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2nd Chromosome: Source Canton S vs Oregon R Click [HERE] to view Table Legend STS Cytological Location Flanking Sequence Nucleotide Position CSiso2 ORiso2 Dm0349 21C GTGCTTTTTT--GGGCAAAACG 139InDel TT 17/-   Dm0291 22A CAGGTATTTC-TTTAGATGGA 41K G 37/- T 31/-   22A TTAGATGGAA-TAATTCATTA 53Y T 34/- C 29/-   22A AATATTCCTG-GTAGTGCCTT 125W T 40/- A 36/- Dm2300 22E TAATTTCGCT-GCCATTAGCA 136R A 37/27 G 40/29   22E GACAAAAATC-TTGGCAAATC 176K T 56/35 G 56/38 Dm2641 22F TTCATGGCCA-CGGCTTCTCG 190R A 40/- G 35/- Dm0678 23A AGTTTTCAAC_GTTCTGTCAG 318R A 56/43 G 56/45 Dm0587 23B GTTCCCGCTC-CGTTCTCGCT 226Y C 51/47 T 51/25   23B GCTCCCTGTC-CG_TCTCGTT 244M C 46/4 A 45/30   23B CCCTGTC_CG-TCTCGTTCCT 247R G 56/24 A 42/40   23B GTTCCTGCTT-AGCTGGAACT 262Y C 46/- T 40/- Dm0605 23E AAGAGAGCAA-GGAGAGAGAC 145R G 56/29 A 56/22 Dm0611 23E CTGGTACAAA-A_CTTTATCT 133W T 45/40 A 45/56   23E GGTACAAA_A-CTTTATCTTG 135S G 40/40 C 40/42   23E TATGTGCCAC--CAGTTGAGAA 155YS CC 51/51 TG 45/17 Dm2829 23F TGGCGGGTAA-CA_T_AAG__ 111R A 56/42 G 56/56   23F CGGGTAA_CA-T_AAG___GA 114W A 51/46 T 56/56   23F GGTAA_CA_T-AAG___GATT 116K T 51/51 G 56/45   23F A_CA_T_AAG---GA__CCTCCA 120WRK AAG 56/44 TGT 51/45   23F T_AAG___GA--CCTC__AGA_ 125YY TT 56/42 CC 40/56   23F __GA__CCTC--AGA__TCCTT 131YR CA 43/56 TG 42/40   23F _CCTC__AGA--T_CTTTCTGA 136WW TT 51/48 AA 45/56   23F TC__AGA__T-CTTTCTGAAA 139Y C 56/56 T 56/56   23F CTGAAACGAT-CCTTTCAGTT 154W T 56/33 A 45/56   23F CAGTTAAGAG-CCCTT_GATC 170Y T 56/37 C 51/45   23F AGAG_CCCTT-GATCCCTCGA 176Y T 56/35 C 56/42 Dm0294 24E TAAGAGGAAA-CATTAAAATA 212Y T 51/- C 37/-   24E AATAATCGAA-GAAGGTTATC 237K T 56/- G 22/- Dm0532 24E TTGGGAAACA-ATTTTAAATT 251M A 56/- C 56/- Dm2811 24E GACACCATTC-CCCAGATACT 245Y C 51/- T 56/- Dm0555 25A ACACTGCCCA-GACAGAACTG 49Y C 18/40 T 26/51   25A TTGGCCAAAT-CTGAACATTG 131R A 40/40 G 51/40 Dm0569 25A CTGGCTCTTG-GCCTGCCTGC 204Y C 56/40 T 51/56   25A GCCAGGATCC-TGTCCCGGAG 318W A 51/- T 56/37   25A GTCCCGGAGC-TGCGGCATCA 330M A 56/- C 46/20   25A GCGGCATCAA-GCTGAGTGCA 342Y T 51/- C 40/- Dm2235 25A GATATGTAAT-ATTGTAGCCT 88W T 35/- A 40/- Dm0163 25C CTACGATGAT-TGGTTAGCTG 170Y C 28/37 T 4/40   25C ATTCCCTTCG-TGAAGCAGAG 212Y C 51/40 T 13/45   25C CCATTGAAAA-GCTGTCCAAG 253Y T 56/45 C 32/56 Dm3172 25D TTATGTTTTT-ATGTTTAAGT 76R A 56/- G 33/- Dm0537 26A TGCGCTTCTG-CCCGCCACGG 57R G 26/13 A 27/29   26A GGAAAACTCA-AAGATAGTTT 152R G 46/15 A 56/46 Dm3376 26C TATTGGAAAG-GGCTTTAATG 185M A 56/- C 27/- Dm2207 26D TCATCTCTTC-GT_TAGTTGG 145K T 56/12 G 56/40   26D TCTCTTC_GT-TAGTTGGCAT 148R A 56/20 G 51/44   26D GAATGCGTCC-AGACGATCCA 175Y C 51/29 T 51/25 Dm2089 26F AGTCGCTGCC-CCTGCCGAGC 116R A 44/35 G 40/40 Dm2599 26F CAAGCACAAT-TCAATACTCC 135M A 56/- C 56/42 Dm0342 27C TTTCCTAACA-GTAATTTTGA 162W T 51/42 A 24/33   27C TATTTAAATA-AAGCATAAGT 315K G 40/- T 42/- Dm3015 28F ACACGTGTTT-AAAGTCTTGC 138R G 47/56 A 44/56   28F CTACAAACAC-CGGTTCGAGG 171W A 56/45 T 39/24   28F AGCAACAACC-GGTGCAACAA 195W A 30/32 T 31/8 Dm2925 29A AATACAATTT-CATTTATTAT 156Y T 56/48 C 56/56 Dm3802 29C CAGAAAACAA-AGCTTTGCGA 168R G 44/11 A 42/30 Dm2812 29F TCCCTCCCCC-CTCCT__CCA 148InDel   T 56/44   29F CCCC_CTCCT--CCAGCC__CC 154YS TC 44/47 CG 40/40   29F CT__CCAGCC--CCCCTTCCAA 162MW AT 40/51 CA 45/56 Dm2670 2R GGAAAACTCT-GCTGTCGCCT 31R G -/40 A -/40   2R CGTTGTCGTC-GCAGCAACAT 132W T 27/11 A 12/18 Dm0434 30A CCTTTTTTTT-AAAACATATT 76W T 35/- A 35/-   30A TCTATAGGCA-AAAAAAAAAA 119M C 47/- A 56/- Dm2818 30A AGACCAAGCA-ATGTAATAAA 76W A 36/51 T37/56 Dm0641 31A CCGCTTATGC-GGGATGCACG 205W A 42/40 T 56/34   31A AGCAGGGATG-AGGAGGATTG 228Y C 56/46 T 43/42   31A TGGAACCCAG-ACCGATCT__ 311Y C 59/27 T 46/29   31A G_ACCGATCT------TGTGGCGCTCA 320InDel   CCGGCA 42/24 Dm2073 31B CTTAGCCGAG-GTCCTG_TTC 166W T 9/35 A 13/40   31B GAG_GTCCTG-TTCTGGAAAA 173R G 29/35 A 32/42   31B AAAGCAGAAA-GAGA_CAA_A 222R A 51/56 G 56/47   31B AGAAA_GAGA-CAA_AGCAGA 227S C 35/42 G 56/40   31B A_GAGA_CAA-AGCAGAGAAA 231M C 37/37 A 44/40 Dm0652 31F GGGTCTACAA-TTGTCTGCAT 261Y T 56/- C 46/-   31F ATAAATTTCC-ACTTGGCTAA 287R A 45/- G 40/- Dm4048 32A CCCCCCATAC-TTAGATAACT 112W A 40/56 T 42/56   32A GGGAGGGTTG-CGATAGAACC 167S G 40/42 C 51/46 Dm2313 32C TTAGTAAATA-TTTAACTTTA 72K T 39/- G 29/-   32C CTTTAATTTT-AAAATATTAG 88W A 39/- T 40/-   32C TGCCAAACTG-AGGAATAATA 123M A 40/- C 42/-   32C AGGAATAATA-ACATACATA_ 134W A 40/- T 56/-   32C _ACATACATA-A_ATATA_AT 144K G 17/- T 56/-   32C CATACATA_A-ATATA_AT_T 146Y C 40/- T 45/-   32C TA_A_ATATA-A_T_TTT___ 152W A 4/- T 51/-   32C TA_ATATA_A-T_TTT___AA 153InDel T 19/-     32C _ATATA_A_T-TTT___AAAA 155W T 48/- A 51/-   32C TA_A_T_TTT-AAAATTTTTT 159InDel TTT 39/- AAA 51/- Dm3374 32F GAATTGATAT-GCAGTTATGT 46K G 25/40 T -/51   32F ATATATCCCA--CGGATAAAA_ 71RW GT 34/42 AA 29/42   32F _CGGATAAAA-GAAATGCAAA 82Y C 51/51 T 47/42   32F TCGCAGCATT-ACACAG_GAA 115R A 56/51 G 37/40   32F ATT_ACACAG-GAA_GTACGA 122Y T 56/43 C 31/37   32F ACACAG_GAA-GTACGAATTG 126W A 56/40 T 33/42 Dm2112 33A TAACGTAAAA-TTATGTAAAG 105K G 32/- T 35/-   33A ACTGTAACAT-AATCGAAGAA 142W T 45/- A 42/-   33A AATGGAGAAA-GCGGAAATGC 164R G 51/- A 56/- Dm3569 33A TTTTGAAGTC-AAACATTTCT 49K G 29/45 T 9/42   33A AATCAAAAGT-TCAAATAAGC 103K T 42/56 G 33/43   33A ACTCAGACTC-AAACAATCTC 169S G 43/35 C 42/42   33A GCAAGATAAG-AGCTGACCAG 227M A 46/- C 35/- Dm0355 33D ATTGCGGCTC-AATGGCTTGG 209R G 29/42 A 33/42   33D AATGGCTTGG-AAATCGCTAG 220W T 35/40 A 37/40   33D GTGACCAGAG-GGGAATCAAA 304Y T 42/- C 30/- Dm3982 34B TACTTACCGG--CTCATCCGTA 102InDel TA 32/-     34B CGGCTCATCC-TACACCTAAT 118K T 33/10 G 30/35   34B CGGAACTGCC-GCTCTTTCCC 206K G 35/14 T 39/56 Dm0393 34C TGGGAACTGC--GTGAGATGGG 194WM AA 42/- TC 33/- Dm0055 34D CCTGGACGGC-AT_AAGGCCA 895S G 40/45 C -/37   34D GGACGGC_AT-AAGGCCAGTG 898Y C 56/40 T -/46   34D CCGACAAGGA-A_TGATGATG 931R A 56/51 G -/56   34D GACAAGGA_A-TGATGATGAC 933R A 56/34 G -/39 Dm2079 34E TTTTCGAGAT-CGACAAAATG 165W A 35/- T 33/- Dm0863 34F CTTGGTCGGG-GGTTATGCAA 169Y C 45/4 T 24/7 Dm0012 35A TGGGAAATTT-TAAAGCCCGG 48K G 23/- T 42/- Dm0188 35A CTGATGGAAT-GTATGTCTGG 168Y T 51/- C 29/- Dm3783 35A CTCTAAATTT-AGCCACCCCC 76Y C -/27 T -/29   35A AGCCGCTCCG-CAGTCAACTG 257Y C 35/- T 34/- Dm0388 35B ACCGTGCTGC-CTGCAGGGGT 225R A 40/- G 26/- Dm0035 35C TATTGTGATG_CTAGGAAATT 928S C 51/- G 29/- Dm0041 35C TAATCGGCTG-TTAAGCGTAC 114Y T 30/35 C 27/51   35C AGCTTTTTTT-AACATTCCAA 234W A 56/- T 44/- Dm0400 35D AAGCTTTCCC-TTTAAAGGAG 210S G 56/56 C 56/47   35D TTGTGTGTTT-CACTCAGAAA 259R G 56/40 A 56/38   35D AATGTGGTCA-CCCCCTCTAA 295R G 51/29 A 45/40 Dm2034 35D ATTGGAGAAG-GACTCCCGGT 926R A 45/11 G 37/10 Dm0020 35E ATGCTCTGCC-CTAGATGTAT 25Y T -/42 C -/56   35E GTATAGAATG-GAA_TTCTTC 87R G 40/46 A 42/40   35E AGAATG_GAA-TTCTTCAGTA 91Y C 45/42 T 33/56 Dm2018 35E ATATATTACC-TTTTTCGTTT 196R A 45/- G 38/- Dm4135 36B GCCCAAGTAA-TCCCAAGGAC 146R G 40/35 A 37/42 Dm2390 36C GCGATGAAAC-TCCGACGTAC 53R A -/37 G -/35   36C CCGACGTACG-AAGGAATTGC 65R A -/47 G -/42   36C CGTAAGAGCT-ATCTTGTTTT 120W T 48/31 A 42/39   36C ATCTTGTTTT-GTATTTATTT 131Y T 56/44 C 56/35   36C GTATTTATTT-TTTGGCACTA 142W T 47/56 A 42/35 Dm2451 36C AACCATCCTT-AGACATAAAT 118R A 45/15 G 40/44   36C TAAATAGAAT-AA_A_AGT_A 134Y C 45/14 T 40/51   36C ATAGAAT_AA-A_AGT_AAT_ 137W T 45/(14) A 40/40   36C AGAAT_AA_A-AGT_AAT_TT 139W A 51/21 T 40/35   36C T_AA_A_AGT-AAT_TT__CC 143Y C 56/8 T 37/40   36C _A_AGT_AAT-TT__CCCAAA 147R A 45/(8) G 56/40   36C AGT_AAT_TT-----CCCAAATCAA 150InDel ATATT 45/8     36C CCAAATCAAA-GTG_AA_GTA 163Y T 56/(4) C 42/20   36C ATCAAA_GTG-AA_GTACTAACGA 167InDel   A 42/15   36C ATCAAA_GTG_AA-GTACTAACGA 171InDel   T 42/15 Dm2987 36F CCATCAGCAC-TTTAACCAAA 64W T 32/56 A 35/56   36F CTCCGGCCGA-CGAGAAGAGC 112Y T 56/40 C 35/47 Dm2608 38A AATTATGTTC-GCCTACAGCG 206Y T 51/- C 40/56 Dm0877 38B CTCTGACACT-TAGCAAACGA 43Y C 19/25 T 17/25   38B GGAAGCCGTG-AGGGAAAGTC 120W A 46/(18) T 46/10   38B AGAACAGAAC------GAACAGAAAG 172InDel   AGAAGA 24/- Dm0299 38E GCCGGAAAAT-CCCTCCACCC 245Y C 56/- T 32/- Dm0353 39B TTCGGCTGCT-CAGCTTCTTT 55R A -/42 G -/51   39B TTCTTTTCCG-GTATCCAGGG 70M C 32/40 A 33/51   39B GGCTGCTCGA-ACAGCTGGCG 89Y T 40/45 C 34/47   39B AATCCCTGTG-TTTTCACGGC 114R A 51/45 G 35/40 Dm0976 41C TCAAAGGGTT-GCAAAACCCG 138Y C 40/32 T 30/45   41C TTGTGACACT--GTCATAGTA 250InDel TT 45/32   Dm2609 42A AAATCAAACA-TTTTTTTAAA 101InDel T 40/47   Dm3495 42A AGGCACGGGG-CTTGTTTTCG 145K T 56/37 G 31/56   42A TTAGCCGAGA-GTCAGAGGAG 194Y C 35/46 T 42/45 Dm2106 42B ATATGACCGA-GCTACGGTTC 157R G 45/42 A 56/46 Dm0749 43D GCAGCCCATT-TCGACGGGGC 91Y T 51/48 C 56/44 Dm0735 43E GCTGTCCAAG-TGCGCTTCGC 101Y T 40/35 C 51/40   43E TTCGCATCTA-GACATGGACA 124Y T 46/42 C 37/42 Dm0746 44A CATATGTATC------GTTCTGTTTA 163InDel T**** 56/40 GCACGG 51/38 Dm2209 44C TAGTACAATA-AAGTATCACA 130R G 51/- A 45/42   44C TTTCTTATCA-AACATATAAA 157R G 40/(13) A 46/42 Dm0722 44D GAGCACACCG-TCTTACTTAT 239K T 51/40 G 56/27   44D GCACACCGTT-TTACTTATCA 241Y C 45/29 T 51/20 Dm0740 44D TCATAAATAA-AACGCAAT__ 540R G 32/23 A 27/27   44D A_AACGCAAT----TCAATGCCAT 548InDel   GCGT 35/16   44D TTAATAAATA-AAAACACAGC 571W T 51/31 A 51/48 Dm3845 46A TGGAGTTTTT-AATACTAGAA 142M C 51/46 A 33/39 Dm0750 46B TCATTCGTTT-GAATTCAAAC 109K T 48/45 G 56/56 Dm2314 46B TAATCCTATT-TCGCCTTCCC 185Y C 23/- T 37/-   46B AAGAAATTTT-CCAAGTCCTG 226Y T 33/- C 42/- Dm0778 46F GTTTGTAGAT-ATAACTTTCA 62W A 7/40 T 6/51   46F AAATATTTCC-ATTTTATACA 127R G 42/21 A 10/56   46F ATGTTTCGTA-TCCTTTCATC 188M C 37/31 A 42/40 Dm2239 47C AAAATGCTGA-ACTTTGAACT 96K G 44/17 T 42/33   47C CTCAGCTAAA-TTAATACACT 302InDel   A -/48   47C CTAACTCGTT-CT________ 392Y T 44/9 C 44/11   47C ACTCGTT_CT-----------ATTCAAGGG 395InDel TAGTTCCTAGT 42/11     47C AAGGGCATTT-ATTTCGAGTA 420M A 44/42 C 44/32 Dm0711 47E GAGCATCGTC-TCGGTGGGAT 108R G 56/40 A 40/42   47E CATTGATTCC-GGATAGGGCA 168S C 56/31 G 56/56   47E TATCTGTCCG-ATAGCGCTCT 254S G 51/- C 51/- Dm0084 48C TCAGCTTATT-GAGAGTAAGT 84M A 30/56 C 30/51   48C ATAATTAAGT-ATTTCTGCAA 122R G 44/51 A 17/51 Dm2682 48C ATATATATAT--GTATATGTAT 216InDel AT 56/-   Dm0761 48F ATATGTATAG--TA_CATTTGGC 184InDel   AG 33/-   48F GTATAG__TA-CATTTGGCAT 188R A 43/- G 32/- Dm0273 49D AACGTATGCG-ATGAAGTATG 57Y C 23/40 T 12/40   49D TTTCAAAAAA-TGACAGTTTC 97InDel   A 22/42 Dm2480 50A AGACCCCTAA-GACGTTGATA 112InDel   A 51/- Dm2233 50C CATTGTCCTT-CGCGCGACTA 161K G 42/- T 35/- Dm0064 50D TTTGTTTTAC-TTTCTTTTTA 95W T 37/- A 31/-   50D ATGTAGCTAA-TTACTACATA 111R A 29/- G 33/-   50D CTACATATTA-TACATTTTGT 130W A 40/- T 40/- Dm0766 50F TATTGCACTT-GGATCATCTA 93Y T 56/- C 51/-   50F TGGTACACTG-GCATGAAGCA 153W A 45/- T 40/-   50F GCATATGGCA-ACAGGTTGAG 176R A 51/- G 40/- Dm0307 51B AATATTAATT-TACAAAAT_A 201M A 25/56 C 33/34   51B T_TACAAAAT-AATTGTTTAA 210K T 44/40 G 37/29   51B GAATGAATCC-ATTAATATAA 239Y C 42/33 T 44/-   51B ATTAAAACTC-GATAATAAAT 269Y T 35/- C 33/- Dm2633 51E ATGCCAAGGG-TCTTAATATA 12W A -/42 T -/42 Dm2663 51E TTTTGTCATT-TTTTTCCCGA 120R G 22/- A 42/- Dm2633 51E TAACTTTGGT-AACTTTATGA 177Y C 56/21 T 40/31 Dm3242 51E ATTTAGTATC-CATATTTCGC 59S C 13/56 G 7/51   51E AGTCGGTTTT-GCCAAACACA 137R A 45/39 G 33/35 Dm3702 51E GTTAAAATTA-TATTTGTTAA 95R G 40/- A 37/-   51E GTATGTAATA-----TAAGATAAGA 121InDel   TAAAC 38/-   51E AATGAATTCT-CACT__AAATC 168Y C 42/- T 44/-   51E ATTCT_CACT--AAATCCTCCC 173WR AA 37/- TG 37/- Dm3709 51E GAATCAGAAT--------GAATCAGAAT 66InDel   CAGAATAA 51/- Dm0754 52B CTGCAAATCA-ATATAATTAT 116Y T 51/44 C 33/21 Dm2192 54A AAATTAAATG-TGGTTCTGAA 147K G 56/- T 56/-   54A ACAGCATTTC-GGAATTGCTC 178S C 42/- G 51/- Dm2427 54C CCAAATCGCG-CGGC_TATTG 64Y T (33)/29 C (22)/35   54C TCGCG_CGGC-TATTGAATTT 69Y C -/40 T -/30   54C GTATGTCGCT-CCTACAGTAT 211W A 53/- T 42/- Dm0068 54F ACAACAAAAA--ACAACA_CAA 201InDel AG -/56 C* -/46   54F AA__ACAACA-CAACAGTGCC 209R G -/42 A -/46   54F GCTCTCGCTC-CGCACAG_GC 374S G 37/4 C 35/40   54F TC_CGCACAG-GCTCG_TACA 382R G 37/- A 33/19   54F ACAG_GCTCG-TACATAGCAC 388M A 37/- C 24/4 Dm3490 54F GCGAAAAAAA-ACACTGTAGC 44InDel   T 24/44 Dm1720 55A GTGGCACTGG-GAAAAGTTCA 149R A 48/35 G 56/27   55A AATGCCGCTTA-GATAGTATT_ 234R A 51/- G 42/-   55A _GATAGTATT-TATTGAAGTG 244InDel   ACTT 40/- Dm2631 55A TGTTGTGCCA-CATCGACATT 179Y C 37/- T 40/- Dm0302 55B AAGGAGTACT---CAATGAATTC 841InDel ACT 39/24     55B CAATGAATTC-CTGCACACCA 854M A 44/29 C 46/27 Dm0810 55B ATAACTATTT-ATTTCTGTTT 72M C 35/- A 37/-   55B TTTTTTTTTT---GGGGGTGGGA 135InDel   TTT 23/- Dm0851 55B ATTACGAGTT-CGAGTTTCCC 115R A 37/33 G 42/43   55B AGGGAGCCAT-GATTCGGTTG 163Y C 42/- T 56/- Dm1685 55F CCTGGTGCCA-CGATGATGAT 84Y C 38/- T 29/-   55F TGATGATGAT---GTTAGAAAAC 105InDel   GAT 44/-   55F TTTTGTTTGC-CGGGCGGAAA 135Y C 40/- T 39/-   55F CTGAAGGAAT------CCCCCTCGAT 228InDel   CCCAGC 32/-   55F AACTCGAAAC-GACTCCTGCG