MAGPIE polyA_signal 303807 303812 . - 0 MAGPIE_ID "dm_007_GS_dna_8"
Adh MAGPIE exon 303960 304272 0.999 - 2 MAGPIE_ID "dm_007_GS_dna_8" #dm_007_GS_8.02
Adh MAGPIE exon 304330 305201 0.999 - 0 MAGPIE_ID "dm_007_GS_dna_8" #dm_007_GS_8.01
Adh MAGPIE gene 303960 305201 2 + 2 MAGPIE_ID "dm_007_GS_dna_8" # DE hypothetical deaminase;ST putative;TY single function;CC No strong matches in Drosophila;
Adh MAGPIE promotor 305287 305326 . - 1 MAGPIE_ID "dm_007_GS_dna_8"
Adh MAGPIE promotor 305332 305371 . + 0 MAGPIE_ID "dm_007_GS_dna_9"
Adh MAGPIE exon 305396 305516 0.998 + 1 MAGPIE_ID "dm_007_GS_dna_9" #dm_007_GS_9.01
Adh MAGPIE exon 305577 305737 0.999 + 2 MAGPIE_ID "dm_007_GS_dna_9" #dm_007_GS_9.02
Adh MAGPIE exon 305803 306108 0.999 + 0 MAGPIE_ID "dm_007_GS_dna_9" #dm_007_GS_9.03
Adh MAGPIE exon 306230 306385 0.218 + 1 MAGPIE_ID "dm_007_GS_dna_9" #dm_007_GS_9.04
Adh MAGPIE gene 305396 306385 2 + 1 MAGPIE_ID "dm_007_GS_dna_9" # DE EST aa085966 - human (81 aa);ST putative;TY single function;CC end of this cDNA matches beginning of human EST (strong); No matches in Drosophila;
Adh MAGPIE polyA_signal 306413 306418 . + 1 MAGPIE_ID "dm_007_GS_dna_9"
Adh calypso tandemrepeat 307350 307367 . + 2 MAGPIE_CTG "dm_007" # 3 x TATAAA
Adh MAGPIE start_codon 307965 307967 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 307965 309056 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 309056 309057 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 309109 309110 . + 0 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 309110 309467 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 309467 309468 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 309529 309530 . + 0 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 309530 310452 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 310452 310453 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 310516 310517 . + 0 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 310517 311365 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 311365 311366 . + 0 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 311427 311428 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 311428 312318 . + 0 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 312318 312319 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 312386 312387 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh calypso tandemrepeat 312806 312823 . + 1 MAGPIE_CTG "dm_007" # 6 x GCA
Adh MAGPIE CDS 312387 313020 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice5 313020 313021 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE splice3 313085 313086 . + 1 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE CDS 313086 313129 . + 2 MAGPIE_ID "dm_007_MP_dna_10"
Adh MAGPIE gene 307965 313129 1 + 2 MAGPIE_ID "dm_007_MP_dna_10" # GN Son of sevenless;DE Son of sevenless, guanine nucleotide exchange factor;ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 313243 313260 . + 0 MAGPIE_CTG "dm_007" # 9 x AT
Adh calypso tandemrepeat 314920 314937 . + 0 MAGPIE_CTG "dm_007" # 3 x TTCGGA
Adh MAGPIE start_codon 315138 315140 . + 2 MAGPIE_ID "dm_008_MP_dna_1"
Adh calypso tandemrepeat 315342 315359 . + 2 MAGPIE_CTG "dm_007" # 6 x AAT
Adh calypso tandemrepeat 315342 315359 . + 2 MAGPIE_CTG "dm_008" # 6 x AAT
Adh MAGPIE CDS 315138 315899 . + 2 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE exon 315138 315899 0.958 + 2 MAGPIE_ID "dm_007_GS_dna_11" #dm_007_GS_11.01
Adh MAGPIE splice5 315899 315900 . + 1 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE splice3 316432 316433 . + 0 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE CDS 316433 316800 . + 1 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE exon 316433 316800 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_11" #dm_007_GS_11.02
Adh MAGPIE splice5 316800 316801 . + 2 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE splice3 316864 316865 . + 0 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE CDS 316865 317462 . + 1 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE exon 316865 317462 0.999 + 1 MAGPIE_ID "dm_007_GS_dna_11" #dm_007_GS_11.03
Adh MAGPIE gene 315138 317462 1 + 2 MAGPIE_ID "dm_007_GS_dna_11" # GN Gad2;EC 4.1.1.15;DE glutamate decarboxylase 2;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE gene 315138 317462 1 + 2 MAGPIE_ID "dm_008_MP_dna_1" # GN Gad2;EC 4.1.1.15;DE glutamic acid decarboxylase 2;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE stop_codon 317460 317462 . + 2 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE polyA_signal 317646 317651 . + 2 MAGPIE_ID "dm_008_MP_dna_1"
Adh MAGPIE polyA_signal 317869 317874 . - 2 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE stop_codon 317891 317893 . - 1 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE CDS 317891 318548 . - 0 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE exon 317891 318548 0.994 - 0 MAGPIE_ID "dm_007_GS_dna_12" #dm_007_GS_12.03
Adh MAGPIE splice5 318548 318549 . - 2 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE splice3 318607 318608 . - 0 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE CDS 318608 319430 . - 0 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE exon 318608 319430 0.991 - 0 MAGPIE_ID "dm_007_GS_dna_12" #dm_007_GS_12.02
Adh MAGPIE splice5 319430 319431 . - 2 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE splice3 319485 319486 . - 1 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE exon 319486 319939 0.912 - 1 MAGPIE_ID "dm_007_GS_dna_12" #dm_007_GS_12.01
Adh MAGPIE gene 317891 319939 1 + 1 MAGPIE_ID "dm_007_GS_dna_12" # DE dna-directed DNA polymerase gamma 35 kD;ST putative;TY single function;CC Fully annotated copy in dm_008;
Adh MAGPIE CDS 319486 321442 . - 1 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE gene 317891 321442 1 - 1 MAGPIE_ID "dm_008_MP_dna_2" # GN DNApol-gamma35;EC 2.7.7.7;DE DNA-directed DNA polymerase gamma 35 kD;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 321440 321442 . - 1 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE promotor 321562 321601 . - 1 MAGPIE_ID "dm_008_MP_dna_2"
Adh MAGPIE polyA_signal 321713 321718 . - 1 MAGPIE_ID "dm_008_MP_dna_3"
Adh calypso tandemrepeat 321786 321801 . + 2 MAGPIE_CTG "dm_008" # 16 x G
Adh MAGPIE stop_codon 321967 321969 . - 2 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE CDS 321967 323027 . - 0 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE splice5 323027 323028 . - 2 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE splice3 323096 323097 . - 2 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE CDS 323097 323169 . - 2 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE gene 321967 323169 1 - 2 MAGPIE_ID "dm_008_MP_dna_3" # GN Sop2;DE actin related complex p41 subunit;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 323167 323169 . - 2 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE promotor 323489 323528 . - 0 MAGPIE_ID "dm_008_MP_dna_3"
Adh MAGPIE promotor 323573 323612 . + 1 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE start_codon 323788 323790 . + 0 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE CDS 323788 324885 . + 0 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE splice5 324885 324886 . + 2 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE splice3 324938 324939 . + 1 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE CDS 324939 325223 . + 2 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE gene 323788 325223 1 + 0 MAGPIE_ID "dm_008_MP_dna_4" # GN Orc5;DE origin recognition complex, subunit 5 (460 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE stop_codon 325221 325223 . + 2 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE polyA_signal 325259 325264 . + 1 MAGPIE_ID "dm_008_MP_dna_4"
Adh MAGPIE polyA_signal 325355 325360 . - 1 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE CDS 325240 325634 . - 0 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE splice5 325634 325635 . - 2 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE splice3 325688 325689 . - 2 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE CDS 325689 326379 . - 2 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE gene 325240 326379 1 - 2 MAGPIE_ID "dm_008_MP_dna_5" # GN MtPolB;EC 2.7.7.7;DE mitochondrial DNA polymerase accessory subunit precursor;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 326377 326379 . - 2 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE promotor 326907 326946 . - 2 MAGPIE_ID "dm_008_MP_dna_5"
Adh MAGPIE promotor 327035 327074 . + 1 MAGPIE_ID "dm_008_MP_dna_6"
Adh MAGPIE start_codon 327175 327177 . + 0 MAGPIE_ID "dm_008_MP_dna_6"
Adh tblastx similarity 327171 327998 0.0 - 0 MAGPIE_CTG "dm_008" #>gb|U94702|DMU94702 Drosophila melanogaster mitochondrial DNA polymerase accessory
Adh MAGPIE CDS 327175 328002 . + 0 MAGPIE_ID "dm_008_MP_dna_6"
Adh MAGPIE gene 327175 328002 1 + 0 MAGPIE_ID "dm_008_MP_dna_6" # EC 2.7.7.6;DE dna-directed RNA polymerase II p33 subunit;ST putative;TY single function;
Adh MAGPIE polyA_signal 328008 328013 . + 2 MAGPIE_ID "dm_008_MP_dna_6"
Adh MAGPIE polyA_signal 328018 328023 . - 2 MAGPIE_ID "dm_008_GS_dna_7"
Adh MAGPIE exon 328048 328453 0.802 - 1 MAGPIE_ID "dm_008_GS_dna_7" #dm_008_GS_7.02
Adh MAGPIE exon 328473 328606 0.868 - 1 MAGPIE_ID "dm_008_GS_dna_7" #dm_008_GS_7.01
Adh MAGPIE gene 328048 328606 3 + 0 MAGPIE_ID "dm_008_GS_dna_7" # DE ud64h03.y1 mouse EST;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 328843 328882 . - 1 MAGPIE_ID "dm_008_GS_dna_7"
Adh MAGPIE promotor 328976 329015 . + 1 MAGPIE_ID "dm_008_GS_dna_8"
Adh MAGPIE exon 329808 330183 0.999 + 2 MAGPIE_ID "dm_008_GS_dna_8" #dm_008_GS_8.01
Adh calypso tandemrepeat 331264 331285 . + 0 MAGPIE_CTG "dm_008" # 11 x TG
Adh calypso tandemrepeat 331475 331492 . + 1 MAGPIE_CTG "dm_008" # 3 x GGCAGC
Adh MAGPIE exon 331539 331615 0.738 + 2 MAGPIE_ID "dm_008_GS_dna_8" #dm_008_GS_8.02
Adh MAGPIE gene 329808 331615 3 + 2 MAGPIE_ID "dm_008_GS_dna_8" # DE vo17a09.r1 barstead mouse EST;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 331783 331788 . + 0 MAGPIE_ID "dm_008_GS_dna_8"
Adh calypso tandemrepeat 331997 332012 . + 1 MAGPIE_CTG "dm_008" # 16 x T
Adh MAGPIE polyA_signal 332203 332208 . - 2 MAGPIE_ID "dm_008_GS_dna_9"
Adh calypso tandemrepeat 332637 332651 . + 2 MAGPIE_CTG "dm_008" # 5 x AAC
Adh MAGPIE exon 334589 335125 0.768 - 1 MAGPIE_ID "dm_008_GS_dna_9" #dm_008_GS_9.03
Adh MAGPIE exon 336758 337317 0.723 - 2 MAGPIE_ID "dm_008_GS_dna_9" #dm_008_GS_9.02
Adh MAGPIE exon 337379 337457 0.911 - 0 MAGPIE_ID "dm_008_GS_dna_9" #dm_008_GS_9.01
Adh MAGPIE gene 334589 337457 1 + 1 MAGPIE_ID "dm_008_GS_dna_9" # DE GH07914.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 337635 337674 . - 2 MAGPIE_ID "dm_008_GS_dna_9"
Adh MAGPIE exon 338167 338879 0.951 - 0 MAGPIE_ID "dm_008_GS_dna_10" #dm_008_GS_10.02
Adh MAGPIE exon 338944 339013 0.999 - 1 MAGPIE_ID "dm_008_GS_dna_10" #dm_008_GS_10.01
Adh MAGPIE gene 338167 339013 1 + 0 MAGPIE_ID "dm_008_GS_dna_10" # DE LP11861.5prime LP EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 340529 340634 0.996 + 1 MAGPIE_ID "dm_008_GS_dna_11" #dm_008_GS_11.01
Adh MAGPIE exon 340705 340870 0.999 + 0 MAGPIE_ID "dm_008_GS_dna_11" #dm_008_GS_11.02
Adh MAGPIE exon 340926 341517 0.999 + 2 MAGPIE_ID "dm_008_GS_dna_11" #dm_008_GS_11.03
Adh MAGPIE gene 340529 341517 1 + 1 MAGPIE_ID "dm_008_GS_dna_11" # DE LP05416.5prime LP EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 341713 341857 0.990 + 0 MAGPIE_ID "dm_008_GS_dna_12" #dm_008_GS_12.01
Adh MAGPIE exon 342003 342751 0.984 + 2 MAGPIE_ID "dm_008_GS_dna_12" #dm_008_GS_12.02
Adh MAGPIE gene 341713 342751 1 + 0 MAGPIE_ID "dm_008_GS_dna_12" # DE LP05733.5prime LP EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 343169 343368 0.993 + 1 MAGPIE_ID "dm_008_GS_dna_13" #dm_008_GS_13.01
Adh MAGPIE exon 343432 343984 0.683 + 0 MAGPIE_ID "dm_008_GS_dna_13" #dm_008_GS_13.02
Adh MAGPIE gene 343169 343984 1 + 1 MAGPIE_ID "dm_008_GS_dna_13" # DE LP04791.5prime LP EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh reputer repeat 346907 347022 . + . REPEAT "12" # maximal forward repeat
Adh reputer repeat 346937 347318 . + . REPEAT "2" # maximal forward repeat
Adh reputer repeat 347024 347318 . + . REPEAT "55" # maximal forward repeat
Adh reputer repeat 347024 347338 . + . REPEAT "54" # maximal forward repeat
Adh reputer repeat 347338 347513 . + . REPEAT "5" # maximal forward repeat
Adh reputer repeat 347515 347569 . + . REPEAT "8" # maximal forward repeat
Adh reputer repeat 347568 347887 . + . REPEAT "61" # maximal forward repeat
Adh reputer repeat 347892 348131 . + . REPEAT "32" # maximal forward repeat
Adh reputer repeat 348133 348546 . + . REPEAT "87" # maximal forward repeat
Adh reputer repeat 348548 349020 . + . REPEAT "42" # maximal forward repeat
Adh reputer repeat 349022 349704 . + . REPEAT "24" # maximal forward repeat
Adh reputer repeat 349706 349905 . + . REPEAT "27" # maximal forward repeat
Adh reputer repeat 349913 350037 . + . REPEAT "1" # maximal forward repeat
Adh reputer repeat 350039 354163 . + . REPEAT "75" # maximal forward repeat
Adh MAGPIE CDS 352084 354471 . - 2 MAGPIE_ID "dm_008_MP_dna_14"
Adh MAGPIE gene 352084 354471 1 - 2 MAGPIE_ID "dm_008_MP_dna_14" # DE E239.9-1 cDNA, unknown protein (796 aa);ST putative;TY single function;CC Identical to dm_026_GS_dna_4;
Adh calypso tandemrepeat 354987 355002 . + 2 MAGPIE_CTG "dm_008" # 16 x T
Adh reputer repeat 354165 355002 . + . REPEAT "45" # maximal forward repeat
Adh reputer repeat 355078 355141 . + . REPEAT "76" # maximal forward repeat
Adh reputer repeat 355177 355240 . + . REPEAT "76" # maximal forward repeat
Adh reputer repeat 355177 355240 . + . REPEAT "77" # maximal forward repeat
Adh reputer repeat 354987 355395 . + . REPEAT "94" # maximal forward repeat
Adh reputer repeat 355397 355598 . + . REPEAT "89" # maximal forward repeat
Adh reputer repeat 355601 355686 . + . REPEAT "3" # maximal forward repeat
Adh reputer repeat 355601 355982 . + . REPEAT "2" # maximal forward repeat
Adh reputer repeat 355688 355982 . + . REPEAT "53" # maximal forward repeat
Adh reputer repeat 355688 355982 . + . REPEAT "56" # maximal forward repeat
Adh calypso tandemrepeat 357348 357362 . + 2 MAGPIE_CTG "dm_008" # 3 x CACAC
Adh calypso tandemrepeat 359448 359465 . + 2 MAGPIE_CTG "dm_008" # 3 x TCCTCA
Adh MAGPIE exon 359469 359549 0.850 - 0 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.07
Adh MAGPIE exon 359787 359893 0.551 - 1 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.06
Adh MAGPIE exon 360014 360134 0.509 - 0 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.07
Adh MAGPIE exon 360158 360259 0.670 - 1 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.05
Adh MAGPIE exon 360158 360259 0.732 - 1 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.06
Adh MAGPIE exon 361565 361765 0.496 - 1 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.04
Adh MAGPIE exon 361565 361859 0.879 - 0 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.05
Adh MAGPIE exon 362433 362535 0.949 - 2 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.04
Adh MAGPIE exon 363245 363531 0.890 - 2 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.03
Adh MAGPIE exon 363249 363531 0.460 - 2 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.03
Adh MAGPIE exon 364222 364468 0.516 - 1 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.02
Adh MAGPIE exon 364222 364468 0.641 - 1 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.02
Adh MAGPIE exon 364708 364829 0.478 - 0 MAGPIE_ID "dm_009_GS_dna_1" #dm_009_GS_1.01
Adh MAGPIE exon 364708 364829 0.538 - 0 MAGPIE_ID "dm_008_GS_dna_15" #dm_008_GS_15.01
Adh MAGPIE gene 359469 364829 . + 2 MAGPIE_ID "dm_008_GS_dna_15" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 360014 364829 . + 1 MAGPIE_ID "dm_009_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 364995 365034 . - 2 MAGPIE_ID "dm_009_GS_dna_1"
Adh MAGPIE polyA_signal 365040 365045 . - 0 MAGPIE_ID "dm_009_GS_dna_2"
Adh MAGPIE exon 365336 365560 0.926 - 1 MAGPIE_ID "dm_009_GS_dna_2" #dm_009_GS_2.01
Adh MAGPIE gene 365336 365560 . + 1 MAGPIE_ID "dm_009_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 366368 366407 . - 0 MAGPIE_ID "dm_009_GS_dna_2"
Adh calypso tandemrepeat 367195 367209 . + 0 MAGPIE_CTG "dm_009" # 3 x TTCAG
Adh MAGPIE promotor 367184 367223 . + 1 MAGPIE_ID "dm_009_GS_dna_3"
Adh calypso tandemrepeat 367673 367687 . + 1 MAGPIE_CTG "dm_009" # 3 x AATAT
Adh calypso tandemrepeat 367803 367818 . + 2 MAGPIE_CTG "dm_009" # 16 x T
Adh calypso tandemrepeat 368001 368024 . + 2 MAGPIE_CTG "dm_009" # 4 x ATACAG
Adh MAGPIE exon 368407 368477 0.458 + 0 MAGPIE_ID "dm_009_GS_dna_3" #dm_009_GS_3.01
Adh calypso tandemrepeat 368715 368729 . + 2 MAGPIE_CTG "dm_009" # 3 x CTCCA
Adh calypso tandemrepeat 371089 371103 . + 0 MAGPIE_CTG "dm_009" # 5 x GCT
Adh MAGPIE exon 372518 372740 0.198 + 1 MAGPIE_ID "dm_009_GS_dna_3" #dm_009_GS_3.02
Adh MAGPIE gene 368407 372740 . + 0 MAGPIE_ID "dm_009_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 372845 372850 . + 1 MAGPIE_ID "dm_009_GS_dna_3"
Adh MAGPIE promotor 372861 372900 . + 2 MAGPIE_ID "dm_009_GS_dna_4"
Adh MAGPIE exon 373286 373457 0.608 + 1 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.01
Adh MAGPIE exon 376557 376652 0.043 + 2 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.02
Adh calypso tandemrepeat 377546 377561 . + 1 MAGPIE_CTG "dm_009" # 4 x CTAT
Adh calypso tandemrepeat 378071 378086 . + 1 MAGPIE_CTG "dm_009" # 4 x TATG
Adh MAGPIE exon 379125 379228 0.025 + 2 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.03
Adh calypso tandemrepeat 381769 381783 . + 0 MAGPIE_CTG "dm_009" # 5 x CCT
Adh MAGPIE exon 381887 382052 0.266 + 1 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.04
Adh MAGPIE exon 385051 385283 0.037 + 0 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.05
Adh calypso tandemrepeat 385735 385749 . + 0 MAGPIE_CTG "dm_009" # 5 x CAT
Adh calypso tandemrepeat 386121 386138 . + 2 MAGPIE_CTG "dm_009" # 3 x GCATTT
Adh MAGPIE exon 387190 387340 0.007 + 0 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.06
Adh MAGPIE exon 387735 387997 0.010 + 2 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.07
Adh calypso tandemrepeat 388289 388304 . + 1 MAGPIE_CTG "dm_009" # 8 x TG
Adh calypso tandemrepeat 388376 388390 . + 1 MAGPIE_CTG "dm_009" # 3 x GGAGT
Adh MAGPIE exon 388780 388921 0.306 + 0 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.08
Adh MAGPIE exon 389006 389140 0.999 + 1 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.09
Adh MAGPIE exon 389208 390491 0.902 + 2 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.10
Adh MAGPIE exon 390556 390673 0.999 + 0 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.11
Adh MAGPIE exon 390737 391112 0.966 + 1 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.12
Adh MAGPIE exon 391177 391500 0.978 + 0 MAGPIE_ID "dm_009_GS_dna_4" #dm_009_GS_4.13
Adh MAGPIE gene 373286 391500 1 + 1 MAGPIE_ID "dm_009_GS_dna_4" # DE kiaa0167 protein;ST putative;TY single function;CC No strong matches to Drosophila; extra exons (big ones) compared to human matches;
Adh MAGPIE polyA_signal 392441 392446 . + 1 MAGPIE_ID "dm_009_GS_dna_4"
Adh MAGPIE polyA_signal 392601 392606 . - 0 MAGPIE_ID "dm_009_GS_dna_5"
Adh MAGPIE exon 393012 393326 0.331 - 0 MAGPIE_ID "dm_009_GS_dna_5" #dm_009_GS_5.05
Adh calypso tandemrepeat 393337 393354 . + 0 MAGPIE_CTG "dm_009" # 3 x CAGTTT
Adh MAGPIE exon 393630 393814 0.502 - 1 MAGPIE_ID "dm_009_GS_dna_5" #dm_009_GS_5.04
Adh MAGPIE exon 393894 394052 0.999 - 0 MAGPIE_ID "dm_009_GS_dna_5" #dm_009_GS_5.03
Adh MAGPIE exon 394383 397468 0.998 - 1 MAGPIE_ID "dm_009_GS_dna_5" #dm_009_GS_5.02
Adh MAGPIE exon 397532 397671 0.589 - 2 MAGPIE_ID "dm_009_GS_dna_5" #dm_009_GS_5.01
Adh MAGPIE gene 393012 397671 1 + 2 MAGPIE_ID "dm_009_GS_dna_5" # DE LD29084.5prime drosophila EST;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 398124 398163 . - 2 MAGPIE_ID "dm_009_GS_dna_5"
Adh MAGPIE promotor 399364 399403 . + 0 MAGPIE_ID "dm_009_MP_dna_6"
Adh calypso tandemrepeat 400273 400292 . + 0 MAGPIE_CTG "dm_009" # 20 x A
Adh MAGPIE start_codon 400338 400340 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE CDS 400338 400923 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice5 400923 400924 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice3 401349 401350 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE CDS 401350 401713 . + 0 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice5 401713 401714 . + 0 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice3 401774 401775 . + 1 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE CDS 401775 402341 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice5 402341 402342 . + 1 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice3 402398 402399 . + 1 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE CDS 402399 402539 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice5 402539 402540 . + 1 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE splice3 402606 402607 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE CDS 402607 402780 . + 0 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE gene 400338 402780 1 + 2 MAGPIE_ID "dm_009_MP_dna_6" # GN Ance;EC 3.4.15.1;DE angiotensin converting enzyme precursor;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 405952 405954 . + 0 MAGPIE_ID "dm_010_MP_dna_1"
Adh MAGPIE CDS 405952 406314 . + 0 MAGPIE_ID "dm_010_MP_dna_1"
Adh MAGPIE gene 405952 406314 1 + 0 MAGPIE_ID "dm_010_MP_dna_1" # GN acyp;EC 3.6.1.7;DE Acyl phosphatase;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 406332 406337 . + 2 MAGPIE_ID "dm_009_MP_dna_6"
Adh MAGPIE polyA_signal 406332 406337 . + 2 MAGPIE_ID "dm_010_MP_dna_1"
Adh MAGPIE promotor 407910 407949 . + 2 MAGPIE_ID "dm_009_GS_dna_7"
Adh MAGPIE promotor 407910 407949 . + 2 MAGPIE_ID "dm_010_GS_dna_2"
Adh MAGPIE exon 408210 408401 0.294 + 2 MAGPIE_ID "dm_009_GS_dna_7" #dm_009_GS_7.01
Adh MAGPIE exon 408210 408401 0.294 + 2 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.01
Adh MAGPIE exon 408852 409001 0.343 + 2 MAGPIE_ID "dm_009_GS_dna_7" #dm_009_GS_7.02
Adh MAGPIE exon 408852 409001 0.343 + 2 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.02
Adh MAGPIE exon 409150 409656 0.726 + 0 MAGPIE_ID "dm_009_GS_dna_7" #dm_009_GS_7.03
Adh MAGPIE exon 409150 409656 0.996 + 0 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.03
Adh MAGPIE gene 408210 409656 . + 2 MAGPIE_ID "dm_009_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 410157 410315 0.989 + 2 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.04
Adh MAGPIE exon 410372 410612 0.394 + 1 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.05
Adh MAGPIE exon 410677 411401 0.986 + 0 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.06
Adh MAGPIE exon 411728 411831 0.927 + 1 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.07
Adh calypso tandemrepeat 411848 411865 . + 1 MAGPIE_CTG "dm_010" # 3 x ATATAA
Adh MAGPIE exon 411898 412000 0.812 + 0 MAGPIE_ID "dm_010_GS_dna_2" #dm_010_GS_2.08
Adh MAGPIE gene 408210 412000 1 + 2 MAGPIE_ID "dm_010_GS_dna_2" # DE angiotensin converting enzyme (1312 aa);ST putative;TY single function;CC Gene duplication?; No strong matches in Drosophila; matches homologues of angiotensin converting enzyme in Drosophila and other species;
Adh MAGPIE polyA_signal 412698 412703 . + 2 MAGPIE_ID "dm_010_GS_dna_2"
Adh MAGPIE polyA_signal 412834 412839 . - 2 MAGPIE_ID "dm_010_GS_dna_3"
Adh MAGPIE exon 414711 415055 0.016 - 0 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.07
Adh MAGPIE exon 415627 416211 0.020 - 2 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.06
Adh MAGPIE exon 416276 416749 0.993 - 1 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.05
Adh calypso tandemrepeat 417518 417532 . + 1 MAGPIE_CTG "dm_010" # 5 x TGT
Adh MAGPIE exon 417423 417621 0.460 - 2 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.04
Adh MAGPIE exon 418131 418273 0.023 - 1 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.03
Adh calypso tandemrepeat 419180 419194 . + 1 MAGPIE_CTG "dm_010" # 3 x ACTCC
Adh MAGPIE exon 424506 424832 0.040 - 0 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.02
Adh MAGPIE exon 424891 424974 0.997 - 2 MAGPIE_ID "dm_010_GS_dna_3" #dm_010_GS_3.01
Adh MAGPIE gene 414711 424974 2 + 2 MAGPIE_ID "dm_010_GS_dna_3" # DE cytoskeletal protein - euglena (651 aa);ST putative;TY single function;CC No strong matches in Drosophila; very repetitive region (non-informative);
Adh MAGPIE promotor 425167 425206 . - 1 MAGPIE_ID "dm_010_GS_dna_3"
Adh MAGPIE polyA_signal 425717 425722 . - 1 MAGPIE_ID "dm_010_GS_dna_4"
Adh MAGPIE exon 426746 427525 0.891 - 1 MAGPIE_ID "dm_010_GS_dna_4" #dm_010_GS_4.01
Adh MAGPIE gene 426746 427525 3 + 1 MAGPIE_ID "dm_010_GS_dna_4" # DE cell wall-plasma membrane protein (376 aa);ST putative;TY single function;CC No strong matches to drosophila;
Adh calypso tandemrepeat 428234 428249 . + 1 MAGPIE_CTG "dm_010" # 8 x AT
Adh MAGPIE promotor 428436 428475 . - 2 MAGPIE_ID "dm_010_GS_dna_4"
Adh calypso tandemrepeat 429724 429741 . + 0 MAGPIE_CTG "dm_010" # 3 x CAGTTG
Adh MAGPIE polyA_signal 431906 431911 . - 1 MAGPIE_ID "dm_010_GS_dna_5"
Adh MAGPIE exon 431931 432168 0.487 - 2 MAGPIE_ID "dm_010_GS_dna_5" #dm_010_GS_5.04
Adh calypso tandemrepeat 433158 433173 . + 2 MAGPIE_CTG "dm_010" # 16 x A
Adh MAGPIE exon 433244 433516 0.536 - 1 MAGPIE_ID "dm_010_GS_dna_5" #dm_010_GS_5.03
Adh MAGPIE exon 438983 439800 0.045 - 2 MAGPIE_ID "dm_010_GS_dna_5" #dm_010_GS_5.02
Adh MAGPIE exon 440839 440850 0.950 - 2 MAGPIE_ID "dm_010_GS_dna_5" #dm_010_GS_5.01
Adh MAGPIE gene 431931 440850 2 + 2 MAGPIE_ID "dm_010_GS_dna_5" # DE period clock protein (672 aa);ST putative;TY single function;CC No strong matches to anything in Drosophila; very repetitive (non-informative);
Adh MAGPIE promotor 441218 441257 . - 0 MAGPIE_ID "dm_010_GS_dna_5"
Adh MAGPIE polyA_signal 441683 441688 . - 1 MAGPIE_ID "dm_010_GS_dna_6"
Adh calypso tandemrepeat 441893 441907 . + 1 MAGPIE_CTG "dm_010" # 15 x A
Adh MAGPIE exon 444283 444471 0.717 - 2 MAGPIE_ID "dm_010_GS_dna_6" #dm_010_GS_6.02
Adh MAGPIE exon 444724 444768 0.637 - 2 MAGPIE_ID "dm_010_GS_dna_6" #dm_010_GS_6.01
Adh MAGPIE gene 444283 444768 . + 0 MAGPIE_ID "dm_010_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 444780 444819 . - 2 MAGPIE_ID "dm_010_GS_dna_6"
Adh MAGPIE promotor 445121 445160 . + 1 MAGPIE_ID "dm_010_GS_dna_7"
Adh MAGPIE exon 445189 445277 0.448 + 0 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.01
Adh MAGPIE exon 446294 446429 0.369 + 1 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.02
Adh MAGPIE exon 446732 447001 0.116 + 1 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.03
Adh calypso tandemrepeat 447518 447535 . + 1 MAGPIE_CTG "dm_010" # 3 x GTTGCA
Adh MAGPIE exon 448492 448607 0.157 + 0 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.04
Adh MAGPIE exon 449015 449247 0.927 + 1 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.05
Adh calypso tandemrepeat 449494 449508 . + 0 MAGPIE_CTG "dm_010" # 15 x A
Adh MAGPIE exon 451744 451902 0.274 + 0 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.01
Adh MAGPIE exon 451744 451902 0.861 + 0 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.06
Adh MAGPIE exon 452734 452909 0.009 + 0 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.07
Adh MAGPIE exon 452734 452909 0.173 + 0 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.02
Adh MAGPIE exon 454581 454755 0.009 + 2 MAGPIE_ID "dm_010_GS_dna_7" #dm_010_GS_7.08
Adh MAGPIE gene 445189 454755 2 + 0 MAGPIE_ID "dm_010_GS_dna_7" # DE putative metalloprotease; Method: (615 aa);ST putative;TY single function;CC Only central exon matches anything; No strong matches in Drosophila;
Adh MAGPIE exon 455021 455702 0.448 + 1 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.03
Adh MAGPIE exon 455974 456225 0.032 + 0 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.04
Adh MAGPIE exon 457233 457488 0.035 + 2 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.05
Adh MAGPIE exon 457649 458206 0.983 + 1 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.06
Adh MAGPIE exon 458285 458600 0.957 + 1 MAGPIE_ID "dm_011_GS_dna_1" #dm_011_GS_1.07
Adh MAGPIE gene 451744 458600 2 + 0 MAGPIE_ID "dm_011_GS_dna_1" # DE Wnt inh (378 aa);ST putative;TY single function;CC No strong matches in Drosophila; matches are only to second half of the protein;
Adh MAGPIE polyA_signal 458729 458734 . + 1 MAGPIE_ID "dm_011_GS_dna_1"
Adh MAGPIE polyA_signal 458792 458797 . - 1 MAGPIE_ID "dm_011_GS_dna_2"
Adh MAGPIE exon 458837 459146 0.989 - 0 MAGPIE_ID "dm_011_GS_dna_2" #dm_011_GS_2.03
Adh MAGPIE exon 459225 459761 0.998 - 0 MAGPIE_ID "dm_011_GS_dna_2" #dm_011_GS_2.02
Adh MAGPIE exon 460256 460674 0.998 - 2 MAGPIE_ID "dm_011_GS_dna_2" #dm_011_GS_2.01
Adh MAGPIE gene 458837 460674 2 + 1 MAGPIE_ID "dm_011_GS_dna_2" # DE fibrillin 2 (2911 aa);ST putative;TY single function;CC Also hits Wnt inh, but no _strong_ matches in Drosophila; pseudogene?;
Adh MAGPIE promotor 461061 461100 . - 2 MAGPIE_ID "dm_011_GS_dna_2"
Adh MAGPIE polyA_signal 461226 461231 . - 0 MAGPIE_ID "dm_011_GS_dna_3"
Adh MAGPIE exon 461236 461787 0.443 - 2 MAGPIE_ID "dm_011_GS_dna_3" #dm_011_GS_3.04
Adh MAGPIE exon 462179 462584 0.451 - 0 MAGPIE_ID "dm_011_GS_dna_3" #dm_011_GS_3.03
Adh MAGPIE exon 462646 463209 0.666 - 2 MAGPIE_ID "dm_011_GS_dna_3" #dm_011_GS_3.02
Adh MAGPIE exon 463368 463657 0.666 - 1 MAGPIE_ID "dm_011_GS_dna_3" #dm_011_GS_3.01
Adh MAGPIE gene 461236 463657 3 + 0 MAGPIE_ID "dm_011_GS_dna_3" # DE fibrillin - human (fragment) (1029 aa);ST putative;TY single function;CC Also hits Wnt inh, but no _strong_ matches in Drosophila; pseudogene?;
Adh MAGPIE promotor 463722 463761 . - 2 MAGPIE_ID "dm_011_GS_dna_3"
Adh MAGPIE promotor 463905 463944 . + 2 MAGPIE_ID "dm_011_GS_dna_4"
Adh calypso tandemrepeat 463991 464010 . + 1 MAGPIE_CTG "dm_011" # 4 x TATTT
Adh MAGPIE exon 464308 464615 0.816 + 0 MAGPIE_ID "dm_011_GS_dna_4" #dm_011_GS_4.01
Adh MAGPIE exon 464888 465434 0.441 + 1 MAGPIE_ID "dm_011_GS_dna_4" #dm_011_GS_4.02
Adh MAGPIE gene 464308 465434 2 + 0 MAGPIE_ID "dm_011_GS_dna_4" # DE C901 protein;ST putative;TY single function;CC Also hits c901, Wnt inh, but no _strong_ matches in Drosophila; pseudogene?;
Adh MAGPIE polyA_signal 465696 465701 . + 2 MAGPIE_ID "dm_011_GS_dna_4"
Adh MAGPIE polyA_signal 465866 465871 . - 1 MAGPIE_ID "dm_011_GS_dna_5"
Adh MAGPIE exon 465989 466333 0.555 - 1 MAGPIE_ID "dm_011_GS_dna_5" #dm_011_GS_5.01
Adh MAGPIE gene 465989 466333 2 + 1 MAGPIE_ID "dm_011_GS_dna_5" # DE SD07215.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 466833 466872 . - 2 MAGPIE_ID "dm_011_GS_dna_5"
Adh MAGPIE polyA_signal 466939 466944 . - 2 MAGPIE_ID "dm_011_GS_dna_6"
Adh calypso tandemrepeat 467074 467089 . + 0 MAGPIE_CTG "dm_011" # 4 x TATG
Adh MAGPIE exon 467979 469610 0.902 - 0 MAGPIE_ID "dm_011_GS_dna_6" #dm_011_GS_6.01
Adh MAGPIE gene 467979 469610 2 + 2 MAGPIE_ID "dm_011_GS_dna_6" # DE hexabrachion (2203 aa);ST putative;TY single function;CC No exact matches in Drosophila; does match some fruitfly proteins; gene duplication?;
Adh MAGPIE promotor 470118 470157 . - 2 MAGPIE_ID "dm_011_GS_dna_6"
Adh MAGPIE promotor 471017 471056 . + 1 MAGPIE_ID "dm_011_GS_dna_7"
Adh MAGPIE exon 471109 471296 0.997 + 0 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.01
Adh MAGPIE exon 471441 471687 0.814 + 2 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.02
Adh MAGPIE exon 471752 471856 0.971 + 1 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.03
Adh calypso tandemrepeat 471909 471924 . + 2 MAGPIE_CTG "dm_011" # 16 x T
Adh MAGPIE exon 471944 472490 0.985 + 1 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.04
Adh MAGPIE exon 472557 472823 0.514 + 2 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.05
Adh calypso tandemrepeat 472925 472939 . + 1 MAGPIE_CTG "dm_011" # 5 x TAT
Adh MAGPIE exon 472965 473087 0.130 + 2 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.06
Adh MAGPIE exon 473909 474023 0.136 + 1 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.07
Adh MAGPIE exon 474365 475283 0.951 + 1 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.08
Adh MAGPIE exon 475427 476389 0.822 + 1 MAGPIE_ID "dm_011_GS_dna_7" #dm_011_GS_7.09
Adh MAGPIE gene 471109 476389 1 + 0 MAGPIE_ID "dm_011_GS_dna_7" # DE homologue of fruitfly cytochrome P450 (496 aa);ST putative;TY single function;CC No strong matches in Drosophila; Gene duplication?;
Adh calypso tandemrepeat 476610 476631 . + 2 MAGPIE_CTG "dm_011" # 11 x AT
Adh MAGPIE polyA_signal 476680 476685 . + 0 MAGPIE_ID "dm_011_GS_dna_7"
Adh MAGPIE polyA_signal 476989 476994 . - 2 MAGPIE_ID "dm_011_GS_dna_8"
Adh MAGPIE exon 477171 477490 0.998 - 1 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.11
Adh MAGPIE exon 477548 479329 0.947 - 1 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.10
Adh MAGPIE exon 479386 479783 0.603 - 0 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.09
Adh MAGPIE exon 479815 479958 0.820 - 2 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.08
Adh MAGPIE exon 480147 480287 0.998 - 0 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.07
Adh MAGPIE exon 480343 480480 0.911 - 2 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.06
Adh MAGPIE exon 481570 481638 0.418 - 2 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.05
Adh MAGPIE exon 483386 483457 0.417 - 1 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.04
Adh MAGPIE exon 484195 484338 0.728 - 2 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.03
Adh calypso tandemrepeat 484358 484372 . + 1 MAGPIE_CTG "dm_011" # 15 x T
Adh calypso tandemrepeat 484595 484612 . + 1 MAGPIE_CTG "dm_011" # 9 x CA
Adh MAGPIE exon 484664 484807 0.988 - 1 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.02
Adh calypso tandemrepeat 485890 485905 . + 0 MAGPIE_CTG "dm_011" # 4 x TTAT
Adh calypso tandemrepeat 487040 487057 . + 1 MAGPIE_CTG "dm_011" # 6 x TGC
Adh MAGPIE exon 486686 487236 0.993 - 2 MAGPIE_ID "dm_011_GS_dna_8" #dm_011_GS_8.01
Adh MAGPIE gene 477171 487236 1 + 2 MAGPIE_ID "dm_011_GS_dna_8" # DE G protein-coupled receptor LGR5 (907 aa);ST putative;TY single function;CC No strong matches in Drosophila; Match is to central region; homologue of G proteins;
Adh calypso tandemrepeat 488023 488040 . + 0 MAGPIE_CTG "dm_011" # 9 x CA
Adh calypso tandemrepeat 490320 490336 . + 2 MAGPIE_CTG "dm_011" # 17 x T
Adh MAGPIE promotor 490400 490439 . - 0 MAGPIE_ID "dm_011_GS_dna_8"
Adh MAGPIE promotor 490755 490794 . + 2 MAGPIE_ID "dm_011_GS_dna_9"
Adh calypso tandemrepeat 493299 493314 . + 2 MAGPIE_CTG "dm_011" # 16 x T
Adh MAGPIE exon 493406 493606 0.348 + 1 MAGPIE_ID "dm_011_GS_dna_9" #dm_011_GS_9.01
Adh calypso tandemrepeat 494589 494604 . + 2 MAGPIE_CTG "dm_011" # 8 x AC
Adh calypso tandemrepeat 495032 495052 . + 1 MAGPIE_CTG "dm_011" # 7 x GCA
Adh calypso tandemrepeat 495032 495052 . + 1 MAGPIE_CTG "dm_012" # 7 x GCA
Adh MAGPIE exon 494963 495133 0.646 + 1 MAGPIE_ID "dm_011_GS_dna_9" #dm_011_GS_9.02
Adh MAGPIE exon 495756 496007 0.698 + 2 MAGPIE_ID "dm_011_GS_dna_9" #dm_011_GS_9.03
Adh MAGPIE exon 495756 496007 0.819 + 2 MAGPIE_ID "dm_012_GS_dna_1" #dm_012_GS_1.01
Adh MAGPIE gene 493406 496007 3 + 1 MAGPIE_ID "dm_011_GS_dna_9" # DE super cysteine rich protein; SCRP (46 aa);ST putative;TY single function;CC Only matches a c-rich region. Repetitive and non-informative;
Adh MAGPIE gene 495756 496007 . - 0 MAGPIE_ID "dm_012_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 496456 496461 . + 0 MAGPIE_ID "dm_011_GS_dna_9"
Adh MAGPIE polyA_signal 496456 496461 . + 0 MAGPIE_ID "dm_012_GS_dna_1"
Adh MAGPIE promotor 497580 497619 . + 2 MAGPIE_ID "dm_012_GS_dna_2"
Adh MAGPIE exon 498520 498979 0.831 + 0 MAGPIE_ID "dm_011_GS_dna_10" #dm_011_GS_10.01
Adh MAGPIE exon 498520 498979 0.870 + 0 MAGPIE_ID "dm_012_GS_dna_2" #dm_012_GS_2.01
Adh MAGPIE exon 499082 499159 0.703 + 1 MAGPIE_ID "dm_011_GS_dna_10" #dm_011_GS_10.02
Adh MAGPIE exon 499082 499159 0.767 + 1 MAGPIE_ID "dm_012_GS_dna_2" #dm_012_GS_2.02
Adh calypso tandemrepeat 499214 499229 . + 1 MAGPIE_CTG "dm_011" # 4 x TAGT
Adh calypso tandemrepeat 499214 499229 . + 1 MAGPIE_CTG "dm_012" # 4 x TAGT
Adh MAGPIE exon 499280 499563 0.029 + 1 MAGPIE_ID "dm_012_GS_dna_2" #dm_012_GS_2.03
Adh MAGPIE exon 499280 499563 0.084 + 1 MAGPIE_ID "dm_011_GS_dna_10" #dm_011_GS_10.03
Adh MAGPIE gene 498520 499563 . + 0 MAGPIE_ID "dm_011_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 501325 501339 . + 0 MAGPIE_CTG "dm_012" # 15 x A
Adh calypso tandemrepeat 502593 502607 . + 2 MAGPIE_CTG "dm_012" # 3 x CAAAA
Adh calypso tandemrepeat 503810 503825 . + 1 MAGPIE_CTG "dm_012" # 16 x A
Adh MAGPIE exon 507216 507581 0.987 + 2 MAGPIE_ID "dm_012_GS_dna_2" #dm_012_GS_2.04
Adh MAGPIE gene 498520 507581 . - 0 MAGPIE_ID "dm_012_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 507896 507919 . + 1 MAGPIE_CTG "dm_012" # 6 x TCCA
Adh MAGPIE polyA_signal 508296 508301 . + 2 MAGPIE_ID "dm_012_GS_dna_2"
Adh MAGPIE promotor 508872 508911 . + 2 MAGPIE_ID "dm_012_GS_dna_3"
Adh MAGPIE exon 509545 509783 0.997 + 0 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.01
Adh MAGPIE exon 509881 510226 0.999 + 0 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.02
Adh MAGPIE exon 510287 510775 0.883 + 1 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.03
Adh MAGPIE exon 511163 511359 0.855 + 1 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.04
Adh tblastx similarity 510366 511767 3e-17 - 2 MAGPIE_CTG "dm_012" #Homo sapiens mRNA for KIAA0631 protein, partial cds
Adh MAGPIE exon 511784 512375 0.983 + 1 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.05
Adh MAGPIE exon 512435 512758 0.999 + 1 MAGPIE_ID "dm_012_GS_dna_3" #dm_012_GS_3.06
Adh MAGPIE gene 509545 512758 1 - 1 MAGPIE_ID "dm_012_GS_dna_3" # DE long-chain-fatty-acid--coa ligase (601 aa);ST putative;TY single function;CC No strong matches in Drosophila; closest matches have extra/missing exons.;
Adh MAGPIE polyA_signal 513051 513056 . + 2 MAGPIE_ID "dm_012_GS_dna_3"
Adh MAGPIE polyA_signal 513150 513155 . - 0 MAGPIE_ID "dm_012_GS_dna_4"
Adh MAGPIE exon 513238 514050 0.878 - 2 MAGPIE_ID "dm_012_GS_dna_4" #dm_012_GS_4.01
Adh MAGPIE gene 513238 514050 3 - 2 MAGPIE_ID "dm_012_GS_dna_4" # DE LP05465.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh calypso tandemrepeat 515838 515861 . + 2 MAGPIE_CTG "dm_012" # 12 x TG
Adh MAGPIE promotor 520350 520389 . - 2 MAGPIE_ID "dm_012_GS_dna_4"
Adh MAGPIE promotor 520720 520759 . + 0 MAGPIE_ID "dm_012_GS_dna_5"
Adh MAGPIE exon 520781 521850 0.998 + 1 MAGPIE_ID "dm_012_GS_dna_5" #dm_012_GS_5.01
Adh blastx similarity 512360 522062 3e-16 - 0 MAGPIE_CTG "dm_012" #LONG-CHAIN-FATTY-ACID--COA LIGASE 2
Adh MAGPIE exon 522013 522988 0.999 + 0 MAGPIE_ID "dm_012_GS_dna_5" #dm_012_GS_5.02
Adh MAGPIE gene 520781 522988 1 - 1 MAGPIE_ID "dm_012_GS_dna_5" # DE kiaa0631 protein;ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 523210 523215 . + 0 MAGPIE_ID "dm_012_GS_dna_5"
Adh MAGPIE polyA_signal 523326 523331 . - 0 MAGPIE_ID "dm_012_GS_dna_6"
Adh MAGPIE exon 523395 523601 0.539 - 0 MAGPIE_ID "dm_012_GS_dna_6" #dm_012_GS_6.03
Adh MAGPIE exon 523660 524253 0.486 - 2 MAGPIE_ID "dm_012_GS_dna_6" #dm_012_GS_6.02
Adh MAGPIE exon 524438 525283 0.998 - 1 MAGPIE_ID "dm_012_GS_dna_6" #dm_012_GS_6.01
Adh MAGPIE gene 523395 525283 1 - 1 MAGPIE_ID "dm_012_GS_dna_6" # DE C. elegans cDNA yk132 (1066 aa);ST putative;TY single function;CC Homologous but not identical to Drosophila wheeler protein; gene duplication?;
Adh MAGPIE promotor 525872 525911 . - 0 MAGPIE_ID "dm_012_GS_dna_6"
Adh MAGPIE promotor 527182 527221 . + 0 MAGPIE_ID "dm_012_GS_dna_7"
Adh calypso tandemrepeat 529704 529718 . + 2 MAGPIE_CTG "dm_012" # 3 x CATTT
Adh MAGPIE exon 531864 531942 0.758 + 2 MAGPIE_ID "dm_012_GS_dna_7" #dm_012_GS_7.01
Adh MAGPIE exon 532391 532713 0.751 + 1 MAGPIE_ID "dm_012_GS_dna_7" #dm_012_GS_7.02
Adh MAGPIE gene 531864 532713 . - 2 MAGPIE_ID "dm_012_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 533163 533168 . + 2 MAGPIE_ID "dm_012_GS_dna_7"
Adh MAGPIE polyA_signal 533285 533290 . - 1 MAGPIE_ID "dm_012_GS_dna_8"
Adh calypso tandemrepeat 533284 533299 . + 0 MAGPIE_CTG "dm_012" # 4 x ATTT
Adh MAGPIE exon 533592 533994 0.677 - 2 MAGPIE_ID "dm_012_GS_dna_8" #dm_012_GS_8.04
Adh MAGPIE exon 534017 534188 0.636 - 0 MAGPIE_ID "dm_012_GS_dna_8" #dm_012_GS_8.03
Adh calypso tandemrepeat 534250 534267 . + 0 MAGPIE_CTG "dm_012" # 9 x GT
Adh MAGPIE exon 534467 534571 0.752 - 1 MAGPIE_ID "dm_012_GS_dna_8" #dm_012_GS_8.02
Adh calypso tandemrepeat 534551 534571 . + 1 MAGPIE_CTG "dm_012" # 7 x CAT
Adh MAGPIE exon 536670 536913 0.780 - 2 MAGPIE_ID "dm_012_GS_dna_8" #dm_012_GS_8.01
Adh MAGPIE gene 533592 536913 . - 2 MAGPIE_ID "dm_012_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 537914 537953 . - 0 MAGPIE_ID "dm_012_GS_dna_8"
Adh MAGPIE polyA_signal 538011 538016 . - 0 MAGPIE_ID "dm_012_GS_dna_9"
Adh calypso tandemrepeat 538105 538122 . + 0 MAGPIE_CTG "dm_012" # 9 x TG
Adh calypso tandemrepeat 539677 539694 . + 0 MAGPIE_CTG "dm_012" # 3 x GATACA
Adh calypso tandemrepeat 539709 539726 . + 2 MAGPIE_CTG "dm_012" # 9 x CA
Adh MAGPIE exon 539230 539739 0.880 - 2 MAGPIE_ID "dm_012_GS_dna_9" #dm_012_GS_9.01
Adh MAGPIE gene 539230 539739 . - 2 MAGPIE_ID "dm_012_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 540109 540148 . - 1 MAGPIE_ID "dm_012_GS_dna_9"
Adh MAGPIE exon 541276 542513 0.890 + 0 MAGPIE_ID "dm_013_GS_dna_1" #dm_013_GS_1.01
Adh MAGPIE exon 541380 542513 0.945 + 2 MAGPIE_ID "dm_012_GS_dna_10" #dm_012_GS_10.01
Adh MAGPIE gene 541276 542513 3 - 0 MAGPIE_ID "dm_013_GS_dna_1" # DE fibrillin - human (fragment) (1029 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE gene 541380 542513 2 - 0 MAGPIE_ID "dm_012_GS_dna_10" # DE HL01967.5prime HL EST drosophila;ST putative;TY single function;CC EST matches plus level 3 homology to human fibrillin;
Adh MAGPIE polyA_signal 542595 542600 . + 2 MAGPIE_ID "dm_013_GS_dna_1"
Adh MAGPIE polyA_signal 542679 542684 . - 0 MAGPIE_ID "dm_013_GS_dna_2"
Adh MAGPIE exon 543431 543581 0.915 - 0 MAGPIE_ID "dm_012_GS_dna_11" #dm_012_GS_11.01
Adh MAGPIE gene 543431 543581 . - 0 MAGPIE_ID "dm_012_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 543940 543963 . + 0 MAGPIE_CTG "dm_012" # 12 x TG
Adh calypso tandemrepeat 543940 543963 . + 0 MAGPIE_CTG "dm_013" # 12 x TG
Adh calypso tandemrepeat 544062 544079 . + 2 MAGPIE_CTG "dm_012" # 3 x TGCCTT
Adh calypso tandemrepeat 544062 544079 . + 2 MAGPIE_CTG "dm_013" # 3 x TGCCTT
Adh MAGPIE exon 544032 544171 0.342 - 1 MAGPIE_ID "dm_013_GS_dna_2" #dm_013_GS_2.05
Adh calypso tandemrepeat 545026 545040 . + 0 MAGPIE_CTG "dm_013" # 5 x TGC
Adh MAGPIE exon 544890 545045 0.719 - 0 MAGPIE_ID "dm_013_GS_dna_2" #dm_013_GS_2.04
Adh MAGPIE exon 545369 545712 0.072 - 2 MAGPIE_ID "dm_013_GS_dna_2" #dm_013_GS_2.03
Adh calypso tandemrepeat 546049 546068 . + 0 MAGPIE_CTG "dm_013" # 4 x TTTTA
Adh calypso tandemrepeat 546183 546200 . + 2 MAGPIE_CTG "dm_013" # 9 x GT
Adh calypso tandemrepeat 548133 548154 . + 2 MAGPIE_CTG "dm_013" # 11 x CA
Adh MAGPIE exon 551013 551277 0.015 - 2 MAGPIE_ID "dm_013_GS_dna_2" #dm_013_GS_2.02
Adh MAGPIE exon 552580 552670 0.168 - 1 MAGPIE_ID "dm_013_GS_dna_2" #dm_013_GS_2.01
Adh MAGPIE gene 544032 552670 . - 1 MAGPIE_ID "dm_013_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 553125 553164 . - 2 MAGPIE_ID "dm_013_GS_dna_2"
Adh MAGPIE promotor 555221 555260 . + 1 MAGPIE_ID "dm_013_GS_dna_3"
Adh MAGPIE exon 555360 555824 0.988 + 2 MAGPIE_ID "dm_013_GS_dna_3" #dm_013_GS_3.01
Adh MAGPIE exon 555920 556630 0.997 + 1 MAGPIE_ID "dm_013_GS_dna_3" #dm_013_GS_3.02
Adh MAGPIE gene 555360 556630 . - 1 MAGPIE_ID "dm_013_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 557619 557624 . + 2 MAGPIE_ID "dm_013_GS_dna_3"
Adh MAGPIE polyA_signal 557667 557672 . - 0 MAGPIE_ID "dm_013_GS_dna_4"
Adh calypso tandemrepeat 559442 559457 . + 1 MAGPIE_CTG "dm_013" # 8 x TG
Adh MAGPIE exon 559562 559636 0.029 - 1 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.06
Adh MAGPIE exon 561810 562023 0.175 - 2 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.05
Adh calypso tandemrepeat 562060 562079 . + 0 MAGPIE_CTG "dm_013" # 10 x GT
Adh calypso tandemrepeat 563160 563177 . + 2 MAGPIE_CTG "dm_013" # 9 x CA
Adh calypso tandemrepeat 563387 563402 . + 1 MAGPIE_CTG "dm_013" # 4 x GGTT
Adh MAGPIE exon 564255 564453 0.876 - 2 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.04
Adh MAGPIE exon 564467 564611 0.879 - 0 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.03
Adh MAGPIE exon 565610 565773 0.897 - 2 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.02
Adh MAGPIE exon 565822 565897 0.736 - 1 MAGPIE_ID "dm_013_GS_dna_4" #dm_013_GS_4.01
Adh MAGPIE gene 559562 565897 . - 1 MAGPIE_ID "dm_013_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 567525 567564 . - 2 MAGPIE_ID "dm_013_GS_dna_4"
Adh calypso tandemrepeat 567593 567609 . + 1 MAGPIE_CTG "dm_013" # 17 x T
Adh MAGPIE promotor 567891 567930 . + 2 MAGPIE_ID "dm_013_GS_dna_5"
Adh calypso tandemrepeat 568971 568986 . + 2 MAGPIE_CTG "dm_013" # 8 x CA
Adh MAGPIE exon 568986 569222 0.005 + 2 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.01
Adh MAGPIE exon 570329 570621 0.531 + 1 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.02
Adh MAGPIE exon 570790 570947 0.562 + 0 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.03
Adh calypso tandemrepeat 574093 574107 . + 0 MAGPIE_CTG "dm_013" # 5 x CTA
Adh MAGPIE exon 574289 574483 0.997 + 1 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.04
Adh MAGPIE exon 575409 575495 0.839 + 2 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.05
Adh tblastx similarity 574282 575515 6e-18 + 0 MAGPIE_CTG "dm_013" #Rattus rattus acetylcholine receptor alpha 9 subunit (nAChR) mRNA
Adh calypso tandemrepeat 577165 577180 . + 0 MAGPIE_CTG "dm_013" # 8 x AT
Adh calypso tandemrepeat 577385 577400 . + 1 MAGPIE_CTG "dm_013" # 4 x CCAA
Adh MAGPIE exon 579774 579941 0.056 + 2 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.06
Adh MAGPIE exon 581726 581865 0.128 + 1 MAGPIE_ID "dm_013_GS_dna_5" #dm_013_GS_5.07
Adh MAGPIE gene 568986 581865 1 - 2 MAGPIE_ID "dm_013_GS_dna_5" # DE nicotinic acetylcholine receptor (501 aa);ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE polyA_signal 582091 582096 . + 0 MAGPIE_ID "dm_013_GS_dna_5"
Adh MAGPIE polyA_signal 582216 582221 . - 0 MAGPIE_ID "dm_013_GS_dna_6"
Adh MAGPIE exon 582401 582535 0.012 - 1 MAGPIE_ID "dm_013_GS_dna_6" #dm_013_GS_6.01
Adh MAGPIE gene 582401 582535 1 - 1 MAGPIE_ID "dm_013_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 582565 582604 . - 1 MAGPIE_ID "dm_013_GS_dna_6"
Adh blastx similarity 582854 583000 . + 1 MAGPIE_CTG "dm_013" #nicotinic acetylcholine receptor alpha-7 chain precursor, neuronal; missing exon/gene?
Adh MAGPIE polyA_signal 583041 583046 . - 0 MAGPIE_ID "dm_013_GS_dna_7"
Adh calypso tandemrepeat 583460 583477 . + 1 MAGPIE_CTG "dm_013" # 9 x AT
Adh MAGPIE exon 584140 584372 0.603 - 0 MAGPIE_ID "dm_013_GS_dna_7" #dm_013_GS_7.04
Adh MAGPIE exon 584997 585142 0.840 - 1 MAGPIE_ID "dm_013_GS_dna_7" #dm_013_GS_7.03
Adh calypso tandemrepeat 589692 589709 . + 2 MAGPIE_CTG "dm_013" # 6 x TGT
Adh calypso tandemrepeat 589692 589709 . + 2 MAGPIE_CTG "dm_014" # 6 x TGT
Adh MAGPIE exon 589462 589731 0.976 + 0 MAGPIE_ID "dm_014_GS_dna_1" #dm_014_GS_1.01
Adh MAGPIE gene 589462 589731 . + 0 MAGPIE_ID "dm_014_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 589538 589792 0.374 - 1 MAGPIE_ID "dm_013_GS_dna_7" #dm_013_GS_7.02
Adh MAGPIE exon 589807 589934 0.815 - 0 MAGPIE_ID "dm_013_GS_dna_7" #dm_013_GS_7.01
Adh MAGPIE gene 584140 589934 3 - 0 MAGPIE_ID "dm_013_GS_dna_7" # DE super cysteine rich protein; SCRP (46 aa);ST putative;TY single function;CC Homology only to c-rich region; repetitive and non-informative.;
Adh calypso tandemrepeat 591168 591191 . + 2 MAGPIE_CTG "dm_014" # 12 x CA
Adh calypso tandemrepeat 591549 591564 . + 2 MAGPIE_CTG "dm_014" # 8 x AC
Adh MAGPIE polyA_signal 591840 591845 . + 2 MAGPIE_ID "dm_014_GS_dna_1"
Adh MAGPIE polyA_signal 592228 592233 . - 2 MAGPIE_ID "dm_014_GS_dna_2"
Adh MAGPIE exon 593654 594150 0.998 - 2 MAGPIE_ID "dm_014_GS_dna_2" #dm_014_GS_2.03
Adh MAGPIE exon 594203 594239 0.652 - 0 MAGPIE_ID "dm_014_GS_dna_2" #dm_014_GS_2.02
Adh calypso tandemrepeat 594324 594339 . + 2 MAGPIE_CTG "dm_014" # 8 x TG
Adh MAGPIE exon 594435 594638 0.612 - 0 MAGPIE_ID "dm_014_GS_dna_2" #dm_014_GS_2.01
Adh MAGPIE gene 593654 594638 . + 1 MAGPIE_ID "dm_014_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 594652 594691 . - 1 MAGPIE_ID "dm_014_GS_dna_2"
Adh MAGPIE promotor 596223 596262 . + 2 MAGPIE_ID "dm_014_GS_dna_3"
Adh MAGPIE exon 598403 598796 0.999 + 1 MAGPIE_ID "dm_014_GS_dna_3" #dm_014_GS_3.01
Adh MAGPIE exon 598857 599119 0.999 + 2 MAGPIE_ID "dm_014_GS_dna_3" #dm_014_GS_3.02
Adh calypso tandemrepeat 599735 599752 . + 1 MAGPIE_CTG "dm_014" # 3 x CAGTCA
Adh MAGPIE exon 599219 600433 0.998 + 1 MAGPIE_ID "dm_014_GS_dna_3" #dm_014_GS_3.03
Adh MAGPIE gene 598403 600433 3 + 1 MAGPIE_ID "dm_014_GS_dna_3" # DE hypothetical protein vsp-3 (473 aa);ST putative;TY single function;CC No exact match in Drosophila; Homology is to p-rich repetitive region;
Adh MAGPIE polyA_signal 601510 601515 . + 0 MAGPIE_ID "dm_014_GS_dna_3"
Adh calypso tandemrepeat 601674 601693 . + 2 MAGPIE_CTG "dm_014" # 10 x AT
Adh MAGPIE polyA_signal 601829 601834 . - 1 MAGPIE_ID "dm_014_GS_dna_4"
Adh MAGPIE exon 601945 603000 0.926 - 2 MAGPIE_ID "dm_014_GS_dna_4" #dm_014_GS_4.01
Adh MAGPIE gene 601945 603000 1 + 0 MAGPIE_ID "dm_014_GS_dna_4" # DE HL03474.5prime EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE promotor 603345 603384 . - 2 MAGPIE_ID "dm_014_GS_dna_4"
Adh MAGPIE polyA_signal 603428 603433 . - 1 MAGPIE_ID "dm_014_GS_dna_5"
Adh MAGPIE exon 603442 604311 0.606 - 2 MAGPIE_ID "dm_014_GS_dna_5" #dm_014_GS_5.01
Adh MAGPIE gene 603442 604311 1 + 0 MAGPIE_ID "dm_014_GS_dna_5" # DE GH26907.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 604512 604551 . - 2 MAGPIE_ID "dm_014_GS_dna_5"
Adh calypso tandemrepeat 604540 604555 . + 0 MAGPIE_CTG "dm_014" # 8 x TA
Adh MAGPIE promotor 604553 604592 . + 1 MAGPIE_ID "dm_014_GS_dna_6"
Adh MAGPIE exon 605575 605733 0.649 + 0 MAGPIE_ID "dm_014_GS_dna_6" #dm_014_GS_6.01
Adh calypso tandemrepeat 606257 606272 . + 1 MAGPIE_CTG "dm_014" # 8 x TG
Adh MAGPIE exon 606284 606390 0.666 + 1 MAGPIE_ID "dm_014_GS_dna_6" #dm_014_GS_6.02
Adh calypso tandemrepeat 607358 607377 . + 1 MAGPIE_CTG "dm_014" # 10 x TG
Adh MAGPIE exon 607399 607831 0.263 + 0 MAGPIE_ID "dm_014_GS_dna_6" #dm_014_GS_6.03
Adh MAGPIE gene 605575 607831 . + 0 MAGPIE_ID "dm_014_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 607856 607872 . + 1 MAGPIE_CTG "dm_014" # 17 x A
Adh MAGPIE polyA_signal 608904 608909 . + 2 MAGPIE_ID "dm_014_GS_dna_6"
Adh MAGPIE promotor 609055 609094 . + 0 MAGPIE_ID "dm_014_GS_dna_7"
Adh calypso tandemrepeat 609272 609287 . + 1 MAGPIE_CTG "dm_014" # 8 x CA
Adh calypso tandemrepeat 609701 609726 . + 1 MAGPIE_CTG "dm_014" # 13 x CA
Adh MAGPIE exon 609887 610112 0.923 + 1 MAGPIE_ID "dm_014_GS_dna_7" #dm_014_GS_7.01
Adh MAGPIE exon 610286 610466 0.978 + 1 MAGPIE_ID "dm_014_GS_dna_7" #dm_014_GS_7.02
Adh MAGPIE exon 611385 611481 0.969 + 2 MAGPIE_ID "dm_014_GS_dna_7" #dm_014_GS_7.03
Adh MAGPIE gene 609887 611481 . + 1 MAGPIE_ID "dm_014_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 612566 612571 . + 1 MAGPIE_ID "dm_014_GS_dna_7"
Adh MAGPIE polyA_signal 612883 612888 . - 2 MAGPIE_ID "dm_014_GS_dna_8"
Adh calypso tandemrepeat 612948 612965 . + 2 MAGPIE_CTG "dm_014" # 9 x GT
Adh MAGPIE exon 612900 613381 0.992 - 1 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.09
Adh MAGPIE exon 615333 615618 0.974 - 2 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.08
Adh MAGPIE exon 616137 616184 0.757 - 0 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.07
Adh calypso tandemrepeat 617773 617787 . + 0 MAGPIE_CTG "dm_014" # 15 x T
Adh calypso tandemrepeat 618402 618419 . + 2 MAGPIE_CTG "dm_014" # 9 x GT
Adh calypso tandemrepeat 618655 618670 . + 0 MAGPIE_CTG "dm_014" # 16 x G
Adh MAGPIE exon 619451 619606 0.807 - 1 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.06
Adh MAGPIE exon 619825 619971 0.473 - 2 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.05
Adh calypso tandemrepeat 620005 620022 . + 0 MAGPIE_CTG "dm_014" # 9 x TG
Adh MAGPIE exon 620442 620599 0.796 - 1 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.04
Adh MAGPIE exon 620827 620960 0.760 - 0 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.03
Adh calypso tandemrepeat 622152 622169 . + 2 MAGPIE_CTG "dm_014" # 3 x TTGTAG
Adh calypso tandemrepeat 622509 622530 . + 2 MAGPIE_CTG "dm_014" # 11 x AC
Adh calypso tandemrepeat 622870 622884 . + 0 MAGPIE_CTG "dm_014" # 15 x G
Adh calypso tandemrepeat 622975 622992 . + 0 MAGPIE_CTG "dm_014" # 6 x CTG
Adh MAGPIE exon 622753 623026 0.953 - 1 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.02
Adh MAGPIE exon 623108 623174 0.671 - 0 MAGPIE_ID "dm_014_GS_dna_8" #dm_014_GS_8.01
Adh MAGPIE gene 612900 623174 . + 2 MAGPIE_ID "dm_014_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 623251 623290 . - 1 MAGPIE_ID "dm_014_GS_dna_8"
Adh MAGPIE promotor 623588 623627 . + 1 MAGPIE_ID "dm_014_GS_dna_9"
Adh calypso tandemrepeat 624332 624349 . + 1 MAGPIE_CTG "dm_014" # 9 x CA
Adh calypso tandemrepeat 627015 627039 . + 2 MAGPIE_CTG "dm_014" # 5 x CCAAC
Adh MAGPIE exon 626761 627134 0.617 + 0 MAGPIE_ID "dm_014_GS_dna_9" #dm_014_GS_9.01
Adh MAGPIE exon 627758 628123 0.431 + 1 MAGPIE_ID "dm_014_GS_dna_9" #dm_014_GS_9.02
Adh MAGPIE exon 628666 628884 0.337 + 0 MAGPIE_ID "dm_014_GS_dna_9" #dm_014_GS_9.03
Adh MAGPIE exon 629944 630415 0.230 + 0 MAGPIE_ID "dm_014_GS_dna_9" #dm_014_GS_9.04
Adh MAGPIE gene 626761 630415 . + 0 MAGPIE_ID "dm_014_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 630539 630544 . + 1 MAGPIE_ID "dm_014_GS_dna_9"
Adh calypso tandemrepeat 630667 630681 . + 0 MAGPIE_CTG "dm_014" # 3 x ATTAC
Adh calypso tandemrepeat 630667 630681 . + 0 MAGPIE_CTG "dm_015" # 3 x ATTAC
Adh MAGPIE polyA_signal 630783 630788 . - 0 MAGPIE_ID "dm_015_GS_dna_1"
Adh MAGPIE exon 631257 631455 0.096 - 2 MAGPIE_ID "dm_015_GS_dna_1" #dm_015_GS_1.02
Adh MAGPIE exon 631257 631455 0.332 - 2 MAGPIE_ID "dm_014_GS_dna_10" #dm_014_GS_10.02
Adh MAGPIE exon 632492 632556 0.082 - 2 MAGPIE_ID "dm_015_GS_dna_1" #dm_015_GS_1.01
Adh MAGPIE exon 632492 632556 0.494 - 2 MAGPIE_ID "dm_014_GS_dna_10" #dm_014_GS_10.01
Adh MAGPIE gene 631257 632556 . + 2 MAGPIE_ID "dm_014_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 631257 632556 . + 2 MAGPIE_ID "dm_015_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 634805 634925 0.517 - 0 MAGPIE_ID "dm_014_GS_dna_11" #dm_014_GS_11.01
Adh MAGPIE gene 634805 634925 . + 1 MAGPIE_ID "dm_014_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 635592 635631 . - 2 MAGPIE_ID "dm_015_GS_dna_1"
Adh MAGPIE promotor 638576 638615 . + 1 MAGPIE_ID "dm_015_GS_dna_2"
Adh MAGPIE exon 639175 639414 0.059 + 0 MAGPIE_ID "dm_015_GS_dna_2" #dm_015_GS_2.01
Adh calypso tandemrepeat 649044 649069 . + 2 MAGPIE_CTG "dm_015" # 13 x TG
Adh MAGPIE exon 650611 651153 0.667 + 0 MAGPIE_ID "dm_015_GS_dna_2" #dm_015_GS_2.02
Adh MAGPIE exon 651278 651478 0.999 + 1 MAGPIE_ID "dm_015_GS_dna_2" #dm_015_GS_2.03
Adh MAGPIE exon 651583 652282 0.766 + 0 MAGPIE_ID "dm_015_GS_dna_2" #dm_015_GS_2.04
Adh MAGPIE exon 652397 652824 0.999 + 1 MAGPIE_ID "dm_015_GS_dna_2" #dm_015_GS_2.05
Adh MAGPIE gene 639175 652824 2 + 0 MAGPIE_ID "dm_015_GS_dna_2" # DE hrihfb2255 mRNA (Human);ST putative;TY single function;CC No exact match in Drosophila; good central region match to human mRNA;
Adh MAGPIE polyA_signal 652875 652880 . + 2 MAGPIE_ID "dm_015_GS_dna_2"
Adh MAGPIE polyA_signal 653437 653442 . - 2 MAGPIE_ID "dm_015_GS_dna_3"
Adh reputer repeat 655778 655860 . + . REPEAT "63" # maximal forward repeat
Adh reputer repeat 655799 655864 . + . REPEAT "33" # maximal forward repeat
Adh reputer repeat 655891 655941 . + . REPEAT "58" # maximal forward repeat
Adh reputer repeat 655893 655979 . + . REPEAT "17" # maximal forward repeat
Adh reputer repeat 655891 655991 . + . REPEAT "57" # maximal forward repeat
Adh reputer repeat 656024 656085 . + . REPEAT "34" # maximal forward repeat
Adh reputer repeat 656024 656089 . + . REPEAT "33" # maximal forward repeat
Adh reputer repeat 656118 656204 . + . REPEAT "17" # maximal forward repeat
Adh reputer repeat 656118 656204 . + . REPEAT "18" # maximal forward repeat
Adh reputer repeat 656228 656310 . + . REPEAT "63" # maximal forward repeat
Adh reputer repeat 656249 656310 . + . REPEAT "34" # maximal forward repeat
Adh reputer repeat 656206 656391 . + . REPEAT "51" # maximal forward repeat
Adh reputer repeat 656343 656429 . + . REPEAT "18" # maximal forward repeat
Adh reputer repeat 656341 656441 . + . REPEAT "57" # maximal forward repeat
Adh reputer repeat 656453 656535 . + . REPEAT "63" # maximal forward repeat
Adh reputer repeat 656474 656535 . + . REPEAT "34" # maximal forward repeat
Adh reputer repeat 656431 656616 . + . REPEAT "51" # maximal forward repeat
Adh reputer repeat 656566 656616 . + . REPEAT "58" # maximal forward repeat
Adh MAGPIE exon 654984 656741 0.753 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.09
Adh MAGPIE exon 656952 657179 0.863 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.08
Adh MAGPIE exon 657754 658001 0.435 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.07
Adh MAGPIE exon 658058 658265 0.932 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.06
Adh MAGPIE exon 658326 658463 0.999 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.05
Adh calypso tandemrepeat 659049 659069 . + 2 MAGPIE_CTG "dm_015" # 7 x GTG
Adh MAGPIE exon 658526 660852 0.801 - 2 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.04
Adh calypso tandemrepeat 661041 661055 . + 2 MAGPIE_CTG "dm_015" # 5 x CTG
Adh calypso tandemrepeat 661129 661146 . + 0 MAGPIE_CTG "dm_015" # 6 x TGC
Adh MAGPIE exon 660917 661331 0.731 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.03
Adh MAGPIE exon 662256 662303 0.628 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.02
Adh calypso tandemrepeat 669576 669602 . + 2 MAGPIE_CTG "dm_015" # 9 x GCA
Adh MAGPIE exon 669489 669698 0.211 - 0 MAGPIE_ID "dm_015_GS_dna_3" #dm_015_GS_3.01
Adh MAGPIE gene 654984 669698 2 + 2 MAGPIE_ID "dm_015_GS_dna_3" # DE mucin 2, intestinal/ (5179 aa);ST putative;TY single function;CC No exact match in Drosophila; matches are to t-rich repetitive region;
Adh calypso tandemrepeat 669827 669844 . + 1 MAGPIE_CTG "dm_015" # 3 x TGCTAT
Adh MAGPIE promotor 670753 670792 . - 1 MAGPIE_ID "dm_015_GS_dna_3"
Adh MAGPIE promotor 671105 671144 . + 1 MAGPIE_ID "dm_015_GS_dna_4"
Adh MAGPIE exon 672131 672241 0.792 + 1 MAGPIE_ID "dm_015_GS_dna_4" #dm_015_GS_4.01
Adh calypso tandemrepeat 676949 676966 . + 1 MAGPIE_CTG "dm_015" # 3 x GATCAT
Adh calypso tandemrepeat 676949 676966 . + 1 MAGPIE_CTG "dm_016" # 3 x GATCAT
Adh MAGPIE exon 676698 676982 0.419 + 2 MAGPIE_ID "dm_016_GS_dna_1" #dm_016_GS_1.01
Adh MAGPIE gene 676698 676982 . - 0 MAGPIE_ID "dm_016_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 677003 677008 . + 1 MAGPIE_ID "dm_016_GS_dna_1"
Adh MAGPIE polyA_signal 677371 677376 . - 2 MAGPIE_ID "dm_016_GS_dna_2"
Adh MAGPIE exon 679806 679984 0.016 + 2 MAGPIE_ID "dm_015_GS_dna_4" #dm_015_GS_4.02
Adh MAGPIE gene 672131 679984 3 + 1 MAGPIE_ID "dm_015_GS_dna_4" # DE CK02015.5prime CK EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 679874 680889 0.975 - 2 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.11
Adh calypso tandemrepeat 680908 680923 . + 0 MAGPIE_CTG "dm_016" # 4 x AAGT
Adh MAGPIE exon 682600 682771 0.790 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.10
Adh MAGPIE exon 682831 682969 0.977 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.09
Adh MAGPIE exon 683154 683228 0.078 - 0 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.08
Adh calypso tandemrepeat 687118 687135 . + 0 MAGPIE_CTG "dm_016" # 9 x CA
Adh MAGPIE exon 687135 687323 0.104 - 0 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.07
Adh MAGPIE exon 687902 688024 0.301 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.06
Adh calypso tandemrepeat 688329 688343 . + 2 MAGPIE_CTG "dm_016" # 15 x T
Adh MAGPIE exon 689469 689746 0.897 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.05
Adh MAGPIE exon 689811 689983 0.999 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.04
Adh calypso tandemrepeat 690828 690842 . + 2 MAGPIE_CTG "dm_016" # 5 x TGT
Adh MAGPIE exon 690663 691097 0.998 - 0 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.03
Adh MAGPIE exon 691393 691603 0.116 - 1 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.02
Adh calypso tandemrepeat 691711 691731 . + 0 MAGPIE_CTG "dm_016" # 7 x ATA
Adh MAGPIE exon 694449 694667 0.085 - 0 MAGPIE_ID "dm_016_GS_dna_2" #dm_016_GS_2.01
Adh MAGPIE gene 679874 694667 1 - 0 MAGPIE_ID "dm_016_GS_dna_2" # DE SERINE/THREONINE protein (843 aa);ST putative;TY single function;CC No exact matches in Drosophila; has extra exons compared to homologues;
Adh MAGPIE promotor 695136 695175 . - 2 MAGPIE_ID "dm_016_GS_dna_2"
Adh MAGPIE promotor 696259 696298 . + 0 MAGPIE_ID "dm_016_GS_dna_3"
Adh MAGPIE exon 696358 696502 0.719 + 0 MAGPIE_ID "dm_016_GS_dna_3" #dm_016_GS_3.01
Adh calypso tandemrepeat 697796 697811 . + 1 MAGPIE_CTG "dm_016" # 8 x TG
Adh calypso tandemrepeat 704064 704083 . + 2 MAGPIE_CTG "dm_016" # 4 x ACTCC
Adh calypso tandemrepeat 704275 704290 . + 0 MAGPIE_CTG "dm_016" # 4 x ATCT
Adh MAGPIE exon 703834 704312 0.178 + 0 MAGPIE_ID "dm_016_GS_dna_3" #dm_016_GS_3.02
Adh MAGPIE gene 696358 704312 . - 0 MAGPIE_ID "dm_016_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 704607 704612 . + 2 MAGPIE_ID "dm_016_GS_dna_3"
Adh MAGPIE polyA_signal 705820 705825 . - 2 MAGPIE_ID "dm_016_GS_dna_4"
Adh calypso tandemrepeat 706091 706105 . + 1 MAGPIE_CTG "dm_016" # 15 x A
Adh MAGPIE exon 708173 708388 0.694 - 1 MAGPIE_ID "dm_016_GS_dna_4" #dm_016_GS_4.01
Adh MAGPIE gene 708173 708388 . - 1 MAGPIE_ID "dm_016_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 710055 710094 . - 2 MAGPIE_ID "dm_016_GS_dna_4"
Adh calypso tandemrepeat 710193 710219 . + 2 MAGPIE_CTG "dm_016" # 9 x TAT
Adh MAGPIE polyA_signal 710322 710327 . - 0 MAGPIE_ID "dm_016_GS_dna_5"
Adh calypso tandemrepeat 710810 710824 . + 1 MAGPIE_CTG "dm_016" # 15 x A
Adh calypso tandemrepeat 711842 711859 . + 1 MAGPIE_CTG "dm_016" # 3 x GTCGTT
Adh MAGPIE exon 711768 711933 0.002 - 2 MAGPIE_ID "dm_016_GS_dna_5" #dm_016_GS_5.03
Adh calypso tandemrepeat 712971 712988 . + 2 MAGPIE_CTG "dm_016" # 9 x GT
Adh calypso tandemrepeat 717661 717675 . + 0 MAGPIE_CTG "dm_016" # 3 x GCCAA
Adh MAGPIE exon 719956 720148 0.001 - 1 MAGPIE_ID "dm_016_GS_dna_5" #dm_016_GS_5.02
Adh calypso tandemrepeat 720535 720552 . + 0 MAGPIE_CTG "dm_016" # 18 x T
Adh calypso tandemrepeat 720535 720552 . + 0 MAGPIE_CTG "dm_017" # 18 x T
Adh MAGPIE exon 720798 720919 0.392 + 2 MAGPIE_ID "dm_017_GS_dna_1" #dm_017_GS_1.01
Adh MAGPIE exon 721551 721627 0.184 - 1 MAGPIE_ID "dm_016_GS_dna_5" #dm_016_GS_5.01
Adh MAGPIE gene 711768 721627 . - 1 MAGPIE_ID "dm_016_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 723676 723760 0.325 + 0 MAGPIE_ID "dm_017_GS_dna_1" #dm_017_GS_1.02
Adh MAGPIE exon 727112 727283 0.722 + 1 MAGPIE_ID "dm_017_GS_dna_1" #dm_017_GS_1.03
Adh MAGPIE exon 727747 728036 0.751 + 0 MAGPIE_ID "dm_017_GS_dna_1" #dm_017_GS_1.04
Adh MAGPIE gene 720798 728036 . + 2 MAGPIE_ID "dm_017_GS_dna_1" # DE LD02884.5prime LD Drosophila;ST putative;TY single function;
Adh MAGPIE polyA_signal 728185 728190 . + 0 MAGPIE_ID "dm_017_GS_dna_1"
Adh MAGPIE promotor 728598 728637 . + 2 MAGPIE_ID "dm_017_GS_dna_2"
Adh MAGPIE exon 729158 729227 0.841 + 1 MAGPIE_ID "dm_017_GS_dna_2" #dm_017_GS_2.01
Adh MAGPIE exon 730955 731126 0.825 + 1 MAGPIE_ID "dm_017_GS_dna_2" #dm_017_GS_2.02
Adh calypso tandemrepeat 733228 733245 . + 0 MAGPIE_CTG "dm_017" # 18 x A
Adh calypso tandemrepeat 735072 735091 . + 2 MAGPIE_CTG "dm_017" # 4 x TATTA
Adh MAGPIE exon 736960 737185 0.156 + 0 MAGPIE_ID "dm_017_GS_dna_2" #dm_017_GS_2.03
Adh MAGPIE gene 729158 737185 . + 1 MAGPIE_ID "dm_017_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 738599 738604 . + 1 MAGPIE_ID "dm_017_GS_dna_2"
Adh calypso tandemrepeat 738596 738611 . + 1 MAGPIE_CTG "dm_017" # 4 x ATAA
Adh MAGPIE polyA_signal 739318 739323 . - 2 MAGPIE_ID "dm_017_GS_dna_3"
Adh MAGPIE exon 739579 739678 0.113 - 1 MAGPIE_ID "dm_017_GS_dna_3" #dm_017_GS_3.04
Adh calypso tandemrepeat 740801 740815 . + 1 MAGPIE_CTG "dm_017" # 15 x T
Adh calypso tandemrepeat 741415 741429 . + 0 MAGPIE_CTG "dm_017" # 3 x GTAAA
Adh calypso tandemrepeat 743744 743761 . + 1 MAGPIE_CTG "dm_017" # 3 x AAAGCC
Adh MAGPIE exon 745333 745517 0.409 - 0 MAGPIE_ID "dm_017_GS_dna_3" #dm_017_GS_3.03
Adh MAGPIE exon 746912 747144 0.650 - 2 MAGPIE_ID "dm_017_GS_dna_3" #dm_017_GS_3.02
Adh MAGPIE exon 747904 747997 0.840 - 1 MAGPIE_ID "dm_017_GS_dna_3" #dm_017_GS_3.01
Adh MAGPIE gene 739579 747997 . + 0 MAGPIE_ID "dm_017_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 748142 748181 . - 0 MAGPIE_ID "dm_017_GS_dna_3"
Adh MAGPIE promotor 748260 748299 . + 2 MAGPIE_ID "dm_017_GS_dna_4"
Adh MAGPIE exon 749647 749690 0.716 + 0 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.01
Adh MAGPIE exon 750438 750559 0.525 + 2 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.02
Adh MAGPIE exon 754035 754129 0.305 + 2 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.03
Adh MAGPIE exon 754773 754879 0.065 + 2 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.04
Adh MAGPIE exon 755993 756089 0.428 + 1 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.05
Adh MAGPIE exon 756638 756775 0.873 + 1 MAGPIE_ID "dm_017_GS_dna_4" #dm_017_GS_4.06
Adh MAGPIE gene 749647 756775 . + 0 MAGPIE_ID "dm_017_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 756944 756949 . + 1 MAGPIE_ID "dm_017_GS_dna_4"
Adh MAGPIE promotor 757360 757399 . + 0 MAGPIE_ID "dm_017_GS_dna_5"
Adh MAGPIE CDS 757457 757838 . + 1 MAGPIE_ID "dm_019_MP_dna_1" #Initial exon of laminin (3367 aa)
Adh MAGPIE exon 757457 757859 0.861 + 1 MAGPIE_ID "dm_017_GS_dna_5" #dm_017_GS_5.01
Adh calypso tandemrepeat 758073 758098 . + 2 MAGPIE_CTG "dm_017" # 26 x T
Adh MAGPIE exon 758794 759002 0.782 + 0 MAGPIE_ID "dm_017_GS_dna_5" #dm_017_GS_5.02
Adh MAGPIE gene 757457 759002 1 + 1 MAGPIE_ID "dm_017_GS_dna_5" # GN wing blister;DE 1st segment of laminin (3367 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 759383 759388 . + 1 MAGPIE_ID "dm_017_GS_dna_5"
Adh calypso tandemrepeat 759896 759913 . + 1 MAGPIE_CTG "dm_017" # 3 x ATACAG
Adh MAGPIE polyA_signal 760191 760196 . - 0 MAGPIE_ID "dm_017_GS_dna_6"
Adh MAGPIE exon 763337 763772 0.940 - 0 MAGPIE_ID "dm_017_GS_dna_6" #dm_017_GS_6.02
Adh calypso tandemrepeat 765789 765803 . + 2 MAGPIE_CTG "dm_017" # 3 x TCCAT
Adh calypso tandemrepeat 765789 765803 . + 2 MAGPIE_CTG "dm_018" # 3 x TCCAT
Adh calypso tandemrepeat 767787 767802 . + 2 MAGPIE_CTG "dm_017" # 4 x TCTG
Adh calypso tandemrepeat 767787 767802 . + 2 MAGPIE_CTG "dm_018" # 4 x TCTG
Adh calypso tandemrepeat 767944 767958 . + 0 MAGPIE_CTG "dm_017" # 3 x GGTCT
Adh calypso tandemrepeat 767944 767958 . + 0 MAGPIE_CTG "dm_018" # 3 x GGTCT
Adh MAGPIE exon 767844 767989 0.703 - 1 MAGPIE_ID "dm_017_GS_dna_6" #dm_017_GS_6.01
Adh MAGPIE gene 763337 767989 . + 1 MAGPIE_ID "dm_017_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 771216 771615 0.998 + 2 MAGPIE_ID "dm_018_GS_dna_1" #dm_018_GS_1.01
Adh calypso tandemrepeat 772182 772211 . + 2 MAGPIE_CTG "dm_018" # 5 x TCGGGA
Adh MAGPIE CDS 771955 772295 . + 0 MAGPIE_ID "dm_019_MP_dna_1" # Internal exon of laminin
Adh MAGPIE exon 771955 772295 0.999 + 0 MAGPIE_ID "dm_018_GS_dna_1" #dm_018_GS_1.02
Adh calypso tandemrepeat 773325 773348 . + 2 MAGPIE_CTG "dm_018" # 4 x AAAGGC
Adh MAGPIE CDS 779692 781583 . + 0 MAGPIE_ID "dm_019_MP_dna_1" # Internal exon of laminin
Adh MAGPIE exon 779692 781583 0.592 + 0 MAGPIE_ID "dm_018_GS_dna_1" #dm_018_GS_1.03
Adh calypso tandemrepeat 781674 781688 . + 2 MAGPIE_CTG "dm_018" # 3 x AAATT
Adh MAGPIE CDS 781886 782694 . + 1 MAGPIE_ID "dm_019_MP_dna_1" # Internal exon of laminin
Adh MAGPIE exon 781886 782694 0.935 + 1 MAGPIE_ID "dm_018_GS_dna_1" #dm_018_GS_1.04
Adh calypso tandemrepeat 784148 784162 . + 1 MAGPIE_CTG "dm_018" # 5 x AGC
Adh calypso tandemrepeat 784264 784278 . + 0 MAGPIE_CTG "dm_018" # 3 x CCAAG
Adh MAGPIE exon 784250 784398 0.747 + 1 MAGPIE_ID "dm_018_GS_dna_1" #dm_018_GS_1.05
Adh calypso tandemrepeat 784461 784475 . + 2 MAGPIE_CTG "dm_018" # 15 x A
Adh MAGPIE polyA_signal 785200 785205 . + 0 MAGPIE_ID "dm_018_GS_dna_1"
Adh MAGPIE polyA_signal 785378 785383 . - 1 MAGPIE_ID "dm_018_GS_dna_2"
Adh MAGPIE exon 785825 785896 0.460 - 1 MAGPIE_ID "dm_018_GS_dna_2" #dm_018_GS_2.03
Adh MAGPIE exon 786663 786788 0.322 - 0 MAGPIE_ID "dm_018_GS_dna_2" #dm_018_GS_2.02
Adh MAGPIE exon 787968 788261 0.976 - 0 MAGPIE_ID "dm_018_GS_dna_2" #dm_018_GS_2.01
Adh MAGPIE gene 785825 788261 . + 1 MAGPIE_ID "dm_018_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 788466 788505 . - 2 MAGPIE_ID "dm_018_GS_dna_2"
Adh MAGPIE promotor 788613 788652 . + 2 MAGPIE_ID "dm_018_GS_dna_3"
Adh MAGPIE exon 788839 788940 0.856 + 0 MAGPIE_ID "dm_018_GS_dna_3" #dm_018_GS_3.01
Adh MAGPIE exon 789003 789176 0.839 + 2 MAGPIE_ID "dm_018_GS_dna_3" #dm_018_GS_3.02
Adh MAGPIE exon 794575 794793 0.744 + 0 MAGPIE_ID "dm_018_GS_dna_3" #dm_018_GS_3.03
Adh calypso tandemrepeat 796709 796728 . + 1 MAGPIE_CTG "dm_018" # 4 x TCGCA
Adh MAGPIE exon 796482 796994 0.866 + 2 MAGPIE_ID "dm_018_GS_dna_3" #dm_018_GS_3.04
Adh MAGPIE gene 788839 796994 . + 0 MAGPIE_ID "dm_018_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 797684 797701 . + 1 MAGPIE_CTG "dm_018" # 3 x CAAAGT
Adh MAGPIE polyA_signal 798030 798035 . + 2 MAGPIE_ID "dm_018_GS_dna_3"
Adh MAGPIE promotor 800772 800811 . + 2 MAGPIE_ID "dm_018_GS_dna_4"
Adh calypso tandemrepeat 802077 802091 . + 2 MAGPIE_CTG "dm_018" # 5 x CAG
Adh calypso tandemrepeat 802572 802589 . + 2 MAGPIE_CTG "dm_018" # 6 x CAG
Adh MAGPIE exon 801894 802914 0.681 + 2 MAGPIE_ID "dm_018_GS_dna_4" #dm_018_GS_4.01
Adh MAGPIE exon 803148 803203 0.949 + 2 MAGPIE_ID "dm_018_GS_dna_4" #dm_018_GS_4.02
Adh MAGPIE exon 804010 804157 0.560 + 0 MAGPIE_ID "dm_018_GS_dna_4" #dm_018_GS_4.03
Adh calypso tandemrepeat 808315 808329 . + 0 MAGPIE_CTG "dm_018" # 3 x TCGGA
Adh MAGPIE CDS 813291 814650 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE exon 813291 814650 0.882 + 2 MAGPIE_ID "dm_018_GS_dna_4" #dm_018_GS_4.04
Adh MAGPIE splice5 814650 814651 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 814725 814726 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 814726 814981 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE exon 814726 814981 0.995 + 0 MAGPIE_ID "dm_018_GS_dna_4" #dm_018_GS_4.05
Adh MAGPIE gene 771216 814981 1 + 2 MAGPIE_ID "dm_018_GS_dna_1" # GN wing blister;DE 2nd segment of laminin (3367 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE gene 801894 814981 1 + 2 MAGPIE_ID "dm_018_GS_dna_4" # DE laminin (3367 aa);ST putative;TY single function;CC First half of this protein is wrong; 2nd half matches central portion of laminin;
Adh MAGPIE splice5 814981 814982 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 815045 815046 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 815046 815442 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 815442 815443 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 815527 815528 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 815528 817215 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 817215 817216 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 817272 817273 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 817273 818025 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 818025 818026 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 818085 818086 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 818086 818367 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 818367 818368 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 818446 818447 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 818447 818574 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 818574 818575 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 818632 818633 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 818633 819290 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 819290 819291 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 820170 820171 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 820171 820789 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 820789 820790 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 820845 820846 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 820846 820979 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 820979 820980 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 821036 821037 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 821037 821265 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice5 821265 821266 . + 2 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE splice3 821332 821333 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE CDS 821333 821487 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE gene 813291 821487 1 + 2 MAGPIE_ID "dm_019_MP_dna_1" # GN wing blister;DE 3rd segment of laminin (3367 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE stop_codon 821485 821487 . + 0 MAGPIE_ID "dm_019_MP_dna_1"
Adh MAGPIE polyA_signal 821966 821971 . + 1 MAGPIE_ID "dm_019_MP_dna_1"
Adh calypso tandemrepeat 821966 821980 . + 1 MAGPIE_CTG "dm_019" # 3 x AATAA
Adh MAGPIE promotor 822027 822066 . + 2 MAGPIE_ID "dm_019_GS_dna_2"
Adh MAGPIE exon 822205 822454 0.999 + 0 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.01
Adh MAGPIE exon 822511 822848 0.997 + 0 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.02
Adh MAGPIE exon 822874 824011 0.864 + 0 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.03
Adh MAGPIE exon 824074 824822 0.997 + 0 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.04
Adh MAGPIE exon 824885 825688 0.942 + 1 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.05
Adh MAGPIE exon 825804 826423 0.996 + 2 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.06
Adh MAGPIE exon 826499 826653 0.811 + 1 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.07
Adh MAGPIE exon 826714 826921 0.814 + 0 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.08
Adh MAGPIE exon 826980 827087 0.994 + 2 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.09
Adh MAGPIE exon 827148 827511 0.999 + 2 MAGPIE_ID "dm_019_GS_dna_2" #dm_019_GS_2.10
Adh MAGPIE gene 822205 827511 . + 0 MAGPIE_ID "dm_019_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 827574 827579 . + 2 MAGPIE_ID "dm_019_GS_dna_2"
Adh MAGPIE promotor 827707 827746 . + 0 MAGPIE_ID "dm_019_GS_dna_3"
Adh MAGPIE exon 828047 828306 0.854 + 1 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.01
Adh calypso tandemrepeat 828833 828848 . + 1 MAGPIE_CTG "dm_019" # 8 x AC
Adh calypso tandemrepeat 829935 829954 . + 2 MAGPIE_CTG "dm_019" # 5 x AATA
Adh blastx similarity 832152 832904 3e-11 + 2 MAGPIE_CTG "dm_019" #ZK652.5 protein - Caenorhabditis elegans
Adh calypso tandemrepeat 832947 832961 . + 2 MAGPIE_CTG "dm_019" # 5 x CAG
Adh MAGPIE exon 832073 833668 0.335 + 1 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.02
Adh MAGPIE exon 835043 835312 0.987 + 1 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.03
Adh MAGPIE exon 836514 837106 0.799 + 2 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.04
Adh MAGPIE exon 837173 837428 0.952 + 1 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.05
Adh MAGPIE exon 837486 837859 0.943 + 2 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.06
Adh MAGPIE exon 837919 838152 0.999 + 0 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.07
Adh MAGPIE exon 838217 839076 0.932 + 1 MAGPIE_ID "dm_019_GS_dna_3" #dm_019_GS_3.08
Adh MAGPIE gene 828047 839076 1 + 1 MAGPIE_ID "dm_019_GS_dna_3" # DE R08F11.1 gene product;ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 839500 839505 . + 0 MAGPIE_ID "dm_019_GS_dna_3"
Adh MAGPIE polyA_signal 839529 839534 . - 0 MAGPIE_ID "dm_019_GS_dna_4"
Adh MAGPIE exon 839671 840390 0.985 - 2 MAGPIE_ID "dm_019_GS_dna_4" #dm_019_GS_4.01
Adh MAGPIE gene 839671 840390 1 + 0 MAGPIE_ID "dm_019_GS_dna_4" # DE dvtry-2 trypsin precusor;ST putative;TY single function;CC Good (but not exact) match to Drosophila protein; gene duplication?;
Adh MAGPIE promotor 840424 840463 . - 1 MAGPIE_ID "dm_019_GS_dna_4"
Adh MAGPIE polyA_signal 840968 840973 . - 1 MAGPIE_ID "dm_019_GS_dna_5"
Adh MAGPIE exon 841091 841333 0.984 - 1 MAGPIE_ID "dm_019_GS_dna_5" #dm_019_GS_5.03
Adh MAGPIE exon 841389 841969 0.998 - 1 MAGPIE_ID "dm_019_GS_dna_5" #dm_019_GS_5.02
Adh MAGPIE exon 842034 842442 0.933 - 2 MAGPIE_ID "dm_019_GS_dna_5" #dm_019_GS_5.01
Adh MAGPIE gene 841091 842442 1 + 1 MAGPIE_ID "dm_019_GS_dna_5" # DE LD33443.5prime EST in drosophila;ST putative;TY single function;CC No gene matches, only EST match;
Adh MAGPIE promotor 842815 842854 . - 1 MAGPIE_ID "dm_019_GS_dna_5"
Adh MAGPIE polyA_signal 842866 842871 . - 2 MAGPIE_ID "dm_019_GS_dna_6"
Adh MAGPIE exon 842968 843375 0.941 - 2 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.07
Adh MAGPIE exon 843445 843518 0.696 - 0 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.06
Adh MAGPIE exon 846096 846292 0.687 - 1 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.05
Adh MAGPIE exon 846401 847372 0.670 - 1 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.04
Adh MAGPIE exon 847433 848154 0.989 - 2 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.03
Adh MAGPIE exon 848208 848609 0.999 - 0 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.02
Adh MAGPIE exon 848668 848733 0.467 - 2 MAGPIE_ID "dm_019_GS_dna_6" #dm_019_GS_6.01
Adh MAGPIE gene 842968 848733 1 + 0 MAGPIE_ID "dm_019_GS_dna_6" # DE C. elegans hypothetical protein (754 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 849659 849698 . - 0 MAGPIE_ID "dm_019_GS_dna_6"
Adh MAGPIE promotor 849758 849797 . + 1 MAGPIE_ID "dm_019_MP_dna_7"
Adh calypso tandemrepeat 850690 850704 . + 0 MAGPIE_CTG "dm_019" # 15 x T
Adh calypso tandemrepeat 851045 851059 . + 1 MAGPIE_CTG "dm_019" # 5 x TAA
Adh MAGPIE start_codon 851085 851087 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE CDS 851085 851190 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE splice5 851190 851191 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE splice3 851255 851256 . + 1 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE CDS 851256 851436 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE splice5 851436 851437 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE splice3 851490 851491 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE CDS 851491 851673 . + 0 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE splice5 851673 851674 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh blastx similarity 851276 851737 1e-29 + 1 MAGPIE_CTG "dm_019" #YEAST GTP-BINDING PROTEIN YPT32/YPT11
Adh MAGPIE splice3 851741 851742 . + 1 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE CDS 851742 851919 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE gene 851085 851919 1 + 2 MAGPIE_ID "dm_019_MP_dna_7" # GN Rab14;DE rab14 (ras-related protein);ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 852082 852096 . + 0 MAGPIE_CTG "dm_019" # 15 x A
Adh MAGPIE polyA_signal 852468 852473 . + 2 MAGPIE_ID "dm_019_MP_dna_7"
Adh MAGPIE promotor 852480 852519 . + 2 MAGPIE_ID "dm_019_GS_dna_8"
Adh MAGPIE exon 853119 855014 0.519 + 2 MAGPIE_ID "dm_019_GS_dna_8" #dm_019_GS_8.01
Adh MAGPIE gene 853119 855014 1 + 2 MAGPIE_ID "dm_019_GS_dna_8" # DE udp-n-acetyl-alpha (571 aa);ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE polyA_signal 855127 855132 . + 0 MAGPIE_ID "dm_019_GS_dna_8"
Adh MAGPIE promotor 855323 855362 . + 1 MAGPIE_ID "dm_019_GS_dna_9"
Adh MAGPIE CDS 855874 855922 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 855874 855922 0.938 + 0 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.01
Adh MAGPIE splice5 855922 855923 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE splice3 855981 855982 . + 2 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE CDS 855982 856031 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 855982 856031 0.664 + 0 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.02
Adh MAGPIE splice5 856031 856032 . + 1 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE splice3 856091 856092 . + 1 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE CDS 856092 856876 . + 2 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 856092 856876 0.670 + 2 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.03
Adh MAGPIE splice5 856876 856877 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE splice3 856941 856942 . + 2 MAGPIE_ID "dm_020_MP_dna_1"
Adh tblastx similarity 857048 857441 2e-79 - 0 MAGPIE_CTG "dm_019" #S.pombe chromosome II cosmid c24C6
Adh MAGPIE CDS 856942 858029 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 856942 858029 0.999 + 0 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.04
Adh MAGPIE splice5 858029 858030 . + 1 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE splice3 858108 858109 . + 2 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE CDS 858109 858341 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 858109 858341 0.999 + 0 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.05
Adh MAGPIE splice5 858341 858342 . + 1 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE splice3 858417 858418 . + 2 MAGPIE_ID "dm_020_MP_dna_1"
Adh tblastx similarity 857033 858789 2e-06 + 1 MAGPIE_CTG "dm_019" #Homo sapiens mutS (E. coli) homolog 3 (MSH3) mRNA
Adh MAGPIE CDS 858418 858966 . + 0 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE exon 858418 858966 0.997 + 0 MAGPIE_ID "dm_019_GS_dna_9" #dm_019_GS_9.06
Adh MAGPIE gene 855874 858966 1 + 0 MAGPIE_ID "dm_019_GS_dna_9" # GN Spellchecker1;DE DNA mismatch repair protein spellchecker1;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE gene 855874 858966 1 + 0 MAGPIE_ID "dm_020_MP_dna_1" # GN Spellchecker1;DE DNA mismatch repair protein spellchecker1;ST putative;TY single function;CC Look at FlyBase entry. Single base pair insertion at 855998 shifts the transcript out of reading frame. Sequencing error?;
Adh MAGPIE polyA_signal 859264 859269 . + 0 MAGPIE_ID "dm_019_GS_dna_9"
Adh MAGPIE exon 859408 859527 0.497 - 2 MAGPIE_ID "dm_019_GS_dna_10" #dm_019_GS_10.01
Adh MAGPIE gene 859408 859527 1 + 0 MAGPIE_ID "dm_019_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 861113 861118 . + 1 MAGPIE_ID "dm_020_MP_dna_1"
Adh MAGPIE polyA_signal 861253 861258 . - 2 MAGPIE_ID "dm_020_GS_dna_2"
Adh MAGPIE exon 862461 862656 0.885 - 2 MAGPIE_ID "dm_020_GS_dna_2" #dm_020_GS_2.03
Adh MAGPIE exon 864846 865018 0.445 - 1 MAGPIE_ID "dm_020_GS_dna_2" #dm_020_GS_2.02
Adh MAGPIE exon 865295 865345 0.355 - 1 MAGPIE_ID "dm_020_GS_dna_2" #dm_020_GS_2.01
Adh MAGPIE gene 862461 865345 . - 1 MAGPIE_ID "dm_020_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 869815 869854 . - 1 MAGPIE_ID "dm_020_GS_dna_2"
Adh MAGPIE polyA_signal 870589 870594 . - 2 MAGPIE_ID "dm_020_GS_dna_3"
Adh MAGPIE exon 870684 870860 0.501 - 0 MAGPIE_ID "dm_020_GS_dna_3" #dm_020_GS_3.01
Adh MAGPIE gene 870684 870860 3 - 0 MAGPIE_ID "dm_020_GS_dna_3" # DE E1L - smallpox (312 aa);ST putative;TY single function;CC Matches only highly repetitive regions in proteins from other species;
Adh MAGPIE promotor 872057 872096 . - 0 MAGPIE_ID "dm_020_GS_dna_3"
Adh MAGPIE polyA_signal 872413 872418 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 872557 872818 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 872818 872819 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 872890 872891 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 872891 873131 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 873131 873132 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 873190 873191 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 873191 873321 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 873321 873322 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 873387 873388 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 873388 873527 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 873527 873528 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 873582 873583 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 873583 874093 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 874093 874094 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 874277 874278 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 874278 874541 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice5 874541 874542 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE splice3 874598 874599 . - 2 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE CDS 874599 874870 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE gene 872557 874870 1 - 1 MAGPIE_ID "dm_020_MP_dna_4" # DE drosophila multidendritic neurons sodium channel 1 (606 aa);ST putative;TY single function;
Adh MAGPIE start_codon 874868 874870 . - 1 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE promotor 874904 874943 . - 0 MAGPIE_ID "dm_020_MP_dna_4"
Adh MAGPIE promotor 875143 875182 . + 0 MAGPIE_ID "dm_020_GS_dna_5"
Adh MAGPIE exon 875603 875970 0.313 + 1 MAGPIE_ID "dm_020_GS_dna_5" #dm_020_GS_5.01
Adh calypso tandemrepeat 877842 877859 . + 2 MAGPIE_CTG "dm_020" # 3 x TGCAGT
Adh calypso tandemrepeat 879111 879140 . + 2 MAGPIE_CTG "dm_020" # 15 x CT
Adh MAGPIE exon 879960 880326 0.752 + 2 MAGPIE_ID "dm_020_GS_dna_5" #dm_020_GS_5.02
Adh MAGPIE gene 875603 880326 . - 2 MAGPIE_ID "dm_020_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 880688 880693 . + 1 MAGPIE_ID "dm_020_GS_dna_5"
Adh MAGPIE polyA_signal 880733 880738 . - 1 MAGPIE_ID "dm_020_GS_dna_6"
Adh MAGPIE exon 880859 881091 0.402 - 2 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.07
Adh calypso tandemrepeat 881602 881616 . + 0 MAGPIE_CTG "dm_020" # 3 x GCATC
Adh calypso tandemrepeat 881685 881699 . + 2 MAGPIE_CTG "dm_020" # 3 x ATCAA
Adh MAGPIE exon 883002 883191 0.209 - 2 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.06
Adh MAGPIE exon 884810 884937 0.453 - 2 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.05
Adh MAGPIE exon 885047 885736 0.928 - 1 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.04
Adh calypso tandemrepeat 886116 886133 . + 2 MAGPIE_CTG "dm_020" # 3 x GCCGCT
Adh calypso tandemrepeat 886492 886509 . + 0 MAGPIE_CTG "dm_020" # 6 x TGC
Adh MAGPIE exon 885967 886798 0.724 - 1 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.03
Adh MAGPIE exon 888067 888286 0.074 - 1 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.02
Adh calypso tandemrepeat 889369 889385 . + 0 MAGPIE_CTG "dm_020" # 17 x A
Adh calypso tandemrepeat 889677 889691 . + 2 MAGPIE_CTG "dm_020" # 3 x TGATT
Adh calypso tandemrepeat 890317 890334 . + 0 MAGPIE_CTG "dm_020" # 6 x TTG
Adh calypso tandemrepeat 892159 892182 . + 0 MAGPIE_CTG "dm_020" # 4 x GTTGCT
Adh calypso tandemrepeat 892925 892940 . + 1 MAGPIE_CTG "dm_020" # 4 x ATCT
Adh calypso tandemrepeat 893320 893334 . + 0 MAGPIE_CTG "dm_020" # 15 x A
Adh calypso tandemrepeat 899819 899843 . + 1 MAGPIE_CTG "dm_020" # 5 x CCAAA
Adh calypso tandemrepeat 900010 900029 . + 0 MAGPIE_CTG "dm_020" # 5 x GACT
Adh calypso tandemrepeat 900010 900029 . + 0 MAGPIE_CTG "dm_021" # 5 x GACT
Adh MAGPIE polyA_signal 900163 900168 . - 2 MAGPIE_ID "dm_021_GS_dna_1"
Adh calypso tandemrepeat 901102 901119 . + 0 MAGPIE_CTG "dm_020" # 9 x GT
Adh calypso tandemrepeat 901102 901119 . + 0 MAGPIE_CTG "dm_021" # 9 x GT
Adh MAGPIE exon 901332 901495 0.200 - 1 MAGPIE_ID "dm_020_GS_dna_6" #dm_020_GS_6.01
Adh MAGPIE gene 880859 901495 3 - 1 MAGPIE_ID "dm_020_GS_dna_6" # DE zinc finger protein nocA - frui (537 aa);ST putative;TY single function;CC No exact matches; matches a-rich Drosophila protein.;
Adh MAGPIE promotor 901658 901697 . - 0 MAGPIE_ID "dm_020_GS_dna_6"
Adh MAGPIE polyA_signal 902174 902179 . - 1 MAGPIE_ID "dm_020_GS_dna_7"
Adh MAGPIE exon 903291 903472 0.846 - 1 MAGPIE_ID "dm_020_GS_dna_7" #dm_020_GS_7.02
Adh MAGPIE exon 903291 903472 0.904 - 1 MAGPIE_ID "dm_021_GS_dna_1" #dm_021_GS_1.02
Adh MAGPIE exon 904075 904120 0.904 - 1 MAGPIE_ID "dm_021_GS_dna_1" #dm_021_GS_1.01
Adh MAGPIE exon 904075 904120 0.920 - 1 MAGPIE_ID "dm_020_GS_dna_7" #dm_020_GS_7.01
Adh MAGPIE gene 903291 904120 . + 2 MAGPIE_ID "dm_021_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 903291 904120 . - 1 MAGPIE_ID "dm_020_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 908811 908850 . - 2 MAGPIE_ID "dm_021_GS_dna_1"
Adh calypso tandemrepeat 910341 910355 . + 2 MAGPIE_CTG "dm_021" # 3 x TTAAT
Adh MAGPIE polyA_signal 910390 910395 . - 2 MAGPIE_ID "dm_021_GS_dna_2"
Adh MAGPIE exon 910572 910742 0.859 - 0 MAGPIE_ID "dm_021_GS_dna_2" #dm_021_GS_2.02
Adh MAGPIE exon 910801 911055 0.909 - 2 MAGPIE_ID "dm_021_GS_dna_2" #dm_021_GS_2.01
Adh MAGPIE gene 910572 911055 . + 2 MAGPIE_ID "dm_021_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 911080 911119 . - 1 MAGPIE_ID "dm_021_GS_dna_2"
Adh MAGPIE promotor 913861 913900 . + 0 MAGPIE_ID "dm_021_GS_dna_3"
Adh MAGPIE exon 914313 914373 0.768 + 2 MAGPIE_ID "dm_021_GS_dna_3" #dm_021_GS_3.01
Adh calypso tandemrepeat 914388 914402 . + 2 MAGPIE_CTG "dm_021" # 3 x AGTCG
Adh MAGPIE exon 915101 915384 0.631 + 1 MAGPIE_ID "dm_021_GS_dna_3" #dm_021_GS_3.02
Adh MAGPIE gene 914313 915384 . + 2 MAGPIE_ID "dm_021_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 916539 916544 . + 2 MAGPIE_ID "dm_021_GS_dna_3"
Adh MAGPIE polyA_signal 916946 916951 . - 1 MAGPIE_ID "dm_021_GS_dna_4"
Adh MAGPIE exon 918151 918795 0.970 - 2 MAGPIE_ID "dm_021_GS_dna_4" #dm_021_GS_4.02
Adh MAGPIE exon 918858 918869 0.980 - 0 MAGPIE_ID "dm_021_GS_dna_4" #dm_021_GS_4.01
Adh MAGPIE gene 918151 918869 2 + 0 MAGPIE_ID "dm_021_GS_dna_4" # DE cuticle protein;ST putative;TY single function;CC No exact match; level 3 match to Drosophila protein; gene duplication?;
Adh MAGPIE promotor 918940 918979 . - 1 MAGPIE_ID "dm_021_GS_dna_4"
Adh MAGPIE polyA_signal 919120 919125 . - 2 MAGPIE_ID "dm_021_GS_dna_5"
Adh calypso tandemrepeat 919523 919537 . + 1 MAGPIE_CTG "dm_021" # 3 x ATCCC
Adh MAGPIE exon 920331 920644 0.986 - 1 MAGPIE_ID "dm_021_GS_dna_5" #dm_021_GS_5.02
Adh calypso tandemrepeat 920663 920680 . + 1 MAGPIE_CTG "dm_021" # 6 x CAG
Adh MAGPIE exon 921666 921726 0.639 - 2 MAGPIE_ID "dm_021_GS_dna_5" #dm_021_GS_5.01
Adh MAGPIE gene 920331 921726 . + 2 MAGPIE_ID "dm_021_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 922035 922074 . - 2 MAGPIE_ID "dm_021_GS_dna_5"
Adh MAGPIE promotor 923467 923506 . + 0 MAGPIE_ID "dm_021_GS_dna_6"
Adh MAGPIE exon 925331 925384 0.526 + 1 MAGPIE_ID "dm_021_GS_dna_6" #dm_021_GS_6.01
Adh calypso tandemrepeat 926131 926151 . + 0 MAGPIE_CTG "dm_021" # 7 x GCA
Adh MAGPIE exon 925992 926161 0.770 + 2 MAGPIE_ID "dm_021_GS_dna_6" #dm_021_GS_6.02
Adh MAGPIE exon 926551 926656 0.462 + 0 MAGPIE_ID "dm_021_GS_dna_6" #dm_021_GS_6.03
Adh MAGPIE gene 925331 926656 . + 1 MAGPIE_ID "dm_021_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 927054 927059 . + 2 MAGPIE_ID "dm_021_GS_dna_6"
Adh MAGPIE polyA_signal 927137 927142 . - 1 MAGPIE_ID "dm_021_GS_dna_7"
Adh MAGPIE exon 930378 930473 0.637 - 0 MAGPIE_ID "dm_021_GS_dna_7" #dm_021_GS_7.02
Adh calypso tandemrepeat 930584 930607 . + 1 MAGPIE_CTG "dm_021" # 4 x CCCATT
Adh MAGPIE exon 930526 930618 0.406 - 2 MAGPIE_ID "dm_021_GS_dna_7" #dm_021_GS_7.01
Adh MAGPIE gene 930378 930618 . + 2 MAGPIE_ID "dm_021_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 930796 930835 . - 1 MAGPIE_ID "dm_021_GS_dna_7"
Adh MAGPIE promotor 930876 930915 . + 2 MAGPIE_ID "dm_021_GS_dna_8"
Adh MAGPIE exon 930979 931038 0.835 + 0 MAGPIE_ID "dm_021_GS_dna_8" #dm_021_GS_8.01
Adh calypso tandemrepeat 931193 931207 . + 1 MAGPIE_CTG "dm_021" # 3 x AACGA
Adh MAGPIE exon 934141 934218 0.795 + 0 MAGPIE_ID "dm_021_GS_dna_8" #dm_021_GS_8.02
Adh MAGPIE gene 930979 934218 . + 0 MAGPIE_ID "dm_021_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 934845 934850 . + 2 MAGPIE_ID "dm_021_GS_dna_8"
Adh calypso tandemrepeat 936152 936179 . + 1 MAGPIE_CTG "dm_021" # 7 x TATG
Adh MAGPIE promotor 937190 937229 . + 1 MAGPIE_ID "dm_021_GS_dna_9"
Adh MAGPIE exon 937578 937656 0.868 + 2 MAGPIE_ID "dm_021_GS_dna_9" #dm_021_GS_9.01
Adh MAGPIE exon 937700 937847 0.255 + 1 MAGPIE_ID "dm_021_GS_dna_9" #dm_021_GS_9.02
Adh MAGPIE exon 940449 940647 0.690 + 2 MAGPIE_ID "dm_021_GS_dna_9" #dm_021_GS_9.03
Adh MAGPIE gene 937578 940647 . + 2 MAGPIE_ID "dm_021_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 940858 940863 . + 0 MAGPIE_ID "dm_021_GS_dna_9"
Adh MAGPIE exon 941115 941176 0.325 - 1 MAGPIE_ID "dm_021_GS_dna_10" #dm_021_GS_10.05
Adh MAGPIE exon 941646 941731 0.141 - 1 MAGPIE_ID "dm_021_GS_dna_10" #dm_021_GS_10.04
Adh MAGPIE exon 942328 942612 0.242 - 2 MAGPIE_ID "dm_021_GS_dna_10" #dm_021_GS_10.03
Adh MAGPIE exon 943030 943151 0.284 - 0 MAGPIE_ID "dm_021_GS_dna_10" #dm_021_GS_10.02
Adh MAGPIE exon 944233 944598 0.259 - 2 MAGPIE_ID "dm_021_GS_dna_10" #dm_021_GS_10.01
Adh MAGPIE gene 941115 944598 2 + 2 MAGPIE_ID "dm_021_GS_dna_10" # DE GH02883.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 945252 945257 . - 0 MAGPIE_ID "dm_022_GS_dna_1"
Adh MAGPIE exon 945396 945542 0.112 - 0 MAGPIE_ID "dm_022_GS_dna_1" #dm_022_GS_1.02
Adh MAGPIE exon 945396 945542 0.935 - 0 MAGPIE_ID "dm_021_GS_dna_11" #dm_021_GS_11.02
Adh MAGPIE exon 947717 947791 0.281 - 1 MAGPIE_ID "dm_022_GS_dna_1" #dm_022_GS_1.01
Adh MAGPIE exon 947717 947791 0.641 - 1 MAGPIE_ID "dm_021_GS_dna_11" #dm_021_GS_11.01
Adh MAGPIE gene 945396 947791 . + 2 MAGPIE_ID "dm_021_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 945396 947791 . + 2 MAGPIE_ID "dm_022_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 948020 948034 . + 1 MAGPIE_CTG "dm_021" # 3 x TCAGC
Adh calypso tandemrepeat 948020 948034 . + 1 MAGPIE_CTG "dm_022" # 3 x TCAGC
Adh MAGPIE promotor 948459 948498 . - 2 MAGPIE_ID "dm_022_GS_dna_1"
Adh calypso tandemrepeat 949088 949115 . + 1 MAGPIE_CTG "dm_021" # 7 x GATG
Adh calypso tandemrepeat 949088 949115 . + 1 MAGPIE_CTG "dm_022" # 7 x GATG
Adh MAGPIE polyA_signal 949577 949582 . - 1 MAGPIE_ID "dm_022_MP_dna_2"
Adh calypso tandemrepeat 950677 950696 . + 0 MAGPIE_CTG "dm_022" # 10 x TG
Adh calypso tandemrepeat 951654 951668 . + 2 MAGPIE_CTG "dm_022" # 5 x TGT
Adh calypso tandemrepeat 954660 954675 . + 2 MAGPIE_CTG "dm_022" # 16 x A
Adh calypso tandemrepeat 955339 955353 . + 0 MAGPIE_CTG "dm_022" # 3 x TGAGC
Adh calypso tandemrepeat 959024 959038 . + 1 MAGPIE_CTG "dm_022" # 15 x T
Adh calypso tandemrepeat 959377 959393 . + 0 MAGPIE_CTG "dm_022" # 17 x T
Adh reputer repeat 959426 959506 . + . REPEAT "41" # maximal forward repeat
Adh reputer repeat 959498 959628 . + . REPEAT "93" # maximal forward repeat
Adh MAGPIE splice3 959746 959747 . - 0 MAGPIE_ID "dm_022_MP_dna_2"
Adh reputer repeat 959630 959747 . + . REPEAT "60" # maximal forward repeat
Adh MAGPIE CDS 959530 959754 . - 2 MAGPIE_ID "dm_022_MP_dna_2"
Adh MAGPIE splice5 959754 959755 . - 1 MAGPIE_ID "dm_022_MP_dna_2"
Adh MAGPIE CDS 959747 959788 . - 1 MAGPIE_ID "dm_022_MP_dna_2"
Adh MAGPIE splice5 959788 959789 . - 0 MAGPIE_ID "dm_022_MP_dna_2"
Adh calypso tandemrepeat 959936 959960 . + 1 MAGPIE_CTG "dm_022" # 25 x T
Adh calypso tandemrepeat 960528 960542 . + 2 MAGPIE_CTG "dm_022" # 5 x TTA
Adh MAGPIE splice3 961227 961228 . - 1 MAGPIE_ID "dm_022_MP_dna_2"
Adh reputer repeat 961226 961407 . + . REPEAT "31" # maximal forward repeat
Adh reputer repeat 961409 961602 . + . REPEAT "36" # maximal forward repeat
Adh reputer repeat 961604 961856 . + . REPEAT "47" # maximal forward repeat
Adh MAGPIE CDS 961228 962781 . - 2 MAGPIE_ID "dm_022_MP_dna_2"
Adh MAGPIE gene 959530 962781 1 - 2 MAGPIE_ID "dm_022_MP_dna_2" # GN Doc;DE Doc element - putative reverse transcriptase (964 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 966188 966207 . + 1 MAGPIE_CTG "dm_022" # 10 x CA
Adh MAGPIE promotor 967376 967415 . - 0 MAGPIE_ID "dm_022_MP_dna_2"
Adh calypso tandemrepeat 968087 968106 . + 1 MAGPIE_CTG "dm_022" # 10 x GT
Adh calypso tandemrepeat 970545 970559 . + 2 MAGPIE_CTG "dm_022" # 3 x ATTGG
Adh calypso tandemrepeat 971138 971155 . + 1 MAGPIE_CTG "dm_022" # 3 x CGATAA
Adh MAGPIE promotor 971165 971204 . + 1 MAGPIE_ID "dm_022_GS_dna_3"
Adh MAGPIE exon 971207 971303 0.301 + 1 MAGPIE_ID "dm_022_GS_dna_3" #dm_022_GS_3.01
Adh MAGPIE exon 974363 974512 0.018 + 1 MAGPIE_ID "dm_022_GS_dna_3" #dm_022_GS_3.02
Adh MAGPIE exon 976874 977072 0.003 + 1 MAGPIE_ID "dm_022_GS_dna_3" #dm_022_GS_3.03
Adh MAGPIE exon 979878 980124 0.674 + 2 MAGPIE_ID "dm_022_GS_dna_3" #dm_022_GS_3.04
Adh MAGPIE gene 971207 980124 . + 1 MAGPIE_ID "dm_022_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 980134 980139 . + 0 MAGPIE_ID "dm_022_GS_dna_3"
Adh MAGPIE polyA_signal 980141 980146 . - 1 MAGPIE_ID "dm_022_GS_dna_4"
Adh MAGPIE exon 980240 980419 0.571 - 1 MAGPIE_ID "dm_022_GS_dna_4" #dm_022_GS_4.01
Adh MAGPIE gene 980240 980419 . + 1 MAGPIE_ID "dm_022_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 982483 982522 . - 1 MAGPIE_ID "dm_022_GS_dna_4"
Adh MAGPIE promotor 982880 982919 . + 1 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE start_codon 984981 984983 . + 2 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE CDS 984981 985070 . + 2 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE splice5 985070 985071 . + 1 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE splice3 985372 985373 . + 0 MAGPIE_ID "dm_022_MP_dna_5"
Adh calypso tandemrepeat 985994 986008 . + 1 MAGPIE_CTG "dm_022" # 5 x GCA
Adh MAGPIE CDS 985373 986896 . + 1 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE gene 984981 986896 1 + 2 MAGPIE_ID "dm_022_MP_dna_5" # GN no ocelli;DE zinc finger protein nocA - fruit fly (537 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 987547 987552 . + 0 MAGPIE_ID "dm_022_MP_dna_5"
Adh MAGPIE promotor 988533 988572 . + 2 MAGPIE_ID "dm_022_GS_dna_6"
Adh MAGPIE exon 989323 989629 0.446 + 0 MAGPIE_ID "dm_022_GS_dna_6" #dm_022_GS_6.01
Adh reputer repeat 989607 989687 . + . REPEAT "35" # maximal forward repeat
Adh reputer repeat 989608 989687 . + . REPEAT "30" # maximal forward repeat
Adh reputer repeat 989612 989687 . + . REPEAT "138" # maximal palindromic repeat
Adh MAGPIE exon 991190 991278 0.277 + 1 MAGPIE_ID "dm_022_GS_dna_6" #dm_022_GS_6.02
Adh MAGPIE gene 989323 991278 . + 0 MAGPIE_ID "dm_022_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 992179 992184 . + 0 MAGPIE_ID "dm_022_GS_dna_6"
Adh MAGPIE exon 992355 992562 0.594 + 2 MAGPIE_ID "dm_023_GS_dna_1" #dm_023_GS_1.01
Adh MAGPIE polyA_signal 992800 992805 . - 2 MAGPIE_ID "dm_022_GS_dna_7"
Adh MAGPIE exon 993039 993131 0.655 - 0 MAGPIE_ID "dm_022_GS_dna_7" #dm_022_GS_7.02
Adh MAGPIE exon 993183 993498 0.507 - 2 MAGPIE_ID "dm_022_GS_dna_7" #dm_022_GS_7.01
Adh MAGPIE gene 993039 993498 . + 2 MAGPIE_ID "dm_022_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 996046 996180 0.192 + 0 MAGPIE_ID "dm_023_GS_dna_1" #dm_023_GS_1.02
Adh MAGPIE gene 992355 996180 . - 2 MAGPIE_ID "dm_023_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 996320 996325 . + 1 MAGPIE_ID "dm_023_GS_dna_1"
Adh calypso tandemrepeat 996726 996740 . + 2 MAGPIE_CTG "dm_023" # 5 x GGC
Adh MAGPIE promotor 996883 996922 . + 0 MAGPIE_ID "dm_023_GS_dna_2"
Adh MAGPIE exon 997668 997824 0.960 + 2 MAGPIE_ID "dm_023_GS_dna_2" #dm_023_GS_2.01
Adh MAGPIE exon 999440 999546 0.972 + 1 MAGPIE_ID "dm_023_GS_dna_2" #dm_023_GS_2.02
Adh MAGPIE gene 997668 999546 . - 2 MAGPIE_ID "dm_023_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1000301 1000306 . + 1 MAGPIE_ID "dm_023_GS_dna_2"
Adh MAGPIE polyA_signal 1000334 1000339 . - 1 MAGPIE_ID "dm_023_GS_dna_3"
Adh MAGPIE exon 1000753 1000833 0.816 - 2 MAGPIE_ID "dm_023_GS_dna_3" #dm_023_GS_3.04
Adh MAGPIE exon 1001673 1001809 0.864 - 1 MAGPIE_ID "dm_023_GS_dna_3" #dm_023_GS_3.03
Adh calypso tandemrepeat 1002557 1002571 . + 1 MAGPIE_CTG "dm_023" # 3 x AACTC
Adh calypso tandemrepeat 1002591 1002605 . + 2 MAGPIE_CTG "dm_023" # 3 x GAACT
Adh MAGPIE exon 1002590 1002767 0.909 - 0 MAGPIE_ID "dm_023_GS_dna_3" #dm_023_GS_3.02
Adh calypso tandemrepeat 1002776 1002793 . + 1 MAGPIE_CTG "dm_023" # 9 x AG
Adh MAGPIE exon 1003354 1003371 0.867 - 2 MAGPIE_ID "dm_023_GS_dna_3" #dm_023_GS_3.01
Adh MAGPIE gene 1000753 1003371 . - 2 MAGPIE_ID "dm_023_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1004003 1004042 . - 0 MAGPIE_ID "dm_023_GS_dna_3"
Adh MAGPIE promotor 1004644 1004683 . + 0 MAGPIE_ID "dm_023_GS_dna_4"
Adh MAGPIE exon 1004686 1004817 0.878 + 0 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.01
Adh MAGPIE exon 1004898 1005045 0.520 + 2 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.02
Adh calypso tandemrepeat 1005219 1005233 . + 2 MAGPIE_CTG "dm_023" # 5 x CAG
Adh MAGPIE exon 1005107 1005297 0.205 + 1 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.03
Adh calypso tandemrepeat 1005416 1005432 . + 1 MAGPIE_CTG "dm_023" # 17 x T
Adh calypso tandemrepeat 1005865 1005880 . + 0 MAGPIE_CTG "dm_023" # 4 x CTGA
Adh MAGPIE exon 1006442 1006590 0.078 + 1 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.04
Adh MAGPIE exon 1007627 1007813 0.199 + 1 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.05
Adh MAGPIE exon 1010672 1010788 0.471 + 1 MAGPIE_ID "dm_023_GS_dna_4" #dm_023_GS_4.06
Adh MAGPIE gene 1004686 1010788 3 - 1 MAGPIE_ID "dm_023_GS_dna_4" # DE hypothetical protein 1 - african (613 aa);ST putative;TY single function;CC No exact matches; level 3 match to q-rich Drosophila protein;
Adh MAGPIE polyA_signal 1010996 1011001 . + 1 MAGPIE_ID "dm_023_GS_dna_4"
Adh reputer repeat 1011823 1011872 . + . REPEAT "123" # maximal palindromic repeat
Adh reputer repeat 1011823 1011896 . + . REPEAT "122" # maximal palindromic repeat
Adh reputer repeat 1011825 1011896 . + . REPEAT "111" # maximal palindromic repeat
Adh MAGPIE promotor 1011946 1011985 . + 0 MAGPIE_ID "dm_023_GS_dna_5"
Adh reputer repeat 1012041 1012113 . + . REPEAT "85" # maximal forward repeat
Adh reputer repeat 1012042 1012113 . - . REPEAT "111" # maximal palindromic repeat
Adh reputer repeat 1012041 1012115 . + . REPEAT "84" # maximal forward repeat
Adh MAGPIE exon 1012123 1012246 0.875 + 0 MAGPIE_ID "dm_023_GS_dna_5" #dm_023_GS_5.01
Adh reputer repeat 1012354 1012427 . + . REPEAT "90" # maximal forward repeat
Adh reputer repeat 1012355 1012427 . + . REPEAT "85" # maximal forward repeat
Adh reputer repeat 1012356 1012429 . - . REPEAT "122" # maximal palindromic repeat
Adh reputer repeat 1012380 1012431 . + . REPEAT "50" # maximal forward repeat
Adh MAGPIE exon 1013541 1013718 0.014 + 2 MAGPIE_ID "dm_023_GS_dna_5" #dm_023_GS_5.02
Adh calypso tandemrepeat 1014404 1014418 . + 1 MAGPIE_CTG "dm_023" # 3 x CGTTA
Adh calypso tandemrepeat 1015976 1015992 . + 1 MAGPIE_CTG "dm_023" # 17 x T
Adh MAGPIE exon 1016252 1016384 0.009 + 1 MAGPIE_ID "dm_023_GS_dna_5" #dm_023_GS_5.03
Adh MAGPIE gene 1012123 1016384 . - 0 MAGPIE_ID "dm_023_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1016817 1016822 . + 2 MAGPIE_ID "dm_023_GS_dna_5"
Adh MAGPIE promotor 1018041 1018080 . + 2 MAGPIE_ID "dm_023_GS_dna_6"
Adh MAGPIE exon 1018661 1018717 0.072 + 1 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.01
Adh calypso tandemrepeat 1020695 1020709 . + 1 MAGPIE_CTG "dm_023" # 3 x ATAAT
Adh calypso tandemrepeat 1020710 1020724 . + 1 MAGPIE_CTG "dm_023" # 3 x ATATA
Adh calypso tandemrepeat 1021501 1021515 . + 0 MAGPIE_CTG "dm_023" # 15 x T
Adh MAGPIE exon 1023733 1023986 0.003 + 0 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.02
Adh reputer repeat 1024279 1024352 . + . REPEAT "90" # maximal forward repeat
Adh reputer repeat 1024281 1024352 . - . REPEAT "111" # maximal palindromic repeat
Adh reputer repeat 1024280 1024354 . + . REPEAT "84" # maximal forward repeat
Adh reputer repeat 1024613 1024662 . - . REPEAT "123" # maximal palindromic repeat
Adh reputer repeat 1024613 1024664 . + . REPEAT "50" # maximal forward repeat
Adh calypso tandemrepeat 1026809 1026826 . + 1 MAGPIE_CTG "dm_023" # 3 x ATTGCG
Adh MAGPIE exon 1027636 1027728 0.142 + 0 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.03
Adh calypso tandemrepeat 1027847 1027863 . + 1 MAGPIE_CTG "dm_023" # 17 x A
Adh MAGPIE exon 1029258 1029575 0.104 + 2 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.04
Adh MAGPIE exon 1032318 1032417 0.447 + 2 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.05
Adh MAGPIE exon 1034159 1034527 0.628 + 1 MAGPIE_ID "dm_023_GS_dna_6" #dm_023_GS_6.06
Adh MAGPIE gene 1018661 1034527 . - 1 MAGPIE_ID "dm_023_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1034604 1034609 . + 2 MAGPIE_ID "dm_023_GS_dna_6"
Adh MAGPIE polyA_signal 1035226 1035231 . - 2 MAGPIE_ID "dm_023_GS_dna_7"
Adh MAGPIE exon 1035573 1035884 0.715 - 0 MAGPIE_ID "dm_023_GS_dna_7" #dm_023_GS_7.01
Adh MAGPIE exon 1035624 1035884 0.141 - 0 MAGPIE_ID "dm_024_GS_dna_1" #dm_024_GS_1.01
Adh MAGPIE gene 1035573 1035884 . - 0 MAGPIE_ID "dm_023_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 1035624 1035884 . + 2 MAGPIE_ID "dm_024_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1035957 1035996 . - 2 MAGPIE_ID "dm_023_GS_dna_7"
Adh MAGPIE promotor 1035957 1035996 . - 2 MAGPIE_ID "dm_024_GS_dna_1"
Adh MAGPIE polyA_signal 1037911 1037916 . - 2 MAGPIE_ID "dm_023_GS_dna_8"
Adh MAGPIE polyA_signal 1037911 1037916 . - 2 MAGPIE_ID "dm_024_GS_dna_2"
Adh calypso tandemrepeat 1038688 1038702 . + 0 MAGPIE_CTG "dm_023" # 5 x CTA
Adh calypso tandemrepeat 1038688 1038702 . + 0 MAGPIE_CTG "dm_024" # 5 x CTA
Adh MAGPIE exon 1039544 1039700 0.663 - 0 MAGPIE_ID "dm_023_GS_dna_8" #dm_023_GS_8.01
Adh MAGPIE gene 1039544 1039700 . - 0 MAGPIE_ID "dm_023_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1041376 1041530 0.997 - 0 MAGPIE_ID "dm_024_GS_dna_2" #dm_024_GS_2.03
Adh MAGPIE exon 1041602 1041989 0.963 - 0 MAGPIE_ID "dm_024_GS_dna_2" #dm_024_GS_2.02
Adh MAGPIE exon 1042386 1042688 0.998 - 0 MAGPIE_ID "dm_024_GS_dna_2" #dm_024_GS_2.01
Adh MAGPIE gene 1041376 1042688 . + 0 MAGPIE_ID "dm_024_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1042847 1042886 . - 0 MAGPIE_ID "dm_024_GS_dna_2"
Adh MAGPIE promotor 1043276 1043315 . + 1 MAGPIE_ID "dm_024_GS_dna_3"
Adh MAGPIE exon 1044304 1044690 0.932 + 0 MAGPIE_ID "dm_024_GS_dna_3" #dm_024_GS_3.01
Adh MAGPIE gene 1044304 1044690 . + 0 MAGPIE_ID "dm_024_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1045040 1045045 . + 1 MAGPIE_ID "dm_024_GS_dna_3"
Adh calypso tandemrepeat 1045156 1045173 . + 0 MAGPIE_CTG "dm_024" # 3 x GGTCCA
Adh MAGPIE polyA_signal 1045580 1045585 . - 1 MAGPIE_ID "dm_024_GS_dna_4"
Adh MAGPIE exon 1046547 1046945 0.908 - 0 MAGPIE_ID "dm_024_GS_dna_4" #dm_024_GS_4.01
Adh MAGPIE gene 1046547 1046945 . + 2 MAGPIE_ID "dm_024_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1048271 1048310 . - 0 MAGPIE_ID "dm_024_GS_dna_4"
Adh MAGPIE polyA_signal 1048867 1048872 . - 2 MAGPIE_ID "dm_024_GS_dna_5"
Adh MAGPIE exon 1049062 1049603 0.618 - 0 MAGPIE_ID "dm_024_GS_dna_5" #dm_024_GS_5.02
Adh MAGPIE exon 1050773 1050821 0.812 - 0 MAGPIE_ID "dm_024_GS_dna_5" #dm_024_GS_5.01
Adh MAGPIE gene 1049062 1050821 . + 0 MAGPIE_ID "dm_024_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1050896 1050935 . - 0 MAGPIE_ID "dm_024_GS_dna_5"
Adh MAGPIE polyA_signal 1051694 1051699 . - 1 MAGPIE_ID "dm_024_GS_dna_6"
Adh MAGPIE exon 1051748 1051953 0.679 - 2 MAGPIE_ID "dm_024_GS_dna_6" #dm_024_GS_6.02
Adh calypso tandemrepeat 1054544 1054558 . + 1 MAGPIE_CTG "dm_024" # 3 x GCATC
Adh calypso tandemrepeat 1054682 1054706 . + 1 MAGPIE_CTG "dm_024" # 5 x GAACT
Adh MAGPIE exon 1056915 1057314 0.661 - 2 MAGPIE_ID "dm_024_GS_dna_6" #dm_024_GS_6.01
Adh MAGPIE gene 1051748 1057314 1 + 1 MAGPIE_ID "dm_024_GS_dna_6" # DE ubiquitin-conjugating E (152 aa);ST putative;TY single function;CC No exact matches; close match to Drosophila ubiquitin-conjugating E (152 aa); a little missing at the beginning; extra exons at the end.;
Adh MAGPIE promotor 1057745 1057784 . - 0 MAGPIE_ID "dm_024_GS_dna_6"
Adh MAGPIE promotor 1057805 1057844 . + 1 MAGPIE_ID "dm_024_GS_dna_7"
Adh MAGPIE exon 1058247 1058433 0.836 + 2 MAGPIE_ID "dm_024_GS_dna_7" #dm_024_GS_7.01
Adh MAGPIE exon 1060088 1060332 0.747 + 1 MAGPIE_ID "dm_024_GS_dna_7" #dm_024_GS_7.02
Adh MAGPIE exon 1061245 1061553 0.784 + 0 MAGPIE_ID "dm_024_GS_dna_7" #dm_024_GS_7.03
Adh MAGPIE gene 1058247 1061553 . + 2 MAGPIE_ID "dm_024_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1061838 1061843 . + 2 MAGPIE_ID "dm_024_GS_dna_7"
Adh MAGPIE polyA_signal 1061870 1061875 . - 1 MAGPIE_ID "dm_024_GS_dna_8"
Adh calypso tandemrepeat 1062793 1062807 . + 0 MAGPIE_CTG "dm_024" # 3 x GTTGG
Adh MAGPIE exon 1062866 1063004 0.501 - 0 MAGPIE_ID "dm_024_GS_dna_8" #dm_024_GS_8.05
Adh MAGPIE exon 1063308 1063476 0.242 - 2 MAGPIE_ID "dm_024_GS_dna_8" #dm_024_GS_8.04
Adh calypso tandemrepeat 1064755 1064770 . + 0 MAGPIE_CTG "dm_024" # 4 x TCAA
Adh MAGPIE exon 1065198 1065299 0.119 - 0 MAGPIE_ID "dm_024_GS_dna_8" #dm_024_GS_8.03
Adh calypso tandemrepeat 1065563 1065580 . + 1 MAGPIE_CTG "dm_024" # 6 x GCA
Adh MAGPIE exon 1065409 1065697 0.189 - 1 MAGPIE_ID "dm_024_GS_dna_8" #dm_024_GS_8.02
Adh MAGPIE exon 1067215 1067418 0.018 - 2 MAGPIE_ID "dm_024_GS_dna_8" #dm_024_GS_8.01
Adh MAGPIE gene 1062866 1067418 . + 1 MAGPIE_ID "dm_024_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1068041 1068080 . - 0 MAGPIE_ID "dm_024_GS_dna_8"
Adh MAGPIE promotor 1068139 1068178 . + 0 MAGPIE_ID "dm_024_GS_dna_9"
Adh calypso tandemrepeat 1070495 1070514 . + 1 MAGPIE_CTG "dm_024" # 4 x CGAGT
Adh MAGPIE exon 1071033 1071182 0.440 + 2 MAGPIE_ID "dm_024_GS_dna_9" #dm_024_GS_9.01
Adh MAGPIE exon 1071569 1071758 0.599 + 1 MAGPIE_ID "dm_024_GS_dna_9" #dm_024_GS_9.02
Adh MAGPIE exon 1071760 1071884 0.643 + 0 MAGPIE_ID "dm_024_GS_dna_9" #dm_024_GS_9.03
Adh MAGPIE gene 1071033 1071884 . + 2 MAGPIE_ID "dm_024_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1071908 1071913 . + 1 MAGPIE_ID "dm_024_GS_dna_9"
Adh MAGPIE exon 1072985 1073182 0.126 - 1 MAGPIE_ID "dm_024_GS_dna_10" #dm_024_GS_10.04
Adh calypso tandemrepeat 1073168 1073182 . + 1 MAGPIE_CTG "dm_024" # 5 x CTT
Adh MAGPIE exon 1076146 1076281 0.041 - 1 MAGPIE_ID "dm_024_GS_dna_10" #dm_024_GS_10.03
Adh MAGPIE exon 1076902 1077102 0.717 - 2 MAGPIE_ID "dm_024_GS_dna_10" #dm_024_GS_10.02
Adh MAGPIE exon 1078465 1079099 0.945 - 0 MAGPIE_ID "dm_024_GS_dna_10" #dm_024_GS_10.01
Adh MAGPIE gene 1072985 1079099 . + 1 MAGPIE_ID "dm_024_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1079614 1079641 . + 0 MAGPIE_CTG "dm_024" # 7 x ATGA
Adh MAGPIE exon 1080191 1080391 0.008 + 1 MAGPIE_ID "dm_024_GS_dna_11" #dm_024_GS_11.01
Adh MAGPIE exon 1080191 1080550 0.982 + 1 MAGPIE_ID "dm_025_GS_dna_1" #dm_025_GS_1.01
Adh MAGPIE gene 1080191 1080550 . + 1 MAGPIE_ID "dm_025_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1080562 1080567 . + 0 MAGPIE_ID "dm_025_GS_dna_1"
Adh MAGPIE promotor 1080726 1080765 . + 2 MAGPIE_ID "dm_025_GS_dna_2"
Adh MAGPIE exon 1080824 1081111 0.010 + 1 MAGPIE_ID "dm_024_GS_dna_11" #dm_024_GS_11.02
Adh MAGPIE exon 1080893 1081134 0.345 + 1 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.01
Adh MAGPIE exon 1081774 1081920 0.301 + 0 MAGPIE_ID "dm_024_GS_dna_11" #dm_024_GS_11.03
Adh MAGPIE gene 1080191 1081920 . + 1 MAGPIE_ID "dm_024_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1083400 1083793 0.660 - 1 MAGPIE_ID "dm_024_GS_dna_12" #dm_024_GS_12.02
Adh MAGPIE exon 1083628 1083965 0.008 + 0 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.02
Adh MAGPIE exon 1084268 1084890 0.698 - 2 MAGPIE_ID "dm_024_GS_dna_12" #dm_024_GS_12.01
Adh MAGPIE gene 1083400 1084890 . + 0 MAGPIE_ID "dm_024_GS_dna_12" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1084758 1084913 0.010 + 2 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.03
Adh MAGPIE exon 1085487 1085647 0.009 + 2 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.04
Adh calypso tandemrepeat 1086467 1086481 . + 1 MAGPIE_CTG "dm_025" # 5 x CAG
Adh MAGPIE exon 1088648 1088855 0.587 + 1 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.05
Adh calypso tandemrepeat 1088991 1089005 . + 2 MAGPIE_CTG "dm_025" # 5 x TCC
Adh MAGPIE exon 1089066 1089373 0.401 + 2 MAGPIE_ID "dm_025_GS_dna_2" #dm_025_GS_2.06
Adh MAGPIE gene 1080893 1089373 . + 1 MAGPIE_ID "dm_025_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1089447 1089452 . + 2 MAGPIE_ID "dm_025_GS_dna_2"
Adh MAGPIE polyA_signal 1089492 1089497 . - 0 MAGPIE_ID "dm_025_MP_dna_3"
Adh calypso tandemrepeat 1089936 1089956 . + 2 MAGPIE_CTG "dm_025" # 7 x CTG
Adh reputer repeat 1092588 1092668 . + . REPEAT "35" # maximal forward repeat
Adh reputer repeat 1092589 1092669 . + . REPEAT "29" # maximal forward repeat
Adh reputer repeat 1092593 1092671 . + . REPEAT "137" # maximal palindromic repeat
Adh reputer repeat 1093125 1093203 . - . REPEAT "137" # maximal palindromic repeat
Adh reputer repeat 1093127 1093203 . + . REPEAT "135" # maximal palindromic repeat
Adh reputer repeat 1093128 1093203 . - . REPEAT "138" # maximal palindromic repeat
Adh reputer repeat 1093404 1093483 . + . REPEAT "30" # maximal forward repeat
Adh reputer repeat 1093404 1093484 . + . REPEAT "29" # maximal forward repeat
Adh reputer repeat 1093408 1093484 . - . REPEAT "135" # maximal palindromic repeat
Adh calypso tandemrepeat 1094143 1094157 . + 0 MAGPIE_CTG "dm_025" # 5 x CAT
Adh calypso tandemrepeat 1094519 1094533 . + 1 MAGPIE_CTG "dm_025" # 5 x TGT
Adh calypso tandemrepeat 1095234 1095248 . + 2 MAGPIE_CTG "dm_025" # 3 x GTTGT
Adh calypso tandemrepeat 1096242 1096257 . + 2 MAGPIE_CTG "dm_025" # 4 x TTTA
Adh calypso tandemrepeat 1099313 1099328 . + 1 MAGPIE_CTG "dm_025" # 4 x TGGC
Adh MAGPIE CDS 1104531 1104965 . - 0 MAGPIE_ID "dm_025_MP_dna_3"
Adh MAGPIE gene 1104531 1104965 1 - 0 MAGPIE_ID "dm_025_MP_dna_3" # DE open reading frame from fruit fly (145 aa);ST putative;TY single function;CC Exact match to Drosophila orf;
Adh MAGPIE start_codon 1104963 1104965 . - 0 MAGPIE_ID "dm_025_MP_dna_3"
Adh calypso tandemrepeat 1107046 1107063 . + 0 MAGPIE_CTG "dm_025" # 3 x GCCACC
Adh MAGPIE promotor 1107700 1107739 . - 1 MAGPIE_ID "dm_025_MP_dna_3"
Adh calypso tandemrepeat 1109743 1109766 . + 0 MAGPIE_CTG "dm_025" # 4 x ATACTA
Adh MAGPIE promotor 1109965 1110004 . + 0 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE start_codon 1110074 1110077 . + 1 MAGPIE_ID "dm_025_MP_dna_4a" #
Adh MAGPIE CDS 1110074 1110172 . + 1 MAGPIE_ID "dm_025_MP_dna_4a" #Alcohol dehydrogenase gene.
Adh MAGPIE CDS 1110238 1110642 . + 0 MAGPIE_ID "dm_025_MP_dna_4a" #Alcohol dehydrogenase gene.
Adh MAGPIE CDS 1110713 1110979 . + 1 MAGPIE_ID "dm_025_MP_dna_4a" #Alcohol dehydrogenase gene.
Adh MAGPIE gene 1110074 1110979 . + 1 MAGPIE_ID "dm_025_MP_dna_4a" #Alcohol dehydrogenase gene.
Adh MAGPIE stop_codon 1110973 1110979 . + 0 MAGPIE_ID "dm_025_MP_dna_4a" #
Adh calypso tandemrepeat 1110994 1111008 . + 0 MAGPIE_CTG "dm_025" # 15 x A
Adh MAGPIE start_codon 1111283 1111285 . + 1 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE CDS 1111283 1111378 . + 1 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE splice5 1111378 1111379 . + 0 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE splice3 1111804 1111805 . + 0 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE CDS 1111805 1112209 . + 1 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE splice5 1112209 1112210 . + 0 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE splice3 1112260 1112261 . + 0 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE CDS 1112261 1112578 . + 1 MAGPIE_ID "dm_025_MP_dna_4"
Adh MAGPIE gene 1111283 1112578 1 + 1 MAGPIE_ID "dm_025_MP_dna_4" # GN ADH-related;DE alcohol dehydrogenase related 81 kd protein - fruit fly;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 1112589 1112594 . + 2 MAGPIE_ID "dm_025_MP_dna_4"
Adh calypso tandemrepeat 1112646 1112683 . + 2 MAGPIE_CTG "dm_025" # 38 x T
Adh reputer repeat 1112660 1112764 . + . REPEAT "95" # maximal forward repeat
Adh reputer repeat 1112766 1112847 . + . REPEAT "26" # maximal forward repeat
Adh reputer repeat 1112846 1113005 . + . REPEAT "64" # maximal forward repeat
Adh MAGPIE promotor 1114115 1114154 . + 1 MAGPIE_ID "dm_025_GS_dna_5"
Adh MAGPIE exon 1115048 1115497 0.844 + 1 MAGPIE_ID "dm_025_GS_dna_5" #dm_025_GS_5.01
Adh MAGPIE gene 1115048 1115497 . + 1 MAGPIE_ID "dm_025_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1115540 1115545 . + 1 MAGPIE_ID "dm_025_GS_dna_5"
Adh MAGPIE polyA_signal 1116173 1116178 . - 1 MAGPIE_ID "dm_025_GS_dna_6"
Adh MAGPIE exon 1116327 1116774 0.902 - 2 MAGPIE_ID "dm_025_GS_dna_6" #dm_025_GS_6.03
Adh MAGPIE exon 1117455 1117672 0.879 - 1 MAGPIE_ID "dm_025_GS_dna_6" #dm_025_GS_6.02
Adh MAGPIE exon 1118649 1118732 0.927 - 0 MAGPIE_ID "dm_025_GS_dna_6" #dm_025_GS_6.01
Adh MAGPIE gene 1116327 1118732 3 + 2 MAGPIE_ID "dm_025_GS_dna_6" # DE super cysteine rich protein; SCRP (46 aa);ST putative;TY single function;CC Matches repetitive c-rich region; non-informative;
Adh MAGPIE promotor 1119428 1119467 . - 0 MAGPIE_ID "dm_025_GS_dna_6"
Adh MAGPIE promotor 1119952 1119991 . + 0 MAGPIE_ID "dm_025_GS_dna_7"
Adh calypso tandemrepeat 1120256 1120275 . + 1 MAGPIE_CTG "dm_025" # 5 x ATGG
Adh calypso tandemrepeat 1121325 1121348 . + 2 MAGPIE_CTG "dm_025" # 6 x GACA
Adh calypso tandemrepeat 1123531 1123545 . + 0 MAGPIE_CTG "dm_025" # 5 x TTA
Adh MAGPIE exon 1123828 1123896 0.883 + 0 MAGPIE_ID "dm_025_GS_dna_7" #dm_025_GS_7.01
Adh calypso tandemrepeat 1125075 1125095 . + 2 MAGPIE_CTG "dm_025" # 7 x GCA
Adh calypso tandemrepeat 1125075 1125095 . + 2 MAGPIE_CTG "dm_026" # 7 x GCA
Adh MAGPIE exon 1125007 1125165 0.974 + 0 MAGPIE_ID "dm_025_GS_dna_7" #dm_025_GS_7.02
Adh MAGPIE gene 1123828 1125165 . + 0 MAGPIE_ID "dm_025_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1125375 1125380 . + 2 MAGPIE_ID "dm_025_GS_dna_7"
Adh MAGPIE polyA_signal 1125491 1125496 . - 1 MAGPIE_ID "dm_025_GS_dna_8"
Adh MAGPIE exon 1125735 1125893 0.189 - 0 MAGPIE_ID "dm_025_GS_dna_8" #dm_025_GS_8.03
Adh MAGPIE exon 1126784 1126947 0.248 + 1 MAGPIE_ID "dm_026_GS_dna_1" #dm_026_GS_1.01
Adh MAGPIE exon 1128207 1128352 0.103 + 2 MAGPIE_ID "dm_026_GS_dna_1" #dm_026_GS_1.02
Adh MAGPIE gene 1126784 1128352 . - 1 MAGPIE_ID "dm_026_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1128374 1128379 . + 1 MAGPIE_ID "dm_026_GS_dna_1"
Adh MAGPIE polyA_signal 1128434 1128439 . - 1 MAGPIE_ID "dm_026_GS_dna_2"
Adh MAGPIE exon 1128664 1128863 0.285 - 0 MAGPIE_ID "dm_026_GS_dna_2" #dm_026_GS_2.02
Adh MAGPIE exon 1128724 1128863 0.530 - 0 MAGPIE_ID "dm_025_GS_dna_8" #dm_025_GS_8.02
Adh MAGPIE exon 1129074 1129236 0.632 - 2 MAGPIE_ID "dm_026_GS_dna_2" #dm_026_GS_2.01
Adh MAGPIE exon 1129074 1129236 0.660 - 2 MAGPIE_ID "dm_025_GS_dna_8" #dm_025_GS_8.01
Adh MAGPIE gene 1125735 1129236 . + 2 MAGPIE_ID "dm_025_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 1128664 1129236 . - 2 MAGPIE_ID "dm_026_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1129749 1129788 . - 2 MAGPIE_ID "dm_026_GS_dna_2"
Adh MAGPIE polyA_signal 1130117 1130122 . - 1 MAGPIE_ID "dm_026_GS_dna_3"
Adh MAGPIE exon 1130623 1130755 0.207 - 1 MAGPIE_ID "dm_026_GS_dna_3" #dm_026_GS_3.03
Adh calypso tandemrepeat 1131750 1131767 . + 2 MAGPIE_CTG "dm_026" # 3 x AGTTGC
Adh MAGPIE exon 1133479 1133643 0.432 - 2 MAGPIE_ID "dm_026_GS_dna_3" #dm_026_GS_3.02
Adh MAGPIE exon 1135298 1135446 0.664 - 2 MAGPIE_ID "dm_026_GS_dna_3" #dm_026_GS_3.01
Adh MAGPIE gene 1130623 1135446 . - 2 MAGPIE_ID "dm_026_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1135457 1135472 . + 1 MAGPIE_CTG "dm_026" # 8 x AT
Adh MAGPIE promotor 1136412 1136451 . - 2 MAGPIE_ID "dm_026_GS_dna_3"
Adh reputer repeat 1136378 1136493 . + . REPEAT "12" # maximal forward repeat
Adh reputer repeat 1136408 1136493 . + . REPEAT "3" # maximal forward repeat
Adh reputer repeat 1136362 1136789 . + . REPEAT "79" # maximal forward repeat
Adh reputer repeat 1136495 1136789 . + . REPEAT "56" # maximal forward repeat
Adh reputer repeat 1136495 1136809 . + . REPEAT "54" # maximal forward repeat
Adh MAGPIE polyA_signal 1136862 1136867 . - 0 MAGPIE_ID "dm_026_MP_dna_4"
Adh reputer repeat 1136808 1136983 . + . REPEAT "5" # maximal forward repeat
Adh reputer repeat 1136985 1137039 . + . REPEAT "8" # maximal forward repeat
Adh reputer repeat 1137050 1137369 . + . REPEAT "61" # maximal forward repeat
Adh reputer repeat 1137374 1137613 . + . REPEAT "32" # maximal forward repeat
Adh reputer repeat 1137615 1138028 . + . REPEAT "87" # maximal forward repeat
Adh reputer repeat 1138030 1138502 . + . REPEAT "42" # maximal forward repeat
Adh reputer repeat 1138504 1139186 . + . REPEAT "24" # maximal forward repeat
Adh reputer repeat 1139188 1139387 . + . REPEAT "27" # maximal forward repeat
Adh reputer repeat 1139395 1139519 . + . REPEAT "1" # maximal forward repeat
Adh reputer repeat 1139521 1143645 . + . REPEAT "75" # maximal forward repeat
Adh MAGPIE CDS 1141566 1143953 . - 0 MAGPIE_ID "dm_026_MP_dna_4"
Adh MAGPIE gene 1141566 1143953 1 - 0 MAGPIE_ID "dm_026_MP_dna_4" # DE E239.9-1 cDNA, unknown protein (796 aa);ST putative;TY single function;CC Identical to dm_008_GS_dna_14;
Adh reputer repeat 1143647 1144484 . + . REPEAT "45" # maximal forward repeat
Adh calypso tandemrepeat 1144469 1144487 . + 1 MAGPIE_CTG "dm_026" # 19 x T
Adh reputer repeat 1144563 1144626 . + . REPEAT "77" # maximal forward repeat
Adh reputer repeat 1144563 1144626 . + . REPEAT "78" # maximal forward repeat
Adh reputer repeat 1144662 1144725 . + . REPEAT "76" # maximal forward repeat
Adh reputer repeat 1144662 1144725 . + . REPEAT "78" # maximal forward repeat
Adh reputer repeat 1144472 1144880 . + . REPEAT "94" # maximal forward repeat
Adh MAGPIE promotor 1144853 1144892 . - 0 MAGPIE_ID "dm_026_MP_dna_4"
Adh reputer repeat 1144882 1145083 . + . REPEAT "89" # maximal forward repeat
Adh MAGPIE polyA_signal 1145093 1145098 . - 1 MAGPIE_ID "dm_026_GS_dna_5"
Adh reputer repeat 1145055 1145170 . + . REPEAT "12" # maximal forward repeat
Adh reputer repeat 1145085 1145170 . + . REPEAT "3" # maximal forward repeat
Adh reputer repeat 1145039 1145466 . + . REPEAT "79" # maximal forward repeat
Adh reputer repeat 1145172 1145466 . + . REPEAT "53" # maximal forward repeat
Adh reputer repeat 1145172 1145466 . + . REPEAT "55" # maximal forward repeat
Adh calypso tandemrepeat 1145749 1145763 . + 0 MAGPIE_CTG "dm_026" # 3 x CCGAT
Adh MAGPIE exon 1145593 1145844 0.227 - 2 MAGPIE_ID "dm_026_GS_dna_5" #dm_026_GS_5.01
Adh MAGPIE gene 1145593 1145844 . - 2 MAGPIE_ID "dm_026_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1146203 1146242 . - 0 MAGPIE_ID "dm_026_GS_dna_5"
Adh MAGPIE polyA_signal 1146252 1146257 . - 0 MAGPIE_ID "dm_026_GS_dna_6"
Adh calypso tandemrepeat 1146320 1146335 . + 1 MAGPIE_CTG "dm_026" # 16 x A
Adh MAGPIE exon 1146799 1147106 0.954 - 0 MAGPIE_ID "dm_026_GS_dna_6" #dm_026_GS_6.04
Adh calypso tandemrepeat 1147126 1147143 . + 0 MAGPIE_CTG "dm_026" # 3 x TTATTT
Adh MAGPIE exon 1147866 1148064 0.714 - 2 MAGPIE_ID "dm_026_GS_dna_6" #dm_026_GS_6.03
Adh MAGPIE exon 1148478 1148530 0.712 - 1 MAGPIE_ID "dm_026_GS_dna_6" #dm_026_GS_6.02
Adh MAGPIE exon 1148830 1149064 0.682 - 1 MAGPIE_ID "dm_026_GS_dna_6" #dm_026_GS_6.01
Adh MAGPIE gene 1146799 1149064 . - 1 MAGPIE_ID "dm_026_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1149670 1149709 . - 1 MAGPIE_ID "dm_026_GS_dna_6"
Adh calypso tandemrepeat 1151879 1151897 . + 1 MAGPIE_CTG "dm_026" # 19 x A
Adh calypso tandemrepeat 1152128 1152145 . + 1 MAGPIE_CTG "dm_026" # 3 x ATGCTG
Adh MAGPIE promotor 1152452 1152491 . + 1 MAGPIE_ID "dm_026_GS_dna_7"
Adh calypso tandemrepeat 1155339 1155357 . + 2 MAGPIE_CTG "dm_026" # 19 x A
Adh calypso tandemrepeat 1155686 1155703 . + 1 MAGPIE_CTG "dm_026" # 6 x GAT
Adh MAGPIE exon 1155909 1156244 0.966 + 2 MAGPIE_ID "dm_026_GS_dna_7" #dm_026_GS_7.01
Adh MAGPIE gene 1155909 1156244 . - 0 MAGPIE_ID "dm_026_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1156281 1156286 . + 2 MAGPIE_ID "dm_026_GS_dna_7"
Adh MAGPIE promotor 1156627 1156666 . + 0 MAGPIE_ID "dm_026_GS_dna_8"
Adh calypso tandemrepeat 1157057 1157074 . + 1 MAGPIE_CTG "dm_026" # 3 x GCAATT
Adh MAGPIE exon 1157124 1157396 0.391 + 2 MAGPIE_ID "dm_026_GS_dna_8" #dm_026_GS_8.01
Adh MAGPIE gene 1157124 1157396 . - 0 MAGPIE_ID "dm_026_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1157935 1157940 . + 0 MAGPIE_ID "dm_026_GS_dna_8"
Adh MAGPIE polyA_signal 1158058 1158063 . - 2 MAGPIE_ID "dm_026_GS_dna_9"
Adh MAGPIE exon 1159253 1159449 0.929 - 2 MAGPIE_ID "dm_026_GS_dna_9" #dm_026_GS_9.05
Adh MAGPIE exon 1159530 1159749 0.019 - 2 MAGPIE_ID "dm_026_GS_dna_9" #dm_026_GS_9.04
Adh calypso tandemrepeat 1160948 1160964 . + 1 MAGPIE_CTG "dm_026" # 17 x T
Adh calypso tandemrepeat 1161184 1161198 . + 0 MAGPIE_CTG "dm_026" # 5 x TTG
Adh calypso tandemrepeat 1162208 1162222 . + 1 MAGPIE_CTG "dm_026" # 15 x A
Adh MAGPIE exon 1163535 1163787 0.535 - 2 MAGPIE_ID "dm_026_GS_dna_9" #dm_026_GS_9.03
Adh calypso tandemrepeat 1168371 1168390 . + 2 MAGPIE_CTG "dm_026" # 10 x AC
Adh MAGPIE exon 1169369 1169435 0.356 - 0 MAGPIE_ID "dm_026_GS_dna_9" #dm_026_GS_9.02
Adh MAGPIE exon 1171159 1171226 0.592 - 0 MAGPIE_ID "dm_026_GS_dna_9" #dm_026_GS_9.01
Adh MAGPIE gene 1159253 1171226 . - 0 MAGPIE_ID "dm_026_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1171176 1171265 0.290 + 2 MAGPIE_ID "dm_027_GS_dna_1" #dm_027_GS_1.01
Adh calypso tandemrepeat 1172531 1172568 . + 1 MAGPIE_CTG "dm_026" # 19 x TA
Adh calypso tandemrepeat 1172531 1172568 . + 1 MAGPIE_CTG "dm_027" # 19 x TA
Adh MAGPIE exon 1173445 1173675 0.181 + 0 MAGPIE_ID "dm_027_GS_dna_1" #dm_027_GS_1.02
Adh MAGPIE gene 1171176 1173675 . - 2 MAGPIE_ID "dm_027_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1173784 1173789 . + 0 MAGPIE_ID "dm_027_GS_dna_1"
Adh MAGPIE polyA_signal 1174265 1174270 . - 1 MAGPIE_ID "dm_027_GS_dna_2"
Adh MAGPIE exon 1175859 1176133 0.639 - 1 MAGPIE_ID "dm_027_GS_dna_2" #dm_027_GS_2.03
Adh calypso tandemrepeat 1176269 1176286 . + 1 MAGPIE_CTG "dm_027" # 18 x A
Adh calypso tandemrepeat 1178536 1178560 . + 0 MAGPIE_CTG "dm_027" # 25 x T
Adh MAGPIE exon 1178371 1178593 0.949 - 1 MAGPIE_ID "dm_027_GS_dna_2" #dm_027_GS_2.02
Adh MAGPIE exon 1182203 1182415 0.917 - 1 MAGPIE_ID "dm_027_GS_dna_2" #dm_027_GS_2.01
Adh MAGPIE gene 1175859 1182415 . - 1 MAGPIE_ID "dm_027_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1183177 1183216 . - 1 MAGPIE_ID "dm_027_GS_dna_2"
Adh MAGPIE promotor 1184688 1184727 . + 2 MAGPIE_ID "dm_027_GS_dna_3"
Adh MAGPIE exon 1185006 1185086 0.927 + 2 MAGPIE_ID "dm_027_GS_dna_3" #dm_027_GS_3.01
Adh MAGPIE exon 1187398 1187646 0.803 + 0 MAGPIE_ID "dm_027_GS_dna_3" #dm_027_GS_3.02
Adh MAGPIE gene 1185006 1187646 . - 2 MAGPIE_ID "dm_027_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1187937 1187942 . + 2 MAGPIE_ID "dm_027_GS_dna_3"
Adh MAGPIE polyA_signal 1187980 1187985 . - 2 MAGPIE_ID "dm_027_GS_dna_4"
Adh calypso tandemrepeat 1190348 1190365 . + 1 MAGPIE_CTG "dm_027" # 3 x TGTTGC
Adh MAGPIE exon 1191961 1192146 0.737 - 2 MAGPIE_ID "dm_027_GS_dna_4" #dm_027_GS_4.03
Adh calypso tandemrepeat 1195025 1195039 . + 1 MAGPIE_CTG "dm_027" # 15 x T
Adh MAGPIE exon 1195612 1195710 0.970 - 2 MAGPIE_ID "dm_027_GS_dna_4" #dm_027_GS_4.02
Adh MAGPIE exon 1196126 1196173 0.874 - 1 MAGPIE_ID "dm_027_GS_dna_4" #dm_027_GS_4.01
Adh MAGPIE gene 1191961 1196173 . - 1 MAGPIE_ID "dm_027_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1196579 1196596 . + 1 MAGPIE_CTG "dm_027" # 3 x GCAACA
Adh MAGPIE promotor 1197253 1197292 . - 1 MAGPIE_ID "dm_027_GS_dna_4"
Adh MAGPIE promotor 1198705 1198744 . + 0 MAGPIE_ID "dm_027_GS_dna_5"
Adh MAGPIE exon 1198757 1198941 0.640 + 1 MAGPIE_ID "dm_027_GS_dna_5" #dm_027_GS_5.01
Adh MAGPIE exon 1202772 1202931 0.623 + 2 MAGPIE_ID "dm_027_GS_dna_5" #dm_027_GS_5.02
Adh MAGPIE gene 1198757 1202931 . - 2 MAGPIE_ID "dm_027_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1203684 1203689 . + 2 MAGPIE_ID "dm_027_GS_dna_5"
Adh MAGPIE promotor 1204108 1204147 . + 0 MAGPIE_ID "dm_027_GS_dna_6"
Adh MAGPIE exon 1205439 1205597 0.964 + 2 MAGPIE_ID "dm_027_GS_dna_6" #dm_027_GS_6.01
Adh calypso tandemrepeat 1206749 1206766 . + 1 MAGPIE_CTG "dm_027" # 6 x AGC
Adh MAGPIE exon 1206559 1206786 0.989 + 0 MAGPIE_ID "dm_027_GS_dna_6" #dm_027_GS_6.02
Adh MAGPIE gene 1205439 1206786 . - 2 MAGPIE_ID "dm_027_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1206820 1206825 . + 0 MAGPIE_ID "dm_027_GS_dna_6"
Adh calypso tandemrepeat 1207025 1207039 . + 1 MAGPIE_CTG "dm_027" # 3 x ATTAA
Adh MAGPIE promotor 1207161 1207200 . + 2 MAGPIE_ID "dm_027_GS_dna_7"
Adh MAGPIE exon 1207563 1207574 0.945 + 2 MAGPIE_ID "dm_027_GS_dna_7" #dm_027_GS_7.01
Adh MAGPIE exon 1207666 1207906 0.731 + 0 MAGPIE_ID "dm_027_GS_dna_7" #dm_027_GS_7.02
Adh MAGPIE exon 1209000 1209064 0.540 + 2 MAGPIE_ID "dm_027_GS_dna_7" #dm_027_GS_7.03
Adh MAGPIE exon 1211030 1211110 0.627 + 1 MAGPIE_ID "dm_027_GS_dna_7" #dm_027_GS_7.04
Adh MAGPIE exon 1213212 1213325 0.591 + 2 MAGPIE_ID "dm_027_GS_dna_7" #dm_027_GS_7.05
Adh MAGPIE gene 1207563 1213325 . - 0 MAGPIE_ID "dm_027_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1213336 1213341 . + 0 MAGPIE_ID "dm_027_GS_dna_7"
Adh MAGPIE polyA_signal 1213613 1213618 . - 1 MAGPIE_ID "dm_027_GS_dna_8"
Adh MAGPIE polyA_signal 1215081 1215086 . - 0 MAGPIE_ID "dm_028_GS_dna_1"
Adh MAGPIE exon 1216389 1216489 0.394 - 1 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.07
Adh MAGPIE exon 1218391 1219920 0.416 - 2 MAGPIE_ID "dm_027_GS_dna_8" #dm_027_GS_8.01
Adh MAGPIE gene 1218391 1219920 . - 2 MAGPIE_ID "dm_027_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1218654 1220253 0.387 - 2 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.06
Adh MAGPIE exon 1220453 1221762 0.903 - 2 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.05
Adh MAGPIE exon 1222288 1222395 0.485 - 2 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.04
Adh MAGPIE exon 1222483 1223742 0.220 - 2 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.03
Adh MAGPIE exon 1225056 1225291 0.276 - 1 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.02
Adh MAGPIE exon 1225603 1225742 0.558 - 0 MAGPIE_ID "dm_028_GS_dna_1" #dm_028_GS_1.01
Adh MAGPIE gene 1216389 1225742 . + 2 MAGPIE_ID "dm_028_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1226741 1226780 . - 0 MAGPIE_ID "dm_028_GS_dna_1"
Adh calypso tandemrepeat 1227377 1227391 . + 1 MAGPIE_CTG "dm_028" # 15 x A
Adh MAGPIE promotor 1227425 1227464 . + 1 MAGPIE_ID "dm_028_GS_dna_2"
Adh MAGPIE exon 1229684 1230733 0.993 + 1 MAGPIE_ID "dm_028_GS_dna_2" #dm_028_GS_2.01
Adh MAGPIE gene 1229684 1230733 3 + 1 MAGPIE_ID "dm_028_GS_dna_2" # DE spectrin (1127 aa);ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE polyA_signal 1230972 1230977 . + 2 MAGPIE_ID "dm_028_GS_dna_2"
Adh MAGPIE polyA_signal 1231001 1231006 . - 1 MAGPIE_ID "dm_028_GS_dna_3"
Adh calypso tandemrepeat 1231197 1231211 . + 2 MAGPIE_CTG "dm_028" # 5 x TGC
Adh reputer repeat 1231176 1231228 . + . REPEAT "7" # maximal forward repeat
Adh calypso tandemrepeat 1231296 1231310 . + 2 MAGPIE_CTG "dm_028" # 5 x TGC
Adh reputer repeat 1231275 1231327 . + . REPEAT "7" # maximal forward repeat
Adh MAGPIE exon 1231127 1231384 0.885 - 1 MAGPIE_ID "dm_028_GS_dna_3" #dm_028_GS_3.02
Adh MAGPIE exon 1231452 1231463 0.999 - 0 MAGPIE_ID "dm_028_GS_dna_3" #dm_028_GS_3.01
Adh MAGPIE gene 1231127 1231463 . + 1 MAGPIE_ID "dm_028_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1231495 1231534 . - 1 MAGPIE_ID "dm_028_GS_dna_3"
Adh MAGPIE promotor 1232131 1232170 . + 0 MAGPIE_ID "dm_028_GS_dna_4"
Adh MAGPIE exon 1233087 1233293 0.831 + 2 MAGPIE_ID "dm_028_GS_dna_4" #dm_028_GS_4.01
Adh MAGPIE gene 1233087 1233293 3 + 2 MAGPIE_ID "dm_028_GS_dna_4" # DE cornifin A (SMALL PROL (144 aa);ST putative;TY single function;CC Matches highly repetitive region;
Adh calypso tandemrepeat 1233493 1233507 . + 0 MAGPIE_CTG "dm_028" # 3 x TATTA
Adh MAGPIE polyA_signal 1233916 1233921 . + 0 MAGPIE_ID "dm_028_GS_dna_4"
Adh MAGPIE promotor 1234046 1234085 . + 1 MAGPIE_ID "dm_028_GS_dna_5"
Adh MAGPIE exon 1234598 1234752 0.969 + 1 MAGPIE_ID "dm_028_GS_dna_5" #dm_028_GS_5.01
Adh MAGPIE exon 1235638 1235782 0.972 + 0 MAGPIE_ID "dm_028_GS_dna_5" #dm_028_GS_5.02
Adh MAGPIE gene 1234598 1235782 . + 1 MAGPIE_ID "dm_028_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1235903 1235908 . + 1 MAGPIE_ID "dm_028_GS_dna_5"
Adh MAGPIE polyA_signal 1235971 1235976 . - 2 MAGPIE_ID "dm_028_GS_dna_6"
Adh MAGPIE exon 1237615 1237935 0.792 - 2 MAGPIE_ID "dm_028_GS_dna_6" #dm_028_GS_6.01
Adh MAGPIE gene 1237615 1237935 . + 0 MAGPIE_ID "dm_028_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1237958 1237977 . + 1 MAGPIE_CTG "dm_028" # 10 x TG
Adh MAGPIE promotor 1238216 1238255 . - 0 MAGPIE_ID "dm_028_GS_dna_6"
Adh MAGPIE promotor 1241002 1241041 . + 0 MAGPIE_ID "dm_028_GS_dna_7"
Adh MAGPIE exon 1242560 1242628 0.334 + 1 MAGPIE_ID "dm_028_GS_dna_7" #dm_028_GS_7.01
Adh MAGPIE exon 1243647 1243787 0.027 + 2 MAGPIE_ID "dm_028_GS_dna_7" #dm_028_GS_7.02
Adh MAGPIE exon 1245175 1245291 0.054 + 0 MAGPIE_ID "dm_028_GS_dna_7" #dm_028_GS_7.03
Adh MAGPIE exon 1247640 1247834 0.789 + 2 MAGPIE_ID "dm_028_GS_dna_7" #dm_028_GS_7.04
Adh MAGPIE exon 1250753 1251421 0.758 + 1 MAGPIE_ID "dm_028_GS_dna_7" #dm_028_GS_7.05
Adh MAGPIE gene 1242560 1251421 1 + 1 MAGPIE_ID "dm_028_GS_dna_7" # DE GH20441.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 1252351 1252356 . + 0 MAGPIE_ID "dm_028_GS_dna_7"
Adh MAGPIE promotor 1252382 1252421 . + 1 MAGPIE_ID "dm_028_GS_dna_8"
Adh MAGPIE exon 1252544 1253617 0.645 + 1 MAGPIE_ID "dm_028_GS_dna_8" #dm_028_GS_8.01
Adh MAGPIE gene 1252544 1253617 1 + 1 MAGPIE_ID "dm_028_GS_dna_8" # DE COP9 co (525 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 1253705 1253710 . + 1 MAGPIE_ID "dm_028_GS_dna_8"
Adh MAGPIE promotor 1254467 1254506 . + 1 MAGPIE_ID "dm_028_GS_dna_9"
Adh calypso tandemrepeat 1254492 1254506 . + 2 MAGPIE_CTG "dm_028" # 3 x ATTCA
Adh blastx anomoly 1256055 1256420 . - 0 MAGPIE_CTG "dm_028" #120/189 aa match with P.horikoshii hypothetical protein, with internal stops, overlaps with gene on opposite strand
Adh MAGPIE exon 1255669 1256823 0.999 + 0 MAGPIE_ID "dm_028_GS_dna_9" #dm_028_GS_9.01
Adh MAGPIE gene 1255669 1256823 1 + 0 MAGPIE_ID "dm_028_GS_dna_9" # DE peroxisome biosynthesis (1030 aa);ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE polyA_signal 1256861 1256866 . + 1 MAGPIE_ID "dm_028_GS_dna_9"
Adh MAGPIE exon 1260165 1260262 0.676 - 1 MAGPIE_ID "dm_028_GS_dna_10" #dm_028_GS_10.02
Adh MAGPIE exon 1260699 1260735 0.384 + 2 MAGPIE_ID "dm_029_GS_dna_1" #dm_029_GS_1.01
Adh MAGPIE exon 1262187 1262229 0.802 - 2 MAGPIE_ID "dm_028_GS_dna_10" #dm_028_GS_10.01
Adh MAGPIE gene 1260165 1262229 . + 2 MAGPIE_ID "dm_028_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1262204 1262244 0.263 + 1 MAGPIE_ID "dm_029_GS_dna_1" #dm_029_GS_1.02
Adh MAGPIE gene 1260699 1262244 . - 2 MAGPIE_ID "dm_029_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1262741 1262746 . + 1 MAGPIE_ID "dm_029_GS_dna_1"
Adh MAGPIE polyA_signal 1262993 1262998 . - 1 MAGPIE_ID "dm_029_GS_dna_2"
Adh MAGPIE exon 1263535 1264034 0.999 - 0 MAGPIE_ID "dm_028_GS_dna_11" #dm_028_GS_11.03
Adh MAGPIE exon 1263535 1264034 0.999 - 0 MAGPIE_ID "dm_029_GS_dna_2" #dm_029_GS_2.03
Adh MAGPIE exon 1264126 1264286 0.997 - 0 MAGPIE_ID "dm_028_GS_dna_11" #dm_028_GS_11.02
Adh MAGPIE exon 1264126 1264286 0.997 - 0 MAGPIE_ID "dm_029_GS_dna_2" #dm_029_GS_2.02
Adh MAGPIE exon 1264559 1264638 0.787 - 2 MAGPIE_ID "dm_028_GS_dna_11" #dm_028_GS_11.01
Adh MAGPIE exon 1264559 1264638 0.883 - 2 MAGPIE_ID "dm_029_GS_dna_2" #dm_029_GS_2.01
Adh MAGPIE gene 1263535 1264638 1 + 0 MAGPIE_ID "dm_028_GS_dna_11" # DE LP06655.5prime LP EST drosophila;ST putative;TY single function;CC Exact match to EST.;
Adh MAGPIE gene 1263535 1264638 3 - 2 MAGPIE_ID "dm_029_GS_dna_2" # DE protein C;ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE promotor 1269041 1269080 . - 0 MAGPIE_ID "dm_029_GS_dna_2"
Adh MAGPIE polyA_signal 1270273 1270278 . - 2 MAGPIE_ID "dm_029_GS_dna_3"
Adh MAGPIE exon 1271377 1272140 0.931 - 0 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.06
Adh MAGPIE exon 1272217 1272395 0.999 - 0 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.05
Adh MAGPIE exon 1273203 1273596 0.000 - 2 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.04
Adh MAGPIE exon 1273652 1273822 0.530 - 1 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.03
Adh MAGPIE exon 1274014 1274154 0.230 - 2 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.02
Adh MAGPIE exon 1276206 1276359 0.939 - 2 MAGPIE_ID "dm_029_GS_dna_3" #dm_029_GS_3.01
Adh MAGPIE gene 1271377 1276359 3 - 2 MAGPIE_ID "dm_029_GS_dna_3" # DE coagulation factor Xa (EC 3.4.21. (482 aa);ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE promotor 1276739 1276778 . - 0 MAGPIE_ID "dm_029_GS_dna_3"
Adh MAGPIE promotor 1277878 1277917 . + 0 MAGPIE_ID "dm_029_GS_dna_4"
Adh MAGPIE exon 1278087 1278236 0.608 + 2 MAGPIE_ID "dm_029_GS_dna_4" #dm_029_GS_4.01
Adh calypso tandemrepeat 1278334 1278349 . + 0 MAGPIE_CTG "dm_029" # 4 x TATG
Adh MAGPIE exon 1278370 1278783 0.593 + 0 MAGPIE_ID "dm_029_GS_dna_4" #dm_029_GS_4.02
Adh MAGPIE gene 1278087 1278783 . - 2 MAGPIE_ID "dm_029_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1278937 1278942 . + 0 MAGPIE_ID "dm_029_GS_dna_4"
Adh MAGPIE promotor 1279207 1279246 . + 0 MAGPIE_ID "dm_029_GS_dna_5"
Adh MAGPIE exon 1279740 1279866 0.596 + 2 MAGPIE_ID "dm_029_GS_dna_5" #dm_029_GS_5.01
Adh MAGPIE exon 1280376 1280551 0.701 + 2 MAGPIE_ID "dm_029_GS_dna_5" #dm_029_GS_5.02
Adh MAGPIE gene 1279740 1280551 . - 1 MAGPIE_ID "dm_029_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1281009 1281014 . + 2 MAGPIE_ID "dm_029_GS_dna_5"
Adh MAGPIE polyA_signal 1281104 1281109 . - 1 MAGPIE_ID "dm_029_GS_dna_6"
Adh calypso tandemrepeat 1284489 1284503 . + 2 MAGPIE_CTG "dm_029" # 15 x T
Adh MAGPIE exon 1285030 1285502 0.945 - 0 MAGPIE_ID "dm_029_GS_dna_6" #dm_029_GS_6.04
Adh MAGPIE exon 1285595 1285746 0.966 - 2 MAGPIE_ID "dm_029_GS_dna_6" #dm_029_GS_6.03
Adh MAGPIE exon 1285814 1285859 0.916 - 0 MAGPIE_ID "dm_029_GS_dna_6" #dm_029_GS_6.02
Adh MAGPIE exon 1285971 1286199 0.864 - 2 MAGPIE_ID "dm_029_GS_dna_6" #dm_029_GS_6.01
Adh MAGPIE gene 1285030 1286199 2 - 2 MAGPIE_ID "dm_029_GS_dna_6" # DE acrosin , sperm - (374 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1286208 1286247 . - 2 MAGPIE_ID "dm_029_GS_dna_6"
Adh MAGPIE promotor 1286572 1286611 . + 0 MAGPIE_ID "dm_029_GS_dna_7"
Adh MAGPIE exon 1287362 1287449 0.934 + 1 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.01
Adh MAGPIE exon 1288777 1288839 0.456 + 0 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.02
Adh MAGPIE exon 1289437 1289622 0.697 + 0 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.03
Adh MAGPIE exon 1290737 1290891 0.521 + 1 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.04
Adh calypso tandemrepeat 1291267 1291284 . + 0 MAGPIE_CTG "dm_029" # 3 x CGAGGA
Adh MAGPIE exon 1291163 1291306 0.322 + 1 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.05
Adh MAGPIE exon 1291426 1291581 0.326 + 0 MAGPIE_ID "dm_029_GS_dna_7" #dm_029_GS_7.06
Adh MAGPIE gene 1287362 1291581 . - 2 MAGPIE_ID "dm_029_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1291777 1291782 . + 0 MAGPIE_ID "dm_029_GS_dna_7"
Adh MAGPIE promotor 1291835 1291874 . + 1 MAGPIE_ID "dm_029_GS_dna_8"
Adh MAGPIE exon 1292100 1292645 0.982 + 2 MAGPIE_ID "dm_029_GS_dna_8" #dm_029_GS_8.01
Adh MAGPIE gene 1292100 1292645 . - 0 MAGPIE_ID "dm_029_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1292803 1292808 . + 0 MAGPIE_ID "dm_029_GS_dna_8"
Adh MAGPIE polyA_signal 1292860 1292865 . - 2 MAGPIE_ID "dm_029_MP_dna_9"
Adh calypso tandemrepeat 1293629 1293644 . + 1 MAGPIE_CTG "dm_029" # 4 x AATA
Adh reputer repeat 1293596 1293729 . + . REPEAT "121" # maximal palindromic repeat
Adh reputer repeat 1293597 1293729 . + . REPEAT "140" # maximal palindromic repeat
Adh reputer repeat 1293596 1293872 . + . REPEAT "40" # maximal forward repeat
Adh reputer repeat 1293774 1293872 . + . REPEAT "106" # maximal palindromic repeat
Adh blastx similarity 1294446 1294520 0.0 - 0 MAGPIE_CTG "dm_029" #>gi|4377464|emb|CAA26447| (X02600) unidentified open reading frame I
Adh reputer repeat 1293774 1294881 . + . REPEAT "105" # maximal palindromic repeat
Adh reputer repeat 1294919 1295338 . + . REPEAT "136" # maximal palindromic repeat
Adh reputer repeat 1295914 1295973 . + . REPEAT "11" # maximal forward repeat
Adh reputer repeat 1295914 1295973 . + . REPEAT "110" # maximal palindromic repeat
Adh reputer repeat 1295975 1296045 . + . REPEAT "134" # maximal palindromic repeat
Adh reputer repeat 1295975 1296045 . + . REPEAT "67" # maximal forward repeat
Adh reputer repeat 1296022 1296081 . + . REPEAT "109" # maximal palindromic repeat
Adh reputer repeat 1296022 1296081 . + . REPEAT "11" # maximal forward repeat
Adh reputer repeat 1296083 1296153 . + . REPEAT "133" # maximal palindromic repeat
Adh reputer repeat 1296083 1296153 . + . REPEAT "67" # maximal forward repeat
Adh reputer repeat 1295340 1296530 . + . REPEAT "120" # maximal palindromic repeat
Adh reputer repeat 1296532 1296587 . + . REPEAT "119" # maximal palindromic repeat
Adh reputer repeat 1296589 1296832 . + . REPEAT "139" # maximal palindromic repeat
Adh reputer repeat 1296834 1296935 . + . REPEAT "129" # maximal palindromic repeat
Adh reputer repeat 1296937 1297031 . + . REPEAT "108" # maximal palindromic repeat
Adh reputer repeat 1297033 1297146 . + . REPEAT "124" # maximal palindromic repeat
Adh reputer repeat 1297148 1297389 . + . REPEAT "104" # maximal palindromic repeat
Adh reputer repeat 1297391 1297641 . + . REPEAT "127" # maximal palindromic repeat
Adh MAGPIE CDS 1294081 1298310 . - 2 MAGPIE_ID "dm_029_MP_dna_9"
Adh MAGPIE gene 1294081 1298310 1 - 2 MAGPIE_ID "dm_029_MP_dna_9" # GN copia;DE copia transposon protein (1409 aa);ST putative;TY single function;CC Look at FlyBase entry. Almost identical to dm_058_GS_dna_6.;
Adh MAGPIE start_codon 1298308 1298310 . - 2 MAGPIE_ID "dm_029_MP_dna_9"
Adh reputer repeat 1297643 1298344 . + . REPEAT "142" # maximal palindromic repeat
Adh calypso tandemrepeat 1298498 1298513 . + 1 MAGPIE_CTG "dm_029" # 4 x AATA
Adh reputer repeat 1298355 1298598 . + . REPEAT "97" # maximal palindromic repeat
Adh reputer repeat 1298466 1298598 . + . REPEAT "141" # maximal palindromic repeat
Adh reputer repeat 1298465 1298741 . + . REPEAT "40" # maximal forward repeat
Adh reputer repeat 1298643 1298741 . + . REPEAT "107" # maximal palindromic repeat
Adh MAGPIE promotor 1300215 1300254 . - 2 MAGPIE_ID "dm_029_MP_dna_9"
Adh MAGPIE exon 1300469 1300474 0.991 + 1 MAGPIE_ID "dm_029_GS_dna_10" #dm_029_GS_10.01
Adh MAGPIE exon 1300535 1302030 0.801 + 1 MAGPIE_ID "dm_029_GS_dna_10" #dm_029_GS_10.02
Adh MAGPIE exon 1303048 1303240 0.568 + 0 MAGPIE_ID "dm_029_GS_dna_10" #dm_029_GS_10.03
Adh calypso tandemrepeat 1305659 1305674 . + 1 MAGPIE_CTG "dm_029" # 4 x TTCA
Adh calypso tandemrepeat 1305659 1305674 . + 1 MAGPIE_CTG "dm_030" # 4 x TTCA
Adh MAGPIE exon 1306976 1307120 0.319 + 1 MAGPIE_ID "dm_029_GS_dna_10" #dm_029_GS_10.04
Adh MAGPIE exon 1306976 1307130 0.520 + 1 MAGPIE_ID "dm_030_GS_dna_1" #dm_030_GS_1.01
Adh MAGPIE exon 1308562 1308884 0.158 + 0 MAGPIE_ID "dm_029_GS_dna_10" #dm_029_GS_10.05
Adh MAGPIE gene 1300469 1308884 . - 0 MAGPIE_ID "dm_029_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1311852 1311868 . + 2 MAGPIE_CTG "dm_030" # 17 x T
Adh MAGPIE exon 1312765 1312941 0.010 + 0 MAGPIE_ID "dm_030_GS_dna_1" #dm_030_GS_1.02
Adh calypso tandemrepeat 1313762 1313777 . + 1 MAGPIE_CTG "dm_030" # 8 x GT
Adh MAGPIE exon 1315829 1315922 0.211 + 1 MAGPIE_ID "dm_030_GS_dna_1" #dm_030_GS_1.03
Adh MAGPIE gene 1306976 1315922 . - 0 MAGPIE_ID "dm_030_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1315957 1315962 . + 0 MAGPIE_ID "dm_030_GS_dna_1"
Adh MAGPIE polyA_signal 1316113 1316118 . - 2 MAGPIE_ID "dm_030_GS_dna_2"
Adh MAGPIE exon 1316180 1316324 0.478 - 0 MAGPIE_ID "dm_030_GS_dna_2" #dm_030_GS_2.02
Adh calypso tandemrepeat 1316848 1316865 . + 0 MAGPIE_CTG "dm_030" # 9 x AG
Adh MAGPIE exon 1318236 1318363 0.900 - 1 MAGPIE_ID "dm_030_GS_dna_2" #dm_030_GS_2.01
Adh MAGPIE gene 1316180 1318363 . - 1 MAGPIE_ID "dm_030_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1323482 1323521 . - 0 MAGPIE_ID "dm_030_GS_dna_2"
Adh MAGPIE promotor 1323546 1323585 . + 2 MAGPIE_ID "dm_030_GS_dna_3"
Adh MAGPIE exon 1325325 1325476 0.354 + 2 MAGPIE_ID "dm_030_GS_dna_3" #dm_030_GS_3.01
Adh MAGPIE exon 1331811 1331941 0.386 + 2 MAGPIE_ID "dm_030_GS_dna_3" #dm_030_GS_3.02
Adh MAGPIE exon 1332021 1332113 0.930 + 2 MAGPIE_ID "dm_030_GS_dna_3" #dm_030_GS_3.03
Adh MAGPIE exon 1332196 1332764 0.996 + 0 MAGPIE_ID "dm_030_GS_dna_3" #dm_030_GS_3.04
Adh MAGPIE gene 1325325 1332764 . - 0 MAGPIE_ID "dm_030_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1332916 1332921 . + 0 MAGPIE_ID "dm_030_GS_dna_3"
Adh MAGPIE polyA_signal 1332957 1332962 . - 0 MAGPIE_ID "dm_030_GS_dna_4"
Adh MAGPIE exon 1333640 1333962 0.838 - 2 MAGPIE_ID "dm_030_GS_dna_4" #dm_030_GS_4.02
Adh MAGPIE exon 1334205 1334409 0.595 - 2 MAGPIE_ID "dm_030_GS_dna_4" #dm_030_GS_4.01
Adh MAGPIE gene 1333640 1334409 . - 2 MAGPIE_ID "dm_030_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1334431 1334470 . - 1 MAGPIE_ID "dm_030_GS_dna_4"
Adh MAGPIE polyA_signal 1334673 1334678 . - 0 MAGPIE_ID "dm_030_GS_dna_5"
Adh MAGPIE exon 1334780 1335024 0.803 - 2 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.07
Adh MAGPIE exon 1335080 1335356 0.814 - 0 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.06
Adh blastx similarity 1334906 1336123 1e-39 - 1 MAGPIE_CTG "dm_030" #>gi|1352531|sp|P48066|NTG3_HUMAN SODIUM- AND CHLORIDE-DEPENDENT GABA
Adh MAGPIE exon 1335416 1336157 0.991 - 0 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.05
Adh MAGPIE exon 1336453 1336680 0.690 - 2 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.04
Adh MAGPIE exon 1337668 1338007 0.692 - 1 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.03
Adh MAGPIE exon 1338337 1338640 0.998 - 1 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.02
Adh MAGPIE exon 1338702 1338785 0.999 - 0 MAGPIE_ID "dm_030_GS_dna_5" #dm_030_GS_5.01
Adh MAGPIE gene 1334780 1338785 1 - 0 MAGPIE_ID "dm_030_GS_dna_5" # DE glycine transporter glyt2 - rat (799 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1340589 1340628 . - 2 MAGPIE_ID "dm_030_GS_dna_5"
Adh MAGPIE polyA_signal 1340949 1340954 . - 0 MAGPIE_ID "dm_030_GS_dna_6"
Adh MAGPIE exon 1341273 1341405 0.053 - 2 MAGPIE_ID "dm_030_GS_dna_6" #dm_030_GS_6.05
Adh calypso tandemrepeat 1342013 1342030 . + 1 MAGPIE_CTG "dm_030" # 3 x TCTTGG
Adh MAGPIE exon 1343297 1343428 0.038 - 1 MAGPIE_ID "dm_030_GS_dna_6" #dm_030_GS_6.04
Adh MAGPIE exon 1345610 1345895 0.061 - 0 MAGPIE_ID "dm_030_GS_dna_6" #dm_030_GS_6.03
Adh calypso tandemrepeat 1348479 1348494 . + 2 MAGPIE_CTG "dm_030" # 16 x G
Adh MAGPIE exon 1348649 1348820 0.083 - 0 MAGPIE_ID "dm_030_GS_dna_6" #dm_030_GS_6.02
Adh MAGPIE exon 1351755 1351841 0.319 - 0 MAGPIE_ID "dm_030_GS_dna_6" #dm_030_GS_6.01
Adh MAGPIE gene 1341273 1351841 . - 0 MAGPIE_ID "dm_030_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1353453 1353513 0.691 + 2 MAGPIE_ID "dm_031_GS_dna_1" #dm_031_GS_1.01
Adh calypso tandemrepeat 1354064 1354078 . + 1 MAGPIE_CTG "dm_030" # 3 x TACTA
Adh calypso tandemrepeat 1354064 1354078 . + 1 MAGPIE_CTG "dm_031" # 3 x TACTA
Adh MAGPIE exon 1356244 1356389 0.541 + 0 MAGPIE_ID "dm_031_GS_dna_1" #dm_031_GS_1.02
Adh calypso tandemrepeat 1360180 1360197 . + 0 MAGPIE_CTG "dm_031" # 3 x CAGATA
Adh blastx similarity 1360651 1361430 9e-21 - 2 MAGPIE_CTG "dm_031" #>gi|2781421 (AF006955) rolling stone [Drosophila melanogaster]
Adh calypso tandemrepeat 1361643 1361657 . + 2 MAGPIE_CTG "dm_031" # 3 x TTATT
Adh MAGPIE exon 1361682 1361956 0.077 + 2 MAGPIE_ID "dm_031_GS_dna_1" #dm_031_GS_1.03
Adh MAGPIE exon 1363483 1363603 0.088 + 0 MAGPIE_ID "dm_031_GS_dna_1" #dm_031_GS_1.04
Adh MAGPIE gene 1353453 1363603 . - 1 MAGPIE_ID "dm_031_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1363705 1363710 . + 0 MAGPIE_ID "dm_031_GS_dna_1"
Adh MAGPIE promotor 1363850 1363889 . + 1 MAGPIE_ID "dm_031_GS_dna_2"
Adh calypso tandemrepeat 1364975 1364992 . + 1 MAGPIE_CTG "dm_031" # 3 x TGCTGT
Adh MAGPIE exon 1365367 1365566 0.868 + 0 MAGPIE_ID "dm_031_GS_dna_2" #dm_031_GS_2.01
Adh MAGPIE exon 1366196 1366289 0.987 + 1 MAGPIE_ID "dm_031_GS_dna_2" #dm_031_GS_2.02
Adh MAGPIE exon 1366469 1366636 0.973 + 1 MAGPIE_ID "dm_031_GS_dna_2" #dm_031_GS_2.03
Adh MAGPIE gene 1365367 1366636 . - 1 MAGPIE_ID "dm_031_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1366807 1366812 . + 0 MAGPIE_ID "dm_031_GS_dna_2"
Adh MAGPIE polyA_signal 1366842 1366847 . - 0 MAGPIE_ID "dm_031_MP_dna_3"
Adh calypso tandemrepeat 1367583 1367606 . + 2 MAGPIE_CTG "dm_031" # 24 x T
Adh reputer repeat 1368805 1368863 . + . REPEAT "49" # maximal forward repeat
Adh reputer repeat 1369017 1369066 . + . REPEAT "4" # maximal forward repeat
Adh reputer repeat 1369068 1369156 . + . REPEAT "37" # maximal forward repeat
Adh MAGPIE CDS 1368951 1369282 . - 1 MAGPIE_ID "dm_031_MP_dna_3"
Adh MAGPIE gene 1368951 1369282 1 - 1 MAGPIE_ID "dm_031_MP_dna_3" # GN Mst35Ba;DE male-specific-transcript-35ba (protamine) (110 aa);ST putative;TY single function;CC Look at FlyBase entry. First and perfect copy;
Adh MAGPIE start_codon 1369280 1369282 . - 1 MAGPIE_ID "dm_031_MP_dna_3"
Adh reputer repeat 1369174 1369447 . + . REPEAT "86" # maximal forward repeat
Adh reputer repeat 1369513 1369574 . + . REPEAT "38" # maximal forward repeat
Adh MAGPIE promotor 1370610 1370649 . - 2 MAGPIE_ID "dm_031_MP_dna_3"
Adh MAGPIE polyA_signal 1370684 1370689 . - 1 MAGPIE_ID "dm_031_MP_dna_4"
Adh reputer repeat 1370656 1370735 . + . REPEAT "28" # maximal forward repeat
Adh reputer repeat 1370747 1370832 . + . REPEAT "48" # maximal forward repeat
Adh reputer repeat 1370834 1370884 . + . REPEAT "10" # maximal forward repeat
Adh reputer repeat 1371247 1371447 . + . REPEAT "92" # maximal forward repeat
Adh reputer repeat 1371449 1371511 . + . REPEAT "91" # maximal forward repeat
Adh reputer repeat 1371874 1371932 . + . REPEAT "49" # maximal forward repeat
Adh reputer repeat 1372086 1372135 . + . REPEAT "4" # maximal forward repeat
Adh reputer repeat 1372137 1372225 . + . REPEAT "37" # maximal forward repeat
Adh MAGPIE CDS 1372020 1372351 . - 1 MAGPIE_ID "dm_031_MP_dna_4"
Adh MAGPIE gene 1372020 1372351 1 - 1 MAGPIE_ID "dm_031_MP_dna_4" # GN Mst35Ba;DE male-specific-transcript-35ba (protamine) (110 aa);ST putative;TY single function;CC Look at FlyBase entry. Second and imperfect copy;
Adh MAGPIE start_codon 1372349 1372351 . - 1 MAGPIE_ID "dm_031_MP_dna_4"
Adh reputer repeat 1372243 1372516 . + . REPEAT "86" # maximal forward repeat
Adh reputer repeat 1372582 1372643 . + . REPEAT "38" # maximal forward repeat
Adh reputer repeat 1372673 1372752 . + . REPEAT "28" # maximal forward repeat
Adh reputer repeat 1372764 1372849 . + . REPEAT "48" # maximal forward repeat
Adh reputer repeat 1372851 1372901 . + . REPEAT "10" # maximal forward repeat
Adh reputer repeat 1373344 1373544 . + . REPEAT "92" # maximal forward repeat
Adh reputer repeat 1373546 1373608 . + . REPEAT "91" # maximal forward repeat
Adh calypso tandemrepeat 1379673 1379696 . + 2 MAGPIE_CTG "dm_031" # 24 x T
Adh reputer repeat 1379673 1379777 . + . REPEAT "95" # maximal forward repeat
Adh reputer repeat 1379779 1379860 . + . REPEAT "26" # maximal forward repeat
Adh reputer repeat 1379878 1380037 . + . REPEAT "64" # maximal forward repeat
Adh calypso tandemrepeat 1383109 1383132 . + 0 MAGPIE_CTG "dm_031" # 12 x CA
Adh MAGPIE promotor 1385082 1385121 . - 2 MAGPIE_ID "dm_031_MP_dna_4"
Adh MAGPIE promotor 1386585 1386624 . + 2 MAGPIE_ID "dm_031_GS_dna_5"
Adh MAGPIE exon 1387013 1387294 0.590 + 1 MAGPIE_ID "dm_031_GS_dna_5" #dm_031_GS_5.01
Adh MAGPIE gene 1387013 1387294 . - 1 MAGPIE_ID "dm_031_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1387785 1387790 . + 2 MAGPIE_ID "dm_031_GS_dna_5"
Adh MAGPIE polyA_signal 1388112 1388117 . - 0 MAGPIE_ID "dm_031_GS_dna_6"
Adh calypso tandemrepeat 1388183 1388207 . + 1 MAGPIE_CTG "dm_031" # 25 x T
Adh calypso tandemrepeat 1391263 1391278 . + 0 MAGPIE_CTG "dm_031" # 4 x CATA
Adh calypso tandemrepeat 1391416 1391431 . + 0 MAGPIE_CTG "dm_031" # 8 x CA
Adh calypso tandemrepeat 1392437 1392456 . + 1 MAGPIE_CTG "dm_031" # 4 x TTTCG
Adh MAGPIE polyA_signal 1395331 1395336 . - 2 MAGPIE_ID "dm_032_GS_dna_1"
Adh calypso tandemrepeat 1395819 1395837 . + 2 MAGPIE_CTG "dm_031" # 19 x C
Adh calypso tandemrepeat 1395819 1395837 . + 2 MAGPIE_CTG "dm_032" # 19 x C
Adh MAGPIE exon 1398183 1398833 0.088 - 0 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.12
Adh MAGPIE exon 1398183 1398833 0.355 - 0 MAGPIE_ID "dm_031_GS_dna_6" #dm_031_GS_6.01
Adh MAGPIE gene 1398183 1398833 3 - 0 MAGPIE_ID "dm_031_GS_dna_6" # DE sperm mitochondrial CAP (197 aa);ST putative;TY single function;CC Matches repetitive region;
Adh calypso tandemrepeat 1399035 1399051 . + 2 MAGPIE_CTG "dm_031" # 17 x T
Adh calypso tandemrepeat 1399035 1399051 . + 2 MAGPIE_CTG "dm_032" # 17 x T
Adh MAGPIE exon 1401633 1401874 0.470 - 1 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.11
Adh calypso tandemrepeat 1401995 1402009 . + 1 MAGPIE_CTG "dm_032" # 3 x GATTG
Adh MAGPIE exon 1402535 1402643 0.962 - 0 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.10
Adh MAGPIE exon 1402808 1402995 0.822 - 2 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.09
Adh MAGPIE exon 1403930 1404111 0.828 - 2 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.08
Adh calypso tandemrepeat 1404251 1404268 . + 1 MAGPIE_CTG "dm_032" # 9 x GT
Adh MAGPIE exon 1405762 1405903 0.999 - 1 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.07
Adh calypso tandemrepeat 1406009 1406029 . + 1 MAGPIE_CTG "dm_032" # 7 x AGC
Adh MAGPIE exon 1406801 1406882 0.986 - 0 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.06
Adh MAGPIE exon 1407035 1407146 0.889 - 0 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.05
Adh calypso tandemrepeat 1408221 1408235 . + 2 MAGPIE_CTG "dm_032" # 3 x ACAAG
Adh MAGPIE exon 1408830 1408932 0.986 - 2 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.04
Adh calypso tandemrepeat 1410789 1410806 . + 2 MAGPIE_CTG "dm_032" # 3 x GCAGTG
Adh calypso tandemrepeat 1410848 1410865 . + 1 MAGPIE_CTG "dm_032" # 6 x TCA
Adh MAGPIE exon 1411600 1411759 0.773 - 1 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.03
Adh MAGPIE exon 1412611 1412741 0.737 - 0 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.02
Adh MAGPIE exon 1413022 1413067 0.542 - 1 MAGPIE_ID "dm_032_GS_dna_1" #dm_032_GS_1.01
Adh MAGPIE gene 1398183 1413067 3 + 2 MAGPIE_ID "dm_032_GS_dna_1" # DE sperm mitochondrial CAP (197 aa);ST putative;TY single function;CC Matches repetitive region;
Adh MAGPIE promotor 1414087 1414126 . - 1 MAGPIE_ID "dm_032_GS_dna_1"
Adh MAGPIE promotor 1414178 1414217 . + 1 MAGPIE_ID "dm_032_GS_dna_2"
Adh MAGPIE exon 1414397 1418081 0.999 + 1 MAGPIE_ID "dm_032_GS_dna_2" #dm_032_GS_2.01
Adh MAGPIE exon 1418142 1419321 0.999 + 2 MAGPIE_ID "dm_032_GS_dna_2" #dm_032_GS_2.02
Adh MAGPIE exon 1419378 1419918 0.999 + 2 MAGPIE_ID "dm_032_GS_dna_2" #dm_032_GS_2.03
Adh MAGPIE gene 1414397 1419918 1 + 1 MAGPIE_ID "dm_032_GS_dna_2" # DE kiaa0963 protein (1366 aa);ST putative;TY single function;CC Close (but not exact) match to Drosophila sno protein; Gene duplication?;
Adh MAGPIE polyA_signal 1420095 1420100 . + 2 MAGPIE_ID "dm_032_GS_dna_2"
Adh MAGPIE polyA_signal 1420367 1420372 . - 1 MAGPIE_ID "dm_032_GS_dna_3"
Adh MAGPIE exon 1421921 1422143 0.942 - 0 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.10
Adh MAGPIE exon 1422176 1422320 0.944 - 0 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.09
Adh calypso tandemrepeat 1424247 1424264 . + 2 MAGPIE_CTG "dm_032" # 3 x GTTCTG
Adh MAGPIE exon 1424531 1424676 0.240 - 2 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.08
Adh calypso tandemrepeat 1424790 1424804 . + 2 MAGPIE_CTG "dm_032" # 15 x C
Adh calypso tandemrepeat 1425005 1425020 . + 1 MAGPIE_CTG "dm_032" # 4 x TGGA
Adh MAGPIE exon 1424926 1425041 0.006 - 0 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.07
Adh MAGPIE exon 1425646 1425752 0.004 - 0 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.06
Adh calypso tandemrepeat 1426058 1426079 . + 1 MAGPIE_CTG "dm_032" # 11 x TG
Adh MAGPIE exon 1426168 1426281 0.998 - 2 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.05
Adh MAGPIE exon 1426393 1426486 0.706 - 1 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.04
Adh calypso tandemrepeat 1427823 1427838 . + 2 MAGPIE_CTG "dm_032" # 4 x GTAT
Adh MAGPIE exon 1428573 1428690 0.186 - 2 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.03
Adh calypso tandemrepeat 1429907 1429921 . + 1 MAGPIE_CTG "dm_032" # 15 x T
Adh MAGPIE exon 1431180 1431306 0.145 - 2 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.02
Adh MAGPIE exon 1432142 1432223 0.078 - 0 MAGPIE_ID "dm_032_GS_dna_3" #dm_032_GS_3.01
Adh MAGPIE gene 1421921 1432223 3 + 1 MAGPIE_ID "dm_032_GS_dna_3" # DE neuromusculin - fruit fly (1011 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1432581 1432620 . - 2 MAGPIE_ID "dm_032_GS_dna_3"
Adh MAGPIE promotor 1432803 1432842 . + 2 MAGPIE_ID "dm_032_GS_dna_4"
Adh MAGPIE exon 1433247 1433480 0.939 + 2 MAGPIE_ID "dm_032_GS_dna_4" #dm_032_GS_4.01
Adh calypso tandemrepeat 1434683 1434698 . + 1 MAGPIE_CTG "dm_032" # 16 x T
Adh MAGPIE exon 1435469 1435552 0.886 + 1 MAGPIE_ID "dm_032_GS_dna_4" #dm_032_GS_4.02
Adh MAGPIE exon 1438345 1438432 0.760 + 0 MAGPIE_ID "dm_032_GS_dna_4" #dm_032_GS_4.03
Adh MAGPIE exon 1439326 1439513 0.138 + 0 MAGPIE_ID "dm_032_GS_dna_4" #dm_032_GS_4.04
Adh MAGPIE gene 1433247 1439513 . + 2 MAGPIE_ID "dm_032_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1442341 1442346 . + 0 MAGPIE_ID "dm_032_GS_dna_4"
Adh MAGPIE exon 1443348 1443405 0.516 + 2 MAGPIE_ID "dm_033_GS_dna_1" #dm_033_GS_1.01
Adh MAGPIE exon 1445532 1445710 0.907 + 2 MAGPIE_ID "dm_033_GS_dna_1" #dm_033_GS_1.02
Adh MAGPIE exon 1446481 1446622 0.417 + 0 MAGPIE_ID "dm_033_GS_dna_1" #dm_033_GS_1.03
Adh calypso tandemrepeat 1449707 1449722 . + 1 MAGPIE_CTG "dm_033" # 16 x T
Adh MAGPIE exon 1450916 1451046 0.711 + 1 MAGPIE_ID "dm_033_GS_dna_1" #dm_033_GS_1.04
Adh MAGPIE gene 1443348 1451046 . + 2 MAGPIE_ID "dm_033_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1451589 1451594 . + 2 MAGPIE_ID "dm_033_GS_dna_1"
Adh MAGPIE polyA_signal 1451665 1451670 . - 2 MAGPIE_ID "dm_033_GS_dna_2"
Adh MAGPIE exon 1452315 1452770 0.222 - 0 MAGPIE_ID "dm_033_GS_dna_2" #dm_033_GS_2.01
Adh MAGPIE gene 1452315 1452770 . + 2 MAGPIE_ID "dm_033_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1453167 1453186 . + 2 MAGPIE_CTG "dm_033" # 10 x TA
Adh MAGPIE promotor 1454082 1454121 . - 2 MAGPIE_ID "dm_033_GS_dna_2"
Adh calypso tandemrepeat 1454595 1454609 . + 2 MAGPIE_CTG "dm_033" # 5 x ATA
Adh MAGPIE promotor 1454587 1454626 . + 0 MAGPIE_ID "dm_033_GS_dna_3"
Adh MAGPIE exon 1454896 1455060 0.249 + 0 MAGPIE_ID "dm_033_GS_dna_3" #dm_033_GS_3.01
Adh MAGPIE exon 1458338 1458694 0.248 + 1 MAGPIE_ID "dm_033_GS_dna_3" #dm_033_GS_3.02
Adh MAGPIE gene 1454896 1458694 . + 0 MAGPIE_ID "dm_033_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1458902 1458907 . + 1 MAGPIE_ID "dm_033_GS_dna_3"
Adh MAGPIE polyA_signal 1458937 1458942 . - 2 MAGPIE_ID "dm_033_GS_dna_4"
Adh calypso tandemrepeat 1461482 1461497 . + 1 MAGPIE_CTG "dm_033" # 8 x AC
Adh MAGPIE exon 1461904 1462087 0.133 - 1 MAGPIE_ID "dm_033_GS_dna_4" #dm_033_GS_4.03
Adh calypso tandemrepeat 1463470 1463494 . + 0 MAGPIE_CTG "dm_033" # 5 x TTCAG
Adh calypso tandemrepeat 1463496 1463510 . + 2 MAGPIE_CTG "dm_033" # 3 x CAATG
Adh calypso tandemrepeat 1463860 1463874 . + 0 MAGPIE_CTG "dm_033" # 3 x TATTT
Adh MAGPIE exon 1466153 1466744 0.092 - 0 MAGPIE_ID "dm_033_GS_dna_4" #dm_033_GS_4.02
Adh MAGPIE exon 1466876 1467095 0.023 - 0 MAGPIE_ID "dm_033_GS_dna_4" #dm_033_GS_4.01
Adh MAGPIE gene 1461904 1467095 1 + 0 MAGPIE_ID "dm_033_GS_dna_4" # DE LD17401.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 1468812 1468851 . - 2 MAGPIE_ID "dm_033_GS_dna_4"
Adh MAGPIE polyA_signal 1468943 1468948 . - 1 MAGPIE_ID "dm_033_GS_dna_5"
Adh calypso tandemrepeat 1472445 1472460 . + 2 MAGPIE_CTG "dm_033" # 4 x AGTG
Adh MAGPIE exon 1472586 1472723 0.796 - 0 MAGPIE_ID "dm_033_GS_dna_5" #dm_033_GS_5.02
Adh MAGPIE exon 1473468 1473791 0.805 - 0 MAGPIE_ID "dm_033_GS_dna_5" #dm_033_GS_5.01
Adh MAGPIE gene 1472586 1473791 2 + 2 MAGPIE_ID "dm_033_GS_dna_5" # DE LD13118.5prime EST drosophila;ST putative;TY single function;CC Only EST matches;
Adh MAGPIE promotor 1474057 1474096 . - 1 MAGPIE_ID "dm_033_GS_dna_5"
Adh calypso tandemrepeat 1474088 1474113 . + 1 MAGPIE_CTG "dm_033" # 13 x TA
Adh reputer repeat 1474137 1474211 . + . REPEAT "70" # maximal forward repeat
Adh reputer repeat 1474137 1474211 . + . REPEAT "72" # maximal forward repeat
Adh reputer repeat 1474250 1474324 . + . REPEAT "70" # maximal forward repeat
Adh reputer repeat 1474250 1474324 . + . REPEAT "71" # maximal forward repeat
Adh MAGPIE promotor 1474397 1474436 . + 1 MAGPIE_ID "dm_033_GS_dna_6"
Adh reputer repeat 1474114 1474631 . + . REPEAT "20" # maximal forward repeat
Adh MAGPIE exon 1475691 1476936 0.810 + 2 MAGPIE_ID "dm_033_GS_dna_6" #dm_033_GS_6.01
Adh MAGPIE exon 1476945 1480096 0.916 + 2 MAGPIE_ID "dm_033_GS_dna_6" #dm_033_GS_6.02
Adh MAGPIE gene 1475691 1480096 1 + 2 MAGPIE_ID "dm_033_GS_dna_6" # DE prgag-pol - fruitfly (1463 aa);ST putative;TY single function;CC transposon?;
Adh MAGPIE polyA_signal 1480147 1480152 . + 0 MAGPIE_ID "dm_033_GS_dna_6"
Adh calypso tandemrepeat 1480217 1480252 . + 1 MAGPIE_CTG "dm_033" # 36 x A
Adh MAGPIE promotor 1480353 1480392 . + 2 MAGPIE_ID "dm_033_GS_dna_7"
Adh MAGPIE exon 1480661 1481086 0.978 + 1 MAGPIE_ID "dm_033_GS_dna_7" #dm_033_GS_7.01
Adh MAGPIE gene 1480661 1481086 . + 1 MAGPIE_ID "dm_033_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1481117 1481122 . + 1 MAGPIE_ID "dm_033_GS_dna_7"
Adh reputer repeat 1481140 1481214 . + . REPEAT "71" # maximal forward repeat
Adh reputer repeat 1481140 1481214 . + . REPEAT "73" # maximal forward repeat
Adh reputer repeat 1481253 1481327 . + . REPEAT "72" # maximal forward repeat
Adh reputer repeat 1481253 1481327 . + . REPEAT "73" # maximal forward repeat
Adh MAGPIE promotor 1481400 1481439 . + 2 MAGPIE_ID "dm_033_GS_dna_8"
Adh MAGPIE exon 1481557 1481576 0.809 + 0 MAGPIE_ID "dm_033_GS_dna_8" #dm_033_GS_8.01
Adh reputer repeat 1481117 1481634 . + . REPEAT "20" # maximal forward repeat
Adh calypso tandemrepeat 1484215 1484229 . + 0 MAGPIE_CTG "dm_033" # 5 x TGC
Adh MAGPIE exon 1484424 1484782 0.485 + 2 MAGPIE_ID "dm_033_GS_dna_8" #dm_033_GS_8.02
Adh calypso tandemrepeat 1484928 1484942 . + 2 MAGPIE_CTG "dm_033" # 5 x AAT
Adh calypso tandemrepeat 1485335 1485356 . + 1 MAGPIE_CTG "dm_033" # 11 x TC
Adh calypso tandemrepeat 1485335 1485356 . + 1 MAGPIE_CTG "dm_034" # 11 x TC
Adh MAGPIE exon 1487158 1487326 0.459 + 0 MAGPIE_ID "dm_034_GS_dna_1" #dm_034_GS_1.01
Adh MAGPIE exon 1487158 1487326 0.626 + 0 MAGPIE_ID "dm_033_GS_dna_8" #dm_033_GS_8.03
Adh MAGPIE exon 1488069 1488120 0.644 + 2 MAGPIE_ID "dm_033_GS_dna_8" #dm_033_GS_8.04
Adh MAGPIE exon 1488069 1488120 0.685 + 2 MAGPIE_ID "dm_034_GS_dna_1" #dm_034_GS_1.02
Adh MAGPIE exon 1489262 1489834 0.699 + 1 MAGPIE_ID "dm_033_GS_dna_8" #dm_033_GS_8.05
Adh MAGPIE exon 1489262 1489834 0.701 + 1 MAGPIE_ID "dm_034_GS_dna_1" #dm_034_GS_1.03
Adh MAGPIE gene 1481557 1489834 . + 0 MAGPIE_ID "dm_033_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 1487158 1489834 . + 0 MAGPIE_ID "dm_034_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1489910 1489915 . + 1 MAGPIE_ID "dm_033_GS_dna_8"
Adh MAGPIE polyA_signal 1490056 1490061 . + 0 MAGPIE_ID "dm_034_GS_dna_1"
Adh MAGPIE promotor 1490707 1490746 . + 0 MAGPIE_ID "dm_034_GS_dna_2"
Adh MAGPIE exon 1493680 1493718 0.533 + 0 MAGPIE_ID "dm_034_GS_dna_2" #dm_034_GS_2.01
Adh MAGPIE exon 1495620 1496198 0.719 + 2 MAGPIE_ID "dm_034_GS_dna_2" #dm_034_GS_2.02
Adh MAGPIE gene 1493680 1496198 1 + 0 MAGPIE_ID "dm_034_GS_dna_2" # DE GH17154.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 1496246 1496251 . + 1 MAGPIE_ID "dm_034_GS_dna_2"
Adh MAGPIE polyA_signal 1496264 1496269 . - 1 MAGPIE_ID "dm_034_GS_dna_3"
Adh MAGPIE exon 1496304 1496815 0.999 - 1 MAGPIE_ID "dm_034_GS_dna_3" #dm_034_GS_3.02
Adh MAGPIE exon 1496865 1497000 0.999 - 2 MAGPIE_ID "dm_034_GS_dna_3" #dm_034_GS_3.01
Adh MAGPIE gene 1496304 1497000 1 + 2 MAGPIE_ID "dm_034_GS_dna_3" # DE fetal globin inducing factor;ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE promotor 1497344 1497383 . - 0 MAGPIE_ID "dm_034_GS_dna_3"
Adh MAGPIE promotor 1497394 1497433 . + 0 MAGPIE_ID "dm_034_GS_dna_4"
Adh calypso tandemrepeat 1497539 1497554 . + 1 MAGPIE_CTG "dm_034" # 4 x GTTT
Adh MAGPIE exon 1497576 1498121 0.999 + 2 MAGPIE_ID "dm_034_GS_dna_4" #dm_034_GS_4.01
Adh MAGPIE gene 1497576 1498121 1 + 2 MAGPIE_ID "dm_034_GS_dna_4" # DE Dr1 - Xenopus sp. (175 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 1498166 1498171 . + 1 MAGPIE_ID "dm_034_GS_dna_4"
Adh MAGPIE polyA_signal 1498297 1498302 . - 2 MAGPIE_ID "dm_034_GS_dna_5"
Adh MAGPIE exon 1498334 1499046 0.999 - 2 MAGPIE_ID "dm_034_GS_dna_5" #dm_034_GS_5.02
Adh MAGPIE exon 1499102 1499249 0.995 - 0 MAGPIE_ID "dm_034_GS_dna_5" #dm_034_GS_5.01
Adh MAGPIE gene 1498334 1499249 1 + 1 MAGPIE_ID "dm_034_GS_dna_5" # DE hypothetical protein (261 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1499389 1499428 . - 1 MAGPIE_ID "dm_034_GS_dna_5"
Adh MAGPIE promotor 1499556 1499595 . + 2 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE start_codon 1499670 1499672 . + 2 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE CDS 1499670 1500870 . + 2 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE splice5 1500870 1500871 . + 2 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE splice3 1500927 1500928 . + 2 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE CDS 1500928 1501010 . + 0 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE gene 1499670 1501010 1 + 2 MAGPIE_ID "dm_034_MP_dna_6" # DE BcDNA.LD22017, drosophila (427 aa);ST putative;TY single function;
Adh calypso tandemrepeat 1502345 1502360 . + 1 MAGPIE_CTG "dm_034" # 8 x AC
Adh calypso tandemrepeat 1503315 1503342 . + 2 MAGPIE_CTG "dm_034" # 14 x TC
Adh calypso tandemrepeat 1503409 1503424 . + 0 MAGPIE_CTG "dm_034" # 8 x GT
Adh calypso tandemrepeat 1506742 1506759 . + 0 MAGPIE_CTG "dm_034" # 6 x AAC
Adh calypso tandemrepeat 1506997 1507014 . + 0 MAGPIE_CTG "dm_034" # 6 x AAC
Adh calypso tandemrepeat 1507601 1507615 . + 1 MAGPIE_CTG "dm_034" # 3 x AGTGA
Adh calypso tandemrepeat 1510453 1510476 . + 0 MAGPIE_CTG "dm_034" # 4 x TTTTGG
Adh calypso tandemrepeat 1510600 1510623 . + 0 MAGPIE_CTG "dm_034" # 4 x TATTTG
Adh calypso tandemrepeat 1511544 1511561 . + 2 MAGPIE_CTG "dm_034" # 3 x GGCTGG
Adh calypso tandemrepeat 1512918 1512937 . + 2 MAGPIE_CTG "dm_034" # 4 x TGGTC
Adh calypso tandemrepeat 1512943 1512962 . + 0 MAGPIE_CTG "dm_034" # 4 x AGTTC
Adh calypso tandemrepeat 1514284 1514299 . + 0 MAGPIE_CTG "dm_034" # 4 x GTAT
Adh blastx similarity 1519243 1519395 2e-63 + 0 MAGPIE_CTG "dm_034" #>gi|4378754|gb|AAD19658| (AF110797) GABAb receptor subtype 1c form a
Adh calypso tandemrepeat 1523467 1523482 . + 0 MAGPIE_CTG "dm_034" # 4 x TCAC
Adh MAGPIE polyA_signal 1527473 1527478 . + 1 MAGPIE_ID "dm_034_MP_dna_6"
Adh MAGPIE polyA_signal 1527494 1527499 . - 1 MAGPIE_ID "dm_034_GS_dna_7"
Adh MAGPIE exon 1527523 1527636 0.916 - 2 MAGPIE_ID "dm_034_GS_dna_7" #dm_034_GS_7.03
Adh MAGPIE exon 1527705 1528201 0.624 - 1 MAGPIE_ID "dm_034_GS_dna_7" #dm_034_GS_7.02
Adh MAGPIE exon 1528291 1528426 0.889 - 1 MAGPIE_ID "dm_034_GS_dna_7" #dm_034_GS_7.01
Adh MAGPIE gene 1527523 1528426 1 + 0 MAGPIE_ID "dm_034_GS_dna_7" # DE unknown gene product;ST putative;TY single function;CC No exact matches in Drosophila;
Adh MAGPIE promotor 1528714 1528753 . - 1 MAGPIE_ID "dm_034_GS_dna_7"
Adh MAGPIE promotor 1529034 1529073 . + 2 MAGPIE_ID "dm_034_MP_dna_8"
Adh calypso tandemrepeat 1529451 1529465 . + 2 MAGPIE_CTG "dm_034" # 5 x CAA
Adh MAGPIE start_codon 1529588 1529590 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh calypso tandemrepeat 1529795 1529809 . + 1 MAGPIE_CTG "dm_034" # 5 x CAG
Adh calypso tandemrepeat 1529810 1529827 . + 1 MAGPIE_CTG "dm_034" # 6 x CAA
Adh MAGPIE CDS 1529588 1529971 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE splice5 1529971 1529972 . + 0 MAGPIE_ID "dm_034_MP_dna_8"
Adh calypso tandemrepeat 1530718 1530733 . + 0 MAGPIE_CTG "dm_034" # 4 x TCTG
Adh calypso tandemrepeat 1530718 1530733 . + 0 MAGPIE_CTG "dm_035" # 4 x TCTG
Adh MAGPIE splice3 1530745 1530746 . + 0 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE CDS 1530746 1531626 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE exon 1530746 1531626 0.798 + 1 MAGPIE_ID "dm_035_GS_dna_1" #dm_035_GS_1.01
Adh MAGPIE splice5 1531626 1531627 . + 2 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE splice3 1531684 1531685 . + 0 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE CDS 1531685 1531892 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE exon 1531685 1531892 0.999 + 1 MAGPIE_ID "dm_035_GS_dna_1" #dm_035_GS_1.02
Adh MAGPIE splice5 1531892 1531893 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE splice3 1531957 1531958 . + 0 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE CDS 1531958 1532269 . + 1 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE exon 1531958 1532269 0.847 + 1 MAGPIE_ID "dm_035_GS_dna_1" #dm_035_GS_1.03
Adh MAGPIE gene 1529588 1532269 1 + 1 MAGPIE_ID "dm_034_MP_dna_8" # GN Suppressor of Hairless;FC RNA polymerase and transcription factors;DE J kappa-recombination signal binding protein - suppressor of hairless (594 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE gene 1530746 1532269 1 + 1 MAGPIE_ID "dm_035_GS_dna_1" # DE j-kappa recombination signal-bin (550 aa);ST putative;TY single function;CC Fully annotated in dm_034.;
Adh calypso tandemrepeat 1532513 1532528 . + 1 MAGPIE_CTG "dm_034" # 4 x ACAT
Adh calypso tandemrepeat 1532513 1532528 . + 1 MAGPIE_CTG "dm_035" # 4 x ACAT
Adh MAGPIE polyA_signal 1532868 1532873 . + 2 MAGPIE_ID "dm_035_GS_dna_1"
Adh MAGPIE polyA_signal 1532914 1532919 . - 2 MAGPIE_ID "dm_035_GS_dna_2"
Adh MAGPIE exon 1533935 1533994 0.458 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.11
Adh MAGPIE polyA_signal 1534948 1534953 . + 0 MAGPIE_ID "dm_034_MP_dna_8"
Adh MAGPIE exon 1535341 1535461 0.359 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.10
Adh blastx similarity 1535071 1535463 0.0 - 2 MAGPIE_CTG "dm_035" #>gi|4505307|ref|NP_000251.1|pMYO7A| myosin VIIA
Adh MAGPIE exon 1535530 1535676 0.369 - 2 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.09
Adh MAGPIE exon 1535739 1536304 0.683 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.08
Adh MAGPIE exon 1536364 1537150 0.999 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.07
Adh MAGPIE exon 1537212 1538662 0.999 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.06
Adh MAGPIE exon 1538719 1541113 0.962 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.05
Adh MAGPIE exon 1541178 1541378 0.992 - 0 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.04
Adh MAGPIE exon 1541445 1541794 0.952 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.03
Adh MAGPIE exon 1542125 1542385 0.997 - 1 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.02
Adh MAGPIE exon 1543065 1543082 0.687 - 0 MAGPIE_ID "dm_035_GS_dna_2" #dm_035_GS_2.01
Adh MAGPIE gene 1533935 1543082 1 + 1 MAGPIE_ID "dm_035_GS_dna_2" # DE myosin VIIa (2175 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1545110 1545149 . - 0 MAGPIE_ID "dm_035_GS_dna_2"
Adh MAGPIE promotor 1546524 1546563 . + 2 MAGPIE_ID "dm_035_GS_dna_3"
Adh MAGPIE exon 1546679 1546741 0.097 + 1 MAGPIE_ID "dm_035_GS_dna_3" #dm_035_GS_3.01
Adh MAGPIE exon 1547173 1547386 0.835 + 0 MAGPIE_ID "dm_035_GS_dna_3" #dm_035_GS_3.02
Adh MAGPIE exon 1547883 1548319 0.869 + 2 MAGPIE_ID "dm_035_GS_dna_3" #dm_035_GS_3.03
Adh MAGPIE exon 1548383 1548538 0.851 + 1 MAGPIE_ID "dm_035_GS_dna_3" #dm_035_GS_3.04
Adh MAGPIE gene 1546679 1548538 . + 1 MAGPIE_ID "dm_035_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1548906 1548911 . + 2 MAGPIE_ID "dm_035_GS_dna_3"
Adh MAGPIE polyA_signal 1548956 1548961 . - 1 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE stop_codon 1549142 1549144 . - 1 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE CDS 1549142 1550017 . - 1 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE splice5 1550017 1550018 . - 0 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE splice3 1550083 1550084 . - 0 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE CDS 1550084 1550149 . - 1 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE gene 1549142 1550149 1 - 1 MAGPIE_ID "dm_035_MP_dna_4" # GN RNA polymerase II elongation factor;FC RNA polymerase and transcription factors;DE RNA Polymerase II elongation factor (313 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 1550147 1550149 . - 1 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE promotor 1550435 1550474 . - 0 MAGPIE_ID "dm_035_MP_dna_4"
Adh MAGPIE polyA_signal 1551833 1551838 . - 1 MAGPIE_ID "dm_035_GS_dna_5"
Adh MAGPIE exon 1554085 1554599 0.918 - 0 MAGPIE_ID "dm_035_GS_dna_5" #dm_035_GS_5.03
Adh MAGPIE exon 1554841 1555107 0.999 - 2 MAGPIE_ID "dm_035_GS_dna_5" #dm_035_GS_5.02
Adh MAGPIE exon 1556588 1557278 0.992 - 0 MAGPIE_ID "dm_035_GS_dna_5" #dm_035_GS_5.01
Adh MAGPIE gene 1554085 1557278 2 + 0 MAGPIE_ID "dm_035_GS_dna_5" # DE No definition line found;ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1557459 1557498 . - 2 MAGPIE_ID "dm_035_GS_dna_5"
Adh MAGPIE promotor 1557916 1557955 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE start_codon 1558057 1558059 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1558057 1558080 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1558080 1558081 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1558133 1558134 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1558134 1558521 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1558521 1558522 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1561988 1561989 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh calypso tandemrepeat 1562132 1562146 . + 1 MAGPIE_CTG "dm_035" # 5 x AAT
Adh MAGPIE CDS 1561989 1562278 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1562278 1562279 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1562337 1562338 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1562338 1563081 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1563081 1563082 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1563139 1563140 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1563140 1563353 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1563353 1563354 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1563417 1563418 . + 2 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1563418 1563689 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice5 1563689 1563690 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE splice3 1563760 1563761 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE CDS 1563761 1563814 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE gene 1558057 1563814 1 + 0 MAGPIE_ID "dm_035_MP_dna_6" # GN vasa;EC 3.6.1.3;DE Vasa protein - atpase (DNA-dependent);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE stop_codon 1563812 1563814 . + 1 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE polyA_signal 1563928 1563933 . + 0 MAGPIE_ID "dm_035_MP_dna_6"
Adh MAGPIE promotor 1565240 1565279 . + 1 MAGPIE_ID "dm_035_GS_dna_7"
Adh MAGPIE exon 1565296 1565530 0.626 + 0 MAGPIE_ID "dm_035_GS_dna_7" #dm_035_GS_7.01
Adh MAGPIE exon 1575016 1575163 0.674 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.01
Adh calypso tandemrepeat 1575182 1575199 . + 1 MAGPIE_CTG "dm_035" # 3 x GATTTG
Adh calypso tandemrepeat 1575182 1575199 . + 1 MAGPIE_CTG "dm_036" # 3 x GATTTG
Adh MAGPIE exon 1576691 1576943 0.996 + 1 MAGPIE_ID "dm_035_GS_dna_7" #dm_035_GS_7.02
Adh MAGPIE exon 1576691 1576943 0.998 + 1 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.02
Adh MAGPIE exon 1577036 1577406 0.993 + 1 MAGPIE_ID "dm_035_GS_dna_7" #dm_035_GS_7.03
Adh MAGPIE exon 1577036 1577406 0.993 + 1 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.03
Adh MAGPIE exon 1577568 1577860 0.603 + 2 MAGPIE_ID "dm_035_GS_dna_7" #dm_035_GS_7.04
Adh MAGPIE exon 1577568 1577860 0.611 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.04
Adh MAGPIE exon 1577926 1578081 0.418 + 0 MAGPIE_ID "dm_035_GS_dna_7" #dm_035_GS_7.05
Adh MAGPIE exon 1577926 1578081 0.847 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.05
Adh MAGPIE gene 1565296 1578081 3 + 0 MAGPIE_ID "dm_035_GS_dna_7" # DE HL08022.5prime HL EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 1580550 1580685 0.840 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.06
Adh MAGPIE exon 1580750 1580880 0.957 + 1 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.07
Adh MAGPIE exon 1580946 1581227 0.944 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.08
Adh MAGPIE exon 1581294 1581623 0.978 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.09
Adh MAGPIE exon 1581774 1582136 0.968 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.10
Adh MAGPIE exon 1582201 1582292 0.998 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.11
Adh MAGPIE exon 1582550 1582687 0.997 + 1 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.12
Adh MAGPIE exon 1583070 1583334 0.999 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.13
Adh MAGPIE exon 1583785 1583883 0.906 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.14
Adh MAGPIE exon 1584330 1584828 0.999 + 2 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.15
Adh MAGPIE exon 1584949 1585094 0.999 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.16
Adh MAGPIE exon 1585153 1585380 0.996 + 0 MAGPIE_ID "dm_036_GS_dna_1" #dm_036_GS_1.17
Adh MAGPIE gene 1575016 1585380 2 + 0 MAGPIE_ID "dm_036_GS_dna_1" # DE abnormal X segregation (646 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 1585384 1585389 . + 0 MAGPIE_ID "dm_036_GS_dna_1"
Adh MAGPIE polyA_signal 1585607 1585612 . - 1 MAGPIE_ID "dm_036_GS_dna_2"
Adh MAGPIE exon 1586105 1586211 0.445 - 2 MAGPIE_ID "dm_036_GS_dna_2" #dm_036_GS_2.04
Adh calypso tandemrepeat 1587202 1587216 . + 0 MAGPIE_CTG "dm_036" # 3 x TTTTC
Adh calypso tandemrepeat 1587379 1587396 . + 0 MAGPIE_CTG "dm_036" # 3 x CGTCAT
Adh MAGPIE exon 1587316 1587428 0.167 - 0 MAGPIE_ID "dm_036_GS_dna_2" #dm_036_GS_2.03
Adh calypso tandemrepeat 1588087 1588102 . + 0 MAGPIE_CTG "dm_036" # 16 x A
Adh calypso tandemrepeat 1588215 1588229 . + 2 MAGPIE_CTG "dm_036" # 5 x GAT
Adh calypso tandemrepeat 1588231 1588245 . + 0 MAGPIE_CTG "dm_036" # 5 x ATG
Adh MAGPIE exon 1588473 1588744 0.189 - 1 MAGPIE_ID "dm_036_GS_dna_2" #dm_036_GS_2.02
Adh MAGPIE exon 1588816 1588872 0.384 - 2 MAGPIE_ID "dm_036_GS_dna_2" #dm_036_GS_2.01
Adh MAGPIE gene 1586105 1588872 . + 1 MAGPIE_ID "dm_036_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1590481 1590498 . + 0 MAGPIE_CTG "dm_036" # 3 x AACTGC
Adh calypso tandemrepeat 1590793 1590809 . + 0 MAGPIE_CTG "dm_036" # 17 x T
Adh MAGPIE promotor 1590997 1591036 . - 1 MAGPIE_ID "dm_036_GS_dna_2"
Adh MAGPIE polyA_signal 1591247 1591252 . - 1 MAGPIE_ID "dm_036_GS_dna_3"
Adh calypso tandemrepeat 1591791 1591808 . + 2 MAGPIE_CTG "dm_036" # 9 x AT
Adh MAGPIE exon 1591829 1592257 0.975 - 1 MAGPIE_ID "dm_036_GS_dna_3" #dm_036_GS_3.04
Adh calypso tandemrepeat 1592540 1592554 . + 1 MAGPIE_CTG "dm_036" # 3 x ACTTA
Adh MAGPIE exon 1596595 1596727 0.227 - 1 MAGPIE_ID "dm_036_GS_dna_3" #dm_036_GS_3.03
Adh calypso tandemrepeat 1597043 1597060 . + 1 MAGPIE_CTG "dm_036" # 3 x GGAGAT
Adh MAGPIE exon 1597096 1597214 0.730 - 0 MAGPIE_ID "dm_036_GS_dna_3" #dm_036_GS_3.02
Adh MAGPIE exon 1597932 1597970 0.671 - 0 MAGPIE_ID "dm_036_GS_dna_3" #dm_036_GS_3.01
Adh MAGPIE gene 1591829 1597970 . + 1 MAGPIE_ID "dm_036_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1598225 1598239 . + 1 MAGPIE_CTG "dm_036" # 3 x CTTTA
Adh MAGPIE promotor 1598347 1598386 . - 1 MAGPIE_ID "dm_036_GS_dna_3"
Adh MAGPIE promotor 1598695 1598734 . + 0 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE start_codon 1603541 1603543 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE CDS 1603541 1603885 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice5 1603885 1603886 . + 0 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice3 1603950 1603951 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE CDS 1603951 1605404 . + 0 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice5 1605404 1605405 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice3 1605650 1605651 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE CDS 1605651 1606718 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice5 1606718 1606719 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice3 1606790 1606791 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE CDS 1606791 1607142 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice5 1607142 1607143 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE splice3 1607204 1607205 . + 1 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE CDS 1607205 1607306 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE gene 1603541 1607306 1 + 1 MAGPIE_ID "dm_036_MP_dna_4" # GN shuttle craft;FC RNA polymerase and transcription factors;DE shuttle craft transcription factor (1106 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 1609960 1609980 . + 0 MAGPIE_CTG "dm_036" # 7 x ACG
Adh calypso tandemrepeat 1611748 1611763 . + 0 MAGPIE_CTG "dm_036" # 4 x GCTA
Adh calypso tandemrepeat 1612282 1612299 . + 0 MAGPIE_CTG "dm_036" # 3 x TATATG
Adh calypso tandemrepeat 1613364 1613381 . + 2 MAGPIE_CTG "dm_036" # 18 x A
Adh calypso tandemrepeat 1614603 1614627 . + 2 MAGPIE_CTG "dm_036" # 5 x CTGTT
Adh MAGPIE polyA_signal 1619790 1619795 . + 2 MAGPIE_ID "dm_036_MP_dna_4"
Adh MAGPIE polyA_signal 1619849 1619854 . - 1 MAGPIE_ID "dm_036_GS_dna_5"
Adh MAGPIE exon 1620163 1620290 0.486 - 0 MAGPIE_ID "dm_036_GS_dna_5" #dm_036_GS_5.01
Adh MAGPIE gene 1620163 1620290 . + 0 MAGPIE_ID "dm_036_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1622406 1622601 0.733 + 2 MAGPIE_ID "dm_037_GS_dna_1" #dm_037_GS_1.01
Adh MAGPIE gene 1622406 1622601 . - 2 MAGPIE_ID "dm_037_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1622689 1622694 . + 0 MAGPIE_ID "dm_037_GS_dna_1"
Adh MAGPIE promotor 1624222 1624261 . + 0 MAGPIE_ID "dm_037_GS_dna_2"
Adh MAGPIE exon 1624402 1624528 0.757 + 0 MAGPIE_ID "dm_037_GS_dna_2" #dm_037_GS_2.01
Adh calypso tandemrepeat 1626935 1626952 . + 1 MAGPIE_CTG "dm_037" # 3 x GAATGA
Adh MAGPIE exon 1627325 1627455 0.281 + 1 MAGPIE_ID "dm_037_GS_dna_2" #dm_037_GS_2.02
Adh MAGPIE gene 1624402 1627455 . - 2 MAGPIE_ID "dm_037_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1627558 1627563 . + 0 MAGPIE_ID "dm_037_GS_dna_2"
Adh MAGPIE polyA_signal 1627703 1627708 . - 1 MAGPIE_ID "dm_037_GS_dna_3"
Adh calypso tandemrepeat 1627854 1627869 . + 2 MAGPIE_CTG "dm_037" # 8 x TG
Adh calypso tandemrepeat 1628087 1628104 . + 1 MAGPIE_CTG "dm_037" # 9 x GT
Adh MAGPIE exon 1628213 1628396 0.643 - 0 MAGPIE_ID "dm_037_GS_dna_3" #dm_037_GS_3.02
Adh MAGPIE exon 1630351 1630487 0.868 - 0 MAGPIE_ID "dm_037_GS_dna_3" #dm_037_GS_3.01
Adh MAGPIE gene 1628213 1630487 . - 0 MAGPIE_ID "dm_037_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1631142 1631181 . - 2 MAGPIE_ID "dm_037_GS_dna_3"
Adh MAGPIE polyA_signal 1631658 1631663 . - 0 MAGPIE_ID "dm_037_GS_dna_4"
Adh calypso tandemrepeat 1632832 1632847 . + 0 MAGPIE_CTG "dm_037" # 4 x ATTT
Adh MAGPIE exon 1634224 1634643 0.396 - 2 MAGPIE_ID "dm_037_GS_dna_4" #dm_037_GS_4.05
Adh MAGPIE exon 1635742 1635899 0.351 - 0 MAGPIE_ID "dm_037_GS_dna_4" #dm_037_GS_4.04
Adh calypso tandemrepeat 1637135 1637150 . + 1 MAGPIE_CTG "dm_037" # 4 x AGAC
Adh calypso tandemrepeat 1638662 1638679 . + 1 MAGPIE_CTG "dm_037" # 9 x CA
Adh MAGPIE exon 1638689 1638825 0.241 - 2 MAGPIE_ID "dm_037_GS_dna_4" #dm_037_GS_4.03
Adh MAGPIE exon 1639010 1639282 0.192 - 1 MAGPIE_ID "dm_037_GS_dna_4" #dm_037_GS_4.02
Adh MAGPIE exon 1641051 1641379 0.309 - 1 MAGPIE_ID "dm_037_GS_dna_4" #dm_037_GS_4.01
Adh MAGPIE gene 1634224 1641379 . - 1 MAGPIE_ID "dm_037_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1642210 1642249 . - 1 MAGPIE_ID "dm_037_GS_dna_4"
Adh MAGPIE polyA_signal 1642352 1642357 . - 1 MAGPIE_ID "dm_037_GS_dna_5"
Adh MAGPIE exon 1642383 1642635 0.473 - 2 MAGPIE_ID "dm_037_GS_dna_5" #dm_037_GS_5.04
Adh calypso tandemrepeat 1643978 1643993 . + 1 MAGPIE_CTG "dm_037" # 8 x GT
Adh MAGPIE exon 1644342 1644503 0.373 - 0 MAGPIE_ID "dm_037_GS_dna_5" #dm_037_GS_5.03
Adh MAGPIE exon 1646229 1646560 0.054 - 1 MAGPIE_ID "dm_037_GS_dna_5" #dm_037_GS_5.02
Adh calypso tandemrepeat 1646755 1646772 . + 0 MAGPIE_CTG "dm_037" # 3 x GGTTCT
Adh calypso tandemrepeat 1647252 1647266 . + 2 MAGPIE_CTG "dm_037" # 3 x ATATT
Adh calypso tandemrepeat 1648409 1648424 . + 1 MAGPIE_CTG "dm_037" # 8 x TG
Adh MAGPIE exon 1649449 1649601 0.069 - 2 MAGPIE_ID "dm_037_GS_dna_5" #dm_037_GS_5.01
Adh MAGPIE gene 1642383 1649601 . - 2 MAGPIE_ID "dm_037_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1650073 1650112 . - 1 MAGPIE_ID "dm_037_GS_dna_5"
Adh MAGPIE promotor 1650151 1650190 . + 0 MAGPIE_ID "dm_037_GS_dna_6"
Adh MAGPIE exon 1650318 1650373 0.090 + 2 MAGPIE_ID "dm_037_GS_dna_6" #dm_037_GS_6.01
Adh MAGPIE exon 1650496 1650751 0.870 + 0 MAGPIE_ID "dm_037_GS_dna_6" #dm_037_GS_6.02
Adh MAGPIE gene 1650318 1650751 . - 1 MAGPIE_ID "dm_037_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1650813 1650818 . + 2 MAGPIE_ID "dm_037_GS_dna_6"
Adh MAGPIE polyA_signal 1651550 1651555 . - 1 MAGPIE_ID "dm_037_GS_dna_7"
Adh MAGPIE exon 1653146 1653412 0.940 - 1 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.07
Adh MAGPIE exon 1653857 1657133 0.987 - 0 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.06
Adh MAGPIE exon 1657232 1657342 0.966 - 1 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.05
Adh MAGPIE exon 1661045 1661189 0.978 - 0 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.04
Adh MAGPIE exon 1661787 1661932 0.908 - 1 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.03
Adh calypso tandemrepeat 1661973 1661993 . + 2 MAGPIE_CTG "dm_037" # 21 x A
Adh calypso tandemrepeat 1662717 1662731 . + 2 MAGPIE_CTG "dm_037" # 3 x TTTTG
Adh MAGPIE exon 1665755 1665947 0.700 - 0 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.02
Adh calypso tandemrepeat 1666164 1666181 . + 2 MAGPIE_CTG "dm_037" # 9 x TA
Adh calypso tandemrepeat 1666164 1666181 . + 2 MAGPIE_CTG "dm_038" # 9 x TA
Adh MAGPIE polyA_signal 1666262 1666267 . - 1 MAGPIE_ID "dm_038_GS_dna_1"
Adh calypso tandemrepeat 1667283 1667297 . + 2 MAGPIE_CTG "dm_037" # 3 x AAAAT
Adh calypso tandemrepeat 1667283 1667297 . + 2 MAGPIE_CTG "dm_038" # 3 x AAAAT
Adh MAGPIE exon 1667548 1667970 0.810 - 2 MAGPIE_ID "dm_038_GS_dna_1" #dm_038_GS_1.01
Adh MAGPIE exon 1667694 1667970 0.873 - 2 MAGPIE_ID "dm_037_GS_dna_7" #dm_037_GS_7.01
Adh MAGPIE gene 1653146 1667970 1 - 2 MAGPIE_ID "dm_037_GS_dna_7" # DE chaoptin precursor (PHO (1134 aa);ST putative;TY single function;CC Okay match in Drosophila; gene duplication?;
Adh MAGPIE gene 1667548 1667970 . + 0 MAGPIE_ID "dm_038_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1670821 1670860 . - 1 MAGPIE_ID "dm_038_GS_dna_1"
Adh MAGPIE polyA_signal 1670863 1670868 . - 2 MAGPIE_ID "dm_038_GS_dna_2"
Adh MAGPIE exon 1671018 1671220 0.025 - 1 MAGPIE_ID "dm_038_GS_dna_2" #dm_038_GS_2.03
Adh calypso tandemrepeat 1671293 1671310 . + 1 MAGPIE_CTG "dm_038" # 3 x TGCTCC
Adh calypso tandemrepeat 1676142 1676159 . + 2 MAGPIE_CTG "dm_038" # 9 x TA
Adh MAGPIE exon 1677473 1677640 0.292 - 1 MAGPIE_ID "dm_038_GS_dna_2" #dm_038_GS_2.02
Adh MAGPIE exon 1678182 1678266 0.253 - 2 MAGPIE_ID "dm_038_GS_dna_2" #dm_038_GS_2.01
Adh MAGPIE gene 1671018 1678266 . + 2 MAGPIE_ID "dm_038_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1679001 1679016 . + 2 MAGPIE_CTG "dm_038" # 16 x T
Adh MAGPIE promotor 1679718 1679757 . - 2 MAGPIE_ID "dm_038_GS_dna_2"
Adh MAGPIE promotor 1681051 1681090 . + 0 MAGPIE_ID "dm_038_GS_dna_3"
Adh calypso tandemrepeat 1681584 1681598 . + 2 MAGPIE_CTG "dm_038" # 3 x CGAAT
Adh MAGPIE exon 1684235 1684323 0.104 + 1 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.01
Adh calypso tandemrepeat 1685275 1685294 . + 0 MAGPIE_CTG "dm_038" # 10 x GT
Adh reputer repeat 1686677 1686910 . + . REPEAT "66" # maximal forward repeat
Adh reputer repeat 1686908 1687141 . + . REPEAT "66" # maximal forward repeat
Adh MAGPIE exon 1690012 1690270 0.001 + 0 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.02
Adh calypso tandemrepeat 1691044 1691058 . + 0 MAGPIE_CTG "dm_038" # 3 x TTCGT
Adh calypso tandemrepeat 1693348 1693362 . + 0 MAGPIE_CTG "dm_038" # 3 x AATAA
Adh calypso tandemrepeat 1693841 1693860 . + 1 MAGPIE_CTG "dm_038" # 4 x TTATA
Adh MAGPIE exon 1694369 1694569 0.020 + 1 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.03
Adh MAGPIE exon 1696599 1696755 0.013 + 2 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.04
Adh MAGPIE exon 1697703 1697852 0.162 + 2 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.05
Adh calypso tandemrepeat 1698019 1698038 . + 0 MAGPIE_CTG "dm_038" # 5 x ACCA
Adh MAGPIE exon 1697883 1698259 0.162 + 2 MAGPIE_ID "dm_038_GS_dna_3" #dm_038_GS_3.06
Adh MAGPIE gene 1684235 1698259 . + 1 MAGPIE_ID "dm_038_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1698430 1698435 . + 0 MAGPIE_ID "dm_038_GS_dna_3"
Adh MAGPIE promotor 1699791 1699830 . + 2 MAGPIE_ID "dm_038_GS_dna_4"
Adh MAGPIE exon 1700956 1701285 0.771 + 0 MAGPIE_ID "dm_038_GS_dna_4" #dm_038_GS_4.01
Adh MAGPIE gene 1700956 1701285 . + 0 MAGPIE_ID "dm_038_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1702142 1702156 . + 1 MAGPIE_CTG "dm_038" # 3 x ATGAG
Adh MAGPIE polyA_signal 1702514 1702519 . + 1 MAGPIE_ID "dm_038_GS_dna_4"
Adh MAGPIE polyA_signal 1702721 1702726 . - 1 MAGPIE_ID "dm_038_GS_dna_5"
Adh calypso tandemrepeat 1703828 1703843 . + 1 MAGPIE_CTG "dm_038" # 4 x TTTG
Adh MAGPIE exon 1703608 1703858 0.821 - 0 MAGPIE_ID "dm_038_GS_dna_5" #dm_038_GS_5.02
Adh calypso tandemrepeat 1703927 1703948 . + 1 MAGPIE_CTG "dm_038" # 11 x CA
Adh MAGPIE exon 1705335 1705446 0.447 - 2 MAGPIE_ID "dm_038_GS_dna_5" #dm_038_GS_5.01
Adh MAGPIE gene 1703608 1705446 . + 0 MAGPIE_ID "dm_038_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1706383 1706422 . - 1 MAGPIE_ID "dm_038_GS_dna_5"
Adh MAGPIE promotor 1706896 1706935 . + 0 MAGPIE_ID "dm_038_GS_dna_6"
Adh calypso tandemrepeat 1709366 1709383 . + 1 MAGPIE_CTG "dm_038" # 3 x ACTCCC
Adh calypso tandemrepeat 1710698 1710717 . + 1 MAGPIE_CTG "dm_038" # 5 x TATG
Adh calypso tandemrepeat 1710698 1710717 . + 1 MAGPIE_CTG "dm_039" # 5 x TATG
Adh calypso tandemrepeat 1711879 1711900 . + 0 MAGPIE_CTG "dm_038" # 11 x GT
Adh calypso tandemrepeat 1711879 1711900 . + 0 MAGPIE_CTG "dm_039" # 11 x GT
Adh MAGPIE exon 1712203 1712349 0.371 + 0 MAGPIE_ID "dm_038_GS_dna_6" #dm_038_GS_6.01
Adh MAGPIE exon 1712203 1712349 0.512 + 0 MAGPIE_ID "dm_039_GS_dna_1" #dm_039_GS_1.01
Adh MAGPIE exon 1714442 1714585 0.179 + 1 MAGPIE_ID "dm_038_GS_dna_6" #dm_038_GS_6.02
Adh MAGPIE gene 1712203 1714585 . + 0 MAGPIE_ID "dm_038_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1714621 1714626 . + 0 MAGPIE_ID "dm_038_GS_dna_6"
Adh MAGPIE exon 1715792 1715848 0.420 + 1 MAGPIE_ID "dm_039_GS_dna_1" #dm_039_GS_1.02
Adh MAGPIE gene 1712203 1715848 . - 1 MAGPIE_ID "dm_039_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1716209 1716223 . + 1 MAGPIE_CTG "dm_039" # 15 x A
Adh MAGPIE polyA_signal 1716222 1716227 . + 2 MAGPIE_ID "dm_039_GS_dna_1"
Adh MAGPIE polyA_signal 1718400 1718405 . - 0 MAGPIE_ID "dm_039_GS_dna_2"
Adh MAGPIE exon 1718580 1718725 0.997 - 1 MAGPIE_ID "dm_039_GS_dna_2" #dm_039_GS_2.03
Adh calypso tandemrepeat 1719118 1719132 . + 0 MAGPIE_CTG "dm_039" # 3 x TCTGG
Adh MAGPIE exon 1719195 1719342 0.999 - 2 MAGPIE_ID "dm_039_GS_dna_2" #dm_039_GS_2.02
Adh MAGPIE exon 1719504 1720004 0.966 - 0 MAGPIE_ID "dm_039_GS_dna_2" #dm_039_GS_2.01
Adh MAGPIE gene 1718580 1720004 1 - 0 MAGPIE_ID "dm_039_GS_dna_2" # DE znt-3 (388 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1720414 1720453 . - 1 MAGPIE_ID "dm_039_GS_dna_2"
Adh calypso tandemrepeat 1720833 1720847 . + 2 MAGPIE_CTG "dm_039" # 5 x GCA
Adh calypso tandemrepeat 1721342 1721361 . + 1 MAGPIE_CTG "dm_039" # 5 x ACCG
Adh MAGPIE promotor 1721442 1721481 . + 2 MAGPIE_ID "dm_039_GS_dna_3"
Adh MAGPIE exon 1722555 1722656 0.573 + 2 MAGPIE_ID "dm_039_GS_dna_3" #dm_039_GS_3.01
Adh MAGPIE exon 1724226 1724372 0.608 + 2 MAGPIE_ID "dm_039_GS_dna_3" #dm_039_GS_3.02
Adh MAGPIE exon 1724802 1725017 0.965 + 2 MAGPIE_ID "dm_039_GS_dna_3" #dm_039_GS_3.03
Adh MAGPIE gene 1722555 1725017 . - 0 MAGPIE_ID "dm_039_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1725455 1725460 . + 1 MAGPIE_ID "dm_039_GS_dna_3"
Adh MAGPIE polyA_signal 1725671 1725676 . - 1 MAGPIE_ID "dm_039_GS_dna_4"
Adh MAGPIE exon 1726091 1726220 0.584 - 0 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.08
Adh MAGPIE exon 1726256 1726435 0.902 - 1 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.07
Adh calypso tandemrepeat 1728633 1728653 . + 2 MAGPIE_CTG "dm_039" # 7 x GCA
Adh calypso tandemrepeat 1728651 1728668 . + 2 MAGPIE_CTG "dm_039" # 3 x GCAACA
Adh MAGPIE exon 1728387 1728686 0.980 - 0 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.06
Adh calypso tandemrepeat 1728691 1728708 . + 0 MAGPIE_CTG "dm_039" # 3 x AACAGA
Adh MAGPIE exon 1730116 1730236 0.999 - 1 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.05
Adh MAGPIE exon 1731062 1731172 0.999 - 1 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.04
Adh calypso tandemrepeat 1731915 1731930 . + 2 MAGPIE_CTG "dm_039" # 16 x T
Adh calypso tandemrepeat 1732055 1732070 . + 1 MAGPIE_CTG "dm_039" # 4 x TGGT
Adh calypso tandemrepeat 1732939 1732956 . + 0 MAGPIE_CTG "dm_039" # 3 x ACTGCA
Adh MAGPIE exon 1732784 1732957 0.449 - 1 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.03
Adh calypso tandemrepeat 1733238 1733257 . + 2 MAGPIE_CTG "dm_039" # 20 x G
Adh MAGPIE exon 1735826 1736004 0.458 - 2 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.02
Adh MAGPIE exon 1737215 1737246 0.490 - 2 MAGPIE_ID "dm_039_GS_dna_4" #dm_039_GS_4.01
Adh MAGPIE gene 1726091 1737246 3 - 2 MAGPIE_ID "dm_039_GS_dna_4" # DE zinc transporter znt-2 - rat (359 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1737612 1737651 . - 2 MAGPIE_ID "dm_039_GS_dna_4"
Adh MAGPIE promotor 1737762 1737801 . + 2 MAGPIE_ID "dm_039_GS_dna_5"
Adh MAGPIE exon 1738791 1739218 0.960 + 2 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.01
Adh MAGPIE exon 1740300 1740540 0.997 + 2 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.02
Adh MAGPIE exon 1740659 1740939 0.999 + 1 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.03
Adh MAGPIE exon 1740995 1742042 0.951 + 1 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.04
Adh MAGPIE exon 1742104 1742446 0.998 + 0 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.05
Adh MAGPIE exon 1742886 1743193 0.996 + 2 MAGPIE_ID "dm_039_GS_dna_5" #dm_039_GS_5.06
Adh MAGPIE gene 1738791 1743193 1 - 1 MAGPIE_ID "dm_039_GS_dna_5" # DE GH08865.3prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 1743230 1743235 . + 1 MAGPIE_ID "dm_039_GS_dna_5"
Adh calypso tandemrepeat 1743287 1743301 . + 1 MAGPIE_CTG "dm_039" # 3 x GAAAA
Adh calypso tandemrepeat 1744323 1744346 . + 2 MAGPIE_CTG "dm_039" # 12 x CA
Adh MAGPIE polyA_signal 1744543 1744548 . - 2 MAGPIE_ID "dm_039_GS_dna_6"
Adh MAGPIE exon 1744620 1745915 0.997 - 0 MAGPIE_ID "dm_039_GS_dna_6" #dm_039_GS_6.01
Adh MAGPIE gene 1744620 1745915 1 - 0 MAGPIE_ID "dm_039_GS_dna_6" # DE GH08865.5prime GH EST drosophila;ST putative;TY single function;
Adh MAGPIE promotor 1746136 1746175 . - 1 MAGPIE_ID "dm_039_GS_dna_6"
Adh MAGPIE promotor 1746222 1746261 . + 2 MAGPIE_ID "dm_039_GS_dna_7"
Adh MAGPIE exon 1746303 1746349 0.999 + 2 MAGPIE_ID "dm_039_GS_dna_7" #dm_039_GS_7.01
Adh MAGPIE exon 1746401 1746842 0.999 + 1 MAGPIE_ID "dm_039_GS_dna_7" #dm_039_GS_7.02
Adh MAGPIE gene 1746303 1746842 3 - 0 MAGPIE_ID "dm_039_GS_dna_7" # DE ubiquitously transcribed tetratricopeptide repeat gene (157 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 1746916 1746921 . + 0 MAGPIE_ID "dm_039_GS_dna_7"
Adh MAGPIE polyA_signal 1746935 1746940 . - 1 MAGPIE_ID "dm_039_GS_dna_8"
Adh MAGPIE exon 1747065 1747238 0.908 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.13
Adh MAGPIE exon 1747451 1747757 0.978 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.12
Adh MAGPIE exon 1747825 1748093 0.790 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.11
Adh MAGPIE exon 1748156 1748361 0.686 - 2 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.10
Adh calypso tandemrepeat 1748374 1748393 . + 0 MAGPIE_CTG "dm_039" # 10 x AT
Adh MAGPIE exon 1748434 1748590 0.999 - 1 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.09
Adh calypso tandemrepeat 1748763 1748780 . + 2 MAGPIE_CTG "dm_039" # 6 x GCT
Adh MAGPIE exon 1748671 1748943 0.845 - 2 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.08
Adh calypso tandemrepeat 1749219 1749233 . + 2 MAGPIE_CTG "dm_039" # 3 x TTTCA
Adh calypso tandemrepeat 1750669 1750684 . + 0 MAGPIE_CTG "dm_039" # 8 x AT
Adh MAGPIE exon 1751370 1751492 0.617 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.07
Adh MAGPIE exon 1751564 1751664 0.968 - 2 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.06
Adh MAGPIE exon 1751722 1751956 0.998 - 1 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.05
Adh MAGPIE exon 1752027 1752278 0.998 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.04
Adh MAGPIE exon 1752622 1752780 0.983 - 2 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.03
Adh MAGPIE exon 1752984 1753316 0.877 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.02
Adh MAGPIE exon 1753422 1753778 0.965 - 0 MAGPIE_ID "dm_039_GS_dna_8" #dm_039_GS_8.01
Adh MAGPIE gene 1747065 1753778 3 - 0 MAGPIE_ID "dm_039_GS_dna_8" # DE NuMA protein - human (2115 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1754705 1754744 . - 0 MAGPIE_ID "dm_039_GS_dna_8"
Adh MAGPIE polyA_signal 1754894 1754899 . - 1 MAGPIE_ID "dm_039_GS_dna_9"
Adh MAGPIE polyA_signal 1755025 1755030 . - 2 MAGPIE_ID "dm_040_GS_dna_1"
Adh MAGPIE exon 1756026 1756178 0.996 - 0 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.11
Adh MAGPIE exon 1756026 1756178 0.997 - 0 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.11
Adh MAGPIE exon 1756248 1756386 0.876 - 2 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.10
Adh MAGPIE exon 1756248 1756386 0.934 - 2 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.10
Adh MAGPIE exon 1756448 1756671 0.876 - 2 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.09
Adh MAGPIE exon 1756448 1756671 0.932 - 2 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.09
Adh MAGPIE exon 1756797 1756939 0.684 - 1 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.08
Adh MAGPIE exon 1756797 1756973 0.738 - 0 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.08
Adh blastx MAGPIE_CTG "dm_040" 1757003 1757155 1e-36 - 1 similarity #>gi|4503165|ref|NP_003581.1|pCUL3| cullin 3
Adh blastx similarity 1756943 1757098 1e-58 - 1 MAGPIE_CTG "dm_039" #>gi|4503161|ref|NP_003583.1|pCUL1| cullin 1
Adh MAGPIE exon 1757005 1757119 0.538 - 1 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.07
Adh MAGPIE exon 1757182 1757352 0.663 - 2 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.06
Adh MAGPIE exon 1757182 1757352 0.960 - 2 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.07
Adh MAGPIE exon 1757415 1757585 0.999 - 0 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.05
Adh MAGPIE exon 1757415 1757585 0.999 - 0 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.06
Adh MAGPIE exon 1757648 1758409 0.916 - 1 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.04
Adh MAGPIE exon 1757648 1758856 0.665 - 1 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.05
Adh MAGPIE exon 1758473 1758856 0.528 - 1 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.03
Adh MAGPIE exon 1759026 1759629 0.756 - 2 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.02
Adh MAGPIE exon 1759026 1759629 0.789 - 2 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.04
Adh calypso tandemrepeat 1759771 1759785 . + 0 MAGPIE_CTG "dm_039" # 5 x CTC
Adh calypso tandemrepeat 1759771 1759785 . + 0 MAGPIE_CTG "dm_040" # 5 x CTC
Adh MAGPIE exon 1759760 1759938 0.193 - 2 MAGPIE_ID "dm_039_GS_dna_9" #dm_039_GS_9.01
Adh MAGPIE exon 1759760 1759938 0.850 - 2 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.03
Adh MAGPIE gene 1756026 1759938 1 - 2 MAGPIE_ID "dm_039_GS_dna_9" # DE cul-4 protein (803 aa);ST putative;TY single function;CC No exact match to Drosophila;
Adh MAGPIE exon 1760557 1760726 0.609 - 0 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.02
Adh MAGPIE exon 1762735 1762861 0.568 - 1 MAGPIE_ID "dm_040_GS_dna_1" #dm_040_GS_1.01
Adh MAGPIE gene 1756026 1762861 1 + 2 MAGPIE_ID "dm_040_GS_dna_1" # DE cul-4 protein (803 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1763769 1763808 . - 2 MAGPIE_ID "dm_040_GS_dna_1"
Adh MAGPIE polyA_signal 1763865 1763870 . - 0 MAGPIE_ID "dm_040_GS_dna_2"
Adh MAGPIE exon 1763921 1764042 0.992 - 2 MAGPIE_ID "dm_040_GS_dna_2" #dm_040_GS_2.02
Adh MAGPIE exon 1764272 1764437 0.777 - 0 MAGPIE_ID "dm_040_GS_dna_2" #dm_040_GS_2.01
Adh MAGPIE gene 1763921 1764437 2 + 1 MAGPIE_ID "dm_040_GS_dna_2" # DE 14.5 KD translational inhibitor (137 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 1764537 1764576 . - 2 MAGPIE_ID "dm_040_GS_dna_2"
Adh MAGPIE promotor 1764655 1764694 . + 0 MAGPIE_ID "dm_040_GS_dna_3"
Adh MAGPIE exon 1765474 1765626 0.276 + 0 MAGPIE_ID "dm_040_GS_dna_3" #dm_040_GS_3.01
Adh calypso tandemrepeat 1768537 1768551 . + 0 MAGPIE_CTG "dm_040" # 3 x ATTGA
Adh MAGPIE exon 1768563 1768793 0.570 + 2 MAGPIE_ID "dm_040_GS_dna_3" #dm_040_GS_3.02
Adh calypso tandemrepeat 1768850 1768864 . + 1 MAGPIE_CTG "dm_040" # 3 x GTCCC
Adh MAGPIE exon 1770133 1770552 0.361 + 0 MAGPIE_ID "dm_040_GS_dna_3" #dm_040_GS_3.03
Adh MAGPIE gene 1765474 1770552 . + 0 MAGPIE_ID "dm_040_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1770956 1770961 . + 1 MAGPIE_ID "dm_040_GS_dna_3"
Adh calypso tandemrepeat 1771355 1771369 . + 1 MAGPIE_CTG "dm_040" # 15 x A
Adh calypso tandemrepeat 1773901 1773924 . + 0 MAGPIE_CTG "dm_040" # 4 x CAACTG
Adh MAGPIE promotor 1774619 1774658 . + 1 MAGPIE_ID "dm_040_GS_dna_4"
Adh MAGPIE exon 1774679 1775557 0.920 + 1 MAGPIE_ID "dm_040_GS_dna_4" #dm_040_GS_4.01
Adh MAGPIE gene 1774679 1775557 . + 1 MAGPIE_ID "dm_040_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1775996 1776001 . + 1 MAGPIE_ID "dm_040_GS_dna_4"
Adh MAGPIE promotor 1776471 1776510 . + 2 MAGPIE_ID "dm_040_GS_dna_5"
Adh MAGPIE exon 1778386 1778793 0.964 + 0 MAGPIE_ID "dm_040_GS_dna_5" #dm_040_GS_5.01
Adh MAGPIE gene 1778386 1778793 . + 0 MAGPIE_ID "dm_040_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1779410 1779415 . + 1 MAGPIE_ID "dm_040_GS_dna_5"
Adh MAGPIE polyA_signal 1779511 1779516 . - 2 MAGPIE_ID "dm_040_GS_dna_6"
Adh MAGPIE exon 1779575 1779943 0.997 - 1 MAGPIE_ID "dm_040_GS_dna_6" #dm_040_GS_6.01
Adh MAGPIE gene 1779575 1779943 . + 1 MAGPIE_ID "dm_040_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1780104 1780143 . - 2 MAGPIE_ID "dm_040_GS_dna_6"
Adh MAGPIE polyA_signal 1780313 1780318 . - 1 MAGPIE_ID "dm_040_GS_dna_7"
Adh calypso tandemrepeat 1780460 1780477 . + 1 MAGPIE_CTG "dm_040" # 3 x CCTGCT
Adh MAGPIE exon 1780341 1780496 0.998 - 0 MAGPIE_ID "dm_040_GS_dna_7" #dm_040_GS_7.02
Adh MAGPIE exon 1781148 1781825 0.901 - 0 MAGPIE_ID "dm_040_GS_dna_7" #dm_040_GS_7.01
Adh MAGPIE gene 1780341 1781825 . + 2 MAGPIE_ID "dm_040_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1781921 1781960 . - 0 MAGPIE_ID "dm_040_GS_dna_7"
Adh MAGPIE polyA_signal 1782029 1782034 . - 1 MAGPIE_ID "dm_040_GS_dna_8"
Adh MAGPIE exon 1782412 1782827 0.516 - 0 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.07
Adh calypso tandemrepeat 1782835 1782850 . + 0 MAGPIE_CTG "dm_040" # 16 x A
Adh calypso tandemrepeat 1783221 1783244 . + 2 MAGPIE_CTG "dm_040" # 4 x GTCCCA
Adh MAGPIE exon 1783140 1783286 0.966 - 0 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.06
Adh MAGPIE exon 1783610 1783696 0.943 - 1 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.05
Adh calypso tandemrepeat 1784347 1784361 . + 0 MAGPIE_CTG "dm_040" # 3 x ATCCC
Adh MAGPIE exon 1784926 1785036 0.397 - 2 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.04
Adh MAGPIE exon 1785511 1785654 0.675 - 2 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.03
Adh MAGPIE exon 1786132 1786291 0.695 - 1 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.02
Adh MAGPIE exon 1786326 1786409 0.974 - 0 MAGPIE_ID "dm_040_GS_dna_8" #dm_040_GS_8.01
Adh MAGPIE gene 1782412 1786409 . + 0 MAGPIE_ID "dm_040_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1786523 1786562 . - 0 MAGPIE_ID "dm_040_GS_dna_8"
Adh MAGPIE promotor 1787164 1787203 . + 0 MAGPIE_ID "dm_040_GS_dna_9"
Adh MAGPIE exon 1787599 1788915 0.998 + 0 MAGPIE_ID "dm_040_GS_dna_9" #dm_040_GS_9.01
Adh MAGPIE gene 1787599 1788915 2 + 0 MAGPIE_ID "dm_040_GS_dna_9" # DE Rga (579 aa);ST putative;TY single function;CC Matches Drosophila; gene duplication?;
Adh MAGPIE polyA_signal 1789038 1789043 . + 2 MAGPIE_ID "dm_040_GS_dna_9"
Adh calypso tandemrepeat 1789748 1789765 . + 1 MAGPIE_CTG "dm_040" # 9 x AT
Adh calypso tandemrepeat 1790342 1790359 . + 1 MAGPIE_CTG "dm_040" # 3 x CCCGAT
Adh MAGPIE exon 1790556 1790699 0.676 + 2 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.01
Adh MAGPIE exon 1791967 1792111 0.720 + 0 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.02
Adh calypso tandemrepeat 1792295 1792309 . + 1 MAGPIE_CTG "dm_040" # 3 x GGATT
Adh MAGPIE exon 1792168 1792338 0.799 + 0 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.03
Adh MAGPIE exon 1794322 1794595 0.945 + 0 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.04
Adh MAGPIE exon 1794998 1795279 0.557 + 1 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.05
Adh calypso tandemrepeat 1795954 1795969 . + 0 MAGPIE_CTG "dm_040" # 8 x AT
Adh MAGPIE exon 1796220 1796322 0.407 + 2 MAGPIE_ID "dm_040_GS_dna_10" #dm_040_GS_10.06
Adh MAGPIE gene 1790556 1796322 . + 2 MAGPIE_ID "dm_040_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1796589 1796882 0.779 - 0 MAGPIE_ID "dm_040_GS_dna_11" #dm_040_GS_11.01
Adh MAGPIE gene 1796589 1796882 . + 2 MAGPIE_ID "dm_040_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1798384 1799028 0.988 - 2 MAGPIE_ID "dm_040_GS_dna_12" #dm_040_GS_12.02
Adh MAGPIE exon 1800829 1800958 0.689 + 0 MAGPIE_ID "dm_041_GS_dna_1" #dm_041_GS_1.01
Adh MAGPIE exon 1801277 1801497 0.856 + 1 MAGPIE_ID "dm_041_GS_dna_1" #dm_041_GS_1.02
Adh MAGPIE gene 1800829 1801497 . + 0 MAGPIE_ID "dm_041_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1801621 1801626 . + 0 MAGPIE_ID "dm_041_GS_dna_1"
Adh MAGPIE polyA_signal 1801701 1801706 . - 0 MAGPIE_ID "dm_041_GS_dna_2"
Adh MAGPIE exon 1802095 1802389 0.530 - 1 MAGPIE_ID "dm_041_GS_dna_2" #dm_041_GS_2.03
Adh MAGPIE exon 1802527 1802636 0.470 - 0 MAGPIE_ID "dm_041_GS_dna_2" #dm_041_GS_2.02
Adh MAGPIE exon 1804220 1804279 0.891 - 1 MAGPIE_ID "dm_041_GS_dna_2" #dm_041_GS_2.01
Adh MAGPIE exon 1804220 1804279 0.989 - 1 MAGPIE_ID "dm_040_GS_dna_12" #dm_040_GS_12.01
Adh MAGPIE gene 1798384 1804279 . + 0 MAGPIE_ID "dm_040_GS_dna_12" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 1802095 1804279 . + 0 MAGPIE_ID "dm_041_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1804395 1804434 . - 2 MAGPIE_ID "dm_041_GS_dna_2"
Adh calypso tandemrepeat 1804501 1804521 . + 0 MAGPIE_CTG "dm_040" # 7 x GCA
Adh calypso tandemrepeat 1804501 1804521 . + 0 MAGPIE_CTG "dm_041" # 7 x GCA
Adh MAGPIE polyA_signal 1804724 1804729 . - 1 MAGPIE_ID "dm_041_GS_dna_3"
Adh MAGPIE exon 1807761 1808476 0.959 - 1 MAGPIE_ID "dm_041_GS_dna_3" #dm_041_GS_3.02
Adh MAGPIE exon 1809495 1809558 0.964 - 2 MAGPIE_ID "dm_041_GS_dna_3" #dm_041_GS_3.01
Adh MAGPIE gene 1807761 1809558 3 + 2 MAGPIE_ID "dm_041_GS_dna_3" # DE transcription initiation factor partial match;ST putative;TY single function;CC Matches Drosophila; gene duplication?;
Adh calypso tandemrepeat 1809576 1809591 . + 2 MAGPIE_CTG "dm_041" # 8 x AC
Adh MAGPIE promotor 1810093 1810132 . - 1 MAGPIE_ID "dm_041_GS_dna_3"
Adh calypso tandemrepeat 1810147 1810161 . + 0 MAGPIE_CTG "dm_041" # 5 x CAT
Adh MAGPIE polyA_signal 1810532 1810537 . - 1 MAGPIE_ID "dm_041_GS_dna_4"
Adh MAGPIE exon 1810719 1811121 0.982 - 2 MAGPIE_ID "dm_041_GS_dna_4" #dm_041_GS_4.02
Adh MAGPIE exon 1811467 1811600 0.989 - 0 MAGPIE_ID "dm_041_GS_dna_4" #dm_041_GS_4.01
Adh MAGPIE gene 1810719 1811600 . + 2 MAGPIE_ID "dm_041_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1811655 1811694 . - 2 MAGPIE_ID "dm_041_GS_dna_4"
Adh MAGPIE promotor 1811757 1811796 . + 2 MAGPIE_ID "dm_041_GS_dna_5"
Adh calypso tandemrepeat 1811857 1811871 . + 0 MAGPIE_CTG "dm_041" # 5 x GAT
Adh MAGPIE exon 1811839 1811969 0.366 + 0 MAGPIE_ID "dm_041_GS_dna_5" #dm_041_GS_5.01
Adh MAGPIE exon 1814887 1815052 0.382 + 0 MAGPIE_ID "dm_041_GS_dna_5" #dm_041_GS_5.02
Adh MAGPIE exon 1816589 1816807 0.346 + 1 MAGPIE_ID "dm_041_GS_dna_5" #dm_041_GS_5.03
Adh MAGPIE gene 1811839 1816807 . + 0 MAGPIE_ID "dm_041_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1818528 1818533 . + 2 MAGPIE_ID "dm_041_GS_dna_5"
Adh calypso tandemrepeat 1819458 1819475 . + 2 MAGPIE_CTG "dm_041" # 3 x GTCCAT
Adh calypso tandemrepeat 1819551 1819565 . + 2 MAGPIE_CTG "dm_041" # 15 x T
Adh MAGPIE promotor 1823482 1823521 . + 0 MAGPIE_ID "dm_041_MP_dna_6"
Adh MAGPIE start_codon 1823746 1823748 . + 0 MAGPIE_ID "dm_041_MP_dna_6"
Adh MAGPIE CDS 1823746 1825158 . + 0 MAGPIE_ID "dm_041_MP_dna_6"
Adh MAGPIE gene 1823746 1825158 1 + 0 MAGPIE_ID "dm_041_MP_dna_6" # GN escargot;DE escargot protein (470 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 1826722 1826741 . + 0 MAGPIE_CTG "dm_041" # 4 x GAAAC
Adh MAGPIE polyA_signal 1827562 1827567 . + 0 MAGPIE_ID "dm_041_MP_dna_6"
Adh MAGPIE promotor 1827673 1827712 . + 0 MAGPIE_ID "dm_041_GS_dna_7"
Adh calypso tandemrepeat 1827715 1827729 . + 0 MAGPIE_CTG "dm_041" # 3 x TTATT
Adh MAGPIE exon 1827961 1828003 0.788 + 0 MAGPIE_ID "dm_041_GS_dna_7" #dm_041_GS_7.01
Adh MAGPIE exon 1829293 1829586 0.345 + 0 MAGPIE_ID "dm_041_GS_dna_7" #dm_041_GS_7.02
Adh MAGPIE exon 1830834 1831003 0.696 + 2 MAGPIE_ID "dm_041_GS_dna_7" #dm_041_GS_7.03
Adh MAGPIE exon 1832135 1832374 0.480 + 1 MAGPIE_ID "dm_041_GS_dna_7" #dm_041_GS_7.04
Adh MAGPIE gene 1827961 1832374 . + 0 MAGPIE_ID "dm_041_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1832840 1832845 . + 1 MAGPIE_ID "dm_041_GS_dna_7"
Adh MAGPIE polyA_signal 1833327 1833332 . - 0 MAGPIE_ID "dm_041_GS_dna_8"
Adh MAGPIE exon 1833450 1833848 0.580 - 0 MAGPIE_ID "dm_041_GS_dna_8" #dm_041_GS_8.01
Adh MAGPIE gene 1833450 1833848 . + 2 MAGPIE_ID "dm_041_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1835019 1835058 . - 2 MAGPIE_ID "dm_041_GS_dna_8"
Adh MAGPIE polyA_signal 1835624 1835629 . - 1 MAGPIE_ID "dm_041_GS_dna_9"
Adh calypso tandemrepeat 1836335 1836352 . + 1 MAGPIE_CTG "dm_041" # 3 x GCCAAT
Adh calypso tandemrepeat 1836793 1836810 . + 0 MAGPIE_CTG "dm_041" # 3 x TGGAGC
Adh MAGPIE exon 1836751 1837287 0.832 - 2 MAGPIE_ID "dm_041_GS_dna_9" #dm_041_GS_9.01
Adh MAGPIE gene 1836751 1837287 . + 0 MAGPIE_ID "dm_041_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1837499 1837513 . + 1 MAGPIE_CTG "dm_041" # 3 x ATTCG
Adh MAGPIE promotor 1838172 1838211 . - 2 MAGPIE_ID "dm_041_GS_dna_9"
Adh calypso tandemrepeat 1838248 1838265 . + 0 MAGPIE_CTG "dm_041" # 6 x TCA
Adh MAGPIE exon 1838815 1838891 0.089 - 0 MAGPIE_ID "dm_041_GS_dna_10" #dm_041_GS_10.04
Adh calypso tandemrepeat 1840936 1840956 . + 0 MAGPIE_CTG "dm_041" # 7 x GTA
Adh MAGPIE exon 1843368 1843484 0.017 - 0 MAGPIE_ID "dm_041_GS_dna_10" #dm_041_GS_10.03
Adh MAGPIE exon 1845841 1846037 0.244 + 0 MAGPIE_ID "dm_042_GS_dna_1" #dm_042_GS_1.01
Adh MAGPIE exon 1846504 1846798 0.244 + 0 MAGPIE_ID "dm_042_GS_dna_1" #dm_042_GS_1.02
Adh MAGPIE gene 1845841 1846798 . - 1 MAGPIE_ID "dm_042_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1847369 1847374 . + 1 MAGPIE_ID "dm_042_GS_dna_1"
Adh MAGPIE exon 1847276 1847427 0.179 - 2 MAGPIE_ID "dm_041_GS_dna_10" #dm_041_GS_10.02
Adh MAGPIE polyA_signal 1847484 1847489 . - 0 MAGPIE_ID "dm_042_GS_dna_2"
Adh MAGPIE exon 1848616 1848683 0.221 - 0 MAGPIE_ID "dm_041_GS_dna_10" #dm_041_GS_10.01
Adh MAGPIE gene 1838815 1848683 . + 0 MAGPIE_ID "dm_041_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1849362 1849544 0.743 - 0 MAGPIE_ID "dm_041_GS_dna_11" #dm_041_GS_11.01
Adh MAGPIE exon 1849362 1849544 0.793 - 0 MAGPIE_ID "dm_042_GS_dna_2" #dm_042_GS_2.01
Adh MAGPIE gene 1849362 1849544 . + 2 MAGPIE_ID "dm_041_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 1849362 1849544 . - 0 MAGPIE_ID "dm_042_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1850225 1850264 . - 0 MAGPIE_ID "dm_042_GS_dna_2"
Adh MAGPIE polyA_signal 1850597 1850602 . - 1 MAGPIE_ID "dm_042_GS_dna_3"
Adh MAGPIE exon 1850650 1851231 0.085 - 2 MAGPIE_ID "dm_042_GS_dna_3" #dm_042_GS_3.03
Adh MAGPIE exon 1853016 1853142 0.071 - 2 MAGPIE_ID "dm_042_GS_dna_3" #dm_042_GS_3.02
Adh calypso tandemrepeat 1853377 1853391 . + 0 MAGPIE_CTG "dm_042" # 3 x TGAAG
Adh MAGPIE exon 1856461 1856642 0.108 - 0 MAGPIE_ID "dm_042_GS_dna_3" #dm_042_GS_3.01
Adh MAGPIE gene 1850650 1856642 . - 0 MAGPIE_ID "dm_042_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1857886 1857925 . - 1 MAGPIE_ID "dm_042_GS_dna_3"
Adh MAGPIE polyA_signal 1858387 1858392 . - 2 MAGPIE_ID "dm_042_GS_dna_4"
Adh MAGPIE exon 1859931 1860443 0.953 - 0 MAGPIE_ID "dm_042_GS_dna_4" #dm_042_GS_4.03
Adh MAGPIE exon 1862723 1862866 0.758 - 1 MAGPIE_ID "dm_042_GS_dna_4" #dm_042_GS_4.02
Adh MAGPIE exon 1864125 1864184 0.900 - 0 MAGPIE_ID "dm_042_GS_dna_4" #dm_042_GS_4.01
Adh MAGPIE gene 1859931 1864184 . - 0 MAGPIE_ID "dm_042_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1864385 1864424 . - 0 MAGPIE_ID "dm_042_GS_dna_4"
Adh MAGPIE promotor 1864840 1864879 . + 0 MAGPIE_ID "dm_042_GS_dna_5"
Adh MAGPIE exon 1866720 1867217 0.897 + 2 MAGPIE_ID "dm_042_GS_dna_5" #dm_042_GS_5.01
Adh MAGPIE gene 1866720 1867217 . - 0 MAGPIE_ID "dm_042_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1867339 1867344 . + 0 MAGPIE_ID "dm_042_GS_dna_5"
Adh MAGPIE promotor 1867779 1867818 . + 2 MAGPIE_ID "dm_042_GS_dna_6"
Adh MAGPIE exon 1869237 1869411 0.612 + 2 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.01
Adh calypso tandemrepeat 1869690 1869707 . + 2 MAGPIE_CTG "dm_042" # 6 x ATC
Adh MAGPIE exon 1870003 1870144 0.545 + 0 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.02
Adh MAGPIE exon 1870178 1870251 0.544 + 1 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.03
Adh MAGPIE exon 1870375 1870560 0.891 + 0 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.04
Adh MAGPIE exon 1871336 1871557 0.623 + 1 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.05
Adh MAGPIE exon 1871587 1871681 0.989 + 0 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.06
Adh calypso tandemrepeat 1872408 1872425 . + 2 MAGPIE_CTG "dm_042" # 6 x TCA
Adh MAGPIE exon 1872374 1872481 0.975 + 1 MAGPIE_ID "dm_042_GS_dna_6" #dm_042_GS_6.07
Adh MAGPIE gene 1869237 1872481 . - 1 MAGPIE_ID "dm_042_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1873859 1873864 . + 1 MAGPIE_ID "dm_042_GS_dna_6"
Adh MAGPIE polyA_signal 1873945 1873950 . - 2 MAGPIE_ID "dm_042_GS_dna_7"
Adh calypso tandemrepeat 1875472 1875489 . + 0 MAGPIE_CTG "dm_042" # 3 x GTCTCA
Adh MAGPIE exon 1875987 1876447 0.574 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.13
Adh MAGPIE exon 1878988 1879161 0.366 - 2 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.12
Adh MAGPIE exon 1881548 1881779 0.354 - 0 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.11
Adh MAGPIE exon 1883261 1883385 0.878 - 2 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.10
Adh calypso tandemrepeat 1883451 1883465 . + 2 MAGPIE_CTG "dm_042" # 3 x TAATT
Adh MAGPIE exon 1883560 1883683 0.937 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.09
Adh MAGPIE exon 1884195 1884559 0.801 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.08
Adh MAGPIE exon 1885049 1885269 0.340 - 2 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.07
Adh MAGPIE exon 1885421 1885599 0.195 - 2 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.06
Adh MAGPIE exon 1886301 1886582 0.490 - 0 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.05
Adh MAGPIE exon 1889969 1890043 0.498 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.04
Adh MAGPIE polyA_signal 1890656 1890661 . - 1 MAGPIE_ID "dm_043_GS_dna_1"
Adh MAGPIE exon 1891293 1891508 0.293 - 0 MAGPIE_ID "dm_043_GS_dna_1" #dm_043_GS_1.05
Adh MAGPIE exon 1891514 1891654 0.312 - 1 MAGPIE_ID "dm_043_GS_dna_1" #dm_043_GS_1.04
Adh MAGPIE exon 1891514 1891654 0.945 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.03
Adh MAGPIE exon 1891981 1892047 0.314 - 1 MAGPIE_ID "dm_043_GS_dna_1" #dm_043_GS_1.03
Adh MAGPIE exon 1891981 1892047 0.944 - 1 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.02
Adh MAGPIE exon 1893271 1893751 0.200 - 1 MAGPIE_ID "dm_043_GS_dna_1" #dm_043_GS_1.02
Adh MAGPIE exon 1893271 1893815 0.611 - 0 MAGPIE_ID "dm_042_GS_dna_7" #dm_042_GS_7.01
Adh MAGPIE gene 1875987 1893815 . - 0 MAGPIE_ID "dm_042_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1895585 1895879 0.491 - 0 MAGPIE_ID "dm_043_GS_dna_1" #dm_043_GS_1.01
Adh MAGPIE gene 1891293 1895879 . - 0 MAGPIE_ID "dm_043_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1896299 1896338 . - 0 MAGPIE_ID "dm_043_GS_dna_1"
Adh MAGPIE promotor 1897044 1897083 . + 2 MAGPIE_ID "dm_043_GS_dna_2"
Adh MAGPIE exon 1897648 1897741 0.087 + 0 MAGPIE_ID "dm_043_GS_dna_2" #dm_043_GS_2.01
Adh calypso tandemrepeat 1897863 1897877 . + 2 MAGPIE_CTG "dm_043" # 5 x ATG
Adh MAGPIE exon 1898098 1898199 0.850 + 0 MAGPIE_ID "dm_043_GS_dna_2" #dm_043_GS_2.02
Adh calypso tandemrepeat 1899801 1899818 . + 2 MAGPIE_CTG "dm_043" # 6 x GAT
Adh MAGPIE exon 1899607 1899902 0.980 + 0 MAGPIE_ID "dm_043_GS_dna_2" #dm_043_GS_2.03
Adh MAGPIE gene 1897648 1899902 . - 0 MAGPIE_ID "dm_043_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1900239 1900244 . + 2 MAGPIE_ID "dm_043_GS_dna_2"
Adh MAGPIE promotor 1900406 1900445 . + 1 MAGPIE_ID "dm_043_GS_dna_3"
Adh calypso tandemrepeat 1900746 1900763 . + 2 MAGPIE_CTG "dm_043" # 3 x GCAATT
Adh MAGPIE exon 1902002 1902268 0.594 + 1 MAGPIE_ID "dm_043_GS_dna_3" #dm_043_GS_3.01
Adh MAGPIE exon 1903197 1903412 0.909 + 2 MAGPIE_ID "dm_043_GS_dna_3" #dm_043_GS_3.02
Adh MAGPIE gene 1902002 1903412 . - 0 MAGPIE_ID "dm_043_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1903844 1903849 . + 1 MAGPIE_ID "dm_043_GS_dna_3"
Adh MAGPIE promotor 1906830 1906869 . + 2 MAGPIE_ID "dm_043_GS_dna_4"
Adh MAGPIE exon 1909801 1910036 0.051 + 0 MAGPIE_ID "dm_043_GS_dna_4" #dm_043_GS_4.01
Adh MAGPIE exon 1910129 1910271 0.092 + 1 MAGPIE_ID "dm_043_GS_dna_4" #dm_043_GS_4.02
Adh calypso tandemrepeat 1910604 1910619 . + 2 MAGPIE_CTG "dm_043" # 8 x TG
Adh MAGPIE exon 1912067 1912189 0.076 + 1 MAGPIE_ID "dm_043_GS_dna_4" #dm_043_GS_4.03
Adh MAGPIE exon 1912526 1912650 0.103 + 1 MAGPIE_ID "dm_043_GS_dna_4" #dm_043_GS_4.04
Adh MAGPIE gene 1909801 1912650 . - 2 MAGPIE_ID "dm_043_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1912810 1912815 . + 0 MAGPIE_ID "dm_043_GS_dna_4"
Adh MAGPIE polyA_signal 1912971 1912976 . - 0 MAGPIE_ID "dm_043_GS_dna_5"
Adh blastx similarity 1914320 1914379 8e-29 - 1 MAGPIE_CTG "dm_043" #>gi|1731442|sp|P51508|ZN81_HUMAN ZINC FINGER PROTEIN 81
Adh MAGPIE exon 1913374 1914932 0.949 - 0 MAGPIE_ID "dm_043_GS_dna_5" #dm_043_GS_5.02
Adh MAGPIE exon 1914995 1915082 0.982 - 0 MAGPIE_ID "dm_043_GS_dna_5" #dm_043_GS_5.01
Adh MAGPIE gene 1913374 1915082 1 - 0 MAGPIE_ID "dm_043_GS_dna_5" # DE escargot protein (FLEAB (470 aa);ST putative;TY single function;CC Close, but not exact, match to Drosophila; same Drosophila protein as dm_041_GS_dna_6; gene duplication?;
Adh MAGPIE promotor 1915224 1915263 . - 2 MAGPIE_ID "dm_043_GS_dna_5"
Adh MAGPIE promotor 1916161 1916200 . + 0 MAGPIE_ID "dm_043_GS_dna_6"
Adh MAGPIE exon 1916305 1916372 0.063 + 0 MAGPIE_ID "dm_043_GS_dna_6" #dm_043_GS_6.01
Adh MAGPIE exon 1916440 1916680 0.057 + 0 MAGPIE_ID "dm_043_GS_dna_6" #dm_043_GS_6.02
Adh MAGPIE gene 1916305 1916680 . - 1 MAGPIE_ID "dm_043_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1917251 1917256 . + 1 MAGPIE_ID "dm_043_GS_dna_6"
Adh MAGPIE promotor 1917288 1917327 . + 2 MAGPIE_ID "dm_043_GS_dna_7"
Adh MAGPIE exon 1917420 1917537 0.985 + 2 MAGPIE_ID "dm_043_GS_dna_7" #dm_043_GS_7.01
Adh MAGPIE exon 1917587 1917792 0.540 + 1 MAGPIE_ID "dm_043_GS_dna_7" #dm_043_GS_7.02
Adh MAGPIE gene 1917420 1917792 . - 2 MAGPIE_ID "dm_043_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1918115 1918120 . + 1 MAGPIE_ID "dm_043_GS_dna_7"
Adh MAGPIE polyA_signal 1918228 1918233 . - 2 MAGPIE_ID "dm_043_GS_dna_8"
Adh calypso tandemrepeat 1919272 1919295 . + 0 MAGPIE_CTG "dm_043" # 8 x GAG
Adh MAGPIE exon 1919204 1919551 0.695 - 1 MAGPIE_ID "dm_043_GS_dna_8" #dm_043_GS_8.01
Adh MAGPIE gene 1919204 1919551 . - 1 MAGPIE_ID "dm_043_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1919828 1919867 . - 0 MAGPIE_ID "dm_043_GS_dna_8"
Adh MAGPIE polyA_signal 1920035 1920040 . - 1 MAGPIE_ID "dm_043_GS_dna_9"
Adh MAGPIE exon 1920382 1920612 0.642 - 2 MAGPIE_ID "dm_043_GS_dna_9" #dm_043_GS_9.01
Adh MAGPIE gene 1920382 1920612 . - 2 MAGPIE_ID "dm_043_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1921657 1921696 . - 1 MAGPIE_ID "dm_043_GS_dna_9"
Adh calypso tandemrepeat 1923052 1923068 . + 0 MAGPIE_CTG "dm_043" # 17 x A
Adh MAGPIE exon 1923109 1924563 0.568 + 0 MAGPIE_ID "dm_043_GS_dna_10" #dm_043_GS_10.01
Adh MAGPIE gene 1923109 1924563 1 - 2 MAGPIE_ID "dm_043_GS_dna_10" # DE LD26668.5prime LD EST drosophila;ST putative;TY single function;CC No exact matches.;
Adh MAGPIE exon 1925729 1925859 0.974 + 1 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.01
Adh MAGPIE exon 1926614 1926827 0.006 + 1 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.02
Adh calypso tandemrepeat 1928694 1928708 . + 2 MAGPIE_CTG "dm_043" # 15 x T
Adh MAGPIE exon 1929495 1929652 0.043 + 2 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.03
Adh MAGPIE exon 1931240 1931487 0.746 + 1 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.04
Adh MAGPIE exon 1931493 1931775 0.539 + 2 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.05
Adh calypso tandemrepeat 1933624 1933638 . + 0 MAGPIE_CTG "dm_043" # 15 x T
Adh MAGPIE exon 1933713 1934013 0.471 + 2 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.06
Adh MAGPIE exon 1935160 1935308 0.756 + 0 MAGPIE_ID "dm_044_GS_dna_1" #dm_044_GS_1.01
Adh MAGPIE gene 1935160 1935308 . - 0 MAGPIE_ID "dm_044_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1935830 1935835 . + 1 MAGPIE_ID "dm_044_GS_dna_1"
Adh MAGPIE promotor 1935849 1935888 . + 2 MAGPIE_ID "dm_044_GS_dna_2"
Adh calypso tandemrepeat 1935928 1935945 . + 0 MAGPIE_CTG "dm_043" # 9 x CT
Adh calypso tandemrepeat 1935928 1935945 . + 0 MAGPIE_CTG "dm_044" # 9 x CT
Adh reputer repeat 1935758 1936158 . + . REPEAT "52" # maximal forward repeat
Adh MAGPIE exon 1936723 1937027 0.018 + 0 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.07
Adh MAGPIE exon 1936726 1937027 0.118 + 0 MAGPIE_ID "dm_044_GS_dna_2" #dm_044_GS_2.01
Adh blastx similarity 1937623 1938615 2e-81 + 0 MAGPIE_CTG "dm_044" #>gi|2133675|pir||S70429 hypothetical protein 3 - fruit fly (Drosophila melanogaster) retrotransposon mgd1
Adh MAGPIE exon 1937664 1938775 0.065 + 2 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.08
Adh MAGPIE exon 1937664 1938775 0.073 + 2 MAGPIE_ID "dm_044_GS_dna_2" #dm_044_GS_2.02
Adh MAGPIE exon 1939045 1939772 0.562 + 0 MAGPIE_ID "dm_043_GS_dna_11" #dm_043_GS_11.09
Adh MAGPIE gene 1925729 1939772 1 - 0 MAGPIE_ID "dm_043_GS_dna_11" # DE SD09466.5prime SD EST drosophila;ST putative;TY single function;CC Exact match to EST.;
Adh blastx similarity 1938933 1940000 e-121 + 2 MAGPIE_CTG "dm_043" #>gi|2133676|pir||S70430 hypothetical protein 4 - fruit fly (Drosophila melanogaster) retrotransposon mgd1
Adh MAGPIE exon 1939045 1941879 0.667 + 0 MAGPIE_ID "dm_044_GS_dna_2" #dm_044_GS_2.03
Adh blastx similarity 1938933 1942466 0.0 + 2 MAGPIE_CTG "dm_044" #>gi|2133676|pir||S70430 hypothetical protein 4 - fruit fly (Drosophila melanogaster) retrotransposon mgd1
Adh calypso tandemrepeat 1942940 1942957 . + 1 MAGPIE_CTG "dm_044" # 9 x CT
Adh reputer repeat 1942770 1943170 . + . REPEAT "52" # maximal forward repeat
Adh calypso tandemrepeat 1946191 1946208 . + 0 MAGPIE_CTG "dm_044" # 6 x TTA
Adh MAGPIE exon 1947254 1947663 0.451 + 1 MAGPIE_ID "dm_044_GS_dna_2" #dm_044_GS_2.04
Adh MAGPIE gene 1936726 1947663 1 - 2 MAGPIE_ID "dm_044_GS_dna_2" # DE retrovirus-related POL (1237 aa);ST putative;TY single function;CC transposon?;
Adh MAGPIE polyA_signal 1947718 1947723 . + 0 MAGPIE_ID "dm_044_GS_dna_2"
Adh MAGPIE polyA_signal 1948039 1948044 . - 2 MAGPIE_ID "dm_044_GS_dna_3"
Adh MAGPIE exon 1948793 1949045 0.965 - 0 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.09
Adh calypso tandemrepeat 1949060 1949077 . + 1 MAGPIE_CTG "dm_044" # 3 x AGACCC
Adh calypso tandemrepeat 1949721 1949738 . + 2 MAGPIE_CTG "dm_044" # 3 x GATACA
Adh MAGPIE exon 1950020 1950200 0.290 - 0 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.08
Adh MAGPIE exon 1950829 1951201 0.412 - 1 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.07
Adh calypso tandemrepeat 1952050 1952064 . + 0 MAGPIE_CTG "dm_044" # 3 x GAGCT
Adh MAGPIE exon 1952711 1952818 0.270 - 1 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.06
Adh MAGPIE exon 1953776 1953872 0.196 - 0 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.05
Adh MAGPIE exon 1955898 1956010 0.298 - 1 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.04
Adh MAGPIE exon 1957828 1957936 0.417 - 1 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.03
Adh calypso tandemrepeat 1958417 1958431 . + 1 MAGPIE_CTG "dm_044" # 5 x CAA
Adh MAGPIE exon 1958206 1958462 0.047 - 0 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.02
Adh MAGPIE exon 1959464 1959538 0.064 - 1 MAGPIE_ID "dm_044_GS_dna_3" #dm_044_GS_3.01
Adh MAGPIE gene 1948793 1959538 . - 1 MAGPIE_ID "dm_044_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 1959897 1959936 . - 2 MAGPIE_ID "dm_044_GS_dna_3"
Adh calypso tandemrepeat 1961718 1961733 . + 2 MAGPIE_CTG "dm_044" # 8 x TA
Adh MAGPIE promotor 1962428 1962467 . + 1 MAGPIE_ID "dm_044_GS_dna_4"
Adh MAGPIE exon 1962736 1962865 0.216 + 0 MAGPIE_ID "dm_044_GS_dna_4" #dm_044_GS_4.01
Adh calypso tandemrepeat 1963456 1963470 . + 0 MAGPIE_CTG "dm_044" # 3 x ATGCG
Adh MAGPIE exon 1963353 1963651 0.012 + 2 MAGPIE_ID "dm_044_GS_dna_4" #dm_044_GS_4.02
Adh MAGPIE gene 1962736 1963651 . - 1 MAGPIE_ID "dm_044_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 1963928 1963951 . + 1 MAGPIE_CTG "dm_044" # 8 x TCC
Adh MAGPIE polyA_signal 1964239 1964244 . + 0 MAGPIE_ID "dm_044_GS_dna_4"
Adh MAGPIE polyA_signal 1964282 1964287 . - 1 MAGPIE_ID "dm_044_MP_dna_5"
Adh MAGPIE CDS 1966586 1967758 . - 1 MAGPIE_ID "dm_044_MP_dna_5"
Adh MAGPIE gene 1966586 1967758 1 - 1 MAGPIE_ID "dm_044_MP_dna_5" # DE snail protein (390 aa);ST putative;TY single function;
Adh MAGPIE start_codon 1967756 1967758 . - 1 MAGPIE_ID "dm_044_MP_dna_5"
Adh MAGPIE promotor 1967902 1967941 . - 1 MAGPIE_ID "dm_044_MP_dna_5"
Adh calypso tandemrepeat 1968103 1968120 . + 0 MAGPIE_CTG "dm_044" # 9 x CT
Adh MAGPIE promotor 1970375 1970414 . + 1 MAGPIE_ID "dm_044_GS_dna_6"
Adh MAGPIE exon 1970460 1970641 0.742 + 2 MAGPIE_ID "dm_044_GS_dna_6" #dm_044_GS_6.01
Adh MAGPIE exon 1971063 1971186 0.455 + 2 MAGPIE_ID "dm_044_GS_dna_6" #dm_044_GS_6.02
Adh MAGPIE gene 1970460 1971186 . - 2 MAGPIE_ID "dm_044_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1971272 1971277 . + 1 MAGPIE_ID "dm_044_GS_dna_6"
Adh MAGPIE promotor 1971419 1971458 . + 1 MAGPIE_ID "dm_044_GS_dna_7"
Adh calypso tandemrepeat 1971709 1971723 . + 0 MAGPIE_CTG "dm_044" # 15 x A
Adh MAGPIE exon 1974488 1974989 0.148 + 1 MAGPIE_ID "dm_044_GS_dna_7" #dm_044_GS_7.01
Adh MAGPIE exon 1975334 1975484 0.108 + 1 MAGPIE_ID "dm_044_GS_dna_7" #dm_044_GS_7.02
Adh MAGPIE exon 1975874 1976154 0.081 + 1 MAGPIE_ID "dm_044_GS_dna_7" #dm_044_GS_7.03
Adh MAGPIE exon 1977628 1977740 0.902 + 0 MAGPIE_ID "dm_044_GS_dna_7" #dm_044_GS_7.04
Adh MAGPIE gene 1974488 1977740 1 - 0 MAGPIE_ID "dm_044_GS_dna_7" # DE protein translocase (172 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh calypso tandemrepeat 1978481 1978498 . + 1 MAGPIE_CTG "dm_044" # 3 x AATGCA
Adh MAGPIE polyA_signal 1979678 1979683 . + 1 MAGPIE_ID "dm_044_GS_dna_7"
Adh MAGPIE polyA_signal 1979813 1979818 . - 1 MAGPIE_ID "dm_044_GS_dna_8"
Adh MAGPIE exon 1980081 1980310 0.739 + 2 MAGPIE_ID "dm_045_GS_dna_1" #dm_045_GS_1.01
Adh MAGPIE exon 1980249 1980381 0.247 - 2 MAGPIE_ID "dm_044_GS_dna_8" #dm_044_GS_8.04
Adh MAGPIE exon 1980457 1980517 0.459 + 0 MAGPIE_ID "dm_045_GS_dna_1" #dm_045_GS_1.02
Adh MAGPIE exon 1981929 1982084 0.116 - 0 MAGPIE_ID "dm_044_GS_dna_8" #dm_044_GS_8.03
Adh MAGPIE exon 1983033 1983207 0.219 - 2 MAGPIE_ID "dm_044_GS_dna_8" #dm_044_GS_8.02
Adh MAGPIE exon 1983142 1983399 0.418 + 0 MAGPIE_ID "dm_045_GS_dna_1" #dm_045_GS_1.03
Adh MAGPIE exon 1983628 1983855 0.572 + 0 MAGPIE_ID "dm_045_GS_dna_1" #dm_045_GS_1.04
Adh MAGPIE gene 1980081 1983855 . + 2 MAGPIE_ID "dm_045_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 1983782 1983907 0.549 - 1 MAGPIE_ID "dm_044_GS_dna_8" #dm_044_GS_8.01
Adh MAGPIE gene 1980249 1983907 . - 1 MAGPIE_ID "dm_044_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1983999 1984004 . + 2 MAGPIE_ID "dm_045_GS_dna_1"
Adh MAGPIE promotor 1984370 1984409 . + 1 MAGPIE_ID "dm_045_GS_dna_2"
Adh MAGPIE exon 1985108 1985452 0.993 + 1 MAGPIE_ID "dm_045_GS_dna_2" #dm_045_GS_2.01
Adh MAGPIE gene 1985108 1985452 . + 1 MAGPIE_ID "dm_045_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1985760 1985765 . + 2 MAGPIE_ID "dm_045_GS_dna_2"
Adh MAGPIE promotor 1986387 1986426 . + 2 MAGPIE_ID "dm_045_GS_dna_3"
Adh MAGPIE exon 1987051 1987153 0.795 + 0 MAGPIE_ID "dm_045_GS_dna_3" #dm_045_GS_3.01
Adh MAGPIE exon 1987691 1987986 0.682 + 1 MAGPIE_ID "dm_045_GS_dna_3" #dm_045_GS_3.02
Adh MAGPIE gene 1987051 1987986 . + 0 MAGPIE_ID "dm_045_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 1988014 1988019 . + 0 MAGPIE_ID "dm_045_GS_dna_3"
Adh MAGPIE promotor 1988342 1988381 . + 1 MAGPIE_ID "dm_045_GS_dna_4"
Adh MAGPIE exon 1988872 1989075 0.731 + 0 MAGPIE_ID "dm_045_GS_dna_4" #dm_045_GS_4.01
Adh MAGPIE exon 1991768 1992877 0.970 + 1 MAGPIE_ID "dm_045_GS_dna_4" #dm_045_GS_4.02
Adh MAGPIE exon 1992942 1993204 0.830 + 2 MAGPIE_ID "dm_045_GS_dna_4" #dm_045_GS_4.03
Adh MAGPIE exon 1993350 1993566 0.986 + 2 MAGPIE_ID "dm_045_GS_dna_4" #dm_045_GS_4.04
Adh MAGPIE gene 1988872 1993566 1 + 0 MAGPIE_ID "dm_045_GS_dna_4" # DE serine c-palmitoyltransferase (561 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 1994196 1994201 . + 2 MAGPIE_ID "dm_045_GS_dna_4"
Adh MAGPIE promotor 1994641 1994680 . + 0 MAGPIE_ID "dm_045_GS_dna_5"
Adh MAGPIE exon 1995750 1996122 0.986 + 2 MAGPIE_ID "dm_045_GS_dna_5" #dm_045_GS_5.01
Adh MAGPIE exon 2000098 2000438 0.609 + 0 MAGPIE_ID "dm_045_GS_dna_5" #dm_045_GS_5.02
Adh MAGPIE gene 1995750 2000438 . + 2 MAGPIE_ID "dm_045_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2000968 2000973 . + 0 MAGPIE_ID "dm_045_GS_dna_5"
Adh MAGPIE polyA_signal 2001000 2001005 . - 0 MAGPIE_ID "dm_045_GS_dna_6"
Adh MAGPIE exon 2001387 2001686 0.033 - 0 MAGPIE_ID "dm_045_GS_dna_6" #dm_045_GS_6.04
Adh MAGPIE exon 2002501 2002806 0.034 - 2 MAGPIE_ID "dm_045_GS_dna_6" #dm_045_GS_6.03
Adh calypso tandemrepeat 2006358 2006381 . + 2 MAGPIE_CTG "dm_045" # 12 x CA
Adh MAGPIE exon 2007824 2008036 0.741 - 1 MAGPIE_ID "dm_045_GS_dna_6" #dm_045_GS_6.02
Adh MAGPIE exon 2008083 2008175 0.625 - 0 MAGPIE_ID "dm_045_GS_dna_6" #dm_045_GS_6.01
Adh MAGPIE gene 2001387 2008175 . + 2 MAGPIE_ID "dm_045_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2010379 2010418 . - 1 MAGPIE_ID "dm_045_GS_dna_6"
Adh calypso tandemrepeat 2010735 2010749 . + 2 MAGPIE_CTG "dm_045" # 15 x A
Adh MAGPIE promotor 2010769 2010808 . + 0 MAGPIE_ID "dm_045_GS_dna_7"
Adh MAGPIE exon 2010810 2010834 0.475 + 2 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.01
Adh MAGPIE exon 2011611 2011726 0.077 + 2 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.02
Adh MAGPIE exon 2015244 2015444 0.041 + 2 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.03
Adh calypso tandemrepeat 2016529 2016545 . + 0 MAGPIE_CTG "dm_045" # 17 x A
Adh MAGPIE exon 2016806 2016940 0.011 + 1 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.04
Adh MAGPIE exon 2019576 2019731 0.000 + 2 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.05
Adh calypso tandemrepeat 2020365 2020384 . + 2 MAGPIE_CTG "dm_045" # 20 x T
Adh MAGPIE exon 2022700 2022936 0.000 + 0 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.06
Adh MAGPIE exon 2024273 2024336 0.002 + 1 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.07
Adh calypso tandemrepeat 2025530 2025544 . + 1 MAGPIE_CTG "dm_045" # 3 x CATTT
Adh calypso tandemrepeat 2025530 2025544 . + 1 MAGPIE_CTG "dm_046" # 3 x CATTT
Adh MAGPIE exon 2025937 2026182 0.124 + 0 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.08
Adh MAGPIE exon 2025937 2026182 0.791 + 0 MAGPIE_ID "dm_046_GS_dna_1" #dm_046_GS_1.01
Adh MAGPIE exon 2027143 2027277 0.060 + 0 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.09
Adh MAGPIE exon 2027143 2027277 0.361 + 0 MAGPIE_ID "dm_046_GS_dna_1" #dm_046_GS_1.02
Adh MAGPIE exon 2028707 2028807 0.095 + 1 MAGPIE_ID "dm_045_GS_dna_7" #dm_045_GS_7.10
Adh MAGPIE gene 2010810 2028807 . + 2 MAGPIE_ID "dm_045_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2028920 2028937 . + 1 MAGPIE_CTG "dm_045" # 9 x AT
Adh calypso tandemrepeat 2028920 2028937 . + 1 MAGPIE_CTG "dm_046" # 9 x AT
Adh MAGPIE polyA_signal 2029331 2029336 . + 1 MAGPIE_ID "dm_045_GS_dna_7"
Adh MAGPIE exon 2031388 2031577 0.186 + 0 MAGPIE_ID "dm_046_GS_dna_1" #dm_046_GS_1.03
Adh MAGPIE exon 2031644 2031725 0.322 + 1 MAGPIE_ID "dm_046_GS_dna_1" #dm_046_GS_1.04
Adh MAGPIE exon 2031902 2032078 0.409 + 1 MAGPIE_ID "dm_046_GS_dna_1" #dm_046_GS_1.05
Adh MAGPIE gene 2025937 2032078 . + 0 MAGPIE_ID "dm_046_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2032612 2032617 . + 0 MAGPIE_ID "dm_046_GS_dna_1"
Adh MAGPIE promotor 2033560 2033599 . + 0 MAGPIE_ID "dm_046_GS_dna_2"
Adh MAGPIE exon 2035641 2035825 0.787 + 2 MAGPIE_ID "dm_046_GS_dna_2" #dm_046_GS_2.01
Adh MAGPIE exon 2037369 2037672 0.922 + 2 MAGPIE_ID "dm_046_GS_dna_2" #dm_046_GS_2.02
Adh MAGPIE gene 2035641 2037672 . + 2 MAGPIE_ID "dm_046_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2037872 2037877 . + 1 MAGPIE_ID "dm_046_GS_dna_2"
Adh MAGPIE promotor 2038194 2038233 . + 2 MAGPIE_ID "dm_046_GS_dna_3"
Adh MAGPIE exon 2039153 2039293 0.547 + 1 MAGPIE_ID "dm_046_GS_dna_3" #dm_046_GS_3.01
Adh MAGPIE gene 2039153 2039293 . + 1 MAGPIE_ID "dm_046_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2039324 2039329 . + 1 MAGPIE_ID "dm_046_GS_dna_3"
Adh MAGPIE promotor 2039648 2039687 . + 1 MAGPIE_ID "dm_046_GS_dna_4"
Adh MAGPIE exon 2040123 2040280 0.993 + 2 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.01
Adh MAGPIE exon 2040432 2040689 0.985 + 2 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.02
Adh MAGPIE exon 2041374 2041494 0.703 + 2 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.03
Adh calypso tandemrepeat 2042609 2042624 . + 1 MAGPIE_CTG "dm_046" # 4 x AAAT
Adh calypso tandemrepeat 2044384 2044398 . + 0 MAGPIE_CTG "dm_046" # 5 x GCA
Adh MAGPIE exon 2044388 2044681 0.603 + 1 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.04
Adh MAGPIE exon 2049236 2049415 0.671 + 1 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.05
Adh MAGPIE exon 2050204 2050341 0.867 + 0 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.06
Adh MAGPIE exon 2052716 2052901 0.571 + 1 MAGPIE_ID "dm_046_GS_dna_4" #dm_046_GS_4.07
Adh MAGPIE gene 2040123 2052901 . + 2 MAGPIE_ID "dm_046_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2053297 2053302 . + 0 MAGPIE_ID "dm_046_GS_dna_4"
Adh MAGPIE promotor 2055068 2055107 . + 1 MAGPIE_ID "dm_046_GS_dna_5"
Adh MAGPIE exon 2055713 2055775 0.151 + 1 MAGPIE_ID "dm_046_GS_dna_5" #dm_046_GS_5.01
Adh MAGPIE exon 2055855 2055959 0.112 + 2 MAGPIE_ID "dm_046_GS_dna_5" #dm_046_GS_5.02
Adh calypso tandemrepeat 2057669 2057683 . + 1 MAGPIE_CTG "dm_046" # 3 x CGTTT
Adh MAGPIE exon 2058541 2058766 0.088 + 0 MAGPIE_ID "dm_046_GS_dna_5" #dm_046_GS_5.03
Adh MAGPIE exon 2059326 2059444 0.544 + 2 MAGPIE_ID "dm_046_GS_dna_5" #dm_046_GS_5.04
Adh MAGPIE gene 2055713 2059444 . + 1 MAGPIE_ID "dm_046_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2059698 2059703 . + 2 MAGPIE_ID "dm_046_GS_dna_5"
Adh MAGPIE polyA_signal 2060152 2060157 . - 2 MAGPIE_ID "dm_046_GS_dna_6"
Adh MAGPIE exon 2062307 2062735 0.539 - 1 MAGPIE_ID "dm_046_GS_dna_6" #dm_046_GS_6.01
Adh MAGPIE gene 2062307 2062735 . + 1 MAGPIE_ID "dm_046_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2063954 2063993 . - 0 MAGPIE_ID "dm_046_GS_dna_6"
Adh calypso tandemrepeat 2064384 2064398 . + 2 MAGPIE_CTG "dm_046" # 3 x ATATT
Adh MAGPIE promotor 2067389 2067428 . + 1 MAGPIE_ID "dm_046_GS_dna_7"
Adh MAGPIE exon 2068604 2070501 0.735 + 1 MAGPIE_ID "dm_046_GS_dna_7" #dm_046_GS_7.01
Adh MAGPIE exon 2070077 2070501 0.999 + 1 MAGPIE_ID "dm_047_GS_dna_1" #dm_047_GS_1.01
Adh MAGPIE exon 2070692 2070988 0.794 + 1 MAGPIE_ID "dm_046_GS_dna_7" #dm_046_GS_7.02
Adh MAGPIE exon 2070692 2070988 0.795 + 1 MAGPIE_ID "dm_047_GS_dna_1" #dm_047_GS_1.02
Adh MAGPIE exon 2071510 2072677 0.839 + 0 MAGPIE_ID "dm_046_GS_dna_7" #dm_046_GS_7.03
Adh MAGPIE exon 2071510 2072677 0.840 + 0 MAGPIE_ID "dm_047_GS_dna_1" #dm_047_GS_1.03
Adh MAGPIE gene 2068604 2072677 1 + 1 MAGPIE_ID "dm_046_GS_dna_7" # DE KEK1 (880 aa);ST putative;TY single function;CC Matches Drosophila, but not exact;
Adh MAGPIE gene 2070077 2072677 1 + 1 MAGPIE_ID "dm_047_GS_dna_1" # DE GH14053.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2073289 2073294 . + 0 MAGPIE_ID "dm_046_GS_dna_7"
Adh MAGPIE polyA_signal 2073289 2073294 . + 0 MAGPIE_ID "dm_047_GS_dna_1"
Adh MAGPIE promotor 2074561 2074600 . + 0 MAGPIE_ID "dm_046_GS_dna_8"
Adh MAGPIE promotor 2074561 2074600 . + 0 MAGPIE_ID "dm_047_GS_dna_2"
Adh MAGPIE exon 2074709 2074983 0.845 + 1 MAGPIE_ID "dm_047_GS_dna_2" #dm_047_GS_2.01
Adh MAGPIE exon 2074709 2074983 0.938 + 1 MAGPIE_ID "dm_046_GS_dna_8" #dm_046_GS_8.01
Adh MAGPIE gene 2074709 2074983 . + 1 MAGPIE_ID "dm_046_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 2075435 2075690 0.813 + 1 MAGPIE_ID "dm_047_GS_dna_2" #dm_047_GS_2.02
Adh MAGPIE gene 2074709 2075690 . + 1 MAGPIE_ID "dm_047_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2075807 2075812 . + 1 MAGPIE_ID "dm_047_GS_dna_2"
Adh MAGPIE promotor 2076107 2076146 . + 1 MAGPIE_ID "dm_047_MP_dna_3"
Adh reputer repeat 2076111 2076356 . + . REPEAT "130" # maximal palindromic repeat
Adh reputer repeat 2076116 2076356 . + . REPEAT "112" # maximal palindromic repeat
Adh reputer repeat 2076116 2076529 . + . REPEAT "19" # maximal forward repeat
Adh reputer repeat 2076354 2076529 . + . REPEAT "102" # maximal palindromic repeat
Adh reputer repeat 2076354 2076566 . + . REPEAT "101" # maximal palindromic repeat
Adh reputer repeat 2076560 2076818 . + . REPEAT "99" # maximal palindromic repeat
Adh reputer repeat 2076813 2076942 . + . REPEAT "98" # maximal palindromic repeat
Adh reputer repeat 2076944 2076997 . + . REPEAT "118" # maximal palindromic repeat
Adh reputer repeat 2076999 2077465 . + . REPEAT "125" # maximal palindromic repeat
Adh blastx similarity 2076918 2078159 0.0 + 2 MAGPIE_CTG "dm_047" #>gi|120795|sp|P20828|GAG2_DROME RETROVIRUS-RELATED GAG POLYPROTEIN (TRANSPOSON 297)
Adh reputer repeat 2077467 2078275 . + . REPEAT "115" # maximal palindromic repeat
Adh reputer repeat 2078277 2078898 . + . REPEAT "128" # maximal palindromic repeat
Adh reputer repeat 2078900 2080316 . + . REPEAT "126" # maximal palindromic repeat
Adh MAGPIE CDS 2078114 2081293 . + 1 MAGPIE_ID "dm_047_MP_dna_3"
Adh MAGPIE gene 2078114 2081293 1 + 1 MAGPIE_ID "dm_047_MP_dna_3" # GN 297 element;DE transposon 297 (1059 aa);ST putative;TY single function;CC Look at FlyBase entry. Additional copy at dm_58_GS_dna_9.;
Adh blastx similarity 2081214 2081342 0.0 + 2 MAGPIE_CTG "dm_047" #>gi|422418|pir||S34639 pol protein - fruit fly (Drosophila ananassae)
Adh reputer repeat 2080318 2081387 . + . REPEAT "132" # maximal palindromic repeat
Adh reputer repeat 2081389 2082239 . + . REPEAT "117" # maximal palindromic repeat
Adh reputer repeat 2082241 2082444 . + . REPEAT "116" # maximal palindromic repeat
Adh blastx similarity 2081260 2082672 0.0 + 0 MAGPIE_CTG "dm_047" #>gi|119381|sp|P20829|ENV2_DROME RETROVIRUS-RELATED ENV POLYPROTEIN (TRANSPOSON 297)
Adh reputer repeat 2082446 2082937 . + . REPEAT "143" # maximal palindromic repeat
Adh reputer repeat 2082697 2082937 . + . REPEAT "113" # maximal palindromic repeat
Adh reputer repeat 2082697 2083110 . + . REPEAT "19" # maximal forward repeat
Adh reputer repeat 2082935 2083110 . + . REPEAT "103" # maximal palindromic repeat
Adh reputer repeat 2082935 2083116 . + . REPEAT "100" # maximal palindromic repeat
Adh calypso tandemrepeat 2084139 2084153 . + 2 MAGPIE_CTG "dm_047" # 3 x GTATA
Adh calypso tandemrepeat 2085093 2085110 . + 2 MAGPIE_CTG "dm_047" # 9 x TA
Adh calypso tandemrepeat 2087717 2087731 . + 1 MAGPIE_CTG "dm_047" # 15 x T
Adh calypso tandemrepeat 2089161 2089175 . + 2 MAGPIE_CTG "dm_047" # 3 x CATTT
Adh calypso tandemrepeat 2089530 2089547 . + 2 MAGPIE_CTG "dm_047" # 3 x CAACAT
Adh MAGPIE polyA_signal 2091221 2091226 . + 1 MAGPIE_ID "dm_047_MP_dna_3"
Adh MAGPIE polyA_signal 2092408 2092413 . - 2 MAGPIE_ID "dm_047_GS_dna_4"
Adh MAGPIE exon 2093540 2093709 0.555 - 2 MAGPIE_ID "dm_047_GS_dna_4" #dm_047_GS_4.03
Adh MAGPIE exon 2094086 2094189 0.610 - 2 MAGPIE_ID "dm_047_GS_dna_4" #dm_047_GS_4.02
Adh MAGPIE exon 2096121 2096206 0.899 - 1 MAGPIE_ID "dm_047_GS_dna_4" #dm_047_GS_4.01
Adh MAGPIE gene 2093540 2096206 . + 1 MAGPIE_ID "dm_047_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2097553 2097592 . - 1 MAGPIE_ID "dm_047_GS_dna_4"
Adh calypso tandemrepeat 2097990 2098011 . + 2 MAGPIE_CTG "dm_047" # 11 x TG
Adh calypso tandemrepeat 2098669 2098686 . + 0 MAGPIE_CTG "dm_047" # 9 x TC
Adh MAGPIE polyA_signal 2099149 2099154 . - 2 MAGPIE_ID "dm_047_GS_dna_5"
Adh MAGPIE exon 2100551 2101336 0.998 - 1 MAGPIE_ID "dm_047_GS_dna_5" #dm_047_GS_5.01
Adh MAGPIE gene 2100551 2101336 1 + 1 MAGPIE_ID "dm_047_GS_dna_5" # DE meprin beta chain precursor - m (704 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 2101612 2101651 . - 1 MAGPIE_ID "dm_047_GS_dna_5"
Adh MAGPIE polyA_signal 2102111 2102116 . - 1 MAGPIE_ID "dm_047_GS_dna_6"
Adh MAGPIE exon 2102169 2102752 0.986 - 1 MAGPIE_ID "dm_047_GS_dna_6" #dm_047_GS_6.04
Adh MAGPIE exon 2102776 2102965 0.901 - 1 MAGPIE_ID "dm_047_GS_dna_6" #dm_047_GS_6.03
Adh MAGPIE exon 2103628 2104169 0.968 - 0 MAGPIE_ID "dm_047_GS_dna_6" #dm_047_GS_6.02
Adh blastx similarity 2103634 2104395 2e-22 - 2 MAGPIE_CTG "dm_047" #>gi|1345615|sp|P98069|BMPH_STRPU BONE MORPHOGENETIC PROTEIN 1 HOMOLOG
Adh MAGPIE exon 2104226 2104442 0.857 - 0 MAGPIE_ID "dm_047_GS_dna_6" #dm_047_GS_6.01
Adh MAGPIE gene 2102169 2104442 1 + 2 MAGPIE_ID "dm_047_GS_dna_6" # DE meprin beta chain precursor - m (704 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 2104494 2104533 . - 2 MAGPIE_ID "dm_047_GS_dna_6"
Adh MAGPIE polyA_signal 2104813 2104818 . - 2 MAGPIE_ID "dm_047_GS_dna_7"
Adh MAGPIE exon 2105170 2105720 0.996 - 0 MAGPIE_ID "dm_047_GS_dna_7" #dm_047_GS_7.02
Adh MAGPIE exon 2105774 2105984 0.973 - 0 MAGPIE_ID "dm_047_GS_dna_7" #dm_047_GS_7.01
Adh MAGPIE gene 2105170 2105984 1 + 0 MAGPIE_ID "dm_047_GS_dna_7" # DE PMP1 protein;ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 2106289 2106328 . - 1 MAGPIE_ID "dm_047_GS_dna_7"
Adh MAGPIE promotor 2106605 2106644 . + 1 MAGPIE_ID "dm_047_GS_dna_8"
Adh MAGPIE exon 2106653 2106860 0.998 + 1 MAGPIE_ID "dm_047_GS_dna_8" #dm_047_GS_8.01
Adh MAGPIE exon 2106931 2107445 0.975 + 0 MAGPIE_ID "dm_047_GS_dna_8" #dm_047_GS_8.02
Adh MAGPIE gene 2106653 2107445 1 + 1 MAGPIE_ID "dm_047_GS_dna_8" # DE meprin A beta-subunit (700 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE polyA_signal 2107506 2107511 . + 2 MAGPIE_ID "dm_047_GS_dna_8"
Adh MAGPIE polyA_signal 2108485 2108490 . - 2 MAGPIE_ID "dm_047_GS_dna_9"
Adh MAGPIE exon 2109315 2109407 0.366 - 0 MAGPIE_ID "dm_047_GS_dna_9" #dm_047_GS_9.03
Adh calypso tandemrepeat 2111586 2111601 . + 2 MAGPIE_CTG "dm_047" # 8 x CA
Adh MAGPIE exon 2111897 2112079 0.875 - 1 MAGPIE_ID "dm_047_GS_dna_9" #dm_047_GS_9.02
Adh MAGPIE exon 2112328 2113209 0.991 - 2 MAGPIE_ID "dm_047_GS_dna_9" #dm_047_GS_9.01
Adh MAGPIE gene 2109315 2113209 . + 2 MAGPIE_ID "dm_047_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2113224 2113263 . - 2 MAGPIE_ID "dm_047_GS_dna_9"
Adh MAGPIE exon 2114455 2114669 0.594 + 0 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.01
Adh MAGPIE exon 2115066 2115211 0.416 + 2 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.02
Adh MAGPIE exon 2115477 2115648 0.447 + 2 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.03
Adh MAGPIE exon 2115477 2115648 0.473 + 2 MAGPIE_ID "dm_048_GS_dna_1" #dm_048_GS_1.01
Adh MAGPIE exon 2117129 2117276 0.122 + 1 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.04
Adh MAGPIE exon 2117129 2117276 0.146 + 1 MAGPIE_ID "dm_048_GS_dna_1" #dm_048_GS_1.02
Adh calypso tandemrepeat 2118089 2118103 . + 1 MAGPIE_CTG "dm_047" # 15 x T
Adh calypso tandemrepeat 2118089 2118103 . + 1 MAGPIE_CTG "dm_048" # 15 x T
Adh MAGPIE exon 2118356 2118551 0.146 + 1 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.05
Adh MAGPIE exon 2118356 2118551 0.180 + 1 MAGPIE_ID "dm_048_GS_dna_1" #dm_048_GS_1.03
Adh MAGPIE exon 2118614 2119161 0.965 + 1 MAGPIE_ID "dm_048_GS_dna_1" #dm_048_GS_1.04
Adh MAGPIE exon 2118614 2119161 0.974 + 1 MAGPIE_ID "dm_047_GS_dna_10" #dm_047_GS_10.06
Adh MAGPIE gene 2114455 2119161 1 + 0 MAGPIE_ID "dm_047_GS_dna_10" # DE meprin A beta-subunit (700 aa);ST putative;TY single function;CC No exact matches;
Adh MAGPIE gene 2115477 2119161 1 + 2 MAGPIE_ID "dm_048_GS_dna_1" # DE meprin A beta-subunit (700 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2119169 2119174 . + 1 MAGPIE_ID "dm_048_GS_dna_1"
Adh MAGPIE promotor 2119187 2119226 . + 1 MAGPIE_ID "dm_048_GS_dna_2"
Adh MAGPIE exon 2119703 2119938 0.998 - 2 MAGPIE_ID "dm_047_GS_dna_11" #dm_047_GS_11.01
Adh MAGPIE gene 2119703 2119938 . + 1 MAGPIE_ID "dm_047_GS_dna_11" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 2119874 2120025 0.936 + 1 MAGPIE_ID "dm_048_GS_dna_2" #dm_048_GS_2.01
Adh MAGPIE exon 2120092 2120194 0.993 + 0 MAGPIE_ID "dm_048_GS_dna_2" #dm_048_GS_2.02
Adh MAGPIE exon 2120312 2121269 0.997 + 1 MAGPIE_ID "dm_048_GS_dna_2" #dm_048_GS_2.03
Adh MAGPIE exon 2121336 2121745 0.997 + 2 MAGPIE_ID "dm_048_GS_dna_2" #dm_048_GS_2.04
Adh MAGPIE gene 2119874 2121745 2 + 1 MAGPIE_ID "dm_048_GS_dna_2" # DE slit protein - Drosophila (1529 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2122249 2122254 . + 0 MAGPIE_ID "dm_048_GS_dna_2"
Adh calypso tandemrepeat 2123067 2123082 . + 2 MAGPIE_CTG "dm_048" # 4 x CTAT
Adh MAGPIE promotor 2125416 2125455 . + 2 MAGPIE_ID "dm_048_GS_dna_3"
Adh MAGPIE exon 2125843 2125928 0.488 + 0 MAGPIE_ID "dm_048_GS_dna_3" #dm_048_GS_3.01
Adh MAGPIE exon 2127418 2127538 0.994 + 0 MAGPIE_ID "dm_048_GS_dna_3" #dm_048_GS_3.02
Adh MAGPIE exon 2128068 2128196 0.997 + 2 MAGPIE_ID "dm_048_GS_dna_3" #dm_048_GS_3.03
Adh calypso tandemrepeat 2128235 2128252 . + 1 MAGPIE_CTG "dm_048" # 6 x CAG
Adh MAGPIE exon 2128698 2128886 0.876 + 2 MAGPIE_ID "dm_048_GS_dna_3" #dm_048_GS_3.04
Adh MAGPIE gene 2125843 2128886 . + 0 MAGPIE_ID "dm_048_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2129936 2129941 . + 1 MAGPIE_ID "dm_048_GS_dna_3"
Adh MAGPIE polyA_signal 2130083 2130088 . - 1 MAGPIE_ID "dm_048_GS_dna_4"
Adh MAGPIE exon 2130327 2130434 0.574 - 0 MAGPIE_ID "dm_048_GS_dna_4" #dm_048_GS_4.02
Adh MAGPIE exon 2131207 2131281 0.760 - 2 MAGPIE_ID "dm_048_GS_dna_4" #dm_048_GS_4.01
Adh MAGPIE gene 2130327 2131281 . + 2 MAGPIE_ID "dm_048_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2136317 2136356 . - 0 MAGPIE_ID "dm_048_GS_dna_4"
Adh MAGPIE polyA_signal 2136592 2136597 . - 2 MAGPIE_ID "dm_048_GS_dna_5"
Adh MAGPIE exon 2137486 2137679 0.998 - 0 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.13
Adh MAGPIE exon 2137746 2137902 0.958 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.12
Adh MAGPIE exon 2137961 2138116 0.996 - 1 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.11
Adh MAGPIE exon 2138186 2138671 0.997 - 1 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.10
Adh MAGPIE exon 2138733 2138994 0.994 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.09
Adh MAGPIE exon 2139065 2139169 0.998 - 1 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.08
Adh MAGPIE exon 2139824 2140056 0.987 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.07
Adh MAGPIE exon 2140199 2140353 0.619 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.06
Adh MAGPIE exon 2140417 2140630 0.982 - 1 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.05
Adh MAGPIE exon 2140705 2141412 0.965 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.04
Adh MAGPIE exon 2141468 2141749 0.990 - 1 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.03
Adh calypso tandemrepeat 2141813 2141827 . + 1 MAGPIE_CTG "dm_048" # 3 x ATAAA
Adh MAGPIE exon 2141998 2142471 0.659 - 2 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.02
Adh calypso tandemrepeat 2144259 2144274 . + 2 MAGPIE_CTG "dm_048" # 16 x A
Adh calypso tandemrepeat 2144485 2144502 . + 0 MAGPIE_CTG "dm_048" # 3 x GTATGG
Adh calypso tandemrepeat 2144514 2144531 . + 2 MAGPIE_CTG "dm_048" # 3 x GGTCTG
Adh calypso tandemrepeat 2146666 2146680 . + 0 MAGPIE_CTG "dm_048" # 3 x GATGC
Adh calypso tandemrepeat 2146796 2146813 . + 1 MAGPIE_CTG "dm_048" # 3 x GCAGGG
Adh MAGPIE exon 2146632 2146973 0.910 - 0 MAGPIE_ID "dm_048_GS_dna_5" #dm_048_GS_5.01
Adh MAGPIE gene 2137486 2146973 1 + 0 MAGPIE_ID "dm_048_GS_dna_5" # DE calcium channel alpha (1091 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE promotor 2147018 2147057 . - 0 MAGPIE_ID "dm_048_GS_dna_5"
Adh MAGPIE promotor 2148210 2148249 . + 2 MAGPIE_ID "dm_048_GS_dna_6"
Adh MAGPIE exon 2149283 2149510 0.474 + 1 MAGPIE_ID "dm_048_GS_dna_6" #dm_048_GS_6.01
Adh MAGPIE exon 2149741 2150907 0.917 + 0 MAGPIE_ID "dm_048_GS_dna_6" #dm_048_GS_6.02
Adh MAGPIE gene 2149283 2150907 1 + 1 MAGPIE_ID "dm_048_GS_dna_6" # DE trypsin-like serine protease (384 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2150941 2150946 . + 0 MAGPIE_ID "dm_048_GS_dna_6"
Adh MAGPIE polyA_signal 2150966 2150971 . - 1 MAGPIE_ID "dm_048_GS_dna_7"
Adh MAGPIE exon 2151008 2151505 0.557 - 1 MAGPIE_ID "dm_048_GS_dna_7" #dm_048_GS_7.03
Adh MAGPIE exon 2151821 2151931 0.556 - 1 MAGPIE_ID "dm_048_GS_dna_7" #dm_048_GS_7.02
Adh MAGPIE exon 2152628 2152645 0.671 - 1 MAGPIE_ID "dm_048_GS_dna_7" #dm_048_GS_7.01
Adh MAGPIE gene 2151008 2152645 . + 1 MAGPIE_ID "dm_048_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2153180 2153219 . - 0 MAGPIE_ID "dm_048_GS_dna_7"
Adh MAGPIE promotor 2153627 2153666 . + 1 MAGPIE_ID "dm_048_GS_dna_8"
Adh calypso tandemrepeat 2154241 2154261 . + 0 MAGPIE_CTG "dm_048" # 7 x CAG
Adh MAGPIE exon 2154039 2154363 0.448 + 2 MAGPIE_ID "dm_048_GS_dna_8" #dm_048_GS_8.01
Adh MAGPIE exon 2155824 2155921 0.782 + 2 MAGPIE_ID "dm_048_GS_dna_8" #dm_048_GS_8.02
Adh MAGPIE gene 2154039 2155921 . + 2 MAGPIE_ID "dm_048_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2156571 2156576 . + 2 MAGPIE_ID "dm_048_GS_dna_8"
Adh MAGPIE promotor 2158180 2158219 . + 0 MAGPIE_ID "dm_048_GS_dna_9"
Adh MAGPIE exon 2158476 2158559 0.454 + 2 MAGPIE_ID "dm_048_GS_dna_9" #dm_048_GS_9.01
Adh MAGPIE exon 2158660 2159460 0.406 + 0 MAGPIE_ID "dm_048_GS_dna_9" #dm_048_GS_9.02
Adh MAGPIE gene 2158476 2159460 1 + 2 MAGPIE_ID "dm_048_GS_dna_9" # DE limulus factor D;ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2159655 2159660 . + 2 MAGPIE_ID "dm_048_GS_dna_9"
Adh calypso tandemrepeat 2159937 2159962 . + 2 MAGPIE_CTG "dm_048" # 13 x CA
Adh calypso tandemrepeat 2160363 2160377 . + 2 MAGPIE_CTG "dm_048" # 3 x ATATT
Adh calypso tandemrepeat 2160363 2160377 . + 2 MAGPIE_CTG "dm_049" # 3 x ATATT
Adh MAGPIE exon 2160686 2160794 0.678 + 1 MAGPIE_ID "dm_049_GS_dna_1" #dm_049_GS_1.01
Adh MAGPIE gene 2160686 2160794 . - 0 MAGPIE_ID "dm_049_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2161145 2161150 . + 1 MAGPIE_ID "dm_049_GS_dna_1"
Adh calypso tandemrepeat 2162285 2162300 . + 1 MAGPIE_CTG "dm_048" # 4 x TCGC
Adh calypso tandemrepeat 2162285 2162300 . + 1 MAGPIE_CTG "dm_049" # 4 x TCGC
Adh calypso tandemrepeat 2163052 2163069 . + 0 MAGPIE_CTG "dm_048" # 9 x AC
Adh calypso tandemrepeat 2163052 2163069 . + 0 MAGPIE_CTG "dm_049" # 9 x AC
Adh MAGPIE polyA_signal 2163167 2163172 . - 1 MAGPIE_ID "dm_049_GS_dna_2"
Adh MAGPIE exon 2163892 2164224 0.821 - 2 MAGPIE_ID "dm_048_GS_dna_10" #dm_048_GS_10.01
Adh MAGPIE exon 2163892 2164224 0.897 - 2 MAGPIE_ID "dm_049_GS_dna_2" #dm_049_GS_2.01
Adh MAGPIE gene 2163892 2164224 . - 2 MAGPIE_ID "dm_049_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2163892 2164224 1 + 0 MAGPIE_ID "dm_048_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2164379 2164418 . - 0 MAGPIE_ID "dm_049_GS_dna_2"
Adh MAGPIE promotor 2164506 2164545 . + 2 MAGPIE_ID "dm_049_GS_dna_3"
Adh MAGPIE exon 2165286 2165451 0.168 + 2 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.01
Adh calypso tandemrepeat 2168181 2168200 . + 2 MAGPIE_CTG "dm_049" # 10 x AT
Adh calypso tandemrepeat 2168525 2168542 . + 1 MAGPIE_CTG "dm_049" # 3 x CTCGAA
Adh MAGPIE exon 2168497 2168693 0.076 + 0 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.02
Adh calypso tandemrepeat 2168789 2168808 . + 1 MAGPIE_CTG "dm_049" # 5 x AAGA
Adh calypso tandemrepeat 2168860 2168877 . + 0 MAGPIE_CTG "dm_049" # 3 x CCCCCT
Adh MAGPIE exon 2168764 2168898 0.368 + 0 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.03
Adh MAGPIE exon 2168982 2169076 0.211 + 2 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.04
Adh calypso tandemrepeat 2169754 2169771 . + 0 MAGPIE_CTG "dm_049" # 9 x CA
Adh calypso tandemrepeat 2170312 2170326 . + 0 MAGPIE_CTG "dm_049" # 3 x AAAAT
Adh calypso tandemrepeat 2170345 2170360 . + 0 MAGPIE_CTG "dm_049" # 8 x CA
Adh calypso tandemrepeat 2170565 2170582 . + 1 MAGPIE_CTG "dm_049" # 3 x TGTGAG
Adh MAGPIE exon 2171041 2171227 0.491 + 0 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.05
Adh MAGPIE exon 2172305 2172463 0.617 + 1 MAGPIE_ID "dm_049_GS_dna_3" #dm_049_GS_3.06
Adh MAGPIE gene 2165286 2172463 . - 1 MAGPIE_ID "dm_049_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2172631 2172636 . + 0 MAGPIE_ID "dm_049_GS_dna_3"
Adh reputer repeat 2172020 2172678 . + . REPEAT "16" # maximal forward repeat
Adh MAGPIE promotor 2173017 2173056 . + 2 MAGPIE_ID "dm_049_GS_dna_4"
Adh blastx similarity 2173107 2173901 4e-57 + 2 MAGPIE_CTG "dm_049" #>gi|3493213 (AF056940) gag [Drosophila virilis]
Adh MAGPIE exon 2173083 2173905 0.702 + 2 MAGPIE_ID "dm_049_GS_dna_4" #dm_049_GS_4.01
Adh blastx similarity 2173884 2174009 0.0 + 2 MAGPIE_CTG "dm_049" #>gi|3493214 (AF056940) pol polyprotein [Drosophila virilis]
Adh MAGPIE exon 2174301 2177240 0.356 + 2 MAGPIE_ID "dm_049_GS_dna_4" #dm_049_GS_4.02
Adh MAGPIE exon 2177608 2177853 0.275 + 0 MAGPIE_ID "dm_049_GS_dna_4" #dm_049_GS_4.03
Adh blastx similarity 2177295 2178596 e-137 + 2 MAGPIE_CTG "dm_049" #>gi|4165195|emb|CAA08808| (AJ009736) envelope protein
Adh MAGPIE exon 2179000 2179181 0.455 + 0 MAGPIE_ID "dm_049_GS_dna_4" #dm_049_GS_4.04
Adh MAGPIE gene 2173083 2179181 1 - 0 MAGPIE_ID "dm_049_GS_dna_4" # DE Pol protein;ST putative;TY single function;CC transposon?;
Adh MAGPIE polyA_signal 2179349 2179354 . + 1 MAGPIE_ID "dm_049_GS_dna_4"
Adh reputer repeat 2178738 2179396 . + . REPEAT "16" # maximal forward repeat
Adh MAGPIE polyA_signal 2179400 2179405 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh calypso tandemrepeat 2180401 2180416 . + 0 MAGPIE_CTG "dm_049" # 8 x TA
Adh MAGPIE CDS 2180707 2180982 . - 2 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE splice5 2180982 2180983 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE splice3 2181099 2181100 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE CDS 2181100 2181325 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE splice5 2181325 2181326 . - 0 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE splice3 2181391 2181392 . - 0 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE stop_codon 2182496 2182498 . - 1 MAGPIE_ID "dm_049_MP_dna_8a" #
Adh MAGPIE CDS 2181392 2182662 . - 2 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE CDS 2182496 2182662 . - 2 MAGPIE_ID "dm_049_MP_dna_8a" # cyclin E type II [Drosophila melanogaster]
Adh MAGPIE splice5 2182662 2182663 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE splice3 2182827 2182828 . - 1 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE CDS 2182828 2182863 . - 2 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE gene 2180707 2182863 1 - 2 MAGPIE_ID "dm_049_MP_dna_5" # GN Cyclin E;DE G1/S-SPECIFIC cyclin E (601 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 2182861 2182863 . - 2 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE promotor 2183307 2183346 . - 2 MAGPIE_ID "dm_049_MP_dna_5"
Adh MAGPIE polyA_signal 2183360 2183365 . - 1 MAGPIE_ID "dm_049_GS_dna_6"
Adh calypso tandemrepeat 2183371 2183385 . + 0 MAGPIE_CTG "dm_049" # 5 x GTT
Adh MAGPIE exon 2183542 2183946 0.807 - 2 MAGPIE_ID "dm_049_GS_dna_6" #dm_049_GS_6.01
Adh MAGPIE gene 2183542 2183946 . - 2 MAGPIE_ID "dm_049_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2184571 2184610 . - 1 MAGPIE_ID "dm_049_GS_dna_6"
Adh MAGPIE promotor 2184707 2184746 . + 1 MAGPIE_ID "dm_049_GS_dna_7"
Adh calypso tandemrepeat 2185062 2185076 . + 2 MAGPIE_CTG "dm_049" # 15 x T
Adh calypso tandemrepeat 2185203 2185220 . + 2 MAGPIE_CTG "dm_049" # 3 x AATGAA
Adh MAGPIE exon 2185415 2185492 0.898 + 1 MAGPIE_ID "dm_049_GS_dna_7" #dm_049_GS_7.01
Adh MAGPIE exon 2185631 2186020 0.251 + 1 MAGPIE_ID "dm_049_GS_dna_7" #dm_049_GS_7.02
Adh MAGPIE exon 2188469 2188849 0.184 + 1 MAGPIE_ID "dm_049_GS_dna_7" #dm_049_GS_7.03
Adh MAGPIE gene 2185415 2188849 3 - 1 MAGPIE_ID "dm_049_GS_dna_7" # DE SD04844.5prime SD EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2188872 2188877 . + 2 MAGPIE_ID "dm_049_GS_dna_7"
Adh MAGPIE promotor 2189223 2189262 . + 2 MAGPIE_ID "dm_049_GS_dna_8"
Adh MAGPIE CDS 2189454 2189790 . - 2 MAGPIE_ID "dm_049_MP_dna_8a" # cyclin E type II [Drosophila melanogaster]
Adh MAGPIE exon 2189643 2189802 0.504 + 2 MAGPIE_ID "dm_049_GS_dna_8" #dm_049_GS_8.01
Adh calypso tandemrepeat 2190034 2190048 . + 0 MAGPIE_CTG "dm_049" # 15 x T
Adh calypso tandemrepeat 2190264 2190281 . + 2 MAGPIE_CTG "dm_049" # 3 x GGAAAT
Adh MAGPIE exon 2190117 2190290 0.026 + 2 MAGPIE_ID "dm_049_GS_dna_8" #dm_049_GS_8.02
Adh calypso tandemrepeat 2191532 2191555 . + 1 MAGPIE_CTG "dm_049" # 8 x TGA
Adh calypso tandemrepeat 2192530 2192544 . + 0 MAGPIE_CTG "dm_049" # 3 x AAATT
Adh MAGPIE CDS 2192598 2192617 . - 1 MAGPIE_ID "dm_049_MP_dna_8a" # cyclin E type II [Drosophila melanogaster]
Adh MAGPIE gene 2182496 2192617 . - 1 MAGPIE_ID "dm_049_MP_dna_8a" # cyclin E type II [Drosophila melanogaster]
Adh MAGPIE start_codon 2192615 2192617 . - 1 MAGPIE_ID "dm_049_MP_dna_8a" #
Adh MAGPIE exon 2197287 2197386 0.791 + 2 MAGPIE_ID "dm_049_GS_dna_8" #dm_049_GS_8.03
Adh calypso tandemrepeat 2198374 2198388 . + 0 MAGPIE_CTG "dm_049" # 5 x TCG
Adh MAGPIE exon 2198345 2198735 0.841 + 1 MAGPIE_ID "dm_049_GS_dna_8" #dm_049_GS_8.04
Adh MAGPIE gene 2189643 2198735 2 - 0 MAGPIE_ID "dm_049_GS_dna_8" # DE cyclin E type II - fruit fly (Dr (173 aa);ST putative;TY single function;CC Small, exact match to initial exon(s);
Adh MAGPIE polyA_signal 2198903 2198908 . + 1 MAGPIE_ID "dm_049_GS_dna_8"
Adh MAGPIE polyA_signal 2199029 2199034 . - 1 MAGPIE_ID "dm_049_GS_dna_9"
Adh MAGPIE exon 2199247 2199422 0.769 - 0 MAGPIE_ID "dm_049_GS_dna_9" #dm_049_GS_9.02
Adh MAGPIE exon 2199618 2199651 0.725 - 2 MAGPIE_ID "dm_049_GS_dna_9" #dm_049_GS_9.01
Adh MAGPIE gene 2199247 2199651 . - 2 MAGPIE_ID "dm_049_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2200681 2200720 . - 1 MAGPIE_ID "dm_049_GS_dna_9"
Adh MAGPIE exon 2201531 2201677 0.984 - 1 MAGPIE_ID "dm_049_GS_dna_10" #dm_049_GS_10.03
Adh MAGPIE exon 2202376 2202477 0.877 - 2 MAGPIE_ID "dm_049_GS_dna_10" #dm_049_GS_10.02
Adh MAGPIE exon 2202548 2202802 0.852 - 1 MAGPIE_ID "dm_049_GS_dna_10" #dm_049_GS_10.01
Adh MAGPIE gene 2201531 2202802 1 - 1 MAGPIE_ID "dm_049_GS_dna_10" # DE LP07005.5prime LP EST drosophila;ST putative;TY single function;CC Exact match to EST;
Adh MAGPIE exon 2204183 2205278 0.999 + 1 MAGPIE_ID "dm_049_GS_dna_11" #dm_049_GS_11.01
Adh MAGPIE exon 2205170 2205278 0.725 + 1 MAGPIE_ID "dm_050_GS_dna_1" #dm_050_GS_1.01
Adh MAGPIE exon 2205332 2207403 0.998 + 1 MAGPIE_ID "dm_049_GS_dna_11" #dm_049_GS_11.02
Adh MAGPIE exon 2205332 2207403 0.998 + 1 MAGPIE_ID "dm_050_GS_dna_1" #dm_050_GS_1.02
Adh MAGPIE gene 2204183 2207403 1 - 2 MAGPIE_ID "dm_049_GS_dna_11" # DE LD40261.5prime LD EST drosophila;ST putative;TY single function;CC Exact match to EST ;
Adh MAGPIE gene 2205170 2207403 1 - 2 MAGPIE_ID "dm_050_GS_dna_1" # DE hypothetical protein K - human (1045 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2207685 2207690 . + 2 MAGPIE_ID "dm_050_GS_dna_1"
Adh MAGPIE polyA_signal 2207742 2207747 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE stop_codon 2208922 2208924 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE CDS 2208922 2209531 . - 1 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE exon 2208922 2209531 0.995 - 1 MAGPIE_ID "dm_049_GS_dna_12" #dm_049_GS_12.02
Adh MAGPIE splice5 2209531 2209532 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice3 2209592 2209593 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE exon 2209593 2209876 0.938 - 1 MAGPIE_ID "dm_049_GS_dna_12" #dm_049_GS_12.01
Adh MAGPIE gene 2208922 2209876 1 - 1 MAGPIE_ID "dm_049_GS_dna_12" # DE drosophila melanogaster gliotactin;ST putative;TY single function;CC For completely annotated version see dm_050_GS_dna_2;
Adh MAGPIE CDS 2209593 2209904 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice5 2209904 2209905 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice3 2209966 2209967 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE CDS 2209967 2211186 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice5 2211186 2211187 . - 1 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice3 2211242 2211243 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE CDS 2211243 2211671 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice5 2211671 2211672 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice3 2212035 2212036 . - 1 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE CDS 2212036 2212168 . - 1 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice5 2212168 2212169 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE splice3 2212227 2212228 . - 1 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE CDS 2212228 2212394 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE gene 2208922 2212394 1 - 0 MAGPIE_ID "dm_050_MP_dna_2" # GN gliotactin;DE gliotactin precursor - fruit fly (956 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 2212392 2212394 . - 0 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE promotor 2213220 2213259 . - 2 MAGPIE_ID "dm_050_MP_dna_2"
Adh MAGPIE promotor 2213266 2213305 . + 0 MAGPIE_ID "dm_050_GS_dna_3"
Adh MAGPIE exon 2214270 2214423 0.396 + 2 MAGPIE_ID "dm_050_GS_dna_3" #dm_050_GS_3.01
Adh calypso tandemrepeat 2214823 2214837 . + 0 MAGPIE_CTG "dm_050" # 5 x AAT
Adh calypso tandemrepeat 2214859 2214876 . + 0 MAGPIE_CTG "dm_050" # 6 x AAT
Adh calypso tandemrepeat 2215406 2215437 . + 1 MAGPIE_CTG "dm_050" # 8 x GATG
Adh MAGPIE exon 2215392 2215516 0.476 + 2 MAGPIE_ID "dm_050_GS_dna_3" #dm_050_GS_3.02
Adh MAGPIE gene 2214270 2215516 3 - 1 MAGPIE_ID "dm_050_GS_dna_3" # DE hypothetical 6.1 KD PR (52 aa);ST putative;TY single function;CC Matches tiny repetitive motif in C. elegans;
Adh calypso tandemrepeat 2215825 2215845 . + 0 MAGPIE_CTG "dm_050" # 7 x TAA
Adh calypso tandemrepeat 2215861 2215875 . + 0 MAGPIE_CTG "dm_050" # 5 x TAA
Adh MAGPIE polyA_signal 2215895 2215900 . + 1 MAGPIE_ID "dm_050_GS_dna_3"
Adh MAGPIE promotor 2216151 2216190 . + 2 MAGPIE_ID "dm_050_GS_dna_4"
Adh MAGPIE exon 2216202 2216447 0.960 + 2 MAGPIE_ID "dm_050_GS_dna_4" #dm_050_GS_4.01
Adh MAGPIE exon 2216609 2217034 0.999 + 1 MAGPIE_ID "dm_050_GS_dna_4" #dm_050_GS_4.02
Adh MAGPIE exon 2217099 2217419 0.837 + 2 MAGPIE_ID "dm_050_GS_dna_4" #dm_050_GS_4.03
Adh MAGPIE gene 2216202 2217419 1 - 0 MAGPIE_ID "dm_050_GS_dna_4" # DE hypothetical 37.8 KD P (333 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2217927 2217932 . + 2 MAGPIE_ID "dm_050_GS_dna_4"
Adh MAGPIE polyA_signal 2218041 2218046 . - 0 MAGPIE_ID "dm_050_GS_dna_5"
Adh blastx similarity 2218488 2218544 5e-24 - 0 MAGPIE_CTG "dm_050" #>gi|4514561|dbj|BAA75468.1| (AB024005) KRAB-containing zinc-finger
Adh MAGPIE exon 2218555 2218905 0.989 - 2 MAGPIE_ID "dm_050_GS_dna_5" #dm_050_GS_5.02
Adh MAGPIE exon 2218966 2220057 0.989 - 2 MAGPIE_ID "dm_050_GS_dna_5" #dm_050_GS_5.01
Adh MAGPIE gene 2218555 2220057 1 - 2 MAGPIE_ID "dm_050_GS_dna_5" # DE HKL1 - human (605 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE promotor 2220392 2220431 . - 0 MAGPIE_ID "dm_050_GS_dna_5"
Adh MAGPIE polyA_signal 2220476 2220481 . - 1 MAGPIE_ID "dm_050_GS_dna_6"
Adh MAGPIE exon 2220565 2222197 0.999 - 1 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.08
Adh MAGPIE exon 2222257 2222379 0.999 - 2 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.07
Adh MAGPIE exon 2222435 2222667 0.998 - 2 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.06
Adh MAGPIE exon 2222723 2222818 0.400 - 1 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.05
Adh MAGPIE exon 2223403 2223577 0.936 - 1 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.04
Adh MAGPIE exon 2223854 2224248 0.539 - 2 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.03
Adh MAGPIE exon 2226895 2227046 0.092 - 0 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.02
Adh calypso tandemrepeat 2230139 2230156 . + 1 MAGPIE_CTG "dm_050" # 9 x AC
Adh calypso tandemrepeat 2230365 2230382 . + 2 MAGPIE_CTG "dm_050" # 9 x GT
Adh calypso tandemrepeat 2231181 2231198 . + 2 MAGPIE_CTG "dm_050" # 6 x TCA
Adh MAGPIE exon 2231935 2232091 0.062 - 1 MAGPIE_ID "dm_050_GS_dna_6" #dm_050_GS_6.01
Adh MAGPIE gene 2220565 2232091 2 - 1 MAGPIE_ID "dm_050_GS_dna_6" # DE human Ku80 autoa (726 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh calypso tandemrepeat 2232468 2232482 . + 2 MAGPIE_CTG "dm_050" # 3 x ACAAA
Adh MAGPIE promotor 2232714 2232753 . - 2 MAGPIE_ID "dm_050_GS_dna_6"
Adh calypso tandemrepeat 2234024 2234038 . + 1 MAGPIE_CTG "dm_050" # 15 x T
Adh MAGPIE promotor 2235147 2235186 . + 2 MAGPIE_ID "dm_050_GS_dna_7"
Adh MAGPIE exon 2236081 2241876 0.964 + 0 MAGPIE_ID "dm_050_GS_dna_7" #dm_050_GS_7.01
Adh MAGPIE gene 2236081 2241876 . - 2 MAGPIE_ID "dm_050_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2241970 2241975 . + 0 MAGPIE_ID "dm_050_GS_dna_7"
Adh MAGPIE polyA_signal 2242027 2242032 . - 2 MAGPIE_ID "dm_050_GS_dna_8"
Adh MAGPIE exon 2242582 2242790 0.326 - 0 MAGPIE_ID "dm_050_GS_dna_8" #dm_050_GS_8.04
Adh calypso tandemrepeat 2242794 2242816 . + 2 MAGPIE_CTG "dm_050" # 23 x A
Adh MAGPIE exon 2242955 2243099 0.546 - 0 MAGPIE_ID "dm_050_GS_dna_8" #dm_050_GS_8.03
Adh MAGPIE exon 2243851 2243957 0.788 - 0 MAGPIE_ID "dm_050_GS_dna_8" #dm_050_GS_8.02
Adh MAGPIE exon 2246761 2246878 0.875 - 1 MAGPIE_ID "dm_050_GS_dna_8" #dm_050_GS_8.01
Adh MAGPIE gene 2242582 2246878 . - 1 MAGPIE_ID "dm_050_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2246899 2246938 . - 1 MAGPIE_ID "dm_050_GS_dna_8"
Adh MAGPIE polyA_signal 2247682 2247687 . - 2 MAGPIE_ID "dm_050_GS_dna_9"
Adh calypso tandemrepeat 2248183 2248197 . + 0 MAGPIE_CTG "dm_050" # 5 x TGA
Adh MAGPIE exon 2248133 2248224 0.939 - 2 MAGPIE_ID "dm_050_GS_dna_9" #dm_050_GS_9.02
Adh MAGPIE exon 2252604 2252769 0.062 - 2 MAGPIE_ID "dm_050_GS_dna_9" #dm_050_GS_9.01
Adh MAGPIE gene 2248133 2252769 . - 2 MAGPIE_ID "dm_050_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 2254301 2254361 0.891 + 1 MAGPIE_ID "dm_051_GS_dna_1" #dm_051_GS_1.01
Adh MAGPIE exon 2255069 2255172 0.603 + 1 MAGPIE_ID "dm_051_GS_dna_1" #dm_051_GS_1.02
Adh MAGPIE exon 2255810 2255944 0.703 + 1 MAGPIE_ID "dm_051_GS_dna_1" #dm_051_GS_1.03
Adh MAGPIE exon 2256861 2257041 0.840 + 2 MAGPIE_ID "dm_051_GS_dna_1" #dm_051_GS_1.04
Adh MAGPIE exon 2257795 2257955 0.932 + 0 MAGPIE_ID "dm_051_GS_dna_1" #dm_051_GS_1.05
Adh MAGPIE gene 2254301 2257955 . - 0 MAGPIE_ID "dm_051_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2259253 2259258 . + 0 MAGPIE_ID "dm_051_GS_dna_1"
Adh MAGPIE polyA_signal 2259377 2259382 . - 1 MAGPIE_ID "dm_051_GS_dna_2"
Adh calypso tandemrepeat 2259378 2259392 . + 2 MAGPIE_CTG "dm_051" # 5 x TTA
Adh MAGPIE exon 2259512 2259735 0.877 - 2 MAGPIE_ID "dm_051_GS_dna_2" #dm_051_GS_2.02
Adh MAGPIE exon 2260159 2260306 0.902 - 1 MAGPIE_ID "dm_051_GS_dna_2" #dm_051_GS_2.01
Adh MAGPIE gene 2259512 2260306 . - 1 MAGPIE_ID "dm_051_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2262245 2262284 . - 0 MAGPIE_ID "dm_051_GS_dna_2"
Adh MAGPIE polyA_signal 2262802 2262807 . - 2 MAGPIE_ID "dm_051_GS_dna_3"
Adh MAGPIE exon 2263166 2263696 0.888 - 1 MAGPIE_ID "dm_051_GS_dna_3" #dm_051_GS_3.02
Adh MAGPIE exon 2263755 2263955 0.420 - 0 MAGPIE_ID "dm_051_GS_dna_3" #dm_051_GS_3.01
Adh MAGPIE gene 2263166 2263955 3 - 0 MAGPIE_ID "dm_051_GS_dna_3" # DE sericin MG-2 - greater wax moth (286 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE promotor 2264081 2264120 . - 0 MAGPIE_ID "dm_051_GS_dna_3"
Adh MAGPIE promotor 2265832 2265871 . + 0 MAGPIE_ID "dm_051_GS_dna_4"
Adh MAGPIE exon 2266649 2266718 0.877 + 1 MAGPIE_ID "dm_051_GS_dna_4" #dm_051_GS_4.01
Adh MAGPIE exon 2267137 2267283 0.745 + 0 MAGPIE_ID "dm_051_GS_dna_4" #dm_051_GS_4.02
Adh calypso tandemrepeat 2267417 2267434 . + 1 MAGPIE_CTG "dm_051" # 9 x AT
Adh MAGPIE exon 2267749 2267922 0.774 + 0 MAGPIE_ID "dm_051_GS_dna_4" #dm_051_GS_4.03
Adh MAGPIE exon 2270150 2270319 0.567 + 1 MAGPIE_ID "dm_051_GS_dna_4" #dm_051_GS_4.04
Adh MAGPIE gene 2266649 2270319 . - 2 MAGPIE_ID "dm_051_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2270784 2270789 . + 2 MAGPIE_ID "dm_051_GS_dna_4"
Adh MAGPIE promotor 2275552 2275591 . + 0 MAGPIE_ID "dm_051_GS_dna_5"
Adh calypso tandemrepeat 2277326 2277340 . + 1 MAGPIE_CTG "dm_051" # 5 x AGC
Adh MAGPIE exon 2277254 2277546 0.564 + 1 MAGPIE_ID "dm_051_GS_dna_5" #dm_051_GS_5.01
Adh MAGPIE exon 2278064 2278212 0.851 + 1 MAGPIE_ID "dm_051_GS_dna_5" #dm_051_GS_5.02
Adh MAGPIE exon 2279357 2279653 0.792 + 1 MAGPIE_ID "dm_051_GS_dna_5" #dm_051_GS_5.03
Adh calypso tandemrepeat 2279921 2279936 . + 1 MAGPIE_CTG "dm_051" # 4 x AATA
Adh blastx similarity 2279955 2280185 3e-28 + 2 MAGPIE_CTG "dm_051" #>gi|227733|prf||1710151B transposable element MDG1 ORF76
Adh calypso tandemrepeat 2280187 2280208 . + 0 MAGPIE_CTG "dm_051" # 22 x A
Adh MAGPIE exon 2280362 2281032 0.684 + 1 MAGPIE_ID "dm_051_GS_dna_5" #dm_051_GS_5.04
Adh MAGPIE gene 2277254 2281032 1 - 2 MAGPIE_ID "dm_051_GS_dna_5" # DE hypothetical protein 3 - fruit fly (437 aa);ST putative;TY single function;CC Close match in Drosophila; transposon?;
Adh MAGPIE polyA_signal 2281037 2281042 . + 1 MAGPIE_ID "dm_051_GS_dna_5"
Adh MAGPIE promotor 2281175 2281214 . + 1 MAGPIE_ID "dm_051_GS_dna_6"
Adh MAGPIE exon 2282647 2282710 0.997 + 0 MAGPIE_ID "dm_051_GS_dna_6" #dm_051_GS_6.01
Adh MAGPIE exon 2283319 2283638 0.470 + 0 MAGPIE_ID "dm_051_GS_dna_6" #dm_051_GS_6.02
Adh MAGPIE gene 2282647 2283638 . - 0 MAGPIE_ID "dm_051_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2284033 2284038 . + 0 MAGPIE_ID "dm_051_GS_dna_6"
Adh MAGPIE polyA_signal 2284293 2284298 . - 0 MAGPIE_ID "dm_051_GS_dna_7"
Adh MAGPIE exon 2286435 2287433 0.986 - 0 MAGPIE_ID "dm_051_GS_dna_7" #dm_051_GS_7.01
Adh MAGPIE gene 2286435 2287433 . - 0 MAGPIE_ID "dm_051_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh blastx similarity 2288795 2288586 . - 2 MAGPIE_CTG "dm_051";TARGET "gi|1817554" #limulus factor D
Adh MAGPIE promotor 2288934 2288973 . - 2 MAGPIE_ID "dm_051_GS_dna_7"
Adh blastx similarity 2288878 2289105 2e-16 - 2 MAGPIE_CTG "dm_051" #>gi|1817554|dbj|BAA13312| (D87214) limulus factor D
Adh MAGPIE promotor 2292529 2292568 . + 0 MAGPIE_ID "dm_051_GS_dna_8"
Adh MAGPIE exon 2294198 2294255 0.948 + 1 MAGPIE_ID "dm_051_GS_dna_8" #dm_051_GS_8.01
Adh MAGPIE exon 2295140 2295360 0.698 + 1 MAGPIE_ID "dm_052_GS_dna_1" #dm_052_GS_1.01
Adh MAGPIE exon 2295140 2295360 0.901 + 1 MAGPIE_ID "dm_051_GS_dna_8" #dm_051_GS_8.02
Adh MAGPIE gene 2294198 2295360 . - 2 MAGPIE_ID "dm_051_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2295140 2295360 . + 1 MAGPIE_ID "dm_052_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2295839 2295844 . + 1 MAGPIE_ID "dm_051_GS_dna_8"
Adh MAGPIE polyA_signal 2295839 2295844 . + 1 MAGPIE_ID "dm_052_GS_dna_1"
Adh MAGPIE polyA_signal 2295856 2295861 . - 2 MAGPIE_ID "dm_051_GS_dna_9"
Adh MAGPIE polyA_signal 2295856 2295861 . - 2 MAGPIE_ID "dm_052_GS_dna_2"
Adh MAGPIE exon 2297756 2297935 0.331 - 1 MAGPIE_ID "dm_052_GS_dna_2" #dm_052_GS_2.02
Adh MAGPIE exon 2297756 2297981 0.735 - 0 MAGPIE_ID "dm_051_GS_dna_9" #dm_051_GS_9.01
Adh MAGPIE gene 2297756 2297981 . - 0 MAGPIE_ID "dm_051_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2298057 2298071 . + 2 MAGPIE_CTG "dm_051" # 15 x A
Adh calypso tandemrepeat 2298057 2298071 . + 2 MAGPIE_CTG "dm_052" # 15 x A
Adh MAGPIE exon 2301474 2301560 0.382 - 0 MAGPIE_ID "dm_052_GS_dna_2" #dm_052_GS_2.01
Adh MAGPIE gene 2297756 2301560 . + 1 MAGPIE_ID "dm_052_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2301737 2301756 . + 1 MAGPIE_CTG "dm_052" # 10 x CA
Adh MAGPIE promotor 2302054 2302093 . - 1 MAGPIE_ID "dm_052_GS_dna_2"
Adh MAGPIE promotor 2302430 2302469 . + 1 MAGPIE_ID "dm_052_GS_dna_3"
Adh calypso tandemrepeat 2302523 2302543 . + 1 MAGPIE_CTG "dm_052" # 7 x AGC
Adh MAGPIE exon 2302519 2303025 0.966 + 0 MAGPIE_ID "dm_052_GS_dna_3" #dm_052_GS_3.01
Adh MAGPIE gene 2302519 2303025 . + 0 MAGPIE_ID "dm_052_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2303248 2303253 . + 0 MAGPIE_ID "dm_052_GS_dna_3"
Adh MAGPIE promotor 2303377 2303416 . + 0 MAGPIE_ID "dm_052_GS_dna_4"
Adh MAGPIE exon 2303448 2304641 0.464 + 2 MAGPIE_ID "dm_052_GS_dna_4" #dm_052_GS_4.01
Adh MAGPIE gene 2303448 2304641 . + 2 MAGPIE_ID "dm_052_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2304778 2304783 . + 0 MAGPIE_ID "dm_052_GS_dna_4"
Adh MAGPIE promotor 2304800 2304839 . + 1 MAGPIE_ID "dm_052_GS_dna_5"
Adh MAGPIE exon 2305038 2305397 0.998 + 2 MAGPIE_ID "dm_052_GS_dna_5" #dm_052_GS_5.01
Adh MAGPIE exon 2305489 2305763 0.896 + 0 MAGPIE_ID "dm_052_GS_dna_5" #dm_052_GS_5.02
Adh MAGPIE exon 2305829 2306951 0.958 + 1 MAGPIE_ID "dm_052_GS_dna_5" #dm_052_GS_5.03
Adh MAGPIE gene 2305038 2306951 1 + 2 MAGPIE_ID "dm_052_GS_dna_5" # DE tektin A1 - sea urchin (Strongyl (462 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2307086 2307091 . + 1 MAGPIE_ID "dm_052_GS_dna_5"
Adh MAGPIE promotor 2307131 2307170 . + 1 MAGPIE_ID "dm_052_GS_dna_6"
Adh MAGPIE exon 2309520 2309676 0.832 + 2 MAGPIE_ID "dm_052_GS_dna_6" #dm_052_GS_6.01
Adh MAGPIE exon 2310116 2310229 0.459 + 1 MAGPIE_ID "dm_052_GS_dna_6" #dm_052_GS_6.02
Adh MAGPIE exon 2310335 2310516 0.393 + 1 MAGPIE_ID "dm_052_GS_dna_6" #dm_052_GS_6.03
Adh MAGPIE exon 2311125 2311544 0.775 + 2 MAGPIE_ID "dm_052_GS_dna_6" #dm_052_GS_6.04
Adh MAGPIE gene 2309520 2311544 . + 2 MAGPIE_ID "dm_052_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2312317 2312322 . + 0 MAGPIE_ID "dm_052_GS_dna_6"
Adh MAGPIE promotor 2313856 2313895 . + 0 MAGPIE_ID "dm_052_GS_dna_7"
Adh MAGPIE exon 2313937 2314044 0.813 + 0 MAGPIE_ID "dm_052_GS_dna_7" #dm_052_GS_7.01
Adh MAGPIE exon 2314099 2314204 0.763 + 0 MAGPIE_ID "dm_052_GS_dna_7" #dm_052_GS_7.02
Adh MAGPIE exon 2315279 2315487 0.272 + 1 MAGPIE_ID "dm_052_GS_dna_7" #dm_052_GS_7.03
Adh MAGPIE gene 2313937 2315487 . + 0 MAGPIE_ID "dm_052_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2315522 2315527 . + 1 MAGPIE_ID "dm_052_GS_dna_7"
Adh MAGPIE polyA_signal 2315636 2315641 . - 1 MAGPIE_ID "dm_052_GS_dna_8"
Adh MAGPIE exon 2315767 2315925 0.328 - 2 MAGPIE_ID "dm_052_GS_dna_8" #dm_052_GS_8.02
Adh MAGPIE exon 2315991 2316098 0.857 - 0 MAGPIE_ID "dm_052_GS_dna_8" #dm_052_GS_8.01
Adh MAGPIE gene 2315767 2316098 . + 0 MAGPIE_ID "dm_052_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2316130 2316169 . - 1 MAGPIE_ID "dm_052_GS_dna_8"
Adh reputer repeat 2316117 2316235 . + . REPEAT "46" # maximal forward repeat
Adh MAGPIE promotor 2316718 2316757 . + 0 MAGPIE_ID "dm_052_GS_dna_9"
Adh MAGPIE exon 2318127 2318178 0.341 + 2 MAGPIE_ID "dm_052_GS_dna_9" #dm_052_GS_9.01
Adh calypso tandemrepeat 2321002 2321024 . + 0 MAGPIE_CTG "dm_052" # 23 x A
Adh calypso tandemrepeat 2324093 2324107 . + 1 MAGPIE_CTG "dm_052" # 15 x A
Adh MAGPIE exon 2325779 2325915 0.171 + 1 MAGPIE_ID "dm_052_GS_dna_9" #dm_052_GS_9.02
Adh MAGPIE gene 2318127 2325915 . + 2 MAGPIE_ID "dm_052_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2326779 2326784 . + 2 MAGPIE_ID "dm_052_GS_dna_9"
Adh MAGPIE exon 2328290 2328403 0.998 - 1 MAGPIE_ID "dm_052_GS_dna_10" #dm_052_GS_10.05
Adh MAGPIE exon 2328611 2329967 0.881 - 0 MAGPIE_ID "dm_052_GS_dna_10" #dm_052_GS_10.04
Adh MAGPIE exon 2330026 2330181 0.527 - 2 MAGPIE_ID "dm_052_GS_dna_10" #dm_052_GS_10.03
Adh blastx similarity 2330258 2330626 1e-60 - 1 MAGPIE_CTG "dm_052" #>gi|113750|sp|P15684|AMPN_RAT AMINOPEPTIDASE N
Adh MAGPIE exon 2330600 2330652 0.521 - 2 MAGPIE_ID "dm_052_GS_dna_10" #dm_052_GS_10.02
Adh MAGPIE exon 2331101 2331310 0.938 - 1 MAGPIE_ID "dm_052_GS_dna_10" #dm_052_GS_10.01
Adh MAGPIE gene 2328290 2331310 1 + 1 MAGPIE_ID "dm_052_GS_dna_10" # DE insulin-regulated membrane aminopeptidase;ST putative;TY single function;CC No exact matches.;
Adh reputer repeat 2333867 2333985 . + . REPEAT "46" # maximal forward repeat
Adh MAGPIE exon 2335716 2335977 0.906 + 2 MAGPIE_ID "dm_052_GS_dna_11" #dm_052_GS_11.01
Adh MAGPIE exon 2337332 2337479 0.388 + 1 MAGPIE_ID "dm_052_GS_dna_11" #dm_052_GS_11.02
Adh MAGPIE exon 2338580 2339258 0.352 + 1 MAGPIE_ID "dm_052_GS_dna_11" #dm_052_GS_11.03
Adh MAGPIE gene 2335716 2339258 3 + 2 MAGPIE_ID "dm_052_GS_dna_11" # DE GH17830.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE exon 2339377 2340420 0.999 - 2 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.06
Adh MAGPIE exon 2340041 2340420 0.763 - 2 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.07
Adh MAGPIE exon 2340535 2341630 0.980 - 1 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.05
Adh MAGPIE exon 2340535 2341630 0.980 - 1 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.06
Adh blastx similarity 2340010 2341788 4e-56 - 2 MAGPIE_CTG "dm_053" #>gi|131756|sp|P20742|PZP_HUMAN PREGNANCY ZONE PROTEIN
Adh MAGPIE exon 2341725 2341808 0.774 - 0 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.04
Adh MAGPIE exon 2341725 2341808 0.774 - 0 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.05
Adh blastx similarity 2339437 2341917 1e-63 - 2 MAGPIE_CTG "dm_052" #>gi|91949|pir||S15904 alpha-1 proteinase inhibitor III
Adh MAGPIE exon 2342156 2342274 0.939 - 2 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.03
Adh MAGPIE exon 2342156 2342274 0.939 - 2 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.04
Adh MAGPIE exon 2342341 2342602 0.804 - 1 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.02
Adh MAGPIE exon 2342341 2342602 0.805 - 1 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.03
Adh MAGPIE exon 2342664 2343851 0.439 - 0 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.02
Adh MAGPIE exon 2342664 2343851 0.596 - 0 MAGPIE_ID "dm_052_GS_dna_12" #dm_052_GS_12.01
Adh MAGPIE gene 2339377 2343851 1 + 0 MAGPIE_ID "dm_052_GS_dna_12" # DE SD01123.5prime SD EST drosophila;ST putative;TY single function;CC No exact matches.;
Adh MAGPIE exon 2343893 2343909 0.421 - 2 MAGPIE_ID "dm_053_GS_dna_1" #dm_053_GS_1.01
Adh MAGPIE gene 2340041 2343909 1 + 1 MAGPIE_ID "dm_053_GS_dna_1" # DE alpha-1-macroglobulin;ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE promotor 2345549 2345588 . - 0 MAGPIE_ID "dm_053_GS_dna_1"
Adh MAGPIE promotor 2345662 2345701 . + 0 MAGPIE_ID "dm_053_GS_dna_2"
Adh MAGPIE exon 2346572 2346942 0.181 + 1 MAGPIE_ID "dm_053_GS_dna_2" #dm_053_GS_2.01
Adh MAGPIE exon 2347013 2347323 0.970 + 1 MAGPIE_ID "dm_053_GS_dna_2" #dm_053_GS_2.02
Adh MAGPIE exon 2347420 2347676 0.773 + 0 MAGPIE_ID "dm_053_GS_dna_2" #dm_053_GS_2.03
Adh MAGPIE gene 2346572 2347676 3 + 1 MAGPIE_ID "dm_053_GS_dna_2" # DE drosophila melanogaster microtubule;ST putative;TY single function;CC Level 3 match to Drosophila;
Adh MAGPIE polyA_signal 2347747 2347752 . + 0 MAGPIE_ID "dm_053_GS_dna_2"
Adh MAGPIE polyA_signal 2347866 2347871 . - 0 MAGPIE_ID "dm_053_GS_dna_3"
Adh calypso tandemrepeat 2348152 2348171 . + 0 MAGPIE_CTG "dm_053" # 4 x ATACC
Adh calypso tandemrepeat 2348301 2348315 . + 2 MAGPIE_CTG "dm_053" # 15 x G
Adh MAGPIE exon 2348982 2349115 0.691 - 1 MAGPIE_ID "dm_053_GS_dna_3" #dm_053_GS_3.03
Adh MAGPIE exon 2349968 2350879 0.770 - 1 MAGPIE_ID "dm_053_GS_dna_3" #dm_053_GS_3.02
Adh MAGPIE exon 2352080 2353052 0.862 - 0 MAGPIE_ID "dm_053_GS_dna_3" #dm_053_GS_3.01
Adh MAGPIE gene 2348982 2353052 1 + 2 MAGPIE_ID "dm_053_GS_dna_3" # DE vitellogenic carboxypeptide (471 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE promotor 2353078 2353117 . - 1 MAGPIE_ID "dm_053_GS_dna_3"
Adh MAGPIE promotor 2353190 2353229 . + 1 MAGPIE_ID "dm_053_GS_dna_4"
Adh MAGPIE exon 2354284 2354606 0.498 + 0 MAGPIE_ID "dm_053_GS_dna_4" #dm_053_GS_4.01
Adh MAGPIE exon 2354627 2354857 0.809 + 1 MAGPIE_ID "dm_053_GS_dna_4" #dm_053_GS_4.02
Adh MAGPIE exon 2355299 2355506 0.598 + 1 MAGPIE_ID "dm_053_GS_dna_4" #dm_053_GS_4.03
Adh MAGPIE gene 2354284 2355506 . + 0 MAGPIE_ID "dm_053_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2355657 2355662 . + 2 MAGPIE_ID "dm_053_GS_dna_4"
Adh MAGPIE polyA_signal 2355826 2355831 . - 2 MAGPIE_ID "dm_053_GS_dna_5"
Adh calypso tandemrepeat 2356498 2356512 . + 0 MAGPIE_CTG "dm_053" # 3 x AACAG
Adh MAGPIE exon 2356272 2356710 0.938 - 2 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.08
Adh MAGPIE exon 2356872 2357164 0.953 - 1 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.07
Adh MAGPIE exon 2357224 2357495 0.788 - 0 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.06
Adh MAGPIE exon 2357539 2357674 0.999 - 1 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.05
Adh MAGPIE exon 2358742 2358953 0.983 - 0 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.04
Adh MAGPIE exon 2362252 2362426 0.441 - 1 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.03
Adh MAGPIE exon 2363206 2363370 0.823 - 2 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.02
Adh MAGPIE exon 2363486 2363521 0.933 - 1 MAGPIE_ID "dm_053_GS_dna_5" #dm_053_GS_5.01
Adh MAGPIE gene 2356272 2363521 1 + 2 MAGPIE_ID "dm_053_GS_dna_5" # DE beaten path precursor;ST putative;TY single function;CC Close match in Drosophila; gene duplication?;
Adh calypso tandemrepeat 2363903 2363918 . + 1 MAGPIE_CTG "dm_053" # 8 x TA
Adh MAGPIE promotor 2363885 2363924 . - 0 MAGPIE_ID "dm_053_GS_dna_5"
Adh MAGPIE promotor 2364053 2364092 . + 1 MAGPIE_ID "dm_053_GS_dna_6"
Adh MAGPIE exon 2365166 2365471 0.998 + 1 MAGPIE_ID "dm_053_GS_dna_6" #dm_053_GS_6.01
Adh MAGPIE gene 2365166 2365471 . + 1 MAGPIE_ID "dm_053_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2365560 2365574 . + 2 MAGPIE_CTG "dm_053" # 15 x A
Adh MAGPIE polyA_signal 2365585 2365590 . + 0 MAGPIE_ID "dm_053_GS_dna_6"
Adh MAGPIE polyA_signal 2365639 2365644 . - 2 MAGPIE_ID "dm_053_GS_dna_7"
Adh MAGPIE exon 2365688 2365814 0.272 - 0 MAGPIE_ID "dm_053_GS_dna_7" #dm_053_GS_7.02
Adh MAGPIE exon 2366015 2366304 0.271 - 2 MAGPIE_ID "dm_053_GS_dna_7" #dm_053_GS_7.01
Adh MAGPIE gene 2365688 2366304 . + 1 MAGPIE_ID "dm_053_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2366506 2366545 . - 1 MAGPIE_ID "dm_053_GS_dna_7"
Adh MAGPIE polyA_signal 2366638 2366643 . - 2 MAGPIE_ID "dm_053_GS_dna_8"
Adh MAGPIE exon 2367880 2368018 0.225 - 1 MAGPIE_ID "dm_053_GS_dna_8" #dm_053_GS_8.03
Adh MAGPIE exon 2368647 2368753 0.198 - 1 MAGPIE_ID "dm_053_GS_dna_8" #dm_053_GS_8.02
Adh MAGPIE exon 2370974 2371207 0.644 - 1 MAGPIE_ID "dm_053_GS_dna_8" #dm_053_GS_8.01
Adh MAGPIE gene 2367880 2371207 2 + 0 MAGPIE_ID "dm_053_GS_dna_8" # DE GH27987.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE promotor 2371243 2371282 . - 1 MAGPIE_ID "dm_053_GS_dna_8"
Adh MAGPIE promotor 2372257 2372296 . + 0 MAGPIE_ID "dm_053_GS_dna_9"
Adh MAGPIE exon 2372572 2372919 0.765 + 0 MAGPIE_ID "dm_053_GS_dna_9" #dm_053_GS_9.01
Adh MAGPIE gene 2372572 2372919 . + 0 MAGPIE_ID "dm_053_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2373090 2373095 . + 2 MAGPIE_ID "dm_053_GS_dna_9"
Adh calypso tandemrepeat 2373664 2373679 . + 0 MAGPIE_CTG "dm_053" # 4 x AATA
Adh MAGPIE exon 2374085 2374294 0.674 + 1 MAGPIE_ID "dm_053_GS_dna_10" #dm_053_GS_10.01
Adh reputer repeat 2375509 2375593 . + . REPEAT "25" # maximal forward repeat
Adh reputer repeat 2375520 2375593 . + . REPEAT "44" # maximal forward repeat
Adh reputer repeat 2375625 2375676 . + . REPEAT "14" # maximal forward repeat
Adh reputer repeat 2375625 2375722 . + . REPEAT "13" # maximal forward repeat
Adh reputer repeat 2375748 2375821 . + . REPEAT "44" # maximal forward repeat
Adh reputer repeat 2375748 2375904 . + . REPEAT "43" # maximal forward repeat
Adh reputer repeat 2375853 2375904 . + . REPEAT "14" # maximal forward repeat
Adh reputer repeat 2375906 2375958 . + . REPEAT "69" # maximal forward repeat
Adh reputer repeat 2375965 2376049 . + . REPEAT "25" # maximal forward repeat
Adh reputer repeat 2375976 2376132 . + . REPEAT "43" # maximal forward repeat
Adh reputer repeat 2376081 2376178 . + . REPEAT "13" # maximal forward repeat
Adh reputer repeat 2375960 2376181 . + . REPEAT "23" # maximal forward repeat
Adh reputer repeat 2375906 2376186 . + . REPEAT "68" # maximal forward repeat
Adh reputer repeat 2376193 2376277 . + . REPEAT "25" # maximal forward repeat
Adh reputer repeat 2376204 2376360 . + . REPEAT "43" # maximal forward repeat
Adh reputer repeat 2376309 2376406 . + . REPEAT "13" # maximal forward repeat
Adh reputer repeat 2376188 2376409 . + . REPEAT "22" # maximal forward repeat
Adh reputer repeat 2376134 2376414 . + . REPEAT "68" # maximal forward repeat
Adh reputer repeat 2376362 2376414 . + . REPEAT "69" # maximal forward repeat
Adh blastx similarity 2375510 2376496 2e-12 - 1 MAGPIE_CTG "dm_053" #>gi|2317934 (U97553) unknown [murine herpesvirus 68]
Adh reputer repeat 2376421 2376505 . + . REPEAT "25" # maximal forward repeat
Adh reputer repeat 2376432 2376588 . + . REPEAT "43" # maximal forward repeat
Adh reputer repeat 2376537 2376634 . + . REPEAT "13" # maximal forward repeat
Adh reputer repeat 2376416 2376637 . + . REPEAT "22" # maximal forward repeat
Adh reputer repeat 2376416 2376637 . + . REPEAT "23" # maximal forward repeat
Adh MAGPIE exon 2374356 2376860 0.986 + 2 MAGPIE_ID "dm_053_GS_dna_10" #dm_053_GS_10.02
Adh MAGPIE exon 2377665 2377875 0.930 + 2 MAGPIE_ID "dm_053_GS_dna_10" #dm_053_GS_10.03
Adh calypso tandemrepeat 2379370 2379385 . + 0 MAGPIE_CTG "dm_053" # 16 x A
Adh MAGPIE exon 2379582 2379724 0.942 + 2 MAGPIE_ID "dm_053_GS_dna_10" #dm_053_GS_10.04
Adh MAGPIE gene 2374085 2379724 1 + 1 MAGPIE_ID "dm_053_GS_dna_10" # DE LP01559.5prime LP EST drosophila;ST putative;TY single function;CC No exact match among proteins or cDNAs;
Adh calypso tandemrepeat 2382389 2382404 . + 1 MAGPIE_CTG "dm_053" # 8 x AC
Adh MAGPIE exon 2385180 2385273 0.596 + 2 MAGPIE_ID "dm_054_GS_dna_1" #dm_054_GS_1.01
Adh MAGPIE exon 2392116 2392737 0.001 + 2 MAGPIE_ID "dm_054_GS_dna_1" #dm_054_GS_1.02
Adh MAGPIE exon 2392800 2393095 0.992 + 2 MAGPIE_ID "dm_054_GS_dna_1" #dm_054_GS_1.03
Adh MAGPIE exon 2393155 2393333 0.991 + 0 MAGPIE_ID "dm_054_GS_dna_1" #dm_054_GS_1.04
Adh MAGPIE exon 2395174 2395323 0.973 + 0 MAGPIE_ID "dm_054_GS_dna_1" #dm_054_GS_1.05
Adh MAGPIE gene 2385180 2395323 . - 2 MAGPIE_ID "dm_054_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2395817 2395822 . + 1 MAGPIE_ID "dm_054_GS_dna_1"
Adh MAGPIE promotor 2396443 2396482 . + 0 MAGPIE_ID "dm_054_GS_dna_2"
Adh MAGPIE exon 2398367 2398380 0.252 + 1 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.01
Adh MAGPIE exon 2398534 2398815 0.198 + 0 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.02
Adh calypso tandemrepeat 2400669 2400683 . + 2 MAGPIE_CTG "dm_054" # 5 x TGT
Adh MAGPIE exon 2400367 2400843 0.135 + 0 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.03
Adh calypso tandemrepeat 2401208 2401225 . + 1 MAGPIE_CTG "dm_054" # 9 x AT
Adh calypso tandemrepeat 2401610 2401629 . + 1 MAGPIE_CTG "dm_054" # 4 x ATAAT
Adh calypso tandemrepeat 2405966 2405981 . + 1 MAGPIE_CTG "dm_054" # 8 x AT
Adh MAGPIE exon 2406425 2406634 0.507 + 1 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.04
Adh MAGPIE exon 2407447 2407845 0.656 + 0 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.05
Adh MAGPIE exon 2407960 2408288 0.911 + 0 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.06
Adh MAGPIE exon 2410246 2410394 0.593 + 0 MAGPIE_ID "dm_054_GS_dna_2" #dm_054_GS_2.07
Adh MAGPIE gene 2398367 2410394 3 - 0 MAGPIE_ID "dm_054_GS_dna_2" # DE zx06f03.r1 EST soares total fetus;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2410444 2410449 . + 0 MAGPIE_ID "dm_054_GS_dna_2"
Adh MAGPIE polyA_signal 2411236 2411241 . - 2 MAGPIE_ID "dm_054_GS_dna_3"
Adh calypso tandemrepeat 2414339 2414356 . + 1 MAGPIE_CTG "dm_054" # 6 x CAA
Adh MAGPIE exon 2414304 2414626 0.380 - 1 MAGPIE_ID "dm_054_GS_dna_3" #dm_054_GS_3.03
Adh MAGPIE exon 2414976 2415135 0.528 - 2 MAGPIE_ID "dm_054_GS_dna_3" #dm_054_GS_3.02
Adh MAGPIE exon 2415472 2415600 0.960 - 2 MAGPIE_ID "dm_054_GS_dna_3" #dm_054_GS_3.01
Adh MAGPIE gene 2414304 2415600 . - 2 MAGPIE_ID "dm_054_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2415607 2415646 . - 1 MAGPIE_ID "dm_054_GS_dna_3"
Adh MAGPIE promotor 2415661 2415700 . + 0 MAGPIE_ID "dm_054_GS_dna_4"
Adh MAGPIE exon 2415779 2415817 0.531 + 1 MAGPIE_ID "dm_054_GS_dna_4" #dm_054_GS_4.01
Adh MAGPIE exon 2416355 2416527 0.276 + 1 MAGPIE_ID "dm_054_GS_dna_4" #dm_054_GS_4.02
Adh MAGPIE exon 2416779 2416879 0.538 + 2 MAGPIE_ID "dm_054_GS_dna_4" #dm_054_GS_4.03
Adh MAGPIE exon 2417682 2417932 0.401 + 2 MAGPIE_ID "dm_054_GS_dna_4" #dm_054_GS_4.04
Adh calypso tandemrepeat 2418287 2418302 . + 1 MAGPIE_CTG "dm_054" # 4 x GTGC
Adh MAGPIE exon 2420182 2420319 0.457 + 0 MAGPIE_ID "dm_054_GS_dna_4" #dm_054_GS_4.05
Adh MAGPIE gene 2415779 2420319 . - 2 MAGPIE_ID "dm_054_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2420823 2420828 . + 2 MAGPIE_ID "dm_054_GS_dna_4"
Adh MAGPIE polyA_signal 2420993 2420998 . - 1 MAGPIE_ID "dm_054_GS_dna_5"
Adh calypso tandemrepeat 2421556 2421570 . + 0 MAGPIE_CTG "dm_054" # 5 x TGG
Adh MAGPIE exon 2421403 2421733 0.072 - 1 MAGPIE_ID "dm_054_GS_dna_5" #dm_054_GS_5.03
Adh calypso tandemrepeat 2421891 2421906 . + 2 MAGPIE_CTG "dm_054" # 4 x ATAC
Adh MAGPIE exon 2422862 2423079 0.044 - 2 MAGPIE_ID "dm_054_GS_dna_5" #dm_054_GS_5.02
Adh MAGPIE exon 2423115 2423234 0.166 - 0 MAGPIE_ID "dm_054_GS_dna_5" #dm_054_GS_5.01
Adh MAGPIE gene 2421403 2423234 . - 0 MAGPIE_ID "dm_054_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2425056 2425079 . + 2 MAGPIE_CTG "dm_054" # 6 x ACTG
Adh calypso tandemrepeat 2425105 2425122 . + 0 MAGPIE_CTG "dm_054" # 9 x GT
Adh MAGPIE promotor 2427763 2427802 . - 1 MAGPIE_ID "dm_054_GS_dna_5"
Adh calypso tandemrepeat 2427790 2427807 . + 0 MAGPIE_CTG "dm_054" # 9 x TA
Adh MAGPIE promotor 2428068 2428107 . + 2 MAGPIE_ID "dm_054_GS_dna_6"
Adh MAGPIE exon 2428833 2429381 0.998 + 2 MAGPIE_ID "dm_054_GS_dna_6" #dm_054_GS_6.01
Adh MAGPIE gene 2428833 2429381 1 - 0 MAGPIE_ID "dm_054_GS_dna_6" # DE outer arm dynein l (199 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2429417 2429422 . + 1 MAGPIE_ID "dm_054_GS_dna_6"
Adh MAGPIE polyA_signal 2430077 2430082 . - 1 MAGPIE_ID "dm_054_GS_dna_7"
Adh MAGPIE exon 2431658 2431860 0.958 - 2 MAGPIE_ID "dm_054_GS_dna_7" #dm_054_GS_7.01
Adh MAGPIE gene 2431658 2431860 . - 2 MAGPIE_ID "dm_054_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2435576 2435590 . + 1 MAGPIE_CTG "dm_055" # 15 x A
Adh calypso tandemrepeat 2439263 2439278 . + 1 MAGPIE_CTG "dm_055" # 8 x TG
Adh calypso tandemrepeat 2439509 2439523 . + 1 MAGPIE_CTG "dm_055" # 3 x GTAAT
Adh MAGPIE exon 2439978 2440179 0.789 + 2 MAGPIE_ID "dm_055_GS_dna_1" #dm_055_GS_1.01
Adh calypso tandemrepeat 2441087 2441104 . + 1 MAGPIE_CTG "dm_055" # 3 x ACGCAC
Adh MAGPIE exon 2441079 2441209 0.882 + 2 MAGPIE_ID "dm_055_GS_dna_1" #dm_055_GS_1.02
Adh MAGPIE gene 2439978 2441209 . - 1 MAGPIE_ID "dm_055_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2441458 2441463 . + 0 MAGPIE_ID "dm_055_GS_dna_1"
Adh MAGPIE promotor 2443185 2443224 . + 2 MAGPIE_ID "dm_055_GS_dna_2"
Adh MAGPIE exon 2443537 2443726 0.125 + 0 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.01
Adh MAGPIE exon 2444164 2444213 0.086 + 0 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.02
Adh calypso tandemrepeat 2444339 2444362 . + 1 MAGPIE_CTG "dm_055" # 12 x GT
Adh MAGPIE exon 2445262 2445365 0.081 + 0 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.03
Adh MAGPIE exon 2445792 2445848 0.090 + 2 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.04
Adh MAGPIE exon 2449650 2449838 0.086 + 2 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.05
Adh MAGPIE exon 2451225 2451400 0.496 + 2 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.06
Adh MAGPIE exon 2452356 2452477 0.503 + 2 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.07
Adh MAGPIE exon 2452560 2452721 0.769 + 2 MAGPIE_ID "dm_055_GS_dna_2" #dm_055_GS_2.08
Adh MAGPIE gene 2443537 2452721 . - 0 MAGPIE_ID "dm_055_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2452881 2452886 . + 2 MAGPIE_ID "dm_055_GS_dna_2"
Adh MAGPIE promotor 2453050 2453089 . + 0 MAGPIE_ID "dm_055_GS_dna_3"
Adh MAGPIE exon 2454209 2454275 0.135 + 1 MAGPIE_ID "dm_055_GS_dna_3" #dm_055_GS_3.01
Adh fstdmEST exon 2453843 2454277 99 + 1 MAGPIE_CTG "dm_055" #exon based on EST GH11864.5prime AI134404
Adh calypso tandemrepeat 2455870 2455885 . + 0 MAGPIE_CTG "dm_055" # 16 x A
Adh calypso tandemrepeat 2456271 2456288 . + 2 MAGPIE_CTG "dm_055" # 3 x CATATA
Adh MAGPIE exon 2458368 2458406 0.148 + 2 MAGPIE_ID "dm_055_GS_dna_3" #dm_055_GS_3.02
Adh MAGPIE exon 2460751 2461259 0.541 + 0 MAGPIE_ID "dm_055_GS_dna_3" #dm_055_GS_3.03
Adh MAGPIE gene 2454209 2461259 . - 0 MAGPIE_ID "dm_055_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2461284 2461289 . + 2 MAGPIE_ID "dm_055_GS_dna_3"
Adh MAGPIE promotor 2463937 2463976 . + 0 MAGPIE_ID "dm_055_GS_dna_4"
Adh MAGPIE exon 2465772 2465965 0.803 + 2 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.01
Adh MAGPIE exon 2466655 2466738 0.074 + 0 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.02
Adh calypso tandemrepeat 2467970 2467987 . + 1 MAGPIE_CTG "dm_055" # 3 x AATGCG
Adh MAGPIE exon 2473984 2474088 0.006 + 0 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.03
Adh calypso tandemrepeat 2475185 2475199 . + 1 MAGPIE_CTG "dm_055" # 3 x TAGAA
Adh calypso tandemrepeat 2475185 2475199 . + 1 MAGPIE_CTG "dm_056" # 3 x TAGAA
Adh MAGPIE exon 2475362 2475560 0.631 + 1 MAGPIE_ID "dm_056_GS_dna_1" #dm_056_GS_1.01
Adh MAGPIE exon 2475406 2475560 0.026 + 0 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.04
Adh MAGPIE exon 2476194 2476460 0.749 + 2 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.05
Adh MAGPIE exon 2476194 2476460 0.751 + 2 MAGPIE_ID "dm_056_GS_dna_1" #dm_056_GS_1.02
Adh MAGPIE exon 2477298 2477356 0.479 + 2 MAGPIE_ID "dm_055_GS_dna_4" #dm_055_GS_4.06
Adh MAGPIE exon 2477298 2477356 0.480 + 2 MAGPIE_ID "dm_056_GS_dna_1" #dm_056_GS_1.03
Adh MAGPIE gene 2465772 2477356 . - 1 MAGPIE_ID "dm_055_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2475362 2477356 . + 1 MAGPIE_ID "dm_056_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2477997 2478002 . + 2 MAGPIE_ID "dm_055_GS_dna_4"
Adh MAGPIE polyA_signal 2477997 2478002 . + 2 MAGPIE_ID "dm_056_GS_dna_1"
Adh MAGPIE polyA_signal 2478020 2478025 . - 1 MAGPIE_ID "dm_055_GS_dna_5"
Adh MAGPIE polyA_signal 2478020 2478025 . - 1 MAGPIE_ID "dm_056_GS_dna_2"
Adh MAGPIE exon 2479122 2479487 0.213 - 0 MAGPIE_ID "dm_055_GS_dna_5" #dm_055_GS_5.01
Adh MAGPIE exon 2479122 2479487 0.269 - 0 MAGPIE_ID "dm_056_GS_dna_2" #dm_056_GS_2.01
Adh MAGPIE gene 2479122 2479487 . + 2 MAGPIE_ID "dm_056_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2479122 2479487 . - 0 MAGPIE_ID "dm_055_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2479920 2479959 . - 2 MAGPIE_ID "dm_056_GS_dna_2"
Adh MAGPIE promotor 2480169 2480208 . + 2 MAGPIE_ID "dm_056_GS_dna_3"
Adh MAGPIE exon 2480542 2480671 0.614 + 0 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.01
Adh MAGPIE exon 2481137 2481328 0.461 + 1 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.02
Adh MAGPIE exon 2481639 2481850 0.997 + 2 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.03
Adh calypso tandemrepeat 2481905 2481922 . + 1 MAGPIE_CTG "dm_056" # 3 x TGGATA
Adh MAGPIE exon 2483447 2483582 0.990 + 1 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.04
Adh calypso tandemrepeat 2483605 2483620 . + 0 MAGPIE_CTG "dm_056" # 4 x TACA
Adh MAGPIE exon 2483839 2483972 0.993 + 0 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.05
Adh MAGPIE exon 2484693 2484860 0.635 + 2 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.06
Adh MAGPIE exon 2486400 2486522 0.814 + 2 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.07
Adh MAGPIE exon 2486596 2486785 0.938 + 0 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.08
Adh calypso tandemrepeat 2488498 2488512 . + 0 MAGPIE_CTG "dm_056" # 5 x TGA
Adh MAGPIE exon 2488134 2488789 0.979 + 2 MAGPIE_ID "dm_056_GS_dna_3" #dm_056_GS_3.09
Adh MAGPIE gene 2480542 2488789 1 + 0 MAGPIE_ID "dm_056_GS_dna_3" # DE beaten path precursor;ST putative;TY single function;CC Same as dm_057_MP_dna_2?;
Adh MAGPIE polyA_signal 2489117 2489122 . + 1 MAGPIE_ID "dm_056_GS_dna_3"
Adh MAGPIE polyA_signal 2489300 2489305 . - 1 MAGPIE_ID "dm_056_GS_dna_4"
Adh MAGPIE exon 2492047 2492253 0.976 - 2 MAGPIE_ID "dm_056_GS_dna_4" #dm_056_GS_4.01
Adh MAGPIE gene 2492047 2492253 3 + 0 MAGPIE_ID "dm_056_GS_dna_4" # DE LD08973.5prime LD EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE promotor 2492812 2492851 . - 1 MAGPIE_ID "dm_056_GS_dna_4"
Adh MAGPIE promotor 2492936 2492975 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh calypso tandemrepeat 2493288 2493302 . + 2 MAGPIE_CTG "dm_056" # 5 x ATC
Adh MAGPIE start_codon 2493314 2493316 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2493314 2493620 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2493620 2493621 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2493681 2493682 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2493682 2493731 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2493731 2493732 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2494046 2494047 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2494047 2494116 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2494116 2494117 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2494179 2494180 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2494180 2494259 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2494259 2494260 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2494324 2494325 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2494325 2494651 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2494651 2494652 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2495099 2495100 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2495100 2495225 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2495225 2495226 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2495285 2495286 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2495286 2495667 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2495667 2495668 . + 2 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2495860 2495861 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2495861 2496988 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice5 2496988 2496989 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE splice3 2497216 2497217 . + 0 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE CDS 2497217 2497464 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE gene 2493314 2497464 1 + 1 MAGPIE_ID "dm_056_MP_dna_5" # GN Bicaudal C;DE bicaudal-c - rna-binding-protein (938 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh calypso tandemrepeat 2499108 2499123 . + 2 MAGPIE_CTG "dm_056" # 8 x CT
Adh calypso tandemrepeat 2500796 2500822 . + 1 MAGPIE_CTG "dm_056" # 9 x GGA
Adh MAGPIE polyA_signal 2501054 2501059 . + 1 MAGPIE_ID "dm_056_MP_dna_5"
Adh MAGPIE promotor 2501295 2501334 . + 2 MAGPIE_ID "dm_056_GS_dna_6"
Adh MAGPIE exon 2501760 2501859 0.762 + 2 MAGPIE_ID "dm_056_GS_dna_6" #dm_056_GS_6.01
Adh calypso tandemrepeat 2503704 2503721 . + 2 MAGPIE_CTG "dm_056" # 9 x TG
Adh calypso tandemrepeat 2504989 2505006 . + 0 MAGPIE_CTG "dm_056" # 3 x CATCCC
Adh MAGPIE CDS 2505534 2505597 . + 2 MAGPIE_ID "dm_057_MP_dna_2" #Initial exon of beaten path precursor.
Adh MAGPIE exon 2505511 2505597 0.943 + 0 MAGPIE_ID "dm_056_GS_dna_6" #dm_056_GS_6.02
Adh MAGPIE exon 2506745 2506866 0.836 + 1 MAGPIE_ID "dm_056_GS_dna_6" #dm_056_GS_6.03
Adh MAGPIE gene 2501760 2506866 . + 2 MAGPIE_ID "dm_056_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2508526 2508531 . + 0 MAGPIE_ID "dm_056_GS_dna_6"
Adh MAGPIE polyA_signal 2508607 2508612 . - 2 MAGPIE_ID "dm_056_GS_dna_7"
Adh MAGPIE exon 2509644 2509922 0.830 - 0 MAGPIE_ID "dm_056_GS_dna_7" #dm_056_GS_7.02
Adh calypso tandemrepeat 2512367 2512389 . + 1 MAGPIE_CTG "dm_056" # 23 x T
Adh calypso tandemrepeat 2512599 2512613 . + 2 MAGPIE_CTG "dm_056" # 3 x GACCT
Adh calypso tandemrepeat 2512614 2512633 . + 2 MAGPIE_CTG "dm_056" # 4 x GAACT
Adh MAGPIE exon 2513313 2513411 0.649 - 0 MAGPIE_ID "dm_056_GS_dna_7" #dm_056_GS_7.01
Adh MAGPIE gene 2509644 2513411 . + 2 MAGPIE_ID "dm_056_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2515812 2515828 . + 2 MAGPIE_CTG "dm_056" # 17 x T
Adh MAGPIE promotor 2517159 2517198 . - 2 MAGPIE_ID "dm_056_GS_dna_7"
Adh calypso tandemrepeat 2518426 2518441 . + 0 MAGPIE_CTG "dm_056" # 8 x AC
Adh MAGPIE polyA_signal 2520209 2520214 . - 1 MAGPIE_ID "dm_056_GS_dna_8"
Adh MAGPIE polyA_signal 2520209 2520214 . - 1 MAGPIE_ID "dm_057_GS_dna_1"
Adh MAGPIE exon 2520582 2520797 0.471 - 0 MAGPIE_ID "dm_057_GS_dna_1" #dm_057_GS_1.02
Adh MAGPIE exon 2520852 2521087 0.385 - 1 MAGPIE_ID "dm_056_GS_dna_8" #dm_056_GS_8.02
Adh MAGPIE exon 2522607 2522738 0.248 - 0 MAGPIE_ID "dm_057_GS_dna_1" #dm_057_GS_1.01
Adh MAGPIE gene 2520582 2522738 . + 2 MAGPIE_ID "dm_057_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 2522638 2522802 0.068 - 2 MAGPIE_ID "dm_056_GS_dna_8" #dm_056_GS_8.01
Adh MAGPIE gene 2520852 2522802 . + 2 MAGPIE_ID "dm_056_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2523516 2523555 . - 2 MAGPIE_ID "dm_057_GS_dna_1"
Adh MAGPIE promotor 2523873 2523912 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2524357 2524565 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice5 2524565 2524566 . + 1 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice3 2525928 2525929 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2525929 2526064 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice5 2526064 2526065 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice3 2527414 2527415 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2527415 2527548 . + 1 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice5 2527548 2527549 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh calypso tandemrepeat 2528405 2528420 . + 1 MAGPIE_CTG "dm_057" # 8 x AC
Adh MAGPIE splice3 2529072 2529073 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2529073 2529195 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice5 2529195 2529196 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice3 2529259 2529260 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2529260 2529455 . + 1 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice5 2529455 2529456 . + 1 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE splice3 2529734 2529735 . + 1 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE CDS 2529735 2530156 . + 2 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE gene 2524357 2530156 1 + 0 MAGPIE_ID "dm_057_MP_dna_2" # GN beaten path;DE beaten path precursor;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 2530924 2530929 . + 0 MAGPIE_ID "dm_057_MP_dna_2"
Adh MAGPIE polyA_signal 2530957 2530962 . - 2 MAGPIE_ID "dm_057_GS_dna_3"
Adh MAGPIE exon 2533991 2534034 0.451 - 2 MAGPIE_ID "dm_057_GS_dna_3" #dm_057_GS_3.05
Adh MAGPIE exon 2536216 2536431 0.546 - 2 MAGPIE_ID "dm_057_GS_dna_3" #dm_057_GS_3.04
Adh MAGPIE exon 2537972 2538092 0.154 - 0 MAGPIE_ID "dm_057_GS_dna_3" #dm_057_GS_3.03
Adh MAGPIE exon 2540736 2541061 0.060 - 1 MAGPIE_ID "dm_057_GS_dna_3" #dm_057_GS_3.02
Adh MAGPIE exon 2541408 2541510 0.884 - 2 MAGPIE_ID "dm_057_GS_dna_3" #dm_057_GS_3.01
Adh MAGPIE gene 2533991 2541510 . + 1 MAGPIE_ID "dm_057_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2542285 2542304 . + 0 MAGPIE_CTG "dm_057" # 5 x AACA
Adh MAGPIE promotor 2543278 2543317 . - 1 MAGPIE_ID "dm_057_GS_dna_3"
Adh MAGPIE promotor 2543923 2543962 . + 0 MAGPIE_ID "dm_057_GS_dna_4"
Adh MAGPIE exon 2544295 2545096 0.563 + 0 MAGPIE_ID "dm_057_GS_dna_4" #dm_057_GS_4.01
Adh MAGPIE exon 2545698 2545846 0.530 + 2 MAGPIE_ID "dm_057_GS_dna_4" #dm_057_GS_4.02
Adh MAGPIE gene 2544295 2545846 1 + 0 MAGPIE_ID "dm_057_GS_dna_4" # DE GH09478.5prime GH EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2546054 2546059 . + 1 MAGPIE_ID "dm_057_GS_dna_4"
Adh MAGPIE promotor 2546181 2546220 . + 2 MAGPIE_ID "dm_057_GS_dna_5"
Adh MAGPIE exon 2549369 2549688 0.929 + 1 MAGPIE_ID "dm_057_GS_dna_5" #dm_057_GS_5.01
Adh MAGPIE exon 2555100 2555176 0.286 + 2 MAGPIE_ID "dm_057_GS_dna_5" #dm_057_GS_5.02
Adh calypso tandemrepeat 2561483 2561499 . + 1 MAGPIE_CTG "dm_057" # 17 x A
Adh calypso tandemrepeat 2562377 2562391 . + 1 MAGPIE_CTG "dm_057" # 3 x TGCAC
Adh calypso tandemrepeat 2562544 2562559 . + 0 MAGPIE_CTG "dm_057" # 8 x GA
Adh calypso tandemrepeat 2562999 2563013 . + 2 MAGPIE_CTG "dm_057" # 3 x TTTGT
Adh calypso tandemrepeat 2564121 2564135 . + 2 MAGPIE_CTG "dm_057" # 3 x TTGAC
Adh MAGPIE exon 2566013 2566312 0.821 + 1 MAGPIE_ID "dm_058_GS_dna_1" #dm_058_GS_1.01
Adh MAGPIE exon 2566020 2566312 0.010 + 2 MAGPIE_ID "dm_057_GS_dna_5" #dm_057_GS_5.03
Adh MAGPIE gene 2549369 2566312 . + 1 MAGPIE_ID "dm_057_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2566013 2566312 . - 1 MAGPIE_ID "dm_058_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2566541 2566546 . + 1 MAGPIE_ID "dm_057_GS_dna_5"
Adh MAGPIE polyA_signal 2566615 2566620 . - 2 MAGPIE_ID "dm_057_GS_dna_6"
Adh MAGPIE polyA_signal 2567288 2567293 . + 1 MAGPIE_ID "dm_058_GS_dna_1"
Adh MAGPIE promotor 2568299 2568338 . + 1 MAGPIE_ID "dm_058_GS_dna_2"
Adh MAGPIE exon 2568461 2568924 0.654 - 2 MAGPIE_ID "dm_057_GS_dna_6" #dm_057_GS_6.01
Adh MAGPIE gene 2568461 2568924 . + 1 MAGPIE_ID "dm_057_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2570414 2570441 . + 1 MAGPIE_CTG "dm_058" # 14 x AC
Adh MAGPIE exon 2571515 2571691 0.883 + 1 MAGPIE_ID "dm_058_GS_dna_2" #dm_058_GS_2.01
Adh MAGPIE exon 2572971 2573222 0.953 + 2 MAGPIE_ID "dm_058_GS_dna_2" #dm_058_GS_2.02
Adh MAGPIE exon 2575792 2576072 0.716 + 0 MAGPIE_ID "dm_058_GS_dna_2" #dm_058_GS_2.03
Adh MAGPIE exon 2578239 2578407 0.535 + 2 MAGPIE_ID "dm_058_GS_dna_2" #dm_058_GS_2.04
Adh MAGPIE gene 2571515 2578407 . - 2 MAGPIE_ID "dm_058_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2578635 2578640 . + 2 MAGPIE_ID "dm_058_GS_dna_2"
Adh MAGPIE polyA_signal 2578673 2578678 . - 1 MAGPIE_ID "dm_058_GS_dna_3"
Adh calypso tandemrepeat 2579771 2579796 . + 1 MAGPIE_CTG "dm_058" # 13 x TA
Adh MAGPIE exon 2580455 2580779 0.722 - 0 MAGPIE_ID "dm_058_GS_dna_3" #dm_058_GS_3.03
Adh MAGPIE exon 2580838 2580999 0.473 - 2 MAGPIE_ID "dm_058_GS_dna_3" #dm_058_GS_3.02
Adh MAGPIE exon 2581149 2581234 0.655 - 1 MAGPIE_ID "dm_058_GS_dna_3" #dm_058_GS_3.01
Adh MAGPIE gene 2580455 2581234 . - 1 MAGPIE_ID "dm_058_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2581725 2581745 . + 2 MAGPIE_CTG "dm_058" # 21 x T
Adh calypso tandemrepeat 2582249 2582264 . + 1 MAGPIE_CTG "dm_058" # 8 x AC
Adh MAGPIE promotor 2582426 2582465 . - 0 MAGPIE_ID "dm_058_GS_dna_3"
Adh MAGPIE promotor 2582799 2582838 . + 2 MAGPIE_ID "dm_058_GS_dna_4"
Adh MAGPIE exon 2582975 2583547 0.981 + 1 MAGPIE_ID "dm_058_GS_dna_4" #dm_058_GS_4.01
Adh MAGPIE gene 2582975 2583547 3 - 1 MAGPIE_ID "dm_058_GS_dna_4" # DE anon2c9;ST putative;TY single function;CC Level 3 match in Drosophila; gene duplication?;
Adh MAGPIE polyA_signal 2583650 2583655 . + 1 MAGPIE_ID "dm_058_GS_dna_4"
Adh MAGPIE polyA_signal 2583988 2583993 . - 2 MAGPIE_ID "dm_058_GS_dna_5"
Adh MAGPIE exon 2584077 2584353 0.976 - 2 MAGPIE_ID "dm_058_GS_dna_5" #dm_058_GS_5.04
Adh MAGPIE exon 2584421 2584527 0.267 - 2 MAGPIE_ID "dm_058_GS_dna_5" #dm_058_GS_5.03
Adh MAGPIE exon 2585705 2585917 0.191 - 1 MAGPIE_ID "dm_058_GS_dna_5" #dm_058_GS_5.02
Adh MAGPIE exon 2586623 2586772 0.624 - 1 MAGPIE_ID "dm_058_GS_dna_5" #dm_058_GS_5.01
Adh MAGPIE gene 2584077 2586772 3 - 1 MAGPIE_ID "dm_058_GS_dna_5" # DE MALE specific sperm PRO (68 aa);ST putative;TY single function;CC Matches highly-repetitive region in Drosophila protein;
Adh MAGPIE promotor 2588161 2588200 . - 1 MAGPIE_ID "dm_058_GS_dna_5"
Adh MAGPIE promotor 2589999 2590038 . + 2 MAGPIE_ID "dm_058_MP_dna_6"
Adh reputer repeat 2590477 2590575 . - . REPEAT "106" # maximal palindromic repeat
Adh reputer repeat 2590477 2590575 . - . REPEAT "107" # maximal palindromic repeat
Adh calypso tandemrepeat 2590705 2590720 . + 0 MAGPIE_CTG "dm_058" # 4 x TATT
Adh reputer repeat 2590477 2590752 . + . REPEAT "81" # maximal forward repeat
Adh reputer repeat 2590620 2590753 . - . REPEAT "121" # maximal palindromic repeat
Adh reputer repeat 2590620 2590863 . - . REPEAT "97" # maximal palindromic repeat
Adh MAGPIE start_codon 2590910 2590912 . + 1 MAGPIE_ID "dm_058_MP_dna_6"
Adh reputer repeat 2590876 2591577 . - . REPEAT "142" # maximal palindromic repeat
Adh reputer repeat 2591579 2591829 . - . REPEAT "127" # maximal palindromic repeat
Adh reputer repeat 2591831 2592072 . - . REPEAT "104" # maximal palindromic repeat
Adh reputer repeat 2592075 2592188 . - . REPEAT "124" # maximal palindromic repeat
Adh reputer repeat 2592190 2592284 . - . REPEAT "108" # maximal palindromic repeat
Adh reputer repeat 2592286 2592387 . - . REPEAT "129" # maximal palindromic repeat
Adh reputer repeat 2592389 2592632 . - . REPEAT "139" # maximal palindromic repeat
Adh reputer repeat 2592634 2592689 . - . REPEAT "119" # maximal palindromic repeat
Adh reputer repeat 2593068 2593138 . + . REPEAT "83" # maximal forward repeat
Adh reputer repeat 2593068 2593138 . - . REPEAT "134" # maximal palindromic repeat
Adh reputer repeat 2593140 2593199 . + . REPEAT "82" # maximal forward repeat
Adh reputer repeat 2593140 2593199 . - . REPEAT "110" # maximal palindromic repeat
Adh reputer repeat 2593176 2593246 . + . REPEAT "83" # maximal forward repeat
Adh reputer repeat 2593176 2593246 . - . REPEAT "133" # maximal palindromic repeat
Adh reputer repeat 2593248 2593307 . + . REPEAT "82" # maximal forward repeat
Adh reputer repeat 2593248 2593307 . - . REPEAT "109" # maximal palindromic repeat
Adh reputer repeat 2592691 2593881 . - . REPEAT "120" # maximal palindromic repeat
Adh reputer repeat 2593883 2594302 . - . REPEAT "136" # maximal palindromic repeat
Adh blastx similarity 2594702 2594776 0.0 + 1 MAGPIE_CTG "dm_058" #>gi|4377464 unidentified open reading frame I
Adh MAGPIE CDS 2590910 2595141 . + 1 MAGPIE_ID "dm_058_MP_dna_6"
Adh MAGPIE gene 2590910 2595141 1 + 1 MAGPIE_ID "dm_058_MP_dna_6" # GN copia;DE copia transposon protein (1409 aa);ST putative;TY single function;CC Look at FlyBase entry. Almost identical to dm_029_GS_dna_9.;
Adh MAGPIE polyA_signal 2595377 2595382 . + 1 MAGPIE_ID "dm_058_MP_dna_6"
Adh reputer repeat 2594341 2595448 . - . REPEAT "105" # maximal palindromic repeat
Adh reputer repeat 2595350 2595448 . - . REPEAT "107" # maximal palindromic repeat
Adh MAGPIE polyA_signal 2595466 2595471 . - 2 MAGPIE_ID "dm_058_GS_dna_7"
Adh calypso tandemrepeat 2595578 2595593 . + 1 MAGPIE_CTG "dm_058" # 4 x TATT
Adh reputer repeat 2595350 2595625 . + . REPEAT "81" # maximal forward repeat
Adh reputer repeat 2595493 2595625 . - . REPEAT "140" # maximal palindromic repeat
Adh reputer repeat 2595493 2595625 . - . REPEAT "141" # maximal palindromic repeat
Adh calypso tandemrepeat 2596019 2596036 . + 1 MAGPIE_CTG "dm_058" # 3 x TCGTCC
Adh MAGPIE exon 2595904 2596179 0.815 - 2 MAGPIE_ID "dm_058_GS_dna_7" #dm_058_GS_7.01
Adh MAGPIE gene 2595904 2596179 . - 2 MAGPIE_ID "dm_058_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2597900 2597919 . + 1 MAGPIE_CTG "dm_058" # 4 x TTCCG
Adh MAGPIE promotor 2599885 2599924 . - 1 MAGPIE_ID "dm_058_GS_dna_7"
Adh MAGPIE promotor 2600568 2600607 . + 2 MAGPIE_ID "dm_058_GS_dna_8"
Adh MAGPIE exon 2601123 2601215 0.262 + 2 MAGPIE_ID "dm_058_GS_dna_8" #dm_058_GS_8.01
Adh MAGPIE exon 2602563 2602700 0.261 + 2 MAGPIE_ID "dm_058_GS_dna_8" #dm_058_GS_8.02
Adh MAGPIE gene 2601123 2602700 . - 0 MAGPIE_ID "dm_058_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2603118 2603123 . + 2 MAGPIE_ID "dm_058_GS_dna_8"
Adh MAGPIE polyA_signal 2603155 2603160 . - 2 MAGPIE_ID "dm_058_MP_dna_9"
Adh reputer repeat 2603044 2603225 . - . REPEAT "100" # maximal palindromic repeat
Adh reputer repeat 2603050 2603225 . - . REPEAT "102" # maximal palindromic repeat
Adh reputer repeat 2603050 2603464 . + . REPEAT "15" # maximal forward repeat
Adh reputer repeat 2603224 2603464 . - . REPEAT "112" # maximal palindromic repeat
Adh reputer repeat 2603224 2603715 . - . REPEAT "143" # maximal palindromic repeat
Adh reputer repeat 2603717 2603920 . - . REPEAT "116" # maximal palindromic repeat
Adh reputer repeat 2603922 2604772 . - . REPEAT "117" # maximal palindromic repeat
Adh blastx similarity 2603489 2604901 0.0 - 1 MAGPIE_CTG "dm_058" #>gi|119381 ENV POLYPROTEIN (TRANSPOSON 297)
Adh blastx similarity 2604819 2604947 0.0 - 0 MAGPIE_CTG "dm_058" #>gi|422418 pol protein - fruit fly transposon Tom (fragment)
Adh reputer repeat 2604774 2605843 . - . REPEAT "132" # maximal palindromic repeat
Adh reputer repeat 2605845 2607261 . - . REPEAT "126" # maximal palindromic repeat
Adh reputer repeat 2607263 2607884 . - . REPEAT "128" # maximal palindromic repeat
Adh MAGPIE CDS 2604868 2608047 . - 2 MAGPIE_ID "dm_058_MP_dna_9"
Adh MAGPIE gene 2604868 2608047 1 - 2 MAGPIE_ID "dm_058_MP_dna_9" # GN 297 element;DE transposon 297 (1059 aa);ST putative;TY single function;
Adh reputer repeat 2607886 2608694 . - . REPEAT "115" # maximal palindromic repeat
Adh reputer repeat 2608696 2609162 . - . REPEAT "125" # maximal palindromic repeat
Adh reputer repeat 2609164 2609217 . - . REPEAT "118" # maximal palindromic repeat
Adh blastx similarity 2608002 2609243 0.0 - 0 MAGPIE_CTG "dm_058" #>gi|120795 RETROVIRUS-RELATED GAG POLYPROTEIN (TRANSPOSON 297)
Adh reputer repeat 2609219 2609348 . - . REPEAT "98" # maximal palindromic repeat
Adh reputer repeat 2609342 2609600 . - . REPEAT "99" # maximal palindromic repeat
Adh reputer repeat 2609595 2609807 . - . REPEAT "101" # maximal palindromic repeat
Adh reputer repeat 2609632 2609807 . - . REPEAT "103" # maximal palindromic repeat
Adh reputer repeat 2609632 2610046 . + . REPEAT "15" # maximal forward repeat
Adh reputer repeat 2609806 2610046 . - . REPEAT "113" # maximal palindromic repeat
Adh reputer repeat 2609806 2610051 . - . REPEAT "130" # maximal palindromic repeat
Adh calypso tandemrepeat 2613229 2613243 . + 0 MAGPIE_CTG "dm_058" # 3 x AAAAT
Adh calypso tandemrepeat 2613229 2613243 . + 0 MAGPIE_CTG "dm_059" # 3 x AAAAT
Adh MAGPIE start_codon 2619967 2619969 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2619967 2620307 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2620307 2620308 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2621230 2621231 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2621231 2622507 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2622507 2622508 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2622577 2622578 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2622578 2622803 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2622803 2622804 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2622976 2622977 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2622977 2623082 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2623082 2623083 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2623315 2623316 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2623316 2623455 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2623455 2623456 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2623674 2623675 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2623675 2623781 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2623781 2623782 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2624113 2624114 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2624114 2624266 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2624266 2624267 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2624693 2624694 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2624694 2624875 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2624875 2624876 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2624975 2624976 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2624976 2625495 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2625495 2625496 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2625558 2625559 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2625559 2625784 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2625784 2625785 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2625850 2625851 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2625851 2626061 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2626061 2626062 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2626123 2626124 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2626124 2626333 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2626333 2626334 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2626391 2626392 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2626392 2626510 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2626510 2626511 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2626594 2626595 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2626595 2626653 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2626653 2626654 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2627633 2627634 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2627634 2627751 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2627751 2627752 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh calypso tandemrepeat 2627807 2627824 . + 1 MAGPIE_CTG "dm_059" # 9 x TA
Adh MAGPIE splice3 2628165 2628166 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2628166 2628295 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2628295 2628296 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2628459 2628460 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2628460 2628626 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2628626 2628627 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2628717 2628718 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2628718 2628805 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2628805 2628806 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2629397 2629398 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2629398 2629505 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2629505 2629506 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2632037 2632038 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2632038 2632090 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2632090 2632091 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2632151 2632152 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2632152 2632298 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2632298 2632299 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2632362 2632363 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2632363 2632834 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2632834 2632835 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2632888 2632889 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2632889 2632972 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2632972 2632973 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2633027 2633028 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2633028 2633093 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2633093 2633094 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2633148 2633149 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2633149 2633337 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2633337 2633338 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2633396 2633397 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2633397 2633645 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2633645 2633646 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2633705 2633706 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2633706 2634365 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2634365 2634366 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2634451 2634452 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2634452 2634885 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2634885 2634886 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE polyA_signal 2635180 2635185 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2635369 2635370 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2635370 2635410 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice5 2635410 2635411 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh calypso tandemrepeat 2637495 2637509 . + 2 MAGPIE_CTG "dm_059" # 3 x CTTTT
Adh MAGPIE promotor 2637609 2637648 . + 2 MAGPIE_ID "dm_059_GS_dna_2"
Adh MAGPIE splice3 2638283 2638284 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2638284 2638414 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE exon 2638322 2638414 0.968 + 1 MAGPIE_ID "dm_059_GS_dna_2" #dm_059_GS_2.01
Adh MAGPIE splice5 2638414 2638415 . + 0 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE splice3 2638469 2638470 . + 1 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE CDS 2638470 2639006 . + 2 MAGPIE_ID "dm_059_MP_dna_1"
Adh MAGPIE exon 2638470 2639006 0.979 + 2 MAGPIE_ID "dm_059_GS_dna_2" #dm_059_GS_2.02
Adh MAGPIE gene 2619967 2639006 1 + 0 MAGPIE_ID "dm_059_MP_dna_1" # GN Ca-alpha1D;DE Ca2+ channel protein alpha1 subunit D (2516 aa);ST putative;TY single function;CC Look at FlyBase entry. Substitution of T -> C at 2626063, at a 5' splice site? Sequencing error?;
Adh MAGPIE gene 2638322 2639006 1 + 1 MAGPIE_ID "dm_059_GS_dna_2" # DE Ca2+ channel protein alpha1 subunit D (2516 aa);ST putative;TY single function;CC Terminates dm_059_GS_1 - Exact match to end of Drosophila protein;
Adh MAGPIE polyA_signal 2639455 2639460 . + 0 MAGPIE_ID "dm_059_GS_dna_2"
Adh MAGPIE polyA_signal 2639585 2639590 . - 1 MAGPIE_ID "dm_059_GS_dna_3"
Adh calypso tandemrepeat 2640286 2640300 . + 0 MAGPIE_CTG "dm_059" # 5 x AGC
Adh MAGPIE exon 2640219 2640644 0.998 - 0 MAGPIE_ID "dm_059_GS_dna_3" #dm_059_GS_3.01
Adh MAGPIE gene 2640219 2640644 . + 2 MAGPIE_ID "dm_059_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2644081 2644120 . - 1 MAGPIE_ID "dm_059_GS_dna_3"
Adh MAGPIE polyA_signal 2644431 2644436 . - 0 MAGPIE_ID "dm_059_GS_dna_4"
Adh calypso tandemrepeat 2648139 2648156 . + 2 MAGPIE_CTG "dm_059" # 18 x T
Adh MAGPIE exon 2649834 2650229 0.987 - 0 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.06
Adh MAGPIE exon 2651612 2651711 0.564 - 0 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.05
Adh MAGPIE exon 2651787 2651890 0.406 - 1 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.04
Adh calypso tandemrepeat 2653285 2653300 . + 0 MAGPIE_CTG "dm_059" # 8 x CA
Adh MAGPIE exon 2654137 2654334 0.183 - 2 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.03
Adh MAGPIE exon 2655328 2655462 0.940 - 2 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.02
Adh MAGPIE exon 2656120 2656278 0.875 + 0 MAGPIE_ID "dm_060_GS_dna_1" #dm_060_GS_1.01
Adh MAGPIE gene 2656120 2656278 . - 2 MAGPIE_ID "dm_060_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2656348 2656353 . + 0 MAGPIE_ID "dm_060_GS_dna_1"
Adh MAGPIE promotor 2656802 2656841 . + 1 MAGPIE_ID "dm_060_GS_dna_2"
Adh calypso tandemrepeat 2658749 2658763 . + 1 MAGPIE_CTG "dm_059" # 3 x TTTCA
Adh calypso tandemrepeat 2658749 2658763 . + 1 MAGPIE_CTG "dm_060" # 3 x TTTCA
Adh MAGPIE exon 2659219 2659500 0.885 - 2 MAGPIE_ID "dm_059_GS_dna_4" #dm_059_GS_4.01
Adh MAGPIE gene 2649834 2659500 . + 2 MAGPIE_ID "dm_059_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2660137 2660156 . + 0 MAGPIE_CTG "dm_060" # 20 x T
Adh calypso tandemrepeat 2660166 2660183 . + 2 MAGPIE_CTG "dm_060" # 3 x TTTTTG
Adh MAGPIE exon 2660848 2661318 0.911 + 0 MAGPIE_ID "dm_060_GS_dna_2" #dm_060_GS_2.01
Adh MAGPIE exon 2661378 2662292 0.976 + 2 MAGPIE_ID "dm_060_GS_dna_2" #dm_060_GS_2.02
Adh calypso tandemrepeat 2662362 2662381 . + 2 MAGPIE_CTG "dm_060" # 5 x ATTT
Adh calypso tandemrepeat 2664163 2664180 . + 0 MAGPIE_CTG "dm_060" # 3 x TGGTGA
Adh calypso tandemrepeat 2664737 2664751 . + 1 MAGPIE_CTG "dm_060" # 15 x T
Adh MAGPIE exon 2664895 2664990 0.818 + 0 MAGPIE_ID "dm_060_GS_dna_2" #dm_060_GS_2.03
Adh calypso tandemrepeat 2665008 2665025 . + 2 MAGPIE_CTG "dm_060" # 9 x AC
Adh MAGPIE exon 2665660 2665896 0.663 + 0 MAGPIE_ID "dm_060_GS_dna_2" #dm_060_GS_2.04
Adh MAGPIE gene 2660848 2665896 . - 2 MAGPIE_ID "dm_060_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2665932 2665937 . + 2 MAGPIE_ID "dm_060_GS_dna_2"
Adh MAGPIE polyA_signal 2666463 2666468 . - 0 MAGPIE_ID "dm_060_GS_dna_3"
Adh calypso tandemrepeat 2666920 2666934 . + 0 MAGPIE_CTG "dm_060" # 3 x TGTGT
Adh calypso tandemrepeat 2667144 2667163 . + 2 MAGPIE_CTG "dm_060" # 4 x TTTCG
Adh calypso tandemrepeat 2671441 2671459 . + 0 MAGPIE_CTG "dm_060" # 19 x A
Adh MAGPIE exon 2671791 2672087 0.723 - 0 MAGPIE_ID "dm_060_GS_dna_3" #dm_060_GS_3.01
Adh MAGPIE gene 2671791 2672087 . - 0 MAGPIE_ID "dm_060_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2672523 2672562 . - 2 MAGPIE_ID "dm_060_GS_dna_3"
Adh MAGPIE polyA_signal 2672998 2673003 . - 2 MAGPIE_ID "dm_060_GS_dna_4"
Adh calypso tandemrepeat 2674620 2674640 . + 2 MAGPIE_CTG "dm_060" # 7 x TGA
Adh MAGPIE exon 2674498 2674665 0.777 - 2 MAGPIE_ID "dm_060_GS_dna_4" #dm_060_GS_4.01
Adh MAGPIE gene 2674498 2674665 . - 2 MAGPIE_ID "dm_060_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2674769 2674808 . - 0 MAGPIE_ID "dm_060_GS_dna_4"
Adh MAGPIE polyA_signal 2675787 2675792 . - 0 MAGPIE_ID "dm_060_GS_dna_5"
Adh MAGPIE exon 2676107 2676274 0.218 - 1 MAGPIE_ID "dm_060_GS_dna_5" #dm_060_GS_5.02
Adh MAGPIE exon 2680716 2680808 0.885 - 0 MAGPIE_ID "dm_060_GS_dna_5" #dm_060_GS_5.01
Adh MAGPIE gene 2676107 2680808 . - 0 MAGPIE_ID "dm_060_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2680817 2680834 . + 1 MAGPIE_CTG "dm_060" # 9 x CA
Adh MAGPIE promotor 2680862 2680901 . - 0 MAGPIE_ID "dm_060_GS_dna_5"
Adh calypso tandemrepeat 2681867 2681882 . + 1 MAGPIE_CTG "dm_060" # 4 x TTTA
Adh MAGPIE promotor 2683213 2683252 . + 0 MAGPIE_ID "dm_060_GS_dna_6"
Adh calypso tandemrepeat 2683317 2683334 . + 2 MAGPIE_CTG "dm_060" # 9 x AT
Adh MAGPIE exon 2683427 2683473 0.695 + 1 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.01
Adh MAGPIE exon 2684880 2686209 0.999 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.02
Adh MAGPIE exon 2686394 2686570 0.988 + 1 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.03
Adh MAGPIE exon 2686628 2686705 0.534 + 1 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.04
Adh MAGPIE exon 2686770 2687146 0.987 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.05
Adh MAGPIE exon 2687211 2687359 0.999 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.06
Adh MAGPIE exon 2687415 2687794 0.853 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.07
Adh MAGPIE exon 2687988 2688204 0.526 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.08
Adh MAGPIE exon 2688462 2688883 0.980 + 2 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.09
Adh calypso tandemrepeat 2689260 2689281 . + 2 MAGPIE_CTG "dm_060" # 11 x AT
Adh MAGPIE exon 2691203 2694219 0.499 + 1 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.10
Adh MAGPIE exon 2694277 2694414 0.792 + 0 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.11
Adh MAGPIE exon 2694479 2694719 0.737 + 1 MAGPIE_ID "dm_060_GS_dna_6" #dm_060_GS_6.12
Adh MAGPIE gene 2683427 2694719 1 - 0 MAGPIE_ID "dm_060_GS_dna_6" # DE calcium channel alpha (1091 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2694828 2694833 . + 2 MAGPIE_ID "dm_060_GS_dna_6"
Adh MAGPIE polyA_signal 2695114 2695119 . - 2 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE CDS 2696335 2696446 . - 1 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice5 2696446 2696447 . - 0 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice3 2696512 2696513 . - 0 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE CDS 2696513 2696664 . - 2 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice5 2696664 2696665 . - 1 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice3 2697875 2697876 . - 2 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE CDS 2697876 2698028 . - 0 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice5 2698028 2698029 . - 2 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE splice3 2698090 2698091 . - 0 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE CDS 2698091 2698210 . - 1 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE gene 2696335 2698210 1 - 1 MAGPIE_ID "dm_060_MP_dna_7" # GN PRL-1;EC 3.1.3.48;DE prenylated protein tyrosine phosphatase prl-1 (178 aa);ST putative;TY single function;CC Look at FlyBase entry. Sequencing error at 2696665 (G -> C) ?;
Adh MAGPIE start_codon 2698208 2698210 . - 1 MAGPIE_ID "dm_060_MP_dna_7"
Adh calypso tandemrepeat 2698422 2698439 . + 2 MAGPIE_CTG "dm_060" # 3 x ATAAAT
Adh MAGPIE promotor 2698919 2698958 . - 0 MAGPIE_ID "dm_060_MP_dna_7"
Adh MAGPIE promotor 2700066 2700105 . + 2 MAGPIE_ID "dm_060_GS_dna_8"
Adh MAGPIE exon 2701003 2701093 0.729 + 0 MAGPIE_ID "dm_060_GS_dna_8" #dm_060_GS_8.01
Adh MAGPIE exon 2701003 2701093 0.911 + 0 MAGPIE_ID "dm_061_GS_dna_1" #dm_061_GS_1.01
Adh MAGPIE exon 2702379 2702447 0.213 + 2 MAGPIE_ID "dm_060_GS_dna_8" #dm_060_GS_8.02
Adh MAGPIE exon 2702379 2702447 0.570 + 2 MAGPIE_ID "dm_061_GS_dna_1" #dm_061_GS_1.02
Adh calypso tandemrepeat 2702531 2702545 . + 1 MAGPIE_CTG "dm_060" # 15 x T
Adh calypso tandemrepeat 2702531 2702545 . + 1 MAGPIE_CTG "dm_061" # 15 x T
Adh calypso tandemrepeat 2703085 2703102 . + 0 MAGPIE_CTG "dm_060" # 3 x ATAGAT
Adh calypso tandemrepeat 2703085 2703102 . + 0 MAGPIE_CTG "dm_061" # 3 x ATAGAT
Adh MAGPIE exon 2703179 2703294 0.286 + 1 MAGPIE_ID "dm_060_GS_dna_8" #dm_060_GS_8.03
Adh MAGPIE gene 2701003 2703294 . - 2 MAGPIE_ID "dm_060_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2703617 2703622 . + 1 MAGPIE_ID "dm_060_GS_dna_8"
Adh calypso tandemrepeat 2704032 2704048 . + 2 MAGPIE_CTG "dm_060" # 17 x A
Adh calypso tandemrepeat 2704032 2704048 . + 2 MAGPIE_CTG "dm_061" # 17 x A
Adh MAGPIE exon 2707297 2707439 0.983 + 0 MAGPIE_ID "dm_061_GS_dna_1" #dm_061_GS_1.03
Adh MAGPIE exon 2707509 2708522 0.997 + 2 MAGPIE_ID "dm_061_GS_dna_1" #dm_061_GS_1.04
Adh MAGPIE gene 2701003 2708522 3 - 0 MAGPIE_ID "dm_061_GS_dna_1" # DE serine-rich protein (534 aa);ST putative;TY single function;CC Matches s-rich repetitive region.;
Adh MAGPIE polyA_signal 2708662 2708667 . + 0 MAGPIE_ID "dm_061_GS_dna_1"
Adh MAGPIE polyA_signal 2708710 2708715 . - 2 MAGPIE_ID "dm_061_MP_dna_2"
Adh MAGPIE CDS 2709485 2710765 . - 1 MAGPIE_ID "dm_061_MP_dna_2"
Adh MAGPIE gene 2709485 2710765 1 - 1 MAGPIE_ID "dm_061_MP_dna_2" # GN twine;EC 3.1.3.48;DE cdc25-like protein, phosphatase twine (426 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 2710763 2710765 . - 1 MAGPIE_ID "dm_061_MP_dna_2"
Adh MAGPIE promotor 2710767 2710806 . - 2 MAGPIE_ID "dm_061_MP_dna_2"
Adh MAGPIE promotor 2711302 2711341 . + 0 MAGPIE_ID "dm_061_GS_dna_3"
Adh MAGPIE exon 2711460 2711538 0.737 + 2 MAGPIE_ID "dm_061_GS_dna_3" #dm_061_GS_3.01
Adh MAGPIE exon 2711599 2711717 0.920 + 0 MAGPIE_ID "dm_061_GS_dna_3" #dm_061_GS_3.02
Adh MAGPIE exon 2711781 2711853 0.923 + 2 MAGPIE_ID "dm_061_GS_dna_3" #dm_061_GS_3.03
Adh MAGPIE exon 2711910 2712472 0.460 + 2 MAGPIE_ID "dm_061_GS_dna_3" #dm_061_GS_3.04
Adh MAGPIE gene 2711460 2712472 1 - 1 MAGPIE_ID "dm_061_GS_dna_3" # DE hypothetical 54.5 KD T (501 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2712756 2712761 . + 2 MAGPIE_ID "dm_061_GS_dna_3"
Adh MAGPIE polyA_signal 2712796 2712801 . - 2 MAGPIE_ID "dm_061_GS_dna_4"
Adh MAGPIE exon 2712884 2713168 0.213 - 1 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.07
Adh calypso tandemrepeat 2713535 2713554 . + 1 MAGPIE_CTG "dm_061" # 10 x AT
Adh calypso tandemrepeat 2713677 2713696 . + 2 MAGPIE_CTG "dm_061" # 4 x TTTTG
Adh calypso tandemrepeat 2714256 2714271 . + 2 MAGPIE_CTG "dm_061" # 4 x TGTA
Adh MAGPIE exon 2714814 2716277 0.238 - 0 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.06
Adh calypso tandemrepeat 2717410 2717425 . + 0 MAGPIE_CTG "dm_061" # 8 x CT
Adh MAGPIE exon 2717360 2717687 0.059 - 0 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.05
Adh calypso tandemrepeat 2718928 2718945 . + 0 MAGPIE_CTG "dm_061" # 9 x CT
Adh MAGPIE exon 2720157 2720211 0.003 - 2 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.04
Adh MAGPIE exon 2724534 2724951 0.028 - 2 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.03
Adh calypso tandemrepeat 2725501 2725550 . + 0 MAGPIE_CTG "dm_061" # 25 x TA
Adh reputer repeat 2725501 2725550 . + . REPEAT "131" # maximal palindromic repeat
Adh reputer repeat 2725501 2725550 . + . REPEAT "96" # maximal complemented repeat
Adh reputer repeat 2725501 2725550 . - . REPEAT "131" # maximal palindromic repeat
Adh reputer repeat 2725501 2725551 . + . REPEAT "62" # maximal reversed repeat
Adh reputer repeat 2725501 2725551 . + . REPEAT "62" # maximal reversed repeat
Adh reputer repeat 2725502 2725551 . + . REPEAT "114" # maximal palindromic repeat
Adh reputer repeat 2725502 2725551 . + . REPEAT "96" # maximal complemented repeat
Adh reputer repeat 2725502 2725551 . - . REPEAT "114" # maximal palindromic repeat
Adh calypso tandemrepeat 2726451 2726468 . + 2 MAGPIE_CTG "dm_061" # 6 x GTT
Adh MAGPIE exon 2728123 2728429 0.993 - 1 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.02
Adh MAGPIE exon 2730499 2730656 0.016 - 0 MAGPIE_ID "dm_061_GS_dna_4" #dm_061_GS_4.01
Adh MAGPIE gene 2712884 2730656 3 - 0 MAGPIE_ID "dm_061_GS_dna_4" # DE transcription factor AP-4 - human (321 aa);ST putative;TY single function;CC No exact match in Drosophila. missing 1-285 of protein;
Adh MAGPIE promotor 2731112 2731151 . - 0 MAGPIE_ID "dm_061_GS_dna_4"
Adh MAGPIE promotor 2731174 2731213 . + 0 MAGPIE_ID "dm_061_GS_dna_5"
Adh MAGPIE exon 2731305 2731640 0.984 + 2 MAGPIE_ID "dm_061_GS_dna_5" #dm_061_GS_5.01
Adh MAGPIE gene 2731305 2731640 . - 0 MAGPIE_ID "dm_061_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2731791 2731796 . + 2 MAGPIE_ID "dm_061_GS_dna_5"
Adh calypso tandemrepeat 2733177 2733192 . + 2 MAGPIE_CTG "dm_061" # 16 x A
Adh calypso tandemrepeat 2733666 2733683 . + 2 MAGPIE_CTG "dm_061" # 18 x A
Adh MAGPIE promotor 2734631 2734670 . + 1 MAGPIE_ID "dm_061_GS_dna_6"
Adh MAGPIE exon 2734869 2734987 0.963 + 2 MAGPIE_ID "dm_061_GS_dna_6" #dm_061_GS_6.01
Adh MAGPIE exon 2735831 2736108 0.957 + 1 MAGPIE_ID "dm_061_GS_dna_6" #dm_061_GS_6.02
Adh calypso tandemrepeat 2736698 2736713 . + 1 MAGPIE_CTG "dm_061" # 8 x AG
Adh MAGPIE exon 2736795 2737021 0.470 + 2 MAGPIE_ID "dm_061_GS_dna_6" #dm_061_GS_6.03
Adh MAGPIE gene 2734869 2737021 2 - 1 MAGPIE_ID "dm_061_GS_dna_6" # DE LD21475.5prime LD EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2737199 2737204 . + 1 MAGPIE_ID "dm_061_GS_dna_6"
Adh MAGPIE promotor 2737256 2737295 . + 1 MAGPIE_ID "dm_061_GS_dna_7"
Adh MAGPIE exon 2737320 2737427 0.629 + 2 MAGPIE_ID "dm_061_GS_dna_7" #dm_061_GS_7.01
Adh MAGPIE exon 2737640 2737731 0.811 + 1 MAGPIE_ID "dm_061_GS_dna_7" #dm_061_GS_7.02
Adh calypso tandemrepeat 2738053 2738076 . + 0 MAGPIE_CTG "dm_061" # 8 x AGG
Adh calypso tandemrepeat 2738077 2738091 . + 0 MAGPIE_CTG "dm_061" # 5 x TGG
Adh MAGPIE exon 2737873 2738237 0.468 + 0 MAGPIE_ID "dm_061_GS_dna_7" #dm_061_GS_7.03
Adh MAGPIE exon 2738403 2739461 0.996 + 2 MAGPIE_ID "dm_061_GS_dna_7" #dm_061_GS_7.04
Adh MAGPIE exon 2739531 2740039 0.999 + 2 MAGPIE_ID "dm_061_GS_dna_7" #dm_061_GS_7.05
Adh MAGPIE gene 2737320 2740039 2 - 1 MAGPIE_ID "dm_061_GS_dna_7" # DE protein kinase A anchoring protein (662 aa);ST putative;TY single function;CC No exact match in Drosophila.;
Adh MAGPIE polyA_signal 2740436 2740441 . + 1 MAGPIE_ID "dm_061_GS_dna_7"
Adh MAGPIE promotor 2740490 2740529 . + 1 MAGPIE_ID "dm_061_GS_dna_8"
Adh MAGPIE exon 2740542 2741090 0.889 + 2 MAGPIE_ID "dm_061_GS_dna_8" #dm_061_GS_8.01
Adh MAGPIE gene 2740542 2741090 . - 0 MAGPIE_ID "dm_061_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2741189 2741194 . + 1 MAGPIE_ID "dm_061_GS_dna_8"
Adh MAGPIE polyA_signal 2741223 2741228 . - 0 MAGPIE_ID "dm_061_GS_dna_9"
Adh MAGPIE exon 2741387 2741956 0.860 - 1 MAGPIE_ID "dm_061_GS_dna_9" #dm_061_GS_9.01
Adh MAGPIE gene 2741387 2741956 1 - 1 MAGPIE_ID "dm_061_GS_dna_9" # DE SD02668.5prime SD EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE promotor 2741971 2742010 . - 1 MAGPIE_ID "dm_061_GS_dna_9"
Adh calypso tandemrepeat 2742532 2742546 . + 0 MAGPIE_CTG "dm_061" # 5 x CTC
Adh MAGPIE exon 2743611 2745122 0.999 + 2 MAGPIE_ID "dm_061_GS_dna_11" #dm_061_GS_11.01
Adh MAGPIE gene 2743611 2745122 1 - 0 MAGPIE_ID "dm_061_GS_dna_11" # DE cytochrome P450;ST putative;TY single function;CC No exact match to protein or cDNA.;
Adh MAGPIE polyA_signal 2746398 2746403 . - 0 MAGPIE_ID "dm_062_GS_dna_1"
Adh MAGPIE exon 2746815 2747453 0.964 - 0 MAGPIE_ID "dm_061_GS_dna_12" #dm_061_GS_12.02
Adh MAGPIE exon 2746815 2747453 0.964 - 0 MAGPIE_ID "dm_062_GS_dna_1" #dm_062_GS_1.02
Adh MAGPIE exon 2748132 2748572 0.963 - 0 MAGPIE_ID "dm_061_GS_dna_12" #dm_061_GS_12.01
Adh MAGPIE exon 2748132 2748572 0.964 - 0 MAGPIE_ID "dm_062_GS_dna_1" #dm_062_GS_1.01
Adh MAGPIE gene 2746815 2748572 1 - 0 MAGPIE_ID "dm_061_GS_dna_12" # DE CK02500.5prime CK EST drosophila;ST putative;TY single function;CC ESTs are the only exact matches ;
Adh MAGPIE gene 2746815 2748572 1 - 0 MAGPIE_ID "dm_062_GS_dna_1" # DE transitional epithelia response protein (338 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh calypso tandemrepeat 2748916 2748931 . + 0 MAGPIE_CTG "dm_061" # 8 x CT
Adh calypso tandemrepeat 2748916 2748931 . + 0 MAGPIE_CTG "dm_062" # 8 x CT
Adh MAGPIE promotor 2749384 2749423 . - 1 MAGPIE_ID "dm_062_GS_dna_1"
Adh MAGPIE promotor 2749548 2749587 . + 2 MAGPIE_ID "dm_062_GS_dna_2"
Adh MAGPIE exon 2749658 2749696 0.282 + 1 MAGPIE_ID "dm_062_GS_dna_2" #dm_062_GS_2.01
Adh blastx similarity 2749850 2750011 2e-27 + 1 MAGPIE_CTG "dm_062" #SpZ12-1 [Strongylocentrotus purpuratus]
Adh calypso tandemrepeat 2750506 2750520 . + 0 MAGPIE_CTG "dm_062" # 5 x GAT
Adh MAGPIE exon 2749753 2750868 0.885 + 0 MAGPIE_ID "dm_062_GS_dna_2" #dm_062_GS_2.02
Adh MAGPIE gene 2749658 2750868 1 - 2 MAGPIE_ID "dm_062_GS_dna_2" # DE zinc finger protein - human;ST putative;TY single function;CC No exact matches in DRosophila;
Adh MAGPIE polyA_signal 2750996 2751001 . + 1 MAGPIE_ID "dm_062_GS_dna_2"
Adh MAGPIE polyA_signal 2751189 2751194 . - 0 MAGPIE_ID "dm_062_GS_dna_3"
Adh MAGPIE exon 2751337 2751465 0.976 - 2 MAGPIE_ID "dm_062_GS_dna_3" #dm_062_GS_3.02
Adh MAGPIE exon 2751521 2751736 0.450 - 1 MAGPIE_ID "dm_062_GS_dna_3" #dm_062_GS_3.01
Adh MAGPIE gene 2751337 2751736 1 - 1 MAGPIE_ID "dm_062_GS_dna_3" # DE glia maturation factor - human (142 aa);ST putative;TY single function;CC Exact match to drosophila cDNA.;
Adh calypso tandemrepeat 2751945 2751962 . + 2 MAGPIE_CTG "dm_062" # 3 x AAAAAC
Adh MAGPIE promotor 2752111 2752150 . - 1 MAGPIE_ID "dm_062_GS_dna_3"
Adh MAGPIE promotor 2752403 2752442 . + 1 MAGPIE_ID "dm_062_GS_dna_4"
Adh MAGPIE exon 2752612 2752742 0.999 + 0 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.01
Adh MAGPIE exon 2752822 2752985 0.999 + 0 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.02
Adh MAGPIE exon 2753042 2753322 0.768 + 1 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.03
Adh MAGPIE exon 2753382 2753565 0.989 + 2 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.04
Adh MAGPIE exon 2753620 2754004 0.994 + 0 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.05
Adh MAGPIE exon 2754057 2754364 0.721 + 2 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.06
Adh MAGPIE exon 2754423 2754595 0.697 + 2 MAGPIE_ID "dm_062_GS_dna_4" #dm_062_GS_4.07
Adh MAGPIE gene 2752612 2754595 1 - 1 MAGPIE_ID "dm_062_GS_dna_4" # DE GM03132.5prime GM EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2754993 2754998 . + 2 MAGPIE_ID "dm_062_GS_dna_4"
Adh MAGPIE polyA_signal 2755003 2755008 . - 2 MAGPIE_ID "dm_062_GS_dna_5"
Adh MAGPIE exon 2755219 2755580 0.997 - 0 MAGPIE_ID "dm_062_GS_dna_5" #dm_062_GS_5.03
Adh MAGPIE exon 2755775 2755883 0.940 - 0 MAGPIE_ID "dm_062_GS_dna_5" #dm_062_GS_5.02
Adh MAGPIE exon 2755954 2756022 0.867 - 2 MAGPIE_ID "dm_062_GS_dna_5" #dm_062_GS_5.01
Adh MAGPIE gene 2755219 2756022 1 - 2 MAGPIE_ID "dm_062_GS_dna_5" # DE seven transmembrane - human (224 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 2756096 2756135 . - 0 MAGPIE_ID "dm_062_GS_dna_5"
Adh MAGPIE promotor 2756207 2756246 . + 1 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE start_codon 2757391 2757393 . + 0 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE CDS 2757391 2757589 . + 0 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE splice5 2757589 2757590 . + 0 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE splice3 2757657 2757658 . + 2 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE CDS 2757658 2758391 . + 0 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE gene 2757391 2758391 1 + 0 MAGPIE_ID "dm_062_MP_dna_6" # GN sed5;DE sed5 protein - fruit fly (310 aa);ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 2758514 2758519 . + 1 MAGPIE_ID "dm_062_MP_dna_6"
Adh MAGPIE stop_codon 2759163 2759165 . - 0 MAGPIE_ID "dm_062_MP_dna_7a" #
Adh MAGPIE CDS 2759163 2759190 . - 2 MAGPIE_ID "dm_062_MP_dna_7a" #CORNICHON PROTEIN; negative strand overlap of dm_062_MP_dna_7.
Adh MAGPIE promotor 2759260 2759299 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE CDS 2759260 2759403 . - 2 MAGPIE_ID "dm_062_MP_dna_7a" #CORNICHON PROTEIN; negative strand overlap of dm_062_MP_dna_7.
Adh MAGPIE CDS 2759527 2759639 . - 0 MAGPIE_ID "dm_062_MP_dna_7a" #CORNICHON PROTEIN; negative strand overlap of dm_062_MP_dna_7.
Adh MAGPIE CDS 2759701 2759850 . - 2 MAGPIE_ID "dm_062_MP_dna_7a" #CORNICHON PROTEIN; negative strand overlap of dm_062_MP_dna_7.
Adh MAGPIE gene 2759163 2759850 . - 2 MAGPIE_ID "dm_062_MP_dna_7a" #CORNICHON PROTEIN; negative strand overlap of dm_062_MP_dna_7.
Adh MAGPIE start_codon 2759848 2759850 . - 2 MAGPIE_ID "dm_062_MP_dna_7a" #
Adh MAGPIE start_codon 2760361 2760363 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE CDS 2760361 2760672 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE splice5 2760672 2760673 . + 2 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE splice3 2760765 2760766 . + 2 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE CDS 2760766 2761087 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE splice5 2761087 2761088 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh calypso tandemrepeat 2761103 2761117 . + 1 MAGPIE_CTG "dm_062" # 3 x CTTTT
Adh MAGPIE splice3 2761140 2761141 . + 2 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE CDS 2761141 2762087 . + 0 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE gene 2760361 2762087 1 + 0 MAGPIE_ID "dm_062_MP_dna_7" # GN fizzy;DE fizzy protein;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 2762339 2762344 . + 1 MAGPIE_ID "dm_062_MP_dna_7"
Adh MAGPIE polyA_signal 2762373 2762378 . - 0 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE CDS 2763693 2763968 . - 0 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice5 2763968 2763969 . - 2 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice3 2764029 2764030 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE CDS 2764030 2764118 . - 0 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice5 2764118 2764119 . - 2 MAGPIE_ID "dm_062_MP_dna_8"
Adh calypso tandemrepeat 2768806 2768823 . + 0 MAGPIE_CTG "dm_062" # 6 x CTA
Adh MAGPIE splice3 2772219 2772220 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE CDS 2772220 2772430 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice5 2772430 2772431 . - 0 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice3 2772599 2772600 . - 2 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE CDS 2772600 2772777 . - 2 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice5 2772777 2772778 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE splice3 2773592 2773593 . - 2 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE CDS 2773593 2774287 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE gene 2763693 2774287 1 - 1 MAGPIE_ID "dm_062_MP_dna_8" # GN cactus;DE cactus phosphoprotein;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE start_codon 2774285 2774287 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE promotor 2774767 2774806 . - 1 MAGPIE_ID "dm_062_MP_dna_8"
Adh MAGPIE promotor 2775824 2775863 . + 1 MAGPIE_ID "dm_062_GS_dna_9"
Adh MAGPIE exon 2776429 2777295 0.919 + 0 MAGPIE_ID "dm_062_GS_dna_9" #dm_062_GS_9.01
Adh MAGPIE gene 2776429 2777295 1 - 2 MAGPIE_ID "dm_062_GS_dna_9" # DE yeast ngg1-interacting factor 3 (278 aa);ST putative;TY single function;CC Exact match to Drosophila cDNA.;
Adh MAGPIE polyA_signal 2777359 2777364 . + 0 MAGPIE_ID "dm_062_GS_dna_9"
Adh MAGPIE exon 2777390 2777609 0.989 - 0 MAGPIE_ID "dm_062_GS_dna_10" #dm_062_GS_10.02
Adh MAGPIE exon 2777672 2778342 0.998 - 2 MAGPIE_ID "dm_062_GS_dna_10" #dm_062_GS_10.01
Adh MAGPIE gene 2777390 2778342 1 - 2 MAGPIE_ID "dm_062_GS_dna_10" # DE LD33485.5prime LD EST drosophila;ST putative;TY single function;CC Ribosomal protein L?;
Adh MAGPIE exon 2779883 2785491 0.976 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.12
Adh MAGPIE exon 2785552 2786724 0.999 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.11
Adh MAGPIE exon 2786788 2787069 0.001 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.10
Adh MAGPIE exon 2787432 2787885 0.061 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.09
Adh MAGPIE exon 2787948 2788341 0.995 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.08
Adh MAGPIE exon 2788407 2788474 0.013 - 1 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.07
Adh MAGPIE exon 2788569 2788684 0.007 - 1 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.06
Adh MAGPIE exon 2788808 2789082 0.449 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.05
Adh MAGPIE exon 2789143 2789471 0.347 - 0 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.04
Adh MAGPIE exon 2789812 2791516 0.017 - 1 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.03
Adh MAGPIE exon 2790007 2791516 0.116 - 1 MAGPIE_ID "dm_063_GS_dna_1" #dm_063_GS_1.03
Adh MAGPIE exon 2791870 2792011 0.027 - 1 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.02
Adh MAGPIE exon 2791870 2792011 0.116 - 1 MAGPIE_ID "dm_063_GS_dna_1" #dm_063_GS_1.02
Adh MAGPIE exon 2792082 2792601 0.999 - 2 MAGPIE_ID "dm_062_GS_dna_12" #dm_062_GS_12.01
Adh MAGPIE exon 2792082 2792601 0.999 - 2 MAGPIE_ID "dm_063_GS_dna_1" #dm_063_GS_1.01
Adh MAGPIE gene 2779883 2792601 1 - 2 MAGPIE_ID "dm_062_GS_dna_12" # DE GH02859.3prime GH EST drosophila;ST putative;TY single function;CC Strong match to EST; other matches are to Proline-rich proteins;
Adh MAGPIE gene 2790007 2792601 . - 2 MAGPIE_ID "dm_063_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2792876 2792890 . + 1 MAGPIE_CTG "dm_062" # 3 x ATTTA
Adh calypso tandemrepeat 2792876 2792890 . + 1 MAGPIE_CTG "dm_063" # 3 x ATTTA
Adh MAGPIE promotor 2792871 2792910 . - 2 MAGPIE_ID "dm_063_GS_dna_1"
Adh MAGPIE polyA_signal 2792980 2792985 . - 2 MAGPIE_ID "dm_063_GS_dna_2"
Adh MAGPIE exon 2793626 2794950 0.530 - 2 MAGPIE_ID "dm_062_GS_dna_13" #dm_062_GS_13.01
Adh MAGPIE gene 2793626 2794950 1 - 2 MAGPIE_ID "dm_062_GS_dna_13" # DE GM06264.5prime GM EST drosophila;ST putative;TY single function;
Adh MAGPIE exon 2793626 2798713 0.998 - 1 MAGPIE_ID "dm_063_GS_dna_2" #dm_063_GS_2.01
Adh MAGPIE gene 2793626 2798713 1 - 1 MAGPIE_ID "dm_063_GS_dna_2" # DE GM12481.5prime GM EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE promotor 2800161 2800200 . - 2 MAGPIE_ID "dm_063_GS_dna_2"
Adh MAGPIE promotor 2800514 2800553 . + 1 MAGPIE_ID "dm_063_GS_dna_3"
Adh MAGPIE exon 2800793 2800913 0.911 + 1 MAGPIE_ID "dm_063_GS_dna_3" #dm_063_GS_3.01
Adh MAGPIE exon 2802395 2802813 0.966 + 1 MAGPIE_ID "dm_063_GS_dna_3" #dm_063_GS_3.02
Adh MAGPIE gene 2800793 2802813 1 - 2 MAGPIE_ID "dm_063_GS_dna_3" # DE LD36923.5prime LD EST drosophila;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2803778 2803783 . + 1 MAGPIE_ID "dm_063_GS_dna_3"
Adh MAGPIE polyA_signal 2803821 2803826 . - 0 MAGPIE_ID "dm_063_GS_dna_4"
Adh MAGPIE exon 2804442 2805730 0.918 - 1 MAGPIE_ID "dm_063_GS_dna_4" #dm_063_GS_4.02
Adh MAGPIE exon 2805800 2805812 0.816 - 0 MAGPIE_ID "dm_063_GS_dna_4" #dm_063_GS_4.01
Adh MAGPIE gene 2804442 2805812 1 - 0 MAGPIE_ID "dm_063_GS_dna_4" # DE putative C. elegans disulfide isomerase (440 aa);ST putative;TY single function;CC No exact match in Drosophila;
Adh MAGPIE promotor 2807721 2807760 . - 2 MAGPIE_ID "dm_063_GS_dna_4"
Adh calypso tandemrepeat 2808106 2808120 . + 0 MAGPIE_CTG "dm_063" # 15 x T
Adh calypso tandemrepeat 2809579 2809596 . + 0 MAGPIE_CTG "dm_063" # 9 x TG
Adh MAGPIE promotor 2815129 2815168 . + 0 MAGPIE_ID "dm_063_GS_dna_5"
Adh MAGPIE exon 2815178 2815829 0.991 + 1 MAGPIE_ID "dm_063_GS_dna_5" #dm_063_GS_5.01
Adh MAGPIE exon 2815894 2816001 0.277 + 0 MAGPIE_ID "dm_063_GS_dna_5" #dm_063_GS_5.02
Adh calypso tandemrepeat 2816555 2816570 . + 1 MAGPIE_CTG "dm_063" # 4 x CATA
Adh MAGPIE exon 2820072 2820194 0.602 + 2 MAGPIE_ID "dm_063_GS_dna_5" #dm_063_GS_5.03
Adh calypso tandemrepeat 2820882 2820899 . + 2 MAGPIE_CTG "dm_063" # 6 x GTC
Adh MAGPIE exon 2820862 2820926 0.337 + 0 MAGPIE_ID "dm_063_GS_dna_5" #dm_063_GS_5.04
Adh MAGPIE gene 2815178 2820926 2 - 0 MAGPIE_ID "dm_063_GS_dna_5" # DE est190 manduca sexta male antennae;ST putative;TY single function;CC Only EST matches.;
Adh MAGPIE polyA_signal 2821425 2821430 . + 2 MAGPIE_ID "dm_063_GS_dna_5"
Adh MAGPIE polyA_signal 2821543 2821548 . - 2 MAGPIE_ID "dm_063_GS_dna_6"
Adh MAGPIE exon 2824416 2824622 0.723 - 0 MAGPIE_ID "dm_063_GS_dna_6" #dm_063_GS_6.01
Adh MAGPIE gene 2824416 2824622 . - 0 MAGPIE_ID "dm_063_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2826941 2826980 . - 0 MAGPIE_ID "dm_063_GS_dna_6"
Adh MAGPIE polyA_signal 2827045 2827050 . - 2 MAGPIE_ID "dm_063_GS_dna_7"
Adh calypso tandemrepeat 2827525 2827540 . + 0 MAGPIE_CTG "dm_063" # 8 x AC
Adh MAGPIE exon 2827707 2827908 0.949 - 2 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.11
Adh MAGPIE exon 2829637 2829731 0.991 - 0 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.10
Adh MAGPIE exon 2829951 2830165 0.024 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.09
Adh MAGPIE exon 2831482 2831676 0.020 - 2 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.08
Adh MAGPIE exon 2831700 2831950 0.028 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.07
Adh MAGPIE exon 2833489 2833753 0.030 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.06
Adh calypso tandemrepeat 2835091 2835108 . + 0 MAGPIE_CTG "dm_063" # 18 x T
Adh calypso tandemrepeat 2835091 2835108 . + 0 MAGPIE_CTG "dm_064" # 18 x T
Adh MAGPIE exon 2836812 2836843 0.020 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.05
Adh calypso tandemrepeat 2837281 2837300 . + 0 MAGPIE_CTG "dm_063" # 5 x CAGC
Adh calypso tandemrepeat 2837281 2837300 . + 0 MAGPIE_CTG "dm_064" # 5 x CAGC
Adh MAGPIE exon 2837445 2837627 0.425 + 2 MAGPIE_ID "dm_064_GS_dna_1" #dm_064_GS_1.01
Adh MAGPIE exon 2837417 2837676 0.059 - 2 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.04
Adh MAGPIE exon 2837705 2837761 0.206 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.03
Adh MAGPIE exon 2838064 2838226 0.428 - 1 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.02
Adh MAGPIE exon 2838730 2838822 0.517 - 2 MAGPIE_ID "dm_063_GS_dna_7" #dm_063_GS_7.01
Adh MAGPIE gene 2827707 2838822 . - 2 MAGPIE_ID "dm_063_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE exon 2840422 2840655 0.246 + 0 MAGPIE_ID "dm_064_GS_dna_1" #dm_064_GS_1.02
Adh MAGPIE exon 2841156 2841390 0.462 + 2 MAGPIE_ID "dm_064_GS_dna_1" #dm_064_GS_1.03
Adh MAGPIE exon 2842430 2842744 0.239 + 1 MAGPIE_ID "dm_064_GS_dna_1" #dm_064_GS_1.04
Adh MAGPIE exon 2843232 2843386 0.401 + 2 MAGPIE_ID "dm_064_GS_dna_1" #dm_064_GS_1.05
Adh MAGPIE gene 2837445 2843386 1 + 2 MAGPIE_ID "dm_064_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2843866 2843871 . + 0 MAGPIE_ID "dm_064_GS_dna_1"
Adh MAGPIE polyA_signal 2844681 2844686 . - 0 MAGPIE_ID "dm_064_GS_dna_2"
Adh MAGPIE exon 2844829 2845138 0.393 - 1 MAGPIE_ID "dm_064_GS_dna_2" #dm_064_GS_2.02
Adh MAGPIE exon 2846003 2846091 0.891 - 2 MAGPIE_ID "dm_064_GS_dna_2" #dm_064_GS_2.01
Adh MAGPIE gene 2844829 2846091 1 + 0 MAGPIE_ID "dm_064_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2846179 2846218 . - 1 MAGPIE_ID "dm_064_GS_dna_2"
Adh MAGPIE promotor 2847886 2847925 . + 0 MAGPIE_ID "dm_064_GS_dna_3"
Adh MAGPIE exon 2848166 2848283 0.707 + 1 MAGPIE_ID "dm_064_GS_dna_3" #dm_064_GS_3.01
Adh calypso tandemrepeat 2850284 2850307 . + 1 MAGPIE_CTG "dm_064" # 4 x AGTGCA
Adh MAGPIE exon 2851811 2851936 0.786 + 1 MAGPIE_ID "dm_064_GS_dna_3" #dm_064_GS_3.02
Adh MAGPIE exon 2852313 2852590 0.967 + 2 MAGPIE_ID "dm_064_GS_dna_3" #dm_064_GS_3.03
Adh MAGPIE gene 2848166 2852590 1 + 1 MAGPIE_ID "dm_064_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2852691 2852696 . + 2 MAGPIE_ID "dm_064_GS_dna_3"
Adh MAGPIE polyA_signal 2853619 2853624 . - 2 MAGPIE_ID "dm_064_GS_dna_4"
Adh MAGPIE exon 2853736 2854099 0.990 - 1 MAGPIE_ID "dm_064_GS_dna_4" #dm_064_GS_4.04
Adh MAGPIE exon 2854197 2855213 0.494 - 0 MAGPIE_ID "dm_064_GS_dna_4" #dm_064_GS_4.03
Adh MAGPIE exon 2855254 2855387 0.365 - 0 MAGPIE_ID "dm_064_GS_dna_4" #dm_064_GS_4.02
Adh calypso tandemrepeat 2856339 2856363 . + 2 MAGPIE_CTG "dm_064" # 5 x GGTAT
Adh MAGPIE exon 2856104 2856535 0.444 - 1 MAGPIE_ID "dm_064_GS_dna_4" #dm_064_GS_4.01
Adh MAGPIE gene 2853736 2856535 1 + 0 MAGPIE_ID "dm_064_GS_dna_4" # DE Toll protein homologue;ST putative;TY single function;CC Level 2 match in Drosophila. Paralogue?;
Adh MAGPIE promotor 2857146 2857185 . - 2 MAGPIE_ID "dm_064_GS_dna_4"
Adh MAGPIE polyA_signal 2857456 2857461 . - 2 MAGPIE_ID "dm_064_GS_dna_5"
Adh fstdmEST exon 2859735 2859886 100 + 2 MAGPIE_CTG "dm_064" #100% identical to EST GH08155.5prime AI108855
Adh MAGPIE exon 2860250 2860489 0.951 - 1 MAGPIE_ID "dm_064_GS_dna_5" #dm_064_GS_5.01
Adh MAGPIE gene 2860250 2860489 1 + 1 MAGPIE_ID "dm_064_GS_dna_5" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2862524 2862563 . - 0 MAGPIE_ID "dm_064_GS_dna_5"
Adh MAGPIE promotor 2862840 2862879 . + 2 MAGPIE_ID "dm_064_GS_dna_6"
Adh calypso tandemrepeat 2862930 2862950 . + 2 MAGPIE_CTG "dm_064" # 7 x CAA
Adh MAGPIE exon 2862924 2863295 0.054 + 2 MAGPIE_ID "dm_064_GS_dna_6" #dm_064_GS_6.01
Adh MAGPIE exon 2868689 2868910 0.029 + 1 MAGPIE_ID "dm_064_GS_dna_6" #dm_064_GS_6.02
Adh MAGPIE gene 2862924 2868910 1 + 2 MAGPIE_ID "dm_064_GS_dna_6" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2869152 2869157 . + 2 MAGPIE_ID "dm_064_GS_dna_6"
Adh MAGPIE promotor 2869573 2869612 . + 0 MAGPIE_ID "dm_064_GS_dna_7"
Adh MAGPIE exon 2870618 2870720 0.447 + 1 MAGPIE_ID "dm_064_GS_dna_7" #dm_064_GS_7.01
Adh MAGPIE exon 2871302 2871404 0.610 + 1 MAGPIE_ID "dm_064_GS_dna_7" #dm_064_GS_7.02
Adh MAGPIE exon 2877379 2877553 0.334 + 0 MAGPIE_ID "dm_064_GS_dna_7" #dm_064_GS_7.03
Adh MAGPIE gene 2870618 2877553 1 + 1 MAGPIE_ID "dm_064_GS_dna_7" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2877733 2877738 . + 0 MAGPIE_ID "dm_064_GS_dna_7"
Adh calypso tandemrepeat 2879944 2879958 . + 0 MAGPIE_CTG "dm_064" # 3 x TGGGG
Adh MAGPIE promotor 2880210 2880249 . + 2 MAGPIE_ID "dm_064_GS_dna_8"
Adh calypso tandemrepeat 2880477 2880492 . + 2 MAGPIE_CTG "dm_064" # 4 x TATG
Adh calypso tandemrepeat 2880477 2880492 . + 2 MAGPIE_CTG "dm_065" # 4 x TATG
Adh MAGPIE exon 2881476 2881811 0.975 + 2 MAGPIE_ID "dm_065_GS_dna_1" #dm_065_GS_1.01
Adh MAGPIE exon 2881476 2881811 0.985 + 2 MAGPIE_ID "dm_064_GS_dna_8" #dm_064_GS_8.01
Adh MAGPIE gene 2881476 2881811 . + 2 MAGPIE_ID "dm_064_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2881476 2881811 . + 2 MAGPIE_ID "dm_065_GS_dna_1" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2881818 2881823 . + 2 MAGPIE_ID "dm_064_GS_dna_8"
Adh MAGPIE polyA_signal 2881818 2881823 . + 2 MAGPIE_ID "dm_065_GS_dna_1"
Adh MAGPIE promotor 2881930 2881969 . + 0 MAGPIE_ID "dm_064_GS_dna_9"
Adh MAGPIE promotor 2881930 2881969 . + 0 MAGPIE_ID "dm_065_GS_dna_2"
Adh MAGPIE exon 2882072 2882405 0.760 + 1 MAGPIE_ID "dm_064_GS_dna_9" #dm_064_GS_9.01
Adh MAGPIE exon 2882072 2882405 0.761 + 1 MAGPIE_ID "dm_065_GS_dna_2" #dm_065_GS_2.01
Adh MAGPIE exon 2883602 2883864 0.882 + 1 MAGPIE_ID "dm_064_GS_dna_9" #dm_064_GS_9.02
Adh MAGPIE exon 2883602 2883864 0.883 + 1 MAGPIE_ID "dm_065_GS_dna_2" #dm_065_GS_2.02
Adh MAGPIE gene 2882072 2883864 1 + 1 MAGPIE_ID "dm_064_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE gene 2882072 2883864 1 + 1 MAGPIE_ID "dm_065_GS_dna_2" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2883982 2883987 . + 0 MAGPIE_ID "dm_064_GS_dna_9"
Adh MAGPIE polyA_signal 2883982 2883987 . + 0 MAGPIE_ID "dm_065_GS_dna_2"
Adh calypso tandemrepeat 2884248 2884267 . + 2 MAGPIE_CTG "dm_064" # 4 x AAGTT
Adh calypso tandemrepeat 2884248 2884267 . + 2 MAGPIE_CTG "dm_065" # 4 x AAGTT
Adh MAGPIE polyA_signal 2884356 2884361 . - 0 MAGPIE_ID "dm_065_GS_dna_3"
Adh MAGPIE exon 2886321 2886429 0.897 - 2 MAGPIE_ID "dm_065_GS_dna_3" #dm_065_GS_3.02
Adh MAGPIE exon 2886895 2887013 0.908 - 0 MAGPIE_ID "dm_065_GS_dna_3" #dm_065_GS_3.01
Adh MAGPIE gene 2886321 2887013 1 + 2 MAGPIE_ID "dm_065_GS_dna_3" # DE hypothetical;ST putative;TY hypothetical;
Adh calypso tandemrepeat 2887608 2887625 . + 2 MAGPIE_CTG "dm_065" # 9 x TA
Adh calypso tandemrepeat 2888564 2888578 . + 1 MAGPIE_CTG "dm_065" # 3 x TGAAC
Adh calypso tandemrepeat 2888711 2888726 . + 1 MAGPIE_CTG "dm_065" # 8 x GT
Adh MAGPIE promotor 2889961 2890000 . - 1 MAGPIE_ID "dm_065_GS_dna_3"
Adh MAGPIE polyA_signal 2890097 2890102 . - 1 MAGPIE_ID "dm_065_GS_dna_4"
Adh MAGPIE exon 2892477 2892704 0.549 - 0 MAGPIE_ID "dm_065_GS_dna_4" #dm_065_GS_4.02
Adh calypso tandemrepeat 2892926 2892940 . + 1 MAGPIE_CTG "dm_065" # 3 x GTATT
Adh MAGPIE exon 2893582 2893668 0.794 - 2 MAGPIE_ID "dm_065_GS_dna_4" #dm_065_GS_4.01
Adh MAGPIE gene 2892477 2893668 1 + 2 MAGPIE_ID "dm_065_GS_dna_4" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE promotor 2894049 2894088 . - 2 MAGPIE_ID "dm_065_GS_dna_4"
Adh MAGPIE promotor 2894329 2894368 . + 0 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE start_codon 2894587 2894589 . + 0 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE CDS 2894587 2895247 . + 0 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE splice5 2895247 2895248 . + 0 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE splice3 2895318 2895319 . + 2 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE CDS 2895319 2895977 . + 0 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE gene 2894587 2895977 1 + 0 MAGPIE_ID "dm_065_MP_dna_5" # GN Idgf1;EC 3.2.1.14;DE imaginal Disc growth factor 1;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 2896025 2896030 . + 1 MAGPIE_ID "dm_065_MP_dna_5"
Adh MAGPIE promotor 2896265 2896304 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE start_codon 2896655 2896657 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE CDS 2896655 2896763 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE splice5 2896763 2896764 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE splice3 2898443 2898444 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE CDS 2898444 2899001 . + 2 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE splice5 2899001 2899002 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE splice3 2899060 2899061 . + 0 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE CDS 2899061 2899716 . + 1 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE gene 2896655 2899716 1 + 1 MAGPIE_ID "dm_065_MP_dna_6" # GN Idgf2;EC 3.2.1.14;DE imaginal Disc growth factor 2;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE polyA_signal 2899743 2899748 . + 2 MAGPIE_ID "dm_065_MP_dna_6"
Adh MAGPIE promotor 2899795 2899834 . + 0 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE start_codon 2900448 2900450 . + 2 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE CDS 2900448 2900565 . + 2 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE splice5 2900565 2900566 . + 2 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE splice3 2900633 2900634 . + 1 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE CDS 2900634 2901185 . + 2 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE splice5 2901185 2901186 . + 1 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE splice3 2901451 2901452 . + 0 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE CDS 2901452 2902107 . + 1 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE gene 2900448 2902107 1 + 2 MAGPIE_ID "dm_065_MP_dna_7" # GN Idgf3;EC 3.2.1.14;DE imaginal Disc growth factor 3;ST putative;TY single function;CC Look at FlyBase entry.;
Adh MAGPIE stop_codon 2902105 2902107 . + 0 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE polyA_signal 2904429 2904434 . + 2 MAGPIE_ID "dm_065_MP_dna_7"
Adh MAGPIE promotor 2905800 2905839 . + 2 MAGPIE_ID "dm_065_GS_dna_8"
Adh calypso tandemrepeat 2907781 2907795 . + 0 MAGPIE_CTG "dm_065" # 15 x A
Adh MAGPIE exon 2908693 2909016 0.848 + 0 MAGPIE_ID "dm_065_GS_dna_8" #dm_065_GS_8.01
Adh MAGPIE gene 2908693 2909016 1 + 0 MAGPIE_ID "dm_065_GS_dna_8" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2909239 2909244 . + 0 MAGPIE_ID "dm_065_GS_dna_8"
Adh MAGPIE promotor 2909912 2909951 . + 1 MAGPIE_ID "dm_065_GS_dna_9"
Adh MAGPIE exon 2911056 2911181 0.838 + 2 MAGPIE_ID "dm_065_GS_dna_9" #dm_065_GS_9.01
Adh calypso tandemrepeat 2913083 2913097 . + 1 MAGPIE_CTG "dm_065" # 5 x CAA
Adh calypso tandemrepeat 2913104 2913121 . + 1 MAGPIE_CTG "dm_065" # 6 x CAA
Adh MAGPIE exon 2912991 2913284 0.821 + 2 MAGPIE_ID "dm_065_GS_dna_9" #dm_065_GS_9.02
Adh MAGPIE gene 2911056 2913284 1 + 2 MAGPIE_ID "dm_065_GS_dna_9" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE polyA_signal 2913580 2913585 . + 0 MAGPIE_ID "dm_065_GS_dna_9"
Adh MAGPIE exon 2913888 2914123 0.508 - 1 MAGPIE_ID "dm_065_GS_dna_10" #dm_065_GS_10.03
Adh calypso tandemrepeat 2914705 2914728 . + 0 MAGPIE_CTG "dm_065" # 12 x AT
Adh MAGPIE exon 2914738 2914949 0.312 - 0 MAGPIE_ID "dm_065_GS_dna_10" #dm_065_GS_10.02
Adh MAGPIE exon 2914999 2915129 0.173 - 0 MAGPIE_ID "dm_065_GS_dna_10" #dm_065_GS_10.01
Adh MAGPIE gene 2913888 2915129 1 + 2 MAGPIE_ID "dm_065_GS_dna_10" # DE hypothetical;ST putative;TY hypothetical;
Adh MAGPIE CDS 2916879 2917012 . - 1 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice5 2917012 2917013 . - 0 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice3 2917310 2917311 . - 2 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE CDS 2917311 2917504 . - 1 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice5 2917504 2917505 . - 0 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice3 2917750 2917751 . - 0 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE CDS 2917751 2917988 . - 0 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice5 2917988 2917989 . - 2 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE splice3 2918252 2918253 . - 2 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE CDS 2918253 2918513 . - 0 MAGPIE_ID "dm_065_MP_dna_11"
Adh MAGPIE gene 2916879 2918513 1 - 0 MAGPIE_ID "dm_065_MP_dna_11" # GN dachshund;DE dachshund nuclear protein;ST putative;TY single function;CC Look at FlyBase entry.;