LOCUS AF010325 3291 bp DNA INV 08-JUL-1997 DEFINITION Drosophila melanogaster CHIP (Chip) gene, complete cds. ACCESSION AF010325 NID g2245686 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3291) AUTHORS Morcillo,P., Rosen,C., Baylies,M.K. and Dorsett,D. TITLE CHIP, a widely-expressed chromosomal protein required for remote enhancer activity and segmentation in Drosophila JOURNAL Unpublished REFERENCE 2 (bases 1 to 3291) AUTHORS Morcillo,P., Rosen,C., Baylies,M.K. and Dorsett,D. TITLE Direct Submission JOURNAL Submitted (19-JUN-1997) Molecular Biology Program, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, New York, NY 10021, USA FEATURES Location/Qualifiers source 1..3291 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /map="2-106.8 cM; 60B1-2" /clone="P1 Phage DS00543" /chromosome="2" mRNA join(604..677,928..2964) /gene="Chip" /product="CHIP" gene 604..2964 /gene="Chip" /allele="wild type" intron 678..927 /gene="Chip" /note="P-lacW insertion occurs at position 904 in the l(2)k04405 allele" exon 928..2964 /gene="Chip" CDS 963..2696 /gene="Chip" /note="GenBank Accession Numbers AF010326, AF010327 and AF010328 encode short forms of the CHIP protein" /codon_start=1 /product="CHIP" /db_xref="PID:g2245687" /translation="MNRRGLNAGNTMTSQANIDDGSWKAVSEGGSMLPASNSAVLNPD GSNQSGFAQGGLPYNSAGNPYPPAGQSSPAGNQSIVFQNSNQPGSNTPQYTSSPAPSG SSTPGPVGAQNIPGNYPQSATAGNFNGPVGGPFGSPSSGLGQFSRPASSGTPFNSGQA GHFSSPTVFSVGGQFNPMPPASPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEH RVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRF FRSIYEGGVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVCADARLILE FMYDDYMRIKSWHMTIKGHRELIPRSVIGTSLPPDPMLLDQITKNITRAGITNSTLNY LRLCVILEPMQELMSRHKAYALSPRDCLKTTLFQKWQRMVAPPGKKDPQRPPNKRRKR KGSNSGGGNNSNTPPVTNQKRSPSGPSFSLSSQDVMVVGEPTLMGGEFGEEDERLITR LENTQYDGTNAVEHDNHTGFGHADSPISGSNPWSIDRAGAIPASPGNGAAPQNNANIS DIDKKSPIVSQ" polyA_site 2964 /gene="Chip" BASE COUNT 898 a 870 c 773 g 749 t 1 others ORIGIN 1 aaaatatgtt taccattcaa cgacactnga agatgtgcga aattaatgca gtttataaat 61 aacataccta aacacgtact ctagtatata aaaatcgaac actttcgcat cacaccacgg 121 gcttgcagtg tcacaggcca aaattacata aatataaaat aaactaccga cgttaaagca 181 acagtcttac aaccatattt tgattacaaa tttttacggc acggcacata ctaaattatt 241 aagtcaaggg tgcggcgtgg gacaaagtga aacggaatgg aaatggaatc tgcttgagtc 301 ggtcgatagg tttttcttta caattaatca attatttaga gggtatatgt ggcaattgat 361 gtacaatacg ttaagggtgg tatgagattt cgaagaaact aaaaacaaac tatgagaaac 421 agtcttgaat cgttagtttt atttaacgtc atacaaaaaa tttgttcaag aacatgaaaa 481 ccctccaggc gataggtcgt ttttccgttc attccaaacg cgagacaaac ccacgcttgc 541 gttctcacct atcgaaatct gctatttgga aagcgatggc aaaactatcg gtggaggcca 601 atcagttttc ttaaattgta gatacattta tatgtgtttg tgctttaaga attaaaatat 661 tgtatgcctt ttgcaaggtg cgtatacggg agcagtctgc ctgcactgaa atccggccga 721 tccggccctt cgcagcgttt tccatttcga acgcgaacgg gccgtgaaaa gtgtgtgtgt 781 gtacacacat attttgtaaa tgcagtgcga catacagaca agtgcataca catacgcatg 841 ggcaccataa aaatataccg aacccgaaac ccccaaaacg ccgaaataat aatgggttca 901 aactaatgga ttcctctcca ttcacaggcc gacgcgaatg cccgatagaa ccgaccacag 961 gcatgaatcg taggggtttg aacgctggca atacgatgac ttctcaagcg aacattgacg 1021 acggcagctg gaaggcggtc tccgagggcg gatcaatgct gcccgcgtcc aattcggcgg 1081 tcctcaatcc ggacgggagc aaccagagcg gcttcgcgca gggcggcctg ccgtacaact 1141 cggccgggaa tccgtacccg cccgccggcc aatcctcgcc agccggcaac cagtccatcg 1201 tgttccagaa ctccaaccag cctggctcga acacacctca gtatacctcc tcacctgctc 1261 cctcgggctc atcgacaccc ggacctgttg gtgcgcagaa cattcccggc aactacccgc 1321 agtcggcgac ggcgggcaat ttcaatggtc cagttggcgg gcccttcggc tcgccatcct 1381 cgggactcgg ccagttcagc cggccggcca gctcgggcac tccgtttaac agtggccagg 1441 ccgggcactt ctcatcgccc acggtattca gcgttggcgg gcaattcaat ccgatgccgc 1501 cggcgtctcc attcggccac ggaggcaacc acccgatgat gggcgggccg cagcagatgg 1561 aacgcatcga ccagggcttc aggcggcaca attcctactt tagccacacg gaacaccgcg 1621 tctttgagct aaacaagcgg ctgcagcagc gcaacgagga gagcgacaac tgctggtggg 1681 actcgtttac cacggagttc ttcgaggatg atgcccggct gaccattctg ttctgcctgg 1741 aggacggacc gaagcggtac accatcgggc gcacgctcat cccgcgcttc ttccgcagca 1801 tatacgaggg cggcgtttcg gacctgtact ttcagctgaa gcatgccaag gagtcgttcc 1861 acaacacgtc catcacgttg gactgcgacc agtgcacggt gatcacgcag cacggcaagc 1921 ccttcttcac gaaggtctgc gccgacgcaa gactgatctt ggagttcatg tacgacgact 1981 acatgcgcat caagtcatgg cacatgacca tcaagggaca ccgcgagctc attccaaggt 2041 ccgtgatcgg caccagtctg ccgcctgacc cgatgctgct agatcaaata accaagaaca 2101 tcacgcgcgc tggcatcacc aactccaccc tcaactatct gcgcctctgc gtcatcctcg 2161 aaccgatgca ggagctgatg tcgcggcaca aggcgtacgc actgagtccg cgcgactgcc 2221 tgaagacaac gttgttccag aagtggcagc gcatggtggc tccgcccggc aagaaggatc 2281 cgcaacgacc acccaacaag aggcgcaaac ggaagggctc caactcgggt ggtggcaaca 2341 actcgaacac tccgcctgtg acgaaccaga agcgttcccc ctccggtccc agtttctccc 2401 tctcctccca ggacgtgatg gtggtgggcg agccgacgct gatgggcggc gagtttggtg 2461 aggaggacga gcggctgatc acccggctag agaacacgca atacgacgga accaatgccg 2521 tggagcacga taatcacacc ggctttggac acgccgactc gcccatatcc ggctcgaatc 2581 cgtggagcat cgaccgggcg ggagccatcc cggccagccc tgggaacgga gctgccccgc 2641 agaacaacgc gaatatatct gacatagata aaaagagccc cattgtatcg caatagaact 2701 taataaaaca taatatttcg ctatattgtc aaatgtattt tcatacttgc atgtaaaaat 2761 atttaaataa agctttcaag ttttaggaaa tgtatataag acatacatac atattaaatc 2821 tatataattg taccttaagt cgtctactct acacactatc tattataatt aattaaaccg 2881 taggatactt ctgttcttgt cttgactgcc ttgcaaagta cttaatgtgt tgttttagta 2941 aaacataact tttaagcaca acgcaaaaac attgaaagct ctttatttac cttcttatcg 3001 catggaacag caggtgctga cttactttct gggctgccca ttgcaaattg ggtacaaaaa 3061 tgctttgaac atatctcaga tgcttacaac tgaatagaat accaagatag ccaatttgaa 3121 ggaatgctat catatacgaa agattgccat gtatatagag tacgtggcat ctcatcagat 3181 attcggattg taatcacagt gcttagcaat cattaccctt tccgtgattt tgcgaagtcc 3241 agctcctttg cgcatgcacg aatatctgcg ggatacagat acacagtttc g // LOCUS AF019020 345 bp DNA INV 02-NOV-1997 DEFINITION Drosophila melanogaster B09 diptericin (Dipt) gene, complete cds. ACCESSION AF019020 NID g2582316 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 345) AUTHORS Clark,A.G. and Wang,L. TITLE Molecular population genetics of Drosophila immune system genes JOURNAL Genetics 147 (2), 713-724 (1997) MEDLINE 97476321 REFERENCE 2 (bases 1 to 345) AUTHORS Clark,A.G. and Wang,L. TITLE Direct Submission JOURNAL Submitted (12-AUG-1997) Biology, Pennsylvania State University, 208 Mueller Lab, University Park, PA 16802, USA FEATURES Location/Qualifiers source 1..345 /organism="Drosophila melanogaster" /strain="B09" /db_xref="taxon:7227" gene 1..345 /gene="Dipt" CDS 24..344 /gene="Dipt" /note="antibacterial protein" /codon_start=1 /product="diptericin" /db_xref="PID:g2582317" /translation="MQFTIAVALLCCAIASTLAYPMPDDMTMKPTPPPQYPLNLQGGG GGQSGDGFGFAVQGHQKVWTSDNGRHEIGLNGGYGQHLGGPYGNSEPSWKVGSTYTYR FPNF" BASE COUNT 87 a 92 c 92 g 74 t ORIGIN 1 ttcttcaatt gagaacaact gagatgcagt tcaccattgc cgtcgcctta ctttgctgcg 61 caatcgcttc tactttggct tatccgatgc ccgacgacat gaccatgaag cccactccac 121 caccgcagta cccactcaat cttcagggag gcggcggtgg ccagagcggc gatggttttg 181 gctttgcagt ccagggtcac cagaaggtgt ggaccagcga caatggacgc cacgagattg 241 gactgaatgg aggatatgga cagcacttgg gaggaccata tggcaactca gaaccgagct 301 ggaaagtggg aagcacctac acctacagat ttccgaattt ctaag // LOCUS AF030443 1345 bp DNA INV 21-MAR-1998 DEFINITION Drosophila melanogaster ubiquitin-conjugating enzyme 9 (UBC9) gene, complete cds. ACCESSION AF030443 NID g2979683 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1345) AUTHORS Joanisse,D.R., Inaguma,Y. and Tanguay,R.M. TITLE Cloning and developmental expression of a nuclear ubiquitin-conjugating enzyme (DmUbc9) that interacts with small heat shock proteins in Drosophila melanogaster JOURNAL Biochem. Biophys. Res. Commun. 244 (1), 102-109 (1998) MEDLINE 98183406 REFERENCE 2 (bases 1 to 1345) AUTHORS Joanisse,D.R., Inaguma,Y. and Tanguay,R.M. TITLE Direct Submission JOURNAL Submitted (20-OCT-1997) Recherche en Sciences de la Vie et de la Sante, Universite Laval, Pav. C-E. Marchand, Sainte-Foy, Quebec G1K 7P4, Canada REFERENCE 3 (bases 1 to 1345) AUTHORS Joanisse,D.R., Inaguma,Y. and Tanguay,R.M. TITLE Direct Submission JOURNAL Submitted (20-MAR-1998) Recherche en Sciences de la Vie et de la Sante, Universite Laval, Pav. C-E. Marchand, Sainte-Foy, Quebec G1K 7P4, Canada REMARK Sequence update by submitter FEATURES Location/Qualifiers source 1..1345 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /map="21D" /chromosome="2L" gene 613..1092 /gene="UBC9" CDS 613..1092 /gene="UBC9" /codon_start=1 /product="ubiquitin-conjugating enzyme 9" /db_xref="PID:g2979684" /translation="MSGIAITRLGEERKAWRKDHPFGFVARPAKNPDGTLNLMIWECA IPGKKSTPWEGGLYKLRMIFKDDYPTSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD WRPAITIKQILLGIQDLLNEPNIKDPAQAEAYTIYCQNRLEYEKRVRAQARAMAATE" polyA_signal 1284..1289 polyA_site 1297 BASE COUNT 385 a 358 c 308 g 294 t ORIGIN 1 tacattgcat ttcttaaaac taatgcagta atttgtgtaa acagtaatgc gaataaattt 61 taattctaac gtttaattaa actagttttg tattgagtag agggttttta ggaatgtaac 121 ggcttaagag aaaaacctaa tacattttaa gttgagctta ccaaaatcca aagaattttt 181 aaatttaaaa cataatacaa aagtgctttg aaaaagtcag tattttaata ccactgttta 241 tccacggcca cactaaatat cgataaccgc atagtgagac cctttgtgta gaaaaactta 301 tacctttagc gagcacaagc gttcattcct gaaaaattgc ggtaaaaatt gcgaaaagcg 361 cgagttcccc ccgcgattgc aaataattaa tttgcttgga accactggag acgcaaggac 421 gaacagagag gtaggtgctc ttgcacttag cgcgccaaaa ggcgacaaag cccctcgtag 481 gccacttacc cacacacaca cattcgcaga cagacgcgcg tgcaaaaaag gccaagtggg 541 actgctagcg gaaatccagg actcgaggac acgttcgggc ggcagtagag aagcgagcaa 601 gcagcgacga ccatgtccgg cattgctatt acacgattgg gggaggagcg caaggcctgg 661 cgcaaggatc acccattcgg gttcgtcgca cgacccgcca agaaccctga cggcaccctc 721 aacctgatga tctgggagtg cgccattccc ggcaagaagt ccaccccctg ggagggcggg 781 ctctacaagc tgcgcatgat cttcaaggac gactacccca cctcgccgcc caagtgcaag 841 ttcgaaccgc cgctgttcca cccgaacgtc tatccctcgg gcaccgtttg cctgtcgctg 901 ctggacgagg agaaggactg gcgccccgcc atcaccatca agcaaatcct gctgggcatc 961 caggacctgc tcaacgagcc gaacatcaag gacccggccc aggcggaggc ctacaccatc 1021 tactgccaga accgactgga gtacgagaag cgcgtgcgtg cccaggcccg cgccatggcg 1081 gccaccgagt agtcgggctc ctgccaacca cctttaccac atagacatta aatacacaca 1141 tctagccggt aagcgtttgt ttggaatgct ctccacgtct acttactttt aaagaatcga 1201 ctaattttgg atagccccca cggcccgaag catctaattt tttaatgttc tgcacttgct 1261 taattaccag catgtaccat ctgaataaat acaaataagt cctgtaattt ttcgatgagg 1321 cccaaagtgg ccacgtggca cccag // LOCUS AF030959 2485 bp DNA INV 25-NOV-1997 DEFINITION Drosophila melanogaster metchnikowin precursor (Mtk) gene, complete cds. ACCESSION AF030959 NID g2623231 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2485) AUTHORS Levashina,E.A., Ohresser,S., Lemaitre,B. and Imler,J.-L. TITLE Two distinct pathways can control expression of the gene encoding the Drosophila antimicrobial peptide metchnikowin JOURNAL Unpublished REFERENCE 2 (bases 1 to 2485) AUTHORS Levashina,E.A., Ohresser,S., Lemaitre,B., Imler,J.-L., Reichhart,J.-M. and Hoffmann,J.A. TITLE Direct Submission JOURNAL Submitted (21-OCT-1997) UPR 9022, CNRS, Immunite des Insectes, Institut de Biologie Moleculaire et Cellulaire (IBMC), 15, Rene Descartes, Strasbourg 67084, France FEATURES Location/Qualifiers source 1..2485 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /chromosome="2" /map="52A1-2" gene 1..2485 /gene="Mtk" TATA_signal 1466..1473 /gene="Mtk" mRNA 1497..1763 /gene="Mtk" /product="metchnikowin precursor" sig_peptide 1526..1603 /gene="Mtk" CDS 1526..1684 /gene="Mtk" /function="antimicrobial peptide" /note="active against Gram positive bacteria and fungi" /codon_start=1 /product="metchnikowin precursor" /db_xref="PID:g2623232" /translation="MQLNLGAIFLALLGVMATATSVLAEPHRHQGPIFDTRPSPFNPN QPRPGPIY" mat_peptide 1604..1681 /gene="Mtk" /product="metchnikowin" polyA_signal 1729..1734 /gene="Mtk" polyA_signal 1734..1738 /gene="Mtk" polyA_signal 1742..1748 /gene="Mtk" BASE COUNT 704 a 539 c 533 g 709 t ORIGIN 1 tcgacttttc tgccattagc catcggctgt gattgattga ctaataccgc aatttgcctg 61 tctcccaccg atgtttacat tcacaatcta ttcctctgtt tacgcgcaag ccaaacattt 121 attttttaat gcgctaacca tggaaattga ttaattttat ttggaattcc gtttgattta 181 tttgatttat agctgccgaa gagaacataa aaggaatttt cgtaaactga tattgaaggc 241 tgaggtcaat tcaaatcgat ttgataaaca ataacatttt tatgttttat gtacacctat 301 tgtttgtctt gctggggttt tgcgtacttt gctgaagcgg aaactgcgtc aatcaatgca 361 gcttaccccg tttttcctaa actaccagcg taagtgaagc gttttcaacg cctaatgagc 421 cgtgactata accgcttttt ttcctcctaa aaagtaagca cacaaacaat aaaacgcaag 481 tgcaaaatta ctcaaaatgt caaaatgtcg agtcatttaa agggcagcgc cacgttcaac 541 ctcttttgca tgcccctttc tgctgcgaga aaactaacaa agtgctctaa tcgagccaag 601 gggcaatttc ttgtgttgct gcagctgcac tttgcacctc cgcatccgtg cacccaaaaa 661 cccgctttct agatgttctc atcatgcact gaaaaagaat ccaaattttt acaagaaata 721 gtttaaaatt aggtaatgtg aaagatatcg gcacacggac aggccgaatt atctgttgta 781 aaactagctg ctcagttatt aaaaacattt gtagttgctg acgtttccat acagagacta 841 attttatttt cacggacagg ggttttccgc tttaattgct tcatttttgt tgctttattg 901 cgtgtatatt gccccacaaa acagatataa atcattcgcg catatcgtaa atgttggtag 961 aaaatgacaa acaagagaaa aaagatgatt aaaagcttca agacaatcct ctataggatc 1021 tgattaaata tgaatatttt atttattagt tttctttctg tgtacggctt agaaggcaga 1081 agctgcgagg ggcgtagggc agtgggcgtg gctccgtgtt gacgcatgtt gactatgcct 1141 ttgaatggct gccgtggttg tcggtgggta atttgcaatg cagaaaaacc aacagggcgc 1201 taaaaaggag agtgttttcg tgggaggtgg agatggtcac tgggggcaac ataaatattc 1261 agcgagaaac gtcatattta catttagtct aggctgataa tccgggaccg tgggaagtcc 1321 cctttgggtg gtgctggctg ggttcccctg gccacaatcg gttatctgcc cccggctgac 1381 acttgcccgt cattcattcg gctgcttatc gcagaagctc aaataaaaag tccccaatct 1441 gcgactcgtt tgtctggaac tgagctataa aagcctcgcc atctcaacgc tctaagcatc 1501 aatcaattcc cgccaccgag ctaagatgca acttaatctt ggagcgattt ttctggccct 1561 gctgggtgtg atggccacgg ctacatcggt gcttgcagag ccacatcgtc accagggacc 1621 cattttcgat acgaggccgt cgcccttcaa tcctaaccaa ccaagaccgg gtccaattta 1681 ttaaattgac agtgggaaat tcacactgct gatgtcgtta acacattgat aaaattaata 1741 caattaaacc aaaactgaac atcaaagctt gtcattgggt aattaaatta attccacgct 1801 gaagggggcc aaaagacaca ggtaactgga gggcgggcaa ttagcaatca cagtttcact 1861 gaaccagaat tatgaggtag ctgcaattga aattgtacct cgctgattgt tcggtgttta 1921 aggcttcttc aatggtattc aatccataaa tcataatggc aactgtgatt gagccaacat 1981 ttggaatgca aaagcactcg aatgcaattt aatttgcatt ttgcatctgc ttggctcgcg 2041 gggcgtatga gtaatcacgg ttgccatcga ttgccattct ctgtagtata ctacacttgt 2101 gcatgtatat ttagatgcga ataaaaattg agtacgcgca aacatttcaa tgagcttcac 2161 acacaaaaac gacaatttct tcctcaccac tctccgctgt ttctgtctat tttcagctgc 2221 tatccaagaa aagcgctaag aaaaacactt gcaaaaatta gcagcagcag ctgatggacg 2281 aatggcggtt ggcggcgttc ggtgcgggag gccgtttcgt ctataaatag tctttgaaca 2341 ctttctgcgc gtgacagctg tgacagcggc catgacgtca ttggctggat gagccacgtc 2401 acggatgcgg tataaactgg tctggctaag gccaatgaaa gcatatcgcg catacgcccc 2461 gttgacccac ggcaaacaaa aacgc // LOCUS AF035546 2795 bp DNA INV 28-MAY-1998 DEFINITION Drosophila melanogaster p38a MAP kinase gene, complete cds. ACCESSION AF035546 NID g3158379 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2795) AUTHORS Han,Z.S., Enslen,H., Hu,X., Meng,X., Wu,I.H., Barrett,T., Davis,R.J. and Ip,Y.T. TITLE A conserved p38 mitogen-activated protein kinase pathway regulates Drosophila immunity gene expression JOURNAL Mol. Cell. Biol. 18 (6), 3527-3539 (1998) MEDLINE 98252940 REFERENCE 2 (bases 1 to 2795) AUTHORS Han,Z., Barrett,T., Davis,R.J. and Ip,Y.T. TITLE Direct Submission JOURNAL Submitted (21-NOV-1997) Program in Molecular Medicine, Howard Hughes Medical Institute and University of Massachusetts Medical School, 373 Plantation Street, Worcester, MA 01605, USA FEATURES Location/Qualifiers source 1..2795 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="3R; 95E4-F1" mRNA join(952..1052,1153..2482) /product="p38a MAP kinase" CDS 1196..2296 /note="stress-activated; p38a MAPK" /codon_start=1 /product="p38a MAP kinase" /db_xref="PID:g3158380" /translation="MSVSITKKFYKLDINRTEWEIPDIYQDLQPVGSGAYGQVSKAVV RGTNMHVAIKKLARPFQSAVHAKRTYRELRLLKHMDHENVIGLLDIFHPHPANGSLEN FQQVYLVTHLMDADLNNIIRMQHLSDDHVQFLVYQILRGLKYIHSAGVIHRDLKPSNI AVNEDCELRILDFGLARPTENEMTGYVATRWYRAPEIMLNWMHYDQTVDIWSVGCIMA ELITRRTLFPGTDHIHQLNLIMEMLGTPPAEFLKKISSESARSYIQSLPPMKGRSFKN VFKNANPLAIDLLEKMLELDAEKRITAEEALSHPYLEKYAEPSVEQTSPPYDHSFEDM DLPVDKWKELIYKEVTNFKPPPSYAQVLKDVK" BASE COUNT 804 a 583 c 602 g 806 t ORIGIN 1 ggactatcta atcgcattcg gttcgcagat cttttacttg tgctgaacat gccatcgatg 61 ttaacaatgt tcccgctatc tgagatagtg gactacagaa aatctgcatg tttgccagtc 121 caggttccaa aggtcgcagt tcacagcggt tgaagtggct tcttccagct cccctgcggt 181 ctaacattta ggctttcaag cgaacactcg ttaaaccatg taatgtttat cttttatacc 241 gctaatatat tcagtatcat tcagataaac tcgtcaattt acttatgtac atacgctaaa 301 gttttctagg ttacgatgcg agcgggagcg gcttgcgtgc gaaactaact gttcgtcgga 361 gaatggtagg gcggaatgtc aggctgcgtt tacggaacga ttagattagc ttatttgata 421 accccggcgt tgaaactgcg caggcgcgag tagtgtctct gactattttt cattcaaagt 481 acaccaaaag tgcaacaaaa aatgggtcag gggatggtgc tgctcaaatt tgcaggaaaa 541 acaagagaca gctgattcaa atacttattc gataaattct tattgaactg tcagctgacg 601 gtctggcaac gccgtgtgtt tattttcatt taaacgctct acactccaaa ttttacggta 661 tatgggcttt aaaaatatat tatattacct aatttttaga atattattaa aaactaacaa 721 aattatttaa ttttaatccc tttattcaca tttaaggaca tcgataagag tggaaaaaga 781 gacttgttac aatgcaatga tatggttaat atattatttt atttatttac ttatatatta 841 aggatttttt ttaatatcgt gccaaaaatg attttaacaa ctttactctg atcaaatgta 901 gcgcattcgt gtgtcgcttc tgatcgatct gatccactga cgatctgatt catgaatgcc 961 taacacgcat cggaatggag taatagcgca aatataggaa aaatgccagg gaccagtact 1021 tagttgttga tattcttggg cgtggaacag aggtaagtac tactgacgca gagctgcctc 1081 aagataaacg taatcagcat ggaattatcg ttcgcatggc attttaagaa tcaatacata 1141 tctcgcttat aggcaccatt aactaaggtg acgacgccct tcctcaagca ataccatgtc 1201 agtgtccatt acaaaaaagt tttacaagtt ggatataaat cgaacggaat gggagatccc 1261 ggatatatac caggatctgc agcccgtggg atcgggagct tacggacagg tgtcaaaggc 1321 agttgttcgt ggcaccaata tgcatgtggc cattaaaaag cttgccaggc cttttcaatc 1381 agctgtccat gcaaagagga cgtaccggga gcttcgactt ttaaagcata tggatcatga 1441 gaacgtaatc ggtctgctgg acatattcca tccacatccc gctaatggat cgctggagaa 1501 cttccaacag gtgtacttgg ttacccactt gatggacgca gatctgaaca acatcatacg 1561 gatgcagcac ttgtccgacg accacgtcca gtttttagtc taccagatac tccgtggctt 1621 gaagtatatc cacagcgccg gagtgatcca ccgtgatctt aagccctcaa acattgccgt 1681 caacgaggat tgcgagctgc gcattctaga cttcgggctg gcccgcccaa cggagaacga 1741 gatgacaggc tatgtggcca cgcgttggta ccgggcacct gaaataatgc tcaattggat 1801 gcactacgac caaacagtgg acatctggtc ggtgggctgc atcatggccg aactaattac 1861 cagacgaacc ctcttcccag gcaccgacca tattcaccag ctaaacctga ttatggagat 1921 gttgggcacg ccacccgccg aatttttgaa gaagatctca tcggaaagtg cacgttccta 1981 catccagtca cttccgccta tgaagggacg aagttttaaa aatgttttta agaacgccaa 2041 tccgctggcc attgatttgc tggaaaagat gttggagcta gatgccgaaa agcggatcac 2101 agccgaggag gctctttccc atccatatct ggagaagtat gcggagccca gcgtcgagca 2161 gacctcacca ccatacgatc acagcttcga ggatatggat ttgcccgtag acaaatggaa 2221 ggaattgatc tacaaggagg tcaccaactt taagccccca ccatcgtatg ctcaggttct 2281 aaaggatgta aagtgaacac aaaccatcaa gaatttaaag tattacatag gccaatttat 2341 ttgttatagc ctttatgttc caaccatgtc ttttgtactc aaatttatca attcttagtg 2401 ttaacttttt attttgtttt tttgctgctt actgcttatt taacaaaaaa tttgttttat 2461 aaaaacatca agttattcaa ctaaaaacct tatttttgtc acctcttggg caggatcttt 2521 gggtctatag catatgtgtg tatctccggt catacagatg actgaatcga acaagtttag 2581 tgttctggca gtcgaatgtg cactgataga taaggtgttg agaaaagata agagtttagc 2641 gggtgactaa atgcaagctc agttttcttt ctgtttccta tcgtagaaga catatttttg 2701 cacatttaat ccagaatgcc ggagttcgtg agagtggcaa ttaacgaaag cctttgggag 2761 ttcccggata tatacgagtt cgttcgtttt ctggg // LOCUS AF053725 4616 bp DNA INV 31-MAR-1998 DEFINITION Drosophila melanogaster myristoyl-CoA: protein N-myristoyl transferase (Nmt) gene, complete cds. ACCESSION AF053725 NID g2996201 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4616) AUTHORS Ntwasa,M., Egerton,M. and Gay,N.J. TITLE Sequence and expression of Drosophila myristoyl-CoA: protein N-myristoyl transferase: evidence for proteolytic processing and membrane localisation JOURNAL J. Cell. Sci. 110 (Pt 2), 149-156 (1997) MEDLINE 97196956 REFERENCE 2 (bases 1 to 4616) AUTHORS Ntwasa,M., Egerton,M. and Gay,N.J. TITLE Direct Submission JOURNAL Submitted (13-MAR-1998) Anatomy and Cell Biology, University of Cape Town, Anzio Road, Observatory, Cape Town 7925, South Africa FEATURES Location/Qualifiers source 1..4616 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="3L; 66C" gene <1729..>2892 /gene="Nmt" CDS 1729..2892 /gene="Nmt" /note="dNMT" /codon_start=1 /product="myristoyl-CoA: protein N-myristoyl transferase" /db_xref="PID:g2996202" /translation="MASTRQMAKKFAFWSTQPVTKLDEQVTTNECIEPNKEISEIRAL PYTLPGFKWVTLDLNDANDLKELYTLLNENYVEDDDAMFRFDYQPEFLKWSLQPPGWK RDWHVGVRVEKSGKLVGFISAIPSKLKSYDKVLKVVDINFLCVHKKLRSKRVAPVLIR EISRRVNLTGIFQAAYTAGVVLPTPVATCRYWHRSLNPKKLVDVRFSHLARNMTMQRT MKLYKLPDQPKTKGYRRITAKDMDKAHKLLEDYLKRFQLSPVFSKEEFRHWFTPKEGI IDCFVVADEKGNITDLTSYYCLPSSVMHHPVHKTVRAAYSFYNVSTKTPWLDLMGDAL ISARNVQMDVYNALDLMENKKYFAPLKFGAGDGNLQYYLYNWRCPSMQPERLL" BASE COUNT 1297 a 1064 c 1048 g 1207 t ORIGIN 1 tcgaccctaa ctatcggttc ctgcggtaca acgccttcgt ctggagcaca gccgcaatca 61 tgacgggaag tatttatata gttaatcaga tttgggaaaa cgatcccagt aaatggaact 121 ggttgcctct ggtcggtttt attcggtgct cggtcaaagg taaactttca atgcgattgc 181 ttttaaatcg ttaccatggt tacgtattgc ttttccatat cagattggca cccatccgtc 241 tggatctata taagcggacc gtcgctggcc ctgagcactt tcaatgtcgc catgttcgcc 301 ctgacagcca tttacattag gaaagtgaag gggggtataa ataagttcac aaatgaggag 361 gagggaagga ttaactgcat caactttgac agccagacgt aagatatgat aaaaccttgg 421 accttggtaa actagttatc cttgccgtat tatccacata gttacctaca gttcctgcgg 481 ctctccatcg tgatgggtcc ttacttggat attcaatgtc atttccgtat tctgtcatcg 541 gctccacatt ttctgggaat gggttcggga taatatccga gtattttcac agcgcgtttg 601 gaatcgtttt gatcgatctg ctcgacctga agggcagcac atggactcta atgatggatt 661 cttaagcttg tttctatata attctaataa ttgtttacaa ttaaagcttt aaacaattaa 721 agcccctcat tttattaata tcctttgctg aacgaaggaa ttgaattgaa ttttattgaa 781 ctcaataaat aaatatagtt ttagaaaacg atgtacttta aactgccaag aggtcaccgc 841 gacaagcttt tcacttcgcc accctctggt aacactgatt ctccagccac tttcgattct 901 ttaaaaaaca tcgataggta tcgccaaaaa aatcagctgc tctgcttgta gttttgcgat 961 ttcattgcaa ttttaatttg ctttactgtt caaaaagaaa tacagtgcaa aatatgccga 1021 acgaaaacgc agaggacctc tcgggtcaag agctaaagca gaaggccaag gaggtggccg 1081 acgcatcgga ggcaatgctc gaaaaggttg ttgccggctt aaatatccag gacacggcat 1141 cgacgaatgc agcaggaaac gaggatgcgg agcagcctga tggtgccaag aatgaggctt 1201 cagtgtctgc gaatgcaagt aagttttcaa tatgcctgtg aaaagtcatt tagaggctcc 1261 tcctgcgact gaaaaaatga ggttaggttt tgtcgggaac tacagtccaa cctctctaac 1321 ttgaactgct gtgctattca tttcaattca attttcaatt ttcattttct gtgcaattac 1381 tccaaagatt agccctaacg gaaaaataaa caactcataa atcataaata catatttgat 1441 tttaatgaaa tatgaatata cttacataga tacaattgag ttttttatta cgaataaaat 1501 atgtgtaata taagattcta ccttgttgat tccattgatt gatgcatcat tgaaacccca 1561 aaattgggca aatttgttgt catgggaaac tagcccactg tcgtgatgct ttttttgggg 1621 cagattagtc attccagttt aaactaatca aaaaatgtta taatactatc caacgcatca 1681 tcgtttcttt caggcaaaca ggccttgcta caagccgttt ccgatgctat ggccagtacc 1741 cgtcagatgg ccaagaagtt tgcattttgg tccacacagc cagtcaccaa gctggatgag 1801 caggtgacca ccaacgaatg cattgaaccg aacaaggaaa ttagtgagat tagagcattg 1861 ccatacactc tgccgggctt caaatgggtg acactagacc tgaacgacgc caatgatctc 1921 aaggagctgt acacgctgct caacgagaat tatgtggagg acgatgatgc catgttccgt 1981 ttcgattacc agcccgagtt tctgaagtgg tcgctgcagc cacctggctg gaaacgcgat 2041 tggcatgttg gcgttcgtgt ggagaagtcc ggcaaactgg ttggcttcat ctcagccatt 2101 cccagcaagc taaagtcgta cgacaaggtg ctaaaggttg tggacatcaa cttcctatgc 2161 gtccacaaga agttgcgcag caaacgggtg gctccagtcc tgattcggga gataagccgt 2221 cgcgtcaatc tgacggggat tttccaggcg gcctatacag ctggagttgt gttgcccacg 2281 ccagtggcca cctgtcgcta ttggcatcga tcgctcaatc ccaagaagct ggtagacgtg 2341 cgtttctctc atctcgcacg taacatgacc atgcagcgga caatgaagct gtacaagcta 2401 cccgatcagc ccaagacaaa gggctatcgc cgaatcacag cgaaggacat ggacaaggcc 2461 cacaagctgc tggaggacta cctaaagcgc tttcagctga gcccggtgtt cagcaaggag 2521 gagtttcgtc attggtttac ccccaaagaa ggtattattg attgcttcgt ggttgccgac 2581 gaaaagggca acatcactga tctgactagc tactactgcc tgccatcgtc cgtgatgcac 2641 catccggtgc ataagacggt tcgtgccgca tattcgttct ataatgtgtc tacaaagacc 2701 ccgtggctgg acctgatggg cgatgcactg atctcggccc gcaatgtcca gatggacgtg 2761 tacaatgccc tcgacctcat ggagaacaag aagtactttg caccgctaaa attcggagcc 2821 ggggatggaa acctgcagta ctacctctac aattggcgct gtccatcgat gcagccggag 2881 agattgctct gatactcatg tagtcacctt gtcacctaag ctcacattct cgccctgcct 2941 ttcacagctc ccctcctccg ctttcttcac cctgctggaa gtgccgtgcg gctgctttgc 3001 ttggctccta tttacgtagc tattacctgt aaacttcagt tattccagcg aggaaagccc 3061 tttgcgagca tacacctaaa tagcatcatt gtgaaaattg cattttgcaa cggccaagct 3121 tcgatatttt ttactacaag aacgaacaca aattgtataa aatgcgcagc aatatcaata 3181 aaaatgtaac gtttacttgg acctttattg cctataattg acaataaatt attttgctgc 3241 tcttttaaag atgacaagtt tttatttttt ttaagcagat tattgtattt ttgcccactg 3301 tcccagcata tgatagtctg gccactctgc cacatgccca ttggtctggc aaggtcggtg 3361 aaaaagcgcg cgctaagcaa aacagctgca cttgtgttgg tttattagtt aacgaaatct 3421 gattccaatg ttggtttcct cataatattg acaattaaag acagccgccg acatggacga 3481 ttcggtgttc aagctaaaat accaaaagta caagttgcgc gtcaaggtgt gggagaagga 3541 cttcaagaag aagaatgccc gtgttccatc gaaggtgaga ttgggatgcg gatatgacaa 3601 gtatgctaac tggttgacct gttgcagtat gatataaggg acgccagtca ggagattcgg 3661 gactcataca aaatgatcta caaactgaag acatccttcc tggaagagac gctgaacgat 3721 gttctcagcg aagatggata cgatattctg gagatgtcgc aggccagtga tttgggtgtg 3781 agcatgctgg accaggacgt cagtcttaat gaaggtcctc agctaccgct ggatatatct 3841 gcgctggtgg ggccacagag ctctggtaat ctggaggaaa ttccacaatc ggcggtgggc 3901 tcattttcca atctcatcga cctgcccaat cgtcaagtac ttaccaatct ggtcaatccg 3961 cgatgaaaac catgtcattc gcaaattcga ggcggtggag gagctgccaa tcaaccaaaa 4021 tgcctggggc ctgaatgtga gtaagaagcc accagctcca ccacagcctg tagaggcctc 4081 caaatccgct ccggggcacg gaaagcaacc caaagcgggc gctagtctta agcccagctt 4141 gagtgccaag ttattccaat cctcgcgcgg atttgctaaa cgaaatcccc gaaagccgct 4201 ttcacgttgt gtcagttcct ctagttccac cacatcactt agctcagttc ctactgatca 4261 tcacgaggag ctgctcgact ttgagaccat actcatacgc aaagcccagg agtacaagga 4321 gaagcagcag gccatagcta acaatccaat gctggccagt gagcacagca aggaaagtat 4381 caaaacactg gtggacgacg gctggctcca gcgaaataca aaggaaaaca ctcttgatga 4441 agaagtgccc tttgcggaag caaataataa cagtggtacg tccaagaaaa caaactttgg 4501 cctggccaat cttgatttaa gtaaactaaa gcccactgtt aaggaggaaa aagtgttgca 4561 ggccaagccc gatcaaatgg caatcataca ggagctgcaa acagatatga attccc // LOCUS AF069530 836 bp DNA INV 24-SEP-1998 DEFINITION Drosophila melanogaster 9 kD basic protein (c550) gene, complete cds. ACCESSION AF069530 NID g3643814 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 836) AUTHORS Ghabrial,A., Ray,R.P. and Schupbach,T. TITLE okra and spindle-B encode components of the RAD52 DNA repair pathway and affect meiosis and patterning in Drosophila oogenesis JOURNAL Genes Dev. 12 (17), 2711-2723 (1998) MEDLINE 98402481 REFERENCE 2 (bases 1 to 836) AUTHORS Ray,R.P. and Schupbach,T. TITLE Direct Submission JOURNAL Submitted (01-JUN-1998) Department of Molecular Biology, Howard Hughes Medical Institute, Princeton University, Princeton, NJ 08544, USA FEATURES Location/Qualifiers source 1..836 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3R" /map="88B" mRNA join(<38..78,204..688) /gene="c550" /product="9 kD basic protein" exon <38..78 /gene="c550" /number=1 gene <38..688 /gene="c550" exon 204..688 /gene="c550" /number=2 CDS 242..487 /gene="c550" /codon_start=1 /product="9 kD basic protein" /db_xref="PID:g3643815" /translation="MSQAPVRVSPLIKFGRWSLLLVGIAYGAAHQSRLSKKEEKLREI EAQQKAVRDAKLAEEKKRSAEAEARALAELSKPTPKH" polyA_signal 672..677 /gene="c550" BASE COUNT 237 a 184 c 202 g 213 t ORIGIN 1 tatcgatagc cgcctgtcag ttttgacagc tgttttaagg ttatactgcg ctgccgttgc 61 aatcgctcca ccaatttggt aattttgctt atttaacatc aaatattgca taaaactagg 121 aaaaccagga atctgtaaag tggagcgaga cggggaacgc tattaaggaa gtcggataac 181 taaagtacat ccttttcttg cagttcacgg tcggacaatt acataacttg aagaagaaac 241 catgtcgcag gctcccgttc gcgtttcccc gctgatcaag ttcggcagat ggtccctgct 301 cctggtgggc attgcctacg gcgccgccca ccagagccgc ctgtccaaga aggaggagaa 361 gttgcgcgag atcgaggcac agcagaaggc cgtccgtgat gccaagctcg ccgaggagaa 421 gaagcgcagc gcagaggctg aggcccgtgc cttggctgag ctttcgaagc ccactcccaa 481 gcactaggat ccttcaggat gcaacatccg cagttccctt agcttaaaaa cattgaaaaa 541 ccacaacatt tacacacgaa gttcgcccaa aaggaggagc atcatcgata gtggagccac 601 catctatcga tcactgacta tcgtttttgt gttttcctct gatgcttgtg caaaaaacag 661 aatgttcgaa attaaatgat tgaaacaaaa ccattatgta aatactctca agtgtttcgt 721 gtttgtgatt aagtggtgtt cactggaaat atatttatat tagcatagtg tttggatagg 781 agaggattga gagaatttga gagggtttga gctccaaatt tgactaggaa gtacat // LOCUS DM1731L3 346 bp DNA INV 12-SEP-1993 DEFINITION Drosophila retrotransposon 1731 3' long terminal repeat (LTR). ACCESSION X04874 NID g7486 KEYWORDS copia-like element; long terminal repeat; retrotransposon; unidentified reading frame. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 346) AUTHORS Peronnet,F., Becker,J.L., Becker,J., d'Auriol,L., Galibert,F. and Best-Belpomme,M. TITLE 1731, a new retrotransposon with hormone modulated expression JOURNAL Nucleic Acids Res. 14 (22), 9017-9033 (1986) MEDLINE 87066773 COMMENT Data kindly reviewed (29-APR-1987) by M. Best-Belpomme. FEATURES Location/Qualifiers source 1..346 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone_lib="manialis" gene 1..346 /note="1731 element" /gene="1731" /allele="" /db_xref="FlyBase:FBgn0000007" repeat_region 11..27 /note="direct repeat 1" misc_feature 11..346 /gene="1731" /note="3' LTR" /db_xref="FlyBase:FBgn0000007" repeat_unit 11..16 /gene="1731" /note="inverted repeat A" /db_xref="FlyBase:FBgn0000007" repeat_region 39..45 /note="direct repeat 1" misc_feature 55..62 /gene="1731" /note="region homologous to SV40 enhancer sequence" /db_xref="FlyBase:FBgn0000007" misc_feature 85..90 /gene="1731" /note="seq. homologous to glucocorticoid and progesterone receptor binding region in MTV LTR" /db_xref="FlyBase:FBgn0000007" promoter 120..126 /gene="1731" /note="put. TATA-box" /db_xref="FlyBase:FBgn0000007" CDS 147..287 /gene="1731" /note="open reading frame (AA 1-46)" /codon_start=1 /db_xref="FlyBase:FBgn0000007" /db_xref="PID:g7487" /db_xref="FLYBASE:FBgn0000007" /translation="MKLAFLCVSVSVSNKTSSCSDARLKTFYFAFTHSAFALNALSLG ED" misc_feature 186..191 /gene="1731" /note="put. polyA signal" /db_xref="FlyBase:FBgn0000007" misc_feature 218..219 /gene="1731" /note="region of polyA site" /db_xref="FlyBase:FBgn0000007" repeat_unit 341..346 /gene="1731" /note="inverted repeat A'" /db_xref="FlyBase:FBgn0000007" BASE COUNT 94 a 66 c 72 g 114 t ORIGIN 1 gaggaagggc tgttgaatat aggcaatgcc cacatgtgtg ttgaatatag gcaatttcca 61 catgtgcata tgtaattttg tatgagaaca tacatacata cacatgaact gtatgtatgt 121 atatatatta gcaaataagc agccgcatga agctggcatt tttatgtgta tcagtttcag 181 tttcaaataa aacttcttcg tgttcggacg ctcggctcaa gactttttat ttcgcgttta 241 ctcattcggc ctttgctctc aatgcgctga gtttgggtga agattaggat cttcccatta 301 tggttgtcag tgttccacac tgggagcacc ttttcaacaa accaca // LOCUS DMACTR66B 1257 bp DNA INV 17-OCT-1994 DEFINITION D.melanogaster AcTr66B gene for actin-related protein. ACCESSION X71789 NID g558567 KEYWORDS actin-related protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1257) AUTHORS Fyrberg,C. and Fyrberg,E. TITLE A Drosophila homologue of the Schizosaccharomyces pombe act2 gene JOURNAL Biochem. Genet. 31 (7-8), 329-341 (1993) MEDLINE 94099775 REFERENCE 2 (bases 1 to 1257) AUTHORS Fyrberg,E.A. TITLE Direct Submission JOURNAL Submitted (04-MAY-1993) E.A. Fyrberg, The Johns Hopkins University, Charles and 34th St, Baltimore, Maryland 21218, USA REMARK revised by [3] MAT REFERENCE 3 (bases 1 to 1257) AUTHORS Fyrberg,E.A. TITLE Direct Submission JOURNAL Submitted (17-OCT-1994) E.A. Fyrberg, The Johns Hopkins University, Charles and 34th St, Baltimore, Maryland 21218, USA COMMENT On Oct 18, 1994 this sequence version replaced gi:297564. FEATURES Location/Qualifiers source 1..1257 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /chromosome="3L" /map="66B" gene 1..1257 /note="Actin-related protein 66B" /gene="Actr66B" /allele="" /db_xref="FlyBase:FBgn0011744" CDS 1..1257 /gene="Actr66B" /codon_start=1 /product="actin related protein" /db_xref="PID:g558568" /db_xref="FLYBASE:FBgn0011744" /db_xref="SWISS-PROT:P32392" /translation="MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVG DTNTRRITKGIEDLDFFIGDEAFDRTGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLR AEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEE RTLTGIVVDSGDGVTDVIPVAEGYVIGSCIKHIPIAGRNITSLIQSLLREREVGIPPE QSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERF LGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRR LQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQ VCHTKAAYEEYGPSICRHNPVFGTMT" BASE COUNT 292 a 344 c 356 g 265 t ORIGIN 1 atggcaggca ggctaccggc atgcgtaatc gatgtgggca ccggctactc caaactggga 61 tttgccggga ataaagagcc gcagttcatt attccctcgg cgattgccat caaggagtcg 121 gcacgagtgg gagacaccaa cacacggcgc atcacaaagg gcatcgagga cctggacttc 181 ttcatcggcg atgaggcctt cgatcgcacc ggctactcca tcaagtatcc ggtgcgtcat 241 ggtctggtgg aggactggga cttgatggag cgctttctgg agcagtgcgt ctttaagtat 301 ctgcgcgccg agcctgagga tcactacttc ctgctgactg agccgccgct aaatacgccc 361 gaaaatcggg agtacaccgc ggagataatg tttgagacgt tcaacgttcc tggtctgtat 421 atcgccgtcc aggcggtgct tgccctagcc gccagttggg cctcccggtc cgcagaggag 481 cgtaccctta caggcatcgt ggtggacagc ggcgatggag tgaccgacgt catacccgtg 541 gccgagggct atgtgatcgg ctcctgcatc aagcacattc ccatcgcggg ccgcaatatc 601 acctcgttaa tccagagcct gctacgcgaa cgggaggtgg gcattccgcc ggaacagagc 661 ctcgagactg ctaaagcgat caaggagaag cactgctaca tctgtcccga tatcgccaaa 721 gaatttgcca agtacgacac ggagccgggc aagtggatac gcaactttag cggcgttaac 781 acggtaacca aggcgccgtt caatgtggac gtgggctacg agcgattcct gggacccgag 841 atcttcttcc atcccgagtt ctcaaacccc gactttacca ttccactgtc ggaaatagtg 901 gataatgtca tccaaaactg cccaatcgat gtgcggcgtc ctctatacaa taacattgtt 961 ctgagcggtg gatcaacgat gttcaaggac ttcggcagga ggttgcagcg agatatcaag 1021 cgatcggtgg acacacgtct ccggatcagc gagaatttgt ccgagggacg cattaagcca 1081 aaacccattg atgttcaggt gattacgcac cacatgcaga ggtacgccgt gtggtttgga 1141 ggcagcatgt tggcttcaac gcccgagttc tatcaggtgt gtcacacgaa ggctgcctac 1201 gaggagtatg gccccagcat ttgccgtcac aatcccgtct ttggcaccat gacataa // LOCUS DMAMYAG1 2107 bp DNA INV 28-APR-1995 DEFINITION Drosophila alpha-amylase gene (locus 1) and flanking regions. ACCESSION X04569 NID g7580 KEYWORDS amylase; amylase-alpha. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2107) AUTHORS Boer,P.H. and Hickey,D.A. TITLE The alpha-amylase gene in Drosophila melanogaster: nucleotide sequence, gene structure and expression motifs JOURNAL Nucleic Acids Res. 14 (21), 8399-8411 (1986) MEDLINE 87066719 COMMENT See for alpha-amylase gene 5'region (locus 2). FEATURES Location/Qualifiers source 1..2107 /organism="Drosophila melanogaster" /strain="Oregon-R" /db_xref="taxon:7227" gene 1..2107 /note="Amylase proximal" /gene="Amy-p" /allele="" /db_xref="FlyBase:FBgn0000079" misc_feature 230 /gene="Amy-p" /note="a is g in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 287 /gene="Amy-p" /note="g is c in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 293 /gene="Amy-p" /note="t is a in Canton-S" /db_xref="FlyBase:FBgn0000079" promoter 366..370 /gene="Amy-p" /note="CAAT-like sequence" /db_xref="FlyBase:FBgn0000079" misc_feature 375 /gene="Amy-p" /note="c is t in Canton-S" /db_xref="FlyBase:FBgn0000079" promoter 414..420 /gene="Amy-p" /note="TATA-like sequence" /db_xref="FlyBase:FBgn0000079" misc_feature 443..447 /gene="Amy-p" /note="pot. transcription initiation site" /db_xref="FlyBase:FBgn0000079" sig_peptide 478..531 /gene="Amy-p" /db_xref="FlyBase:FBgn0000079" CDS 478..1962 /gene="Amy-p" /codon_start=1 /db_xref="FlyBase:FBgn0000079" /product="alpha-amylase" /db_xref="PID:g790427" /db_xref="FLYBASE:FBgn0000078" /db_xref="SWISS-PROT:P08144" /translation="MFLAKSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAA ECENFLGPNGYAGVQVSPVNENAVKDSRPWWERYQPISYKLETRSGNEEQFASMVKRC NAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFNPTCAISNYND ANEVRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMWPADLAVIY GRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKSEYTGLGAITEFRHSDSIGKVFRG KDQLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFM LAHPFGTPRVMSSFSFTDTDQGPPTTDGHNIASPIFNSDNSCSGGWVCEHRWRQIYNM VAFRNTVGSDEIQNWWDNGSNQISFSRGSRGFVAFNNDNYDLNSSLQTGLPAGTYCDV ISGSKSGSSCTGKTVTVGSDGRASINIGSSEDDGVLAIHVNAKL" prim_transcript 478..1962 /gene="Amy-p" mat_peptide 532..1959 /gene="Amy-p" /db_xref="FlyBase:FBgn0000079" /product="alpha-amylase" misc_feature 907 /gene="Amy-p" /note="t is c in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1002 /gene="Amy-p" /note="t is c in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1018 /gene="Amy-p" /note="t is a in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1044 /gene="Amy-p" /note="c is t in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1049 /gene="Amy-p" /note="a is g in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1236 /gene="Amy-p" /note="c is a in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 1323 /gene="Amy-p" /note="c is t in Canton-S" /db_xref="FlyBase:FBgn0000079" misc_feature 2020..2025 /gene="Amy-p" /note="put. polyA signal" /db_xref="FlyBase:FBgn0000079" polyA_site 2045 /gene="Amy-p" /db_xref="FlyBase:FBgn0000079" BASE COUNT 526 a 651 c 527 g 403 t ORIGIN 1 aagcttcaaa ccaaaatcgc ttgctacctt tattttcaac atttttaggc gatattgcat 61 gatttcaatg ctttcaaata cgctaaaaaa tccaaataac aattcacagt aaacccgctc 121 ctaggagcgt gaacgtaata aatagtcaat aaattcccaa ctgaaaccga tttcaaagga 181 atgcattttc ccgatgagtt attgatacaa atataacgaa aataagccga ctcactaatc 241 atcagcgaaa aattgcgatc tccagtcaat acgtctgctc ggaattgtga tttgacaaac 301 taatcgccag tcagacccca tgcgtgaaaa aaccccttag ggagcgataa gatcccatgc 361 agtcacaaat cactccccgc gaagccctca gataaagtag cagtggggtc cactatataa 421 ggagcggctc tgagtagttc cgaccagagt gaaactgaac ttccatctgg aatcatcatg 481 tttctggcca agagcatagt gtgcctcgcc ctcctggcgg tggccaacgc ccaattcgac 541 accaactacg catccggtcg tagtggaatg gtccacctct tcgagtggaa gtgggacgac 601 atcgctgccg agtgcgaaaa cttccttgga cccaatggct acgccggtgt tcaggtctcc 661 cctgtgaacg agaacgccgt caaggacagc cgcccctggt gggaacgtta ccagcccatc 721 tcctacaagc tggagacccg ctccggaaac gaagagcagt tcgccagcat ggtcaagcgc 781 tgcaacgccg tcggagtgcg cacctacgtg gacgtggtct tcaaccacat ggccgccgac 841 ggaggcacct acggcactgg cggcagcacc gccagcccca gcagcaagag ctatcccgga 901 gtgccctact cctcgctgga cttcaacccg acctgcgcca tcagcaacta caacgacgcc 961 aacgaggtgc gcaactgcga gctggtcggt ctgcgcgacc ttaaccaggg caactcctac 1021 gtgcaggaca aggtggtcga gttcctggac catctgattg atctcggcgt ggccggattc 1081 cgcgtggacg ccgccaagca catgtggccc gccgacctgg ccgtcatcta tggccgcctc 1141 aagaacctaa acaccgacca cggcttcgcc tcgggatcca aggcgtacat cgtccaggag 1201 gtcatcgaca tgggcggcga ggccatcagc aagtccgagt acaccggact gggcgccatc 1261 accgagttcc gccactccga ctccatcggc aaggtcttcc gcggcaagga ccagctgcag 1321 tacctgacca actggggcac cgcctggggc ttcgctgcct ccgaccgctc cctggtattc 1381 gtcgacaacc acgacaatca gcgcggacat ggagcaggag gcgccgacgt tctgacctac 1441 aaggtgccca agcagtacaa gatggcctcc gccttcatgc tggcgcaccc cttcggcact 1501 ccccgcgtga tgtcctcctt ctccttcacg gacaccgatc agggcccgcc caccaccgac 1561 ggccacaaca tcgcctcgcc catcttcaat agcgacaact cctgcagcgg cggctgggtg 1621 tgtgagcacc gctggcgcca gatctacaac atggtggcct tccgaaacac cgtgggctcg 1681 gacgagatcc agaactggtg ggacaacggc agcaaccaga tctccttcag ccgaggcagc 1741 cgcggcttcg tggccttcaa caacgacaac tacgacctga acagctccct gcagacgggc 1801 ctgcccgccg gcacctactg cgacgtcatc tccggctcca agagcggttc ctcctgcacg 1861 ggcaagaccg tcaccgtcgg atccgacgga cgggcttcca tcaacattgg cagctccgag 1921 gacgacggag tgctggccat tcacgtcaac gccaagttgt aaacagctgg ggagcatggc 1981 gaacagccag gcaattaatt gagattatta attgtacgaa atatatatga tgagattata 2041 aacacacaac acttttattc gcaagggatg ataagatcta atatatatat tatctgggct 2101 aagctga // LOCUS DMANGEL 2910 bp DNA INV 14-AUG-1996 DEFINITION D.melanogaster angel gene. ACCESSION X85743 NID g1487951 KEYWORDS angel gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2910) AUTHORS Kurzik-Dumke,U. and Zengerle,A. TITLE Identification of a novel Drosophila melanogaster gene, angel, a member of a nested gene cluster at locus 59F4,5 JOURNAL Biochim. Biophys. Acta 1308 (3), 177-181 (1996) MEDLINE 96404965 REFERENCE 2 (bases 1 to 2910) AUTHORS Kurzik-Dumke,U. TITLE Direct Submission JOURNAL Submitted (20-MAR-1995) U. Kurzik-Dumke, Institut fur Genetik, Johannes-Gutenberg-Univ., Becherweg 32, D- 55099 Mainz, FRG FEATURES Location/Qualifiers source 1..2910 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /dev_stage="embryo" /clone_lib="cDNA library lambda gt10" /clone="11F" /chromosome="2, band 59F5" TATA_signal 1478..1484 gene 1804..2868 /note="angel" /gene="angel" /allele="" /db_xref="FlyBase:FBgn0016762" CDS 1804..2868 /gene="angel" /codon_start=1 /product="ANGEL 39" /db_xref="PID:e157039" /db_xref="PID:g1487952" /translation="MYRSLLHNVSLKATSRIIRRSVSSQAKGASGKRKQKTKEMESSH DRNRRWTSLGNQAEGRDPHKCSSFKVVSYNILAQDLLLEHLFLYVGIPHEFLSWQRRQ QNLLRELLKLDPDILCLQEMQFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDGCAIV YDSSKFELLDHQAVELYDQAVALLNRDNVALFARFRFKKQQEQQKEFVVATTHLLFNT KRSDVRCAQVERILEELQSFSTDTPIVLTGDFNSLPDSSPIEFLVGKNGDVDSTACPE PLHFEIIDSGEGTASTYQNEWVIVDYILRSLGSRSRHKLLPLSVYSLPSINRCIGAGQ IPNYRLGSDHYALGAVFTAV" BASE COUNT 723 a 707 c 781 g 699 t ORIGIN 1 ggatccactg cctgcgaggc ctgcgcctgc tgtggcgttg tggggcaact gatgctcaga 61 ttgttaccaa aatggcgcag cgacgtggct tggccatcat taatttctat ggtcaaattg 121 gaagcgggct gaaagatcaa tcattactca gtttcaacaa caatcttata tttgaagtgc 181 gtttcagaaa gcgatggatg agtacagtgt ggtagtggct atttacagaa tgtacagtgt 241 cagaaatcag atgcaagcgg aagccttaag ctttagtggg agtcaacaaa aatctctacc 301 ttggttgtaa agcgctggct ctgcttcttt ttcggcgtac tctggttggc cggctcaggt 361 tcaatttgcc cggagccgta atcgttggtc acgaaggagc tgccggcgct gcccgctcca 421 accaaactgt aatctgcgta gagctgctcg ggcatgtcat acgaaacgga atccatattg 481 gaagtattct gtaatgggct ttggcttaga aatgtgacaa attgtaaaaa ctgcaatggc 541 acttacattg ggcacctttt ctgggcgatc caacaccagt tcactgcggc agagattgtc 601 caagaagatc tcgctgcgct gcagagagag ttctgaacga gaaagattcc ggttctgctt 661 gggcggcgaa tgctgctcac tgatattgtt caaggattgg tgggcatgtg gcgaaggcaa 721 ctttaacttc ggctggcgaa tcacagagac tcagtgtctg actagctgag cacgaggatt 781 ccgtccactc ggctcctcgg gcagaggcat gaactggaag aagttgccgt tcttcaggga 841 ttcgtggaga aaagtgaccc aaagctacag gctgctgagg agcagttgat tgtggtgaaa 901 ccatctgggt gcttagctgc gctggattcg actgggtgca gcttttaggt tgtaccgcct 961 gatcaagaac aatatgtgtt gttataggcg gcgaaaagga atgagtactt ttctgtggct 1021 gaatagcttg gaaactaatc tgaggcttat ccactggctt catttgcggt gagttcttcg 1081 gcgtcttttg caccctggcg tacatggcac tgatgtcatc gcgcgaggtc gacggagcag 1141 gcacagaccc actcacatac gcggtggagc tttccgtagg agtcggcgtg tggtctataa 1201 tctgtgccgc ggtcctaacc tcgtggtggg gactccctct aatccgcagg cagtcttcct 1261 caatctccga gtaaatgggc tcgctgtcga aatcgcgctg ttgccgtgtg gtggccaacg 1321 atgtggttgc accactgctg ggtccgtctg tgcagtcgta gctctcggtt tgaagatggc 1381 tgatctgagg ctcatggcgg tcaaagcggg agcagtcctg caatcgattg aaattatact 1441 cttattattg aaatacaaac catattaacg atatatttat aaaagaagag ccttattact 1501 tggatcaata aaccaatgat taactaaatc tatttgacca gaaagttagt aagaacgaat 1561 cttgcaatgc tacttcgaga tacacttttt taaatttcga tagaccgagt accgccccgt 1621 tatcgatatc agctgcaatg cagcccagcg aaggaaggcg caaaacaaga agtgaaaaca 1681 gctgacagca gcagatttct ttcctccact cggaaattca gacgccatcc aaaaacacta 1741 aagaaacaag aggctttcaa ggggaccagg agctcgggct tatggggagg cgcacctggt 1801 gagatgtaca ggtctctgct gcacaacgtt tcactcaagg cgacatcaag gatcatcagg 1861 cgcagcgtga gcagccaggc aaaaggagcc agcggaaagc gcaaacaaaa aacgaaggag 1921 atggagtcga gccacgatcg gaatagacgc tggacgtcat tggggaatca ggctgagggt 1981 cgagacccgc acaagtgctc ctccttcaag gttgtctcat ataacatcct ggcccaggat 2041 ctgcttctgg agcacctctt cctgtacgtg ggaatcccgc atgagttcct cagctggcaa 2101 cgccgccagc agaaccttct cagggaactg ctcaaactgg atccggacat actgtgcctg 2161 caggagatgc agttcgacca ccttccagtg ctcgtccaac gactgcgtat gggcaacggc 2221 aagaagttgg cttatgtgta caaaaagaag accggctgtc gaacggacgg atgcgctatt 2281 gtctacgact cctcaaagtt tgagttgcta gaccaccaag cagtggagct gtacgaccag 2341 gcggtggctc tactcaatcg cgacaatgtg gccttgtttg ccaggttccg attcaaaaag 2401 cagcaggagc agcagaagga attcgtggtc gccaccacgc acttgctgtt caacacgaaa 2461 cggagcgatg tccgttgcgc ccaggtggaa agaattctgg aggagctgca gtcgttctcc 2521 accgacacac ctatcgtcct gactggtgac tttaacagtc tgcccgactc ctcgcctatt 2581 gaattcctcg ttggcaagaa tggggatgtg gattccacag cttgcccaga acccctgcat 2641 ttcgagatca tcgattcggg cgaaggtact gcctccacat accagaacga atgggttatc 2701 gtggactaca tcctgcgctc gctaggatcg cggagcaggc acaagctctt gcctctcagc 2761 gtctactcac tgccctcaat caaccggtgc atcggggcgg gacagatccc caattaccgt 2821 ctggggtcgg atcactacgc cttgggtgca gtattcaccg ccgtctagta tttaatctct 2881 tcatgctttc ttggactcat caataaaggt // LOCUS DMAPTER 4112 bp DNA INV 04-MAR-1997 DEFINITION D.melanogaster apterous gene for developmental regulatory protein. ACCESSION X65158 NID g7600 KEYWORDS apterous gene; developmental regulation protein; LIM motif. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4112) AUTHORS Cohen,S.M. TITLE Direct Submission JOURNAL Submitted (24-MAR-1992) S.M. Cohen, HHMI BAYLOR COLLEGE OF MEDICINE, 1 BAYLOR PLAZA, HOUSTON TX 77030, USA REFERENCE 2 (bases 1 to 4112) AUTHORS Cohen,B., McGuffin,M.E., Pfeifle,C., Segal,D. and Cohen,S.M. TITLE apterous, a gene required for imaginal disc development in Drosophila encodes a member of the LIM family of developmental regulatory proteins JOURNAL Genes Dev. 6 (5), 715-729 (1992) MEDLINE 92249766 REFERENCE 3 (bases 1 to 4112) AUTHORS Averof,M. and Cohen,S.M. TITLE Evolutionary origin of insect wings from ancestral gills JOURNAL Nature 385 (6617), 627-630 (1997) MEDLINE 97177107 FEATURES Location/Qualifiers source 1..4112 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="9-11 hour embryo" /clone_lib="cDNA, K.Zinn" /clone="cAP A, cAP B8, cAP F, cAP G" /map="polytene band 41F8-42A1" prim_transcript <1..4098 gene 952..2361 /note="apterous" /gene="ap" /allele="" /db_xref="FlyBase:FBgn0000099" CDS 952..2361 /gene="ap" /codon_start=1 /product="developmental regulatory protein" /db_xref="PID:g7601" /db_xref="FLYBASE:FBgn0000099" /db_xref="SWISS-PROT:P29673" /translation="MGVCTEERPVMHWQQSARFLGPGAREKSPTPPVAHQGSNQCGSA AGANNNHPLFRACSSSSCPDICDHSTKPFGNAYGTESFRSYETADRATFEDSAAKFSI SRSRTDCTEVSDETTSGISFKTEPFGPPSSPESTSDSKITRNLDDCSGCGRQIQDRFY LSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGTRRCSRCLASIS SNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHYSIAREGDTASSS MSATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPARQKGRPRKR KPKDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRMRTSFKHHQLRTMKSYFAINHNP DAKDLKQLSQKTGLPKRVLQVWFQNARAKWRRMMMKQDGSGLLEKGEGALDLDSISVH SPTSFILGGPNSTPPLNLD" misc_feature 1387..1572 /gene="ap" /note="LIM domain 1" /db_xref="FlyBase:FBgn0000099" misc_feature 1573..1758 /gene="ap" /note="LIM domain 2" /db_xref="FlyBase:FBgn0000099" misc_feature 2047..2227 /gene="ap" /note="homeodomain" /db_xref="FlyBase:FBgn0000099" BASE COUNT 1201 a 970 c 874 g 1067 t ORIGIN 1 gacggctggt tgtcctcacg attttaagta gatcagctgc agaccaaagt cggtagtcga 61 gtttcgaatt taagtcggtt tttgtttttg gaagcggtgc gcgtattcga tttttgtttt 121 gacttgagct cggctgtagt ttcggtttgc cagaactgga tcgaaggaga atcgacacag 181 aaacagggag ttggcgaaac ggatacaaaa ctgaagttgg atcggtaatc gcctgcccgg 241 tcataaacaa caacacaagg gagcacagcc gcatacgcat acgcgcctct gtctctaatg 301 ccttatcagt aacaggcatc gtcgagagtc gtaggaagag cccgacaaag gccgaccttt 361 accactcaat ttggatctga tgtgccattc tcgcgctgtc tcgtaaatta atgtcataaa 421 ttaactttag atttcttacg ctaaccggtg gtcgtcagcg gtccgaaaac gcctttgcgc 481 tcgagataca ggggcggtcc ctaatcaata caaatatcct acctgccgcc gagtcaagtg 541 ttttagtgag tgtgtgaccc tatgttcctt atattacctt ggtgctaagg agaaagttta 601 aaaaaagcgg cattcaaatc gtagtttgtg caataagaaa aggcaagcca atggtgtcaa 661 tctctaagac aacgccgaag tgatgcatgt ccgcaaagta atagatcaag ttgtgcgcac 721 acttatttcc ggcgagccta gccgggcatc taatcgtggc cagtgtcaag tgtccaatag 781 cacatctagc cggggtctag aggattaccc aagaccaacg tagcaccgca gcccttttaa 841 ggaggcataa ggctcgcaag acacaacgca cagcctacac aacgacaaac ataacacgac 901 cgacggacat catccttgga aatagacctc gtgtcattcc aaaagacgca catgggcgtc 961 tgcaccgagg agcgccctgt gatgcattgg cagcagagcg caagatttct tgggcccggc 1021 gcaagggaga aaagtccaac accacctgta gcacatcaag ggagcaatca atgtggcagt 1081 gctgcaggtg caaataacaa tcacccattg ttccgcgcgt gctcctcatc ctcgtgtcca 1141 gatatttgtg atcatagtac aaagccattt ggcaacgctt acggcaccga gtcatttaga 1201 agctacgaaa cagccgatcg tgctaccttt gaggactcag ccgccaaatt ctccatcagc 1261 cgcagtcgaa cagactgcac ggaggtcagc gacgagacga cgtcgggcat atcattcaag 1321 accgaaccct tcggaccgcc cagcagtccc gagtccacaa gcgatagcaa aataacgcgc 1381 aacctcgacg actgctccgg ctgcggacgt cagatacagg atcgcttcta cctctccgct 1441 gtggaaaaac ggtggcatgc aagttgccta cagtgctacg cctgtcggca gccgctggaa 1501 cgggaatcct catgctactc acgtgacggc aacatttatt gcaaaaacga ttattatagt 1561 ttttttggta ctcgccgatg ctcgcgctgc ctggcctcca tcagctccaa cgagctggtc 1621 atgcgcgcca gaaatcttgt ttttcacgtc aactgcttct gctgcactgt ctgccacacg 1681 ccactgacaa agggagacca gtacggcatc atcgacgccc tcatctactg caggacccac 1741 tacagcatag ccagggaggg ggataccgcc tcatccagta tgagcgccac ctacccgtac 1801 agcgcccagt tcggctcacc ccacaacgac tcctcgagcc cgcactcgga ccctagtcgg 1861 agcattgttc ctacgggcat ctttgtgccc gcgtcccacg taatcaacgg actgccgcag 1921 ccagctcgtc aaaagggcag gccccgcaag cgcaagccca aggacatcga ggcgttcacc 1981 gctaacatag atctcaacac tgagtacgtg gactttggcc gaggctcgca cctaagctcc 2041 tcgtcgcgca ccaaacgaat gcgaacctcg tttaagcatc accagctgcg taccatgaag 2101 tcctactttg ccattaatca taaccctgat gcaaaggatc taaaacaatt gtcacagaaa 2161 actggtttac caaagagggt cctacaggtc tggtttcaaa atgcaagggc caaatggcgc 2221 cgcatgatga tgaagcagga tggcagcggc ctgctggaga agggcgaagg cgctctggac 2281 ctcgacagca tctccgtgca cagtcctacg tcgtttatat tgggaggacc gaacagcaca 2341 ccgccactta acttggacta acggatgctc aggaaacgcg aaaacaaaat gatagtgaca 2401 aaggaaatgg gcgcagcagt cacctccgac atcatacgtt cttatgccag ttgtctattc 2461 gcgtgcctca tacacagtcc cggacccggc ttgactactg aatccggata cttgtctaga 2521 tcaagcacgg ctagctcttg aatgctatgg gctgccttgt cggatgggaa tcaatttgga 2581 aagcttgtct tgtgttcaaa atcgaaaaat tgattcatcc acacgttaaa cgcccgggaa 2641 acgcctcgga aaatgctaag aaaatatgta tttttgtatt tgcctattga ccgtttccag 2701 cactactcgc ctcgtccttg ccccacatgt tgtttctata gttttaacgt tcacttgtaa 2761 atatgtactg taatcacata gtttatttca aacgcatcca tattagcctg actcccctgt 2821 tttttgtatt cttttaaagc gcagaatatc aattcgaaca ttgaaattat gaatcaaaag 2881 aaggtggatt catgcaaaga ttaccaactt gtaacgttct ttctaaaact gtcataataa 2941 ttaagaaaac acaacttcgt taaatttcaa tttgtataga aaatagttat gttactatac 3001 cagtcaaaat ttttaaacat caaacatgca gaatttacga attaaagtat gactaaaaac 3061 ttttaaatac caaacagcga aacgtgtgat attttaaatt tgtttttttc tttttcagtg 3121 acacgactaa aagatacccg ttacattgta aaataatctt gccaatatag atgcggccag 3181 gtcatgccct tcctcatatg aattgcccgc tggcaatgtt tttaccaagc tttcaccttc 3241 cgattaggtt tggtggtcat ttaagtaaat tccgatttaa actttgtttt taatacggga 3301 gcgtgtcact tcctttcggt ataaaaacat aggtgaggaa aagtttgagg ccaaccttac 3361 ggcgcaccaa gcggcacaca aatgaaatga aattctttag cttctatagt agtcgaaaaa 3421 cgatccttat caagcataaa tgcttatatc tcctgtaaca ttctttttga ccagtctagt 3481 ttacacgtat gttctacgag gaacggaccg attgtcctat gagagctata ggttttacca 3541 tatgtatatg catgcattac ttcagctcca tctctttttg attcataaac gtataatggt 3601 ttgagagtaa acattttgtg gcgtatatag ttcaagttta catatttaga gtacggtgcc 3661 caagacgcgc tttaaaaata ttaaaacggg ttgttaatga agtcccatat gtataattgt 3721 ctaggtacat ggatattgtt aatatattat tatttttatt taaagagctc tcaacaatat 3781 gtatgaagaa atctgcgtat atcaacatat aatgaaatgc tgatgcattc gtattatata 3841 tatgtaacta atatttattg cccaaattta atagttagag acgaatttag tttagaacag 3901 actatacaat aaagtccata tgtacatgta gtattacggt aaagtaatag cttcgctcaa 3961 gcatacgacc aggttcgtaa gctattaata cgaaactgta attataatca aatcagtaaa 4021 cactggaaga tttgtactta caaatagtta actcataagt cttaccatag aagcttaaat 4081 aaaacgtatt caagcaaaaa aaaaaaaaaa aa // LOCUS DMARM 4770 bp DNA INV 12-SEP-1993 DEFINITION D.melanogaster arm E16 and E9 genes for armadillo protein. ACCESSION X54468 NID g7610 KEYWORDS armadillo protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4770) AUTHORS Riggleman,B.C. TITLE Direct Submission JOURNAL Submitted (17-AUG-1990) Riggleman B.C., Princeton University, Dept. of Molecular Biology, Lewis Thomas Labs, Princeton, NJ 08544-1014, USA REFERENCE 2 (bases 1 to 4770) AUTHORS Riggleman,B., Wieschaus,E. and Schedl,P. TITLE Molecular analysis of the armadillo locus: uniformly distributed transcripts and a protein with novel internal repeats are associated with a Drosophila segment polarity gene JOURNAL Genes Dev. 3 (1), 96-113 (1989) MEDLINE 89211895 COMMENT *map: chromosome=X; map position=2B17; Sequence is composite of genomic (intergenic DNA, exon 1 and intron I) and cDNA (exons 2-7). The Drosophila armadillo gene is homologous to the human plakoglobin gene. FEATURES Location/Qualifiers source 1..4770 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="embryonic" /clone_lib="Oregon R EMBL4 genomic, Kauvar embryonic cDNA" mRNA <1..52 /gene="arm" /note="G42 gene" /db_xref="FlyBase:FBgn0000117" gene 1..4770 /note="armadillo" /gene="arm" /allele="" /db_xref="FlyBase:FBgn0000117" mRNA 672..777 /gene="arm" /note="arm E16, exon 1" /db_xref="FlyBase:FBgn0000117" intron 778..1780 /gene="arm" /note="arm E16, intron I" /db_xref="FlyBase:FBgn0000117" mRNA 1299..1439 /gene="arm" /note="arm E9, exon 1" /db_xref="FlyBase:FBgn0000117" intron 1440..1780 /gene="arm" /note="arm E9, intron I" /db_xref="FlyBase:FBgn0000117" mRNA 1781..4765 /gene="arm" /note="arm E16, exons 2-7" /db_xref="FlyBase:FBgn0000117" mRNA 1781..4746 /gene="arm" /note="arm E9, exons 2-7" /db_xref="FlyBase:FBgn0000117" CDS 1810..4341 /gene="arm" /note="armadillo protein" /codon_start=1 /db_xref="FlyBase:FBgn0000117" /db_xref="PID:g7611" /db_xref="FLYBASE:FBgn0000117" /db_xref="SWISS-PROT:P18824" /translation="MSYMPAQNRTMSHNNQYNPPDLPPMVSAKEQTLMWQQNSYLGDS GIHSGAVTQVPSLSGKEDEEMEGDPLMFDLDTGFPQNFTQDQVDDMNQQLSQTRSQRV RAAMFPETLEEGIEIPSTQFDPQQPTAVQRLSEPSQMLKHAVVNLINYQDDAELATRA IPELIKLLNDEDQVVVSQAAMMVHQLSKKEASRHAIMNSPQMVAALVRAISNSNDLES TKAAVGTLHNLSHHRQGLLAIFKSGGIPALVKLLSSPVESVLFYAITTLHNLLLHQDG SKMAVRLAGGLQKMVTLLQRNNVKFLAIVTDCLQILAYGNQESKLIILASGGPNELVR IMRSYDYEKLLWTTSRVLKVLSVCSSNKPAIVDAGGMQALAMHLGNMSPRLVQNCLWT LRNLSDAATKVEGLEALLQSLVQVLGSTDVNVVTCAAGILSNLTCNNQRNKATVCQVG GVDALVRTIINAGDREEITEPAVCALRHLTSRHVDSELAQNAVRLNYGLSVIVKLLHP PSRWPLIKAVIGLIRNLALCPANHAPLREHGAIHHLVRLLMRAFQDTERQRSSIATTG SQQPSAYADGVRMEEIVEGTVGALHILARESHNRALIRQQSVIPIFVRLLFNEIENIQ RVAAGVLCELAADKEGAEIIEQEGATGPLTDLLHSRNEGVATYAAAVLFRMSEDKPQD YKKRLSIELTNSLLREDNNIWANADLGMGPDLQDMLGPEEAYEGLYGQGPPSVHSSHG GRAFHQQGYDTLPIDSMQGLEISSPVGGGGAGGAPGNGGAVGGASGGGGNIGAIPPSG APTSPYSMDMDVGEIDAGALNFDLDAMPTPPNDNNNLAAWYDTDC" intron 1840 /gene="arm" /note="intron II" /db_xref="FlyBase:FBgn0000117" intron 3480 /gene="arm" /note="intron III" /db_xref="FlyBase:FBgn0000117" intron 3681 /gene="arm" /note="intron IV" /db_xref="FlyBase:FBgn0000117" intron 3954 /gene="arm" /note="intron V" /db_xref="FlyBase:FBgn0000117" intron 4051 /gene="arm" /note="intron VI" /db_xref="FlyBase:FBgn0000117" BASE COUNT 1183 a 1214 c 1189 g 1184 t ORIGIN 1 ggatccgccg ccagctgctg tgaccataac cgatgaaccc acttctacga ctgcataaac 61 caatattgct tgcccaactt aaatatgtat taagaaatta aagaccagtg tttgaatact 121 ttggaaattt aaaaagtgcg ctttctattt tgaagcaagt tggcagccac ctgcgataga 181 ggagttatcg gttatctgtt ctgcgctcat atacacagtt ttcatagtcg gggatttttg 241 tcgaatttaa atatctaagt gcgtcaaaag tgcgttaacc tgcctttgag cagataaatt 301 tactttcgaa gcggtaagta atagtaaagt catagatatt tctttaattc gtcgcccaaa 361 aacaatagtt tttgggcgta cctgtgttgt catacaccct catgtacact caggtgcttg 421 tgttggtaaa tgtttataca agataaacgg tgagttcgag ataacatgta acatgaacta 481 gaaataaatc gccttagcta aattataaat attgtgaatt gagtttcttc cggatgaaat 541 gctatacaaa tttcgtgaga tttttgtgtt ctcagaacaa aaaaaatttg aaaaattcct 601 ttggcctatc gcacagggcc catcgagtta tcgggacagc agcaggccat cgctagttgg 661 gtttcgtcgc catatacaca gtttttctcg agcagacaat tcgctgttat tttgtttctt 721 atagcgtttt aaataaataa atcctgctct aaagcagact taaattcctt ggacgcggtg 781 agtactgtta gtcggtagtg aatccgtttg gaaagccaaa gtttctgtgt gccatgaaag 841 ttggaaagcc atggcaaaca agtcggcgcg ggggtgggca ggggttcgct ggatgtgcgc 901 ctgtgtatgt gtgtgtgtat gatctggata cacacaaacg gcatttttat gtattcctcc 961 ccgtaaatcg ggcgcttgtt ttgttgctcg ctggaatgta aacaatgcca cagacaggaa 1021 atcgttttct tcgaatctag aggcaggctt atcgttaggt gttttatcta atcgacaact 1081 gaaatggagt tgggattctt tctgagctgc ctacgcgagt atgtgtgtgt aggcacaatc 1141 gtttggatgt gtggcaactc tgcgcagcac tgcatttgta tgctgcactg ccgcggccct 1201 ttactttctc tcccagtctc tttccctgtc cctttcccgc actcgcacgc gcggtgttgc 1261 aagtgccttg ctttcgttgc gctctctcgc atctgtgatt ctgttccgtt taaacgagcg 1321 tgctggtcgg tcgcattttc ctggcgcctt tttcgagaga agtgaaaaat ccattttgtt 1381 ttttgttgga gtgcatgaga tttgaaagag tgctaaacaa agtaattaaa taactcaagg 1441 ttcgtggcca aagtcttcgg caggtagaca cacacatacc cacaaatacc cgttctacct 1501 gcgtaagaat gtattagtgc gtttgtttgt atacgcagca tatttcatat tatgcttcgg 1561 catctcaaag cggaaatgag ttaaaaaaaa agaccaacga ctagaataag tgactaacgg 1621 acgatatctg cgtctgttgg cagtctgcaa acacaacaag cccttctttc cggggccccc 1681 atttagtgga gttccgtggt ctccatccga agcacacacg aactccatgt tattgactgt 1741 ccagcacatt actcatatac tctccgtctc tttcttgcag gtgtggtgta aagcgcctca 1801 atcaccaaga tgagttacat gccagcccag aatcgaacca tgtcgcataa taatcaatac 1861 aatccacctg atctgccgcc gatggtatcc gccaaggagc agaccctcat gtggcagcag 1921 aattcgtact tgggcgactc cggcatccac tcgggtgccg tgacccaggt tccatcgctg 1981 tctggcaagg aggacgagga gatggaggga gatccactta tgttcgacct ggacaccggt 2041 ttcccgcaga atttcacaca agaccaagtg gacgatatga accagcaact gagccagaca 2101 cgctcccaac gtgtacgtgc tgccatgttt ccggaaaccc tggaggaggg cattgagatt 2161 ccctccaccc agtttgatcc ccaacagccg acggcagtgc aacgtctttc ggaaccgtca 2221 caaatgctaa agcacgcggt ggtcaatctg atcaactacc aggacgacgc tgagctggca 2281 accagggcca tacccgagtt gatcaagctg ctgaacgatg aggatcaggt ggtagtttcc 2341 caggccgcca tgatggtcca ccagctgtct aagaaggagg cctcgcgaca tgccattatg 2401 aacagccctc agatggtagc cgctttggtg cgtgccatct ctaacagcaa cgatctggag 2461 agcaccaagg cagcggtagg aacactgcac aacttatcac accatcgcca gggtctgctg 2521 gccatcttca agagtggcgg catcccggca ctcgtcaagt tgctctcctc gccagtggag 2581 agtgtgctgt tctatgcaat taccactctg cacaatttgc tgctccacca ggatggctct 2641 aagatggctg tgcgcctggc cggcgggctt cagaagatgg ttactctgct gcaacgaaac 2701 aacgttaagt ttctggctat cgtcacagat tgcttgcaaa ttctggccta tggtaaccag 2761 gagagcaagt taataattct tgcctccgga gggcccaacg aactcgtgcg cattatgcgc 2821 tcctacgact acgagaagct tctgtggacc acttcgcggg tactgaaagt gctctccgtt 2881 tgctccagca acaagccggc catcgtggat gccggtggaa tgcaggcgct ggctatgcac 2941 ttgggtaaca tgtcaccgcg ccttgtgcaa aactgtttgt ggacgctccg caatctttcg 3001 gatgcagcca ctaaggtgga gggccttgaa gctttgctcc aatctctcgt ccaggttctg 3061 ggctcgaccg atgtcaacgt ggtcacctgt gccgccggta tcctttcaaa tctgacgtgc 3121 aacaatcagc gcaacaaggc caccgtttgt caggtgggcg gtgtggacgc cctcgtccgt 3181 actattatca atgctgggga tcgcgaagag attaccgagc cggctgtatg tgccctgcgt 3241 cacttgacct cgcgtcatgt ggactctgag ttggcccaga atgccgttcg cttaaactac 3301 ggactatcgg tgattgtaaa gctattgcat ccaccatcac gctggccctt gatcaaggcc 3361 gtcattggac tcatacgcaa tttggccctc tgtccggcca atcacgcccc gttgcgggag 3421 cacggggcca tccaccatct ggtgcgactg cttatgcgcg ccttccaaga cacagagagg 3481 caacgttcct cgatagccac cactggttca cagcagccgt ccgcatacgc tgacggcgtt 3541 cgcatggagg agattgtcga gggcacggtg ggggcgctac atatcctggc ccgcgagtct 3601 cacaaccggg cactcattcg ccagcagtcg gtaataccga tctttgtacg attgctgttc 3661 aacgaaatcg agaacataca gcgcgtggct gctggcgttc tttgtgagct cgccgctgac 3721 aaggagggcg ccgagattat cgagcaggag ggcgccactg ggccgctgac cgatctcctg 3781 cactcgcgca atgaaggcgt ggccacatac gccgccgctg ttctctttcg catgagtgag 3841 gacaagccgc aggattacaa gaagcggcta tccatagagc tgaccaactc gctgctgcgc 3901 gaggacaaca acatatgggc caatgccgac ctgggcatgg gtcccgatct acaggatatg 3961 cttggaccag aagaagcata tgagggcctg tacggacaag gtccgcccag cgtgcacagt 4021 tcacacggag gtcgcgcatt ccatcagcaa ggatatgata ctctaccaat agattcgatg 4081 cagggtctgg agatcagcag cccagtgggc ggcggcggtg ctggcggtgc tcccggcaat 4141 ggtggagctg taggcggagc tagcggcggc ggtggtaaca tcggcgccat tccgcctagc 4201 ggcgcaccaa cttcgcccta ttccatggac atggacgttg gcgagattga tgccggtgca 4261 ttgaactttg acttggacgc catgccgacg ccacccaatg acaacaacaa cctggctgcc 4321 tggtacgata ccgattgtta gacaagccga gctaagggta agggtcgagt atccattcga 4381 ccccataaca taaaacacac gaattcccat ccctgcacaa tagccctctt ccaccggctt 4441 tgattccatc ccggatcccg gaatcgcgat caccgaaact tgactagatc aacgaaggtg 4501 tggattttac ttgacaaata cgaggagctg cggcaggtca aagttctgct tccagaactg 4561 aagtccgtgg gagaaggcta tttgctcaca caccataccc cgcgacaaag catacacaca 4621 cgcatacatg cataatatta aacatttatt ataatgcgaa cgaaacggca agaaaaacat 4681 attatatgat gcattacata ttacccacgt aaacgaaatg gaaaattaaa caaatgtttg 4741 caatagaact cgtacatttc ccttcatatg // LOCUS DMASCT3 1843 bp DNA INV 12-SEP-1993 DEFINITION Drosophila T3 gene of achaete-scute complex (AS-C). ACCESSION X12549 Y00846 NID g7624 KEYWORDS achaete-scute complex; neurogenesis. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1843) AUTHORS Cabrera,C.V. TITLE Direct Submission JOURNAL Submitted (09-AUG-1988) Cabrera C. V., MRC Laboratory of Molecular Biology, Hills Road, Cambridge CB2,2QJ UK REFERENCE 2 (bases 1 to 1843) AUTHORS Alonso,M.C. and Cabrera,C.V. TITLE The achaete-scute gene complex of Drosophila melanogaster comprises four homologous genes JOURNAL EMBO J. 7 (8), 2585-2591 (1988) MEDLINE 89052675 COMMENT Homology 1 and 2 in FT refers to homology to AS-C genes T8, T4 and T5 and to myc and MyoD1 genes. Homology 3 refers to T4, T5 and tyrosine targeting domain in 3. Data kindly reviewed (16-Jan-1989) by Cabrera C.V. FEATURES Location/Qualifiers source 1..1843 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone_lib="lambda Charon 4" /clone="lambda sc22." /chromosome="first chromosome band 1B1/2" /map="1-0.0" gene 1..1843 /note="lethal of scute" /gene="l(1)sc" /allele="" /db_xref="FlyBase:FBgn0002561" promoter 42..47 /gene="l(1)sc" /note="TATA box" /db_xref="FlyBase:FBgn0002561" precursor_RNA 277..1460 /gene="l(1)sc" /note="primary transcript" /db_xref="FlyBase:FBgn0002561" CDS 304..1077 /gene="l(1)sc" /note="T3 gene protein (AA 1-257)" /codon_start=1 /db_xref="FlyBase:FBgn0002561" /db_xref="PID:g7625" /db_xref="FLYBASE:FBgn0002561" /db_xref="SWISS-PROT:P09774" /translation="MTSICSSKFQQQHYQLTNSNIFLLQHQHHHQTQQHQLIAPKIPL GTSQLQNMQQSQQSNVGPMLSSQKKKFNYNNMPYGEQLPSVARRNARERNRVKQVNNG FVNLRQHLPQTVVNSLSNGGRGSSKKLSKVDTLRIAVEYIRGLQDMLDDGTASSTRHI YNSADESSNDGSSYNDYNDSLDSSQQFLTGATQSAQSRSYHSASPTPSYSGSEISGGG YIKQELQEQDLKFDSFDSFSDEQPDDEELLDYISSWQEQ" misc_feature 553..639 /gene="l(1)sc" /note="homology 1" /db_xref="FlyBase:FBgn0002561" misc_feature 679..741 /gene="l(1)sc" /note="homology 2" /db_xref="FlyBase:FBgn0002561" misc_feature 1030..1074 /gene="l(1)sc" /note="homology 3" /db_xref="FlyBase:FBgn0002561" misc_feature 1319..1324 /gene="l(1)sc" /note="polyA signal" /db_xref="FlyBase:FBgn0002561" BASE COUNT 575 a 420 c 360 g 488 t ORIGIN 1 ctgagtagga atagaggcac ccaccacaga aaaagaaccc ctagaaagag aggaaaaatg 61 tacgatcact tgtgcaaagg acttaggtcc cggtttttcg agggcaggta gccaggatcc 121 gaccccgtac caacccctgt agctcctctg ccgaagtcgc tgcctctgtc gcggcgcgtt 181 tccctctgcc actggccggg tatttaaagc cctagatcag aacagcaatt atcattgcgg 241 aatctgattc cacacagtca acatctgtaa actaaatctt agaaaactct cacaaggatt 301 accatgacga gcatttgcag cagcaaattc cagcagcagc attaccagct gaccaacagt 361 aacattttct tgctgcaaca tcagcatcac catcaaacgc agcagcacca gttgattgct 421 ccgaaaatac ctttgggtac cagccaactg cagaatatgc agcagagtca acagtccaat 481 gttggaccca tgttgtcctc ccagaagaag aagttcaact acaataacat gccctatggc 541 gagcaattgc catcggtagc cagacgaaat gcccgtgaac gcaatcgcgt gaagcaggtg 601 aacaatggat tcgtcaatct ccgccagcat ttgcctcaaa ctgtggtaaa ctcgctgtcc 661 aatggaggac gtggtagcag caagaagtta tccaaggtgg acacactgcg aatcgccgtt 721 gaatatattc gaggactaca ggacatgctt gatgatggca ctgcttcatc aactcgtcac 781 atctacaatt ccgccgatga aagtagcaac gatggcagca gctataacga ttacaacgat 841 agtttggaca gttcgcaaca gttcttgacg ggagccaccc agtctgccca atcccgctcg 901 taccactccg cctcgcccac gccgtcgtac tccggatccg agatttccgg aggtggctat 961 atcaaacagg aactacaaga gcaggacctc aaattcgact cctttgatag cttcagtgac 1021 gagcagccag atgacgagga gctactcgat tatatttcat cttggcaaga gcagtgaagg 1081 ggtcttacta aaagtcccaa acaaacaaat attgtacaaa ctgtaaatac cctaaattgt 1141 tgccttagtg agtgtaaaac caagtctcaa atttcacatt agcctctaag ttaccccata 1201 ttttttttta ttatatttta acgcaatgga agacaatgat agaaaaccac atattttttt 1261 catagttata agtttgttat aagcatggaa gacactaaac taactacttt taagccaaaa 1321 taaaaacata ttgataaatt taattccaaa tgttttttac tgaaatcact tactcgtaaa 1381 tatattcaga tcgtcatgta gggtaattac aacgagttct cgttctcata ccagcatcag 1441 agccaaaaag gtttttaaac aatctgcatt ttgaagcatt gctttgacta tatatatgtt 1501 atgatattcg tttttaattt atgtattttt atattattat tattattttt tagcttagct 1561 gttttggcct caggcttaat aatggtacta gcgatagaaa taataatttc acaaaaaagt 1621 tacccaattt attatttata ttcaattact tttggagcgt ggacatgact cactcaaaat 1681 tcgtaaccaa catagagtta agcacctgac aggaaacaac agcgaatatt ttcatgattg 1741 gttccctaac gagctacaat tcggccggga attgttaatg gcgcgtaaat agcccggaaa 1801 taggcagtca cgcctgagag gatgaaattg tcctagtcca agg // LOCUS DMASCT8 1600 bp DNA INV 12-SEP-1993 DEFINITION Drosophila T8 gene of achaete-scute complex (AS-C). ACCESSION X12550 Y00846 NID g7626 KEYWORDS achaete-scute complex; neurogenesis. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1600) AUTHORS Cabrera,C.V. TITLE Direct Submission JOURNAL Submitted (09-AUG-1988) Cabrera C. V., MRC LABORATORY OF MOLECULAR BIOLOGY, HILLS ROAD, CAMBRIDGE CB2,2QJ UK REFERENCE 2 (bases 1 to 1600) AUTHORS Alonso,M.C. and Cabrera,C.V. TITLE The achaete-scute gene complex of Drosophila melanogaster comprises four homologous genes JOURNAL EMBO J. 7 (8), 2585-2591 (1988) MEDLINE 89052675 COMMENT Homology 1 and 2 in FT refers to homology to AS-C genes T3, T4 and T5 and to myc and MyoD1 genes. Data kindly reviewed (16-Jan-1989) by Cabrera C.V. FEATURES Location/Qualifiers source 1..1600 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone_lib="lambda Charon 4" /clone="lambda sc53." /chromosome="first chromosome band 1B1/2" /map="1-0.0" gene 1..1600 /note="asense" /gene="ase" /allele="" /db_xref="FlyBase:FBgn0000137" CDS 154..1344 /gene="ase" /note="T8 gene protein (AA 1-396)" /codon_start=1 /db_xref="FlyBase:FBgn0000137" /db_xref="PID:g7627" /db_xref="FLYBASE:FBgn0000137" /db_xref="SWISS-PROT:P09775" /translation="MLGAVQSAAASTTNTTPISSQRKRPLGESQKQNRHNQQNQQLSK TSVPAKKCKTNKKLAVERPPKAGTISHPHKSQSDQSFGTPGRKGLPLPQAVARRNARE RNRVKQVNNGFALLREKIPEEVSEAFEAQGAGRGASKKLSKVETLRMAVEYIRSLEKL LGFDFPPLNSQGNSSGSGDDSFMFIKDEFDCLDEHFDDSLSNYEMDEQQTVQQTLSED MLNPPQASDLLPSLTTLNGLQYIRIPGTNTYQLLTTDLLGDLSHEQKLEETAASGQLS RSPVPQKVVRSPCSSPVSPVASTELLLQTQTCATPLQQQVIKQEYVSTNISSSSNAQT SPQQQQQVQNLGSSPILPAFYDQEPVSFYDNVVLPGFKKEFSDILQQDQPNNTTAGCF RTRA" misc_feature 433..519 /gene="ase" /note="homology 1" /db_xref="FlyBase:FBgn0000137" misc_feature 565..627 /gene="ase" /note="homology 2" /db_xref="FlyBase:FBgn0000137" BASE COUNT 487 a 395 c 363 g 355 t ORIGIN 1 ccccaaggaa aaccccaatc caggaataaa aaccacgttg aaaccttttg gaaagattac 61 cgttcacaat gttttaagtg agagtggcgc caacgcttgc aacagcatat agccaatcag 121 aacaccatta ttcgaaagat ccgggacttt ggcatgctgg gcgctgttca aagtgccgca 181 gccagcacaa ctaacaccac acccatatcc agtcaacgga agaggcccct gggagaatcc 241 caaaagcaga accggcacaa ccagcagaat caacagctta gtaaaacatc agtgcctgct 301 aaaaaatgca agaccaacaa gaagttggcg gttgaaaggc ccccaaaagc aggaactata 361 agccaccctc ataaaagcca aagcgatcag agttttggga ctcctggaag aaagggtttg 421 cctttgccac aagccgttgc ccgtagaaac gctagggaaa gaaatcgcgt gaagcaggtt 481 aacaatggat ttgctttact ccgggagaag atcccagaag aagtatctga ggcttttgag 541 gcccaggggg cgggtagagg agcaagcaag aagctatcca aagtggagac cctccgcatg 601 gccgtagagt acataagaag tttggaaaaa ctgctgggat ttgattttcc acctctcaac 661 agtcagggga atagttctgg ttccggcgat gatagcttta tgtttattaa ggacgaattc 721 gattgtctgg atgaacattt cgacgactcg ctgagcaact acgaaatgga tgagcaacag 781 actgtccaac aaactttatc cgaggatatg ctaaaccctc cgcaagccag tgatctcctg 841 cctagtttga ctacattaaa tgggttgcaa tacatcagaa taccaggaac caacacctac 901 caactgctga cgactgactt attgggcgat ttgagtcacg agcaaaaact tgaagaaaca 961 gctgcttcgg gccagttatc gcgatcgccc gtgccacaaa aggtggtaag aagtccctgc 1021 tcttctccag tttcacctgt cgcctcgact gaattgctgt tacagacaca gacgtgtgcc 1081 acaccgctgc aacagcaagt aatcaaacag gaatacgtca gtaccaacat tagcagcagc 1141 agcaacgcac agacttcccc gcagcagcag cagcaagttc agaacctggg atcgtcgcct 1201 attttacccg cgttctacga ccaggagccc gtgagcttct acgacaacgt agtccttccc 1261 ggattcaaga aggaattcag cgatattttg cagcaagatc agcccaacaa tacaaccgct 1321 ggctgctttc ggacgagagc atgatcgatg ccattgactg gtgggaggca catgcaccta 1381 aatctaatgt gcatgcacca atctgtccgt ttagccgaat tttttcacat cacgcatctc 1441 ggaaaagccg attgcatttt ttggcatact ttttaaatga ttttaaatcc tcacagcata 1501 agtctgtggc aggccattct atctaaattt tttttaatca agccatgact gagtcattgt 1561 gtaaatatca atttaagccg agaaaggagg ataacttcgc // LOCUS DMBARI1 1728 bp DNA INV 30-JUN-1993 DEFINITION D.melanogaster Bari-1 mobile element DNA. ACCESSION X67681 S55767 NID g7640 KEYWORDS mobile genetic element; transposon-like element. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1728) AUTHORS Caizzi,R. TITLE Direct Submission JOURNAL Submitted (22-JUL-1992) R. Caizzi, Nodo Nazionale Italiana, (Area di ricerca CNR-Bari), Via Amendola 165/a, 70126 Bari, ITALY REFERENCE 2 (bases 1 to 1728) AUTHORS Caizzi,R., Caggese,C. and Pimpinelli,S. TITLE Bari-1, a new transposon-like family in Drosophila melanogaster with a unique heterochromatic organization JOURNAL Genetics 133 (2), 335-345 (1993) MEDLINE 93170638 FEATURES Location/Qualifiers source 1..1728 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone="PR28" repeat_unit 1..28 /rpt_type=INVERTED gene 379..1398 /note="Bari1 element" /gene="Bari1" /allele="" /db_xref="FlyBase:FBgn0005773" CDS 379..1398 /gene="Bari1" /note="ORF" /codon_start=1 /db_xref="PID:g7641" /db_xref="FLYBASE:FBgn0005773" /translation="MPKTKELTVEARAGIVARFKAGTPAAKIAEIYQISRRTVYYLIK KFDTVGTLKNKKRSGRKPVLDQRQCRQILGVVAKNPSASPVKIALESKNTIGKQVSSS TIRRRLKEADFKTYVVRKTIEITPTNKTKRLRFALEYVKKPLDFWFNILWTDESAFQY QGSYSKHFMHLKNNQKHLAAQPTNRFGGGTVMFWGCLSYYGFGDLVPIEGTLNQNGYL LILNNHAFTSGNRLFPTTEWILQQDNAPCHKGRIPTKFLNDLNLAVLPWPPQSPDLNI IENVWAFIKNQRTIDKNRKREGAIIEIAEIWSKLTLEFAQTLVRSIPKRLQAVIDAKG GVTKY" repeat_unit 1701..1728 /rpt_type=INVERTED BASE COUNT 596 a 291 c 332 g 509 t ORIGIN 1 acagtcatgg tcaaaattat tttcacaaag tgcatttttg tgcatgggtc acaaacagtt 61 gcttgtgcag caagtggggg gaggtgaaat gcaaaaaaac ttttgctttt gcaaattcaa 121 acctatgcag agtcagatga aagaagaatt gaaaaaataa ctgttcctat gcgcaaggaa 181 gaggcaaatg aagagatctt tatcagttgt cagaagtatt tgcacacggt ttcgtcgcat 241 cacaattatt ttcacaacgc aatttcttct tcagtgattg gtttagagtg acaagtgccg 301 gtttgtttgc ttaaatacat ttaaattatt gaataaaaat tagatttaat cattttccta 361 ttacagttat taaataaaat gcccaaaaca aaagagttaa cagttgaggc ccgggctggt 421 attgttgcta ggtttaaagc cggtacacct gcggccaaaa tagctgaaat atatcaaatt 481 tcgcgtagaa ctgtctacta cttaataaaa aagtttgata cagttggcac attaaaaaat 541 aaaaaaagat caggccgaaa acctgtgctg gaccaaaggc aatgcaggca aatacttgga 601 gttgtggcga agaatcctag tgccagtccg gtaaaaattg ccttagaatc aaaaaataca 661 attggcaaac aagttagtag ttctacaatt cgtcgcaggc taaaagaagc tgattttaag 721 acatacgttg ttcgcaaaac gattgagatc acaccaacca acaaaacaaa acgtcttcga 781 tttgcgttgg aatatgttaa gaagcctctt gacttttggt ttaatatttt atggactgat 841 gagtctgcat ttcagtacca ggggtcatac agcaagcatt ttatgcattt gaaaaataat 901 caaaagcatt tggcagccca gccaaccaat agatttggtg ggggcacagt catgttttgg 961 ggatgtcttt cctattatgg attcggagac ttggtaccga tagaaggaac tttaaatcag 1021 aacggatacc ttcttatctt aaacaaccat gcttttacgt ctggaaatag actttttcca 1081 actactgaat ggattcttca gcaggacaat gctccatgcc ataagggtag gataccaaca 1141 aaatttttaa acgaccttaa tctggcggtt cttccgtggc ccccccaaag cccagacctt 1201 aatatcattg aaaacgtttg ggcttttatt aaaaaccaac gaactattga taaaaataga 1261 aaacgagagg gagccatcat tgaaatagcg gagatttggt ccaaattgac attagaattt 1321 gcacaaactt tggtaaggtc aataccaaaa agacttcaag cagttattga tgccaaaggt 1381 ggtgttacaa aatattagta ttgtatttat ataaaataaa gaaattctta tgttgaaatt 1441 agatgttaag ctgaaattta ctaaattaag ttgagtgaaa atacttttga agcgcaataa 1501 acatgtgaaa atactattga caacttgcat gcatattttc ttttgcttta agctttgtac 1561 tatgaaccgt tatctttcgt atttcttttc gactaccttc tgcatagatc aagctaagcg 1621 ataagaacta tttcaggcaa atcggacaac aacaagaaga aatataacaa aaagaagttg 1681 aagtttgcaa atattgtgcg ttgtgaaaat acttttgacc acctctgt // LOCUS DMBLPP 5416 bp DNA INV 22-NOV-1996 DEFINITION D.melanogaster (Oregon R) gene for blastopia polyprotein. ACCESSION Z27119 NID g415797 KEYWORDS blastopia polyprotein; micropia-like element. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 5416) AUTHORS Frommer,G., Schuh,R. and Jackle,H. TITLE Localized expression of a novel micropia-like element in the blastoderm of Drosophila melanogaster is dependent on the anterior morphogen bicoid JOURNAL Chromosoma 103 (2), 82-89 (1994) MEDLINE 94333069 REFERENCE 2 (bases 1 to 5416) AUTHORS Frommer,G.G. TITLE Direct Submission JOURNAL Submitted (09-NOV-1993) Gvtz G Frommer, Molekulare Entwicklungsbiologie, Max-Planck-Institut fur biophysikalische Chemie, Am Fassberg, Gvttingen, 37018, Germany FEATURES Location/Qualifiers source 1..5416 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" gene 1..5416 /note="micropia element" /gene="micropia" /allele="" /db_xref="FlyBase:FBgn0002745" LTR 370..647 /gene="micropia" /db_xref="FlyBase:FBgn0002745" misc_feature complement(370..5406) /gene="micropia" /note="transposon" /db_xref="FlyBase:FBgn0002745" CDS 1131..5132 /gene="micropia" /note="combined genomic(1-1838) and cDNA(1638-5417)" /codon_start=1 /db_xref="FlyBase:FBgn0002745" /product="blastopia polyprotein" /db_xref="PID:g415798" /db_xref="FLYBASE:FBgn0002745" /translation="MFTRTPPTNKKLNTDQIQAILENESEDESRKEKMNEEDQKLAPV GEAEAKKQNKDASAKVEEKFEQMMNTLTQSMLAKSKQEGQVIIAAEKFEKVVSDCDGK SIPIKKWFEIFEKNAEAYELSEKQKYVQARSKMIGSAELFLESECVSGYTELKELLIE EFSGSYNSAVIHKKLQDRKKKREETLHDYLLQMKKIAALGEVETVALITHIVNGLDIK KEYKGAMLRCKTLKELKQEFEIYESLNIVDKPNIQPKPKQITQGVKADHCFNCGSREH KRKDCTLPTKCFSCNQEGHISSKCPEKVNSMRIHVDSARTKPVIINGIIINCLVDTGS DVTIIKEAIFKKMKDVDLNRTATVLRGLGNASTQPIGCFRALIKTDQVEASHNVLVVH DSKFSCDGIVGHDFISKFRLICSAEGYTFLDLEADKKQAVEYSQMFNICEESSFTVAP QYREDVERMIERTYETPPKQIKQCPVELKIIPDGVIKPFRHGHTRLSEEEAIAVKKQV EEWVEQSIVRKSTSNVASRIVVVRKKDGTLRVCVDYRKLNTMVLMDCFPVPIMEEVLE KLQSAKWFTTMDLQNGFFHVAVEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRF VQFIFQELINSNIMQLYMDDIIVYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQ RRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPGYAQIA RPLTDLLKKDAIFNIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGA VLLQKFEGSFHPVCFWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTD CVAFKQTTKKADVPREVGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQACMMITSE LTARIKKSQQNDDSIRAILEILKDRLFQPYKLKGGLLYSMVNGNELLVVPALMEREVI QSAHEVGHLSLQKTMHSIQQQFFYFLIWEYKVKKLISNCIKCIIHSKKLGKQEGYLNC IDKGDAPLHTLHIDHLGPMDSSAKQYKYILATVDAFSKFVWLFPTKSTGQEEVVKRLT DWSNIFGFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLIL AIISKLSSDEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMYTRVEDRLLELL QEEVVCQFNEDRYEMRQLVKRNIEQAQKDYKRNYDKKRRAEYKYKAGDLVAIKRTQFV AGRKMASGYLGPYEVTGVKDNGRYDVKKAANVEGPNVTSTSCDNMKLWKYIAENADLL SSGSDDDDQEGRM" LTR 5126..5406 /gene="micropia" /db_xref="FlyBase:FBgn0002745" polyA_site 5377..5382 /gene="micropia" /db_xref="FlyBase:FBgn0002745" polyA_site 5390..5395 /gene="micropia" /db_xref="FlyBase:FBgn0002745" polyA_site 5415 /gene="micropia" /db_xref="FlyBase:FBgn0002745" BASE COUNT 1854 a 1013 c 1202 g 1347 t ORIGIN 1 aagaccacgc ttccaaaagg gggagtatgt cgcgtcacgc acgactccca ccaaagggcc 61 aaaaccgctt acgcacctta aattctcggt tgatcagtat ccatgcgcga tccattcatg 121 agagcgccca attcatataa atacataaga aagccttttt acgctcaaca tataaagaag 181 taaatgagtc tcggccaagg gtttgctaag cgtttgcaac ttacaattag atttaattat 241 ttcgctctac aaatgagacg tgaattttct tcgcttccac acgtgtaatt ttatttgaat 301 aaaaattata ttttgttctt aataaattac catatatata aatataaaat atataaaata 361 taaaatataa atgtaacatg agtaaggctg aaggctggca acaacccggt tggcagcgct 421 gttgagcagc aacatgattg tcggaaatcc aagttatcga caatcagtca tcgaaggacg 481 atcgcaggca gcagtagagg cgagtggaag tcagcgttgc agtcagtcga gttctcagca 541 gcagtcgttc ggtccacaaa ctaagaaata ctttatataa ttaccgcatt tagaattaaa 601 ctaataatta aattaataat aaacaataat aataaacaat cttacatggg ggctcgtcca 661 gtcctaaatc ggttatatga aggtgcagtt gtttaaagaa aaaagacatt gttgtgtgcg 721 tgggtatagt ctttaaaacg ttgtaaagtt gtggctatat ctattgcatt taaagttgga 781 aaaatcagtt gtacagattt tgtttgaaca caagtcggta aaagtcggga aagctgctag 841 agagaactga taaagttgaa attgtcgtgt gcgtggattt agtctttaaa gttgtaaagt 901 tatggctacg tctactgcat tgaaagttga aaaaatcgat tgaactcata cagactcaag 961 tcgttttgct gttgtggaat ttaaaacaat taaattgcaa aggtggtgaa attcgtttct 1021 aacgaaaatc aaaatttgtc ttttaaccgg tggcgccgtc tgcaaaatcg actaccgtcg 1081 cgccgttaga acattgtcgt tgtttgctgg tgttagtgcc ttgtcgcgga atgttcacac 1141 gtacaccacc tacaaataaa aaacttaaca ccgaccaaat acaagcaatt ctagagaacg 1201 aaagcgagga cgaaagcaga aaagaaaaaa tgaacgaaga agatcaaaag ttggcgcctg 1261 taggagaagc agaggcaaag aagcagaata aagacgctag tgctaaagtc gaagagaaat 1321 ttgaacaaat gatgaatact ctaacccaga gcatgttggc aaaatctaaa caagaggggc 1381 aagtaattat cgctgcagaa aaatttgaaa aagttgtaag tgactgtgat ggcaaatcaa 1441 ttcctattaa aaaatggttt gaaatttttg agaaaaatgc cgaggcatat gaactttcgg 1501 agaaacaaaa atatgttcaa gccagaagta agatgattgg atcagcagaa cttttcttag 1561 aatctgaatg tgtcagtgga tacactgaac tcaaagagtt actaattgaa gaattttcag 1621 gcagctataa tagcgccgtt attcacaaaa agttgcaaga caggaagaag aagagggagg 1681 aaactctaca cgactatttg ttacaaatga agaaaatagc agccttaggt gaagttgaaa 1741 cagttgcttt gataactcat atcgtaaacg gcctcgacat taaaaaggag tataagggtg 1801 ctatgctccg ttgtaaaact cttaaggaat taaagcaaga attcgaaatc tacgagagtc 1861 tgaatattgt tgacaagccg aatattcaac caaaaccaaa gcaaattaca caaggtgtaa 1921 aagcagatca ctgcttcaac tgtggttcga gggaacacaa acgaaaggat tgtacacttc 1981 ctaccaaatg tttcagctgt aatcaagagg gccatatctc aagcaagtgt ccggaaaaag 2041 taaacagcat gcgcattcac gttgatagtg cacgaacaaa gccagtaatc ataaatggga 2101 ttatcatcaa ctgtctggtg gacacaggat cagatgtgac cataattaaa gaagctatat 2161 tcaagaagat gaaagatgtt gatttaaacc gcactgcaac agtattgcga ggtttgggaa 2221 atgcctcaac acagccgatt ggatgcttca gagcattaat caagaccgac caggtggaag 2281 caagccacaa cgttttagtc gtccacgatt ctaaattcag ttgcgatgga atagtgggac 2341 acgattttat cagcaagttt cgtcttatct gtagtgcaga aggctatact tttcttgacc 2401 tggaagcaga taaaaaacaa gcggttgagt attcccaaat gtttaatatt tgtgaagaat 2461 cttcttttac agttgcacca caataccgag aagacgttga acgcatgata gagagaacat 2521 acgaaacacc acccaagcag ataaagcaat gtccagtcga actcaaaatt attcctgatg 2581 gcgtgattaa accctttcgc catggacaca cccgactatc tgaagaagaa gctatagctg 2641 taaagaagca ggtagaggaa tgggtcgagc agtcaatcgt ccgtaaatct acatcaaatg 2701 ttgccagtcg catagtcgtt gtcaggaaaa aggatggtac cctacgcgtt tgcgtggact 2761 atagaaaatt gaacaccatg gttctgatgg attgttttcc ggtacccata atggaggagg 2821 tgcttgaaaa actgcagagt gccaaatggt ttacaaccat ggacttacag aacggatttt 2881 ttcatgtggc cgtagaagaa gccagcaagc cgtacacagc atttgttacc cgagaaggct 2941 tattcgagtt taacaaagcg ccctttggtt ttaagaattc cccagcagcg tttatacggt 3001 tcgttcaatt tatttttcaa gaactaatca attccaatat aatgcagcta tatatggatg 3061 acataattgt atatgccgct accccagaag aatgcatgga aaagacggaa atggtactta 3121 agagagctgc agaatttggt ctaaaaataa aatggaagaa gtgcaacttt atgcagaggc 3181 gaattcattt cctgggacat attatcgaag gtggacaaat atgccctgga aaagagaaaa 3241 catcagcagt gaattccttt ggaacacctc agaatgtaaa agccgttcaa ggatttctgg 3301 gtctcacagg attcttcaga aaattcatac ctggatacgc ccaaattgcg agaccactga 3361 cggacctatt aaaaaaagat gccattttca acattggacc agtagagcag cagtcggtga 3421 ataagctgaa agagattctg gtaaacgaac cagtattgag gatctactca cgagaagcag 3481 aaaccgaact tcatacagat gcctctaagg acgggttagg agccgtttta ttgcagaagt 3541 tcgaaggcag ttttcaccca gtctgctttt ggagcagaaa aactacaaaa gccgaatcaa 3601 atcgtcatag ttattacctt gaagtaaaag ccgcatactt agctctgaaa aagttcagac 3661 actatttatt gggagtccct ttcaagctcg tcacggactg tgtcgcattt aaacagacaa 3721 caaaaaaagc agatgtccca agagaagttg gcccatggat tctctatatg caggatttta 3781 attttcaacc cgaacatcgt gcaggagaaa gaatgagaca cgttgatttt ttaagccgcc 3841 atccccaagc atgcatgatg ataacatccg agttgacagc acgtattaaa aagtcgcagc 3901 agaacgatga ttcaattaga gcaatcctgg aaattctaaa agatcgtcta ttccaaccct 3961 acaagctaaa aggtggcctg ttgtatagta tggtcaatgg caatgaacta ctggttgtcc 4021 ctgcactaat ggagagggag gtgattcaaa gcgcacatga agttggccat ttgtcgttgc 4081 aaaagacgat gcatagcata cagcagcaat ttttttattt cctcatttgg gaatacaagg 4141 taaaaaagct aatttctaac tgtataaaat gtatcatcca cagcaaaaag ttgggaaagc 4201 aggagggata tctaaattgc atagataaag gagacgcacc gttgcacaca ctacacatcg 4261 atcatttggg gccaatggat tcatcggcca aacagtataa atacattctg gcaacagtcg 4321 atgcgttttc aaagtttgtc tggttattcc caaccaaatc aaccggacag gaagaagtgg 4381 tcaagaggct gaccgactgg tcaaacattt ttggtttccc taagcgaatt gttagcgaca 4441 aaggaacggc ctttacgagt ggtgcgttcg aacaatttat gagcagccat aacgtggaac 4501 acgtctgcac aactactgga gtggccagag gcaacggcca gatagaacga gtaaatcgtt 4561 taattttggc aataatatca aagctgtctt cagacgaacc gtcgaagtgg tacaaatatg 4621 tgcctgaggt acaaaaggcg atcaactgtc acgtgcattc atcactgaag ctgtcaccat 4681 ttgaggtcat gtttggcacc aagatgtaca cccgagttga ggatcggtta ctggaactgc 4741 tccaagaaga agtggtctgt caattcaacg aggaccgcta tgagatgaga cagctggtaa 4801 aacgcaacat cgagcaggcg cagaaggact acaagcgcaa ttacgacaaa aagcgccgag 4861 ctgaatacaa atacaaagca ggtgatctgg ttgcaattaa aaggacccaa tttgtagctg 4921 gccgcaagat ggcaagcggg tatttaggtc catacgaagt cacaggggtc aaagacaatg 4981 gcagatatga cgttaaaaaa gcagcaaacg tcgaaggacc caatgtcaca tccaccagct 5041 gtgacaacat gaagttgtgg aagtacatag ccgaaaatgc agacctattg tcatccgggt 5101 cggatgatga tgatcaggag ggccgaatgt aacatggagt aaggctgaag gctggcaaca 5161 acccggttgg cagcgctgtt gagcagcaac atgattgtcg gaaatcgaag ttatcgacaa 5221 tcagtcatcg aaggaacgat cgcaaggcag cagtggagta ggagtggaag tcagcgttgc 5281 agtcagtcgt gttctcagca gcagttcgtt cggtcacaaa ctaagaatac tttatataat 5341 taccgcattt agaattaaac taataattaa attaataata aacaataata ataaacaatc 5401 ttacatttat gtacca // LOCUS DMBX189A 1806 bp DNA INV 13-OCT-1995 DEFINITION Drosophila distal BX-C region (bithorax complex) pH189 5' region;. ACCESSION X15065 NID g7670 KEYWORDS bithorax complex; homeobox; regulatory protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1806) AUTHORS DeLorenzi,M., Ali,N., Saari,G., Henry,C., Wilcox,M. and Bienz,M. TITLE Evidence that the Abdominal-B r element function is conferred by a trans-regulatory homeoprotein JOURNAL EMBO J. 7 (10), 3223-3231 (1988) MEDLINE 89030618 COMMENT see x15080 for pH189 3' adjacent cDNA; x15065 and x15080 seqs are given as a compiled seq in [1] pH189 is coding for a homeoprotein (confering r element function) Data kindly reviewed (01-Jun-1989) by Bienz M. FEATURES Location/Qualifiers source 1..1806 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="embryo" /chromosome="distal BX-C region pos.+189." CDS 828..1223 /note="ORF (non homeotic)" /codon_start=1 /db_xref="PID:g7671" /db_xref="FLYBASE:FBgn0000015" /translation="MYRPVRLAAVFCQQGHDTVAKGRLQNPRTTTLTQTKSKPSGKCP LKMADCLWGSFLRSGGKISNYVLARRRTEPFGQIAKYFQATESNRKLLARNLDTIETK KNYGNCFQTVLSKSQKGHVALSFSSSFMT" BASE COUNT 532 a 370 c 369 g 535 t ORIGIN 1 atagcgcgct taaaaaatga aaaacgtaat ttgcataaca gatttaatgg tttgaagctg 61 ggagtactct ctcctcctgc tgagtctcga agtgtgaagt gaaataaaaa atgttgaaat 121 atgttcaagt tctgcagatg agatagatac cgggaaatat taatgttctt tattcggcca 181 aagcaaagcg aatgcgttct gtcaatttaa attgtgaaat aatattttta aatagattac 241 ctgcagaaca acatttttgt ttccaagaag catgcaccag ttgacccaac tcagccgtat 301 ctttctggga attctaattt tcactgccag cgagcttggg attttaccaa cgacggttgc 361 gatgcgcttc aattgaagca tttacttggt ctgctggctt ttgttcgccg cacagaaggt 421 caagttttca ttagtcaaat tgcagattag cttgcaggcg aggaccaagc ccacgtccaa 481 gtccaagccc aggatcccaa gtgtacgagt tcgcactcgg aaatgaatgc gactggcagg 541 caaggagaat gagtgccaag ccctgtggcc agcaactgcg gaggccataa attgcgcctg 601 tcactgtctt aatgtcccac aactccacaa tcagcagcgc ccaatgcccg ggtccgaatt 661 cgagagtcct gagctaagtc cactggtcac acccattccc ttgtccttct gggtgtcctg 721 cggccgggag cgaaactaaa ggaaaaacaa cgataattta taagtcgtaa atgtttgccc 781 gcctcccttg aaatgcgaaa atgccgaaat ggtgcacaat ttcctaaatg tatcgcccag 841 tccgattagc agccgtcttt tgtcagcaag gacacgatac agtagccaaa ggacggctac 901 agaacccaag aaccaccaca ttgactcaga cgaaaagcaa accatcggga aaatgtccgc 961 tcaagatggc tgactgcctt tgggggagtt ttcttcgctc gggaggaaaa atatcaaatt 1021 atgtattagc aagaaggcgg acggagccat ttgggcagat tgctaaatat tttcaagcta 1081 ctgaatcgaa tcgtaaatta ttggctcgta atttggatac catcgaaacc aaaaagaatt 1141 atggaaattg ttttcaaact gttttgtcaa aatctcaaaa gggacacgta gccctctctt 1201 tctcctcatc ttttatgacg taaaacaaat tcttattaaa ccaaaataga ttgcatttga 1261 atttggaatt atttgaaaag actgtaattt caagtgaaaa atgaaacaag tttggcgttc 1321 tgattaaatg atgtttcgac tgaaactata tatatatttt ttttagattt cagttctagg 1381 aatttgtttt ttattaaact gttttcaatg attctatata acgtttcata attcctttca 1441 taattaatac gatcaacgaa actacttttc tcattgctaa cagcctaaca atgataagtt 1501 aaattgaaat acgtaaagtt acattatttc gttatgaaag atagctcaaa aactcaagtg 1561 atttacgatt tactatttta tttacaaaat ctcgtccatc cccggattag ttgagagttt 1621 tagtggccgt cgtggcttaa tttacctttg cgttcggtta ttgctcctga ggctgagctt 1681 tagtacctgg aaaggtgttc ggttttatcg attggatgtg tgtgtcaggt gttgttaccc 1741 acatcggggt gtcttctgca atttttcccc atttctattc cccacgaaag gccgccacgt 1801 cgaccg // LOCUS DMC137E7 11922 bp DNA INV 13-FEB-1998 DEFINITION Drosophila melanogaster cosmid 137E7. ACCESSION AL021108 NID g2894145 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 11922) AUTHORS Ferraz,C., Vidal,S., Brun,C., Bucheton,A. and Demaille,J.G. TITLE Sequencing the distal X chromosome of Drosophila melanogaster JOURNAL Unpublished REMARK Centre de Recherches de Biochimie Macromoleculaire du CNRS, 1919, route de Mende, BP 5051, 34033 MONTPELLIER Cedex, France. REFERENCE 2 (bases 1 to 11922) AUTHORS Benos,P. TITLE Direct Submission JOURNAL Submitted (12-FEB-1998) European Drosophila Genome Sequencing Consortium COMMENT On Feb 18, 1998 this sequence version replaced gi:2760061. Sequence submitted by Takis Benos, EMBL Outstation - The EBI, Hinxton, Cambridge, CB10 1SD, U.K. E-mail: benos@ebi.ac.uk on behalf of the European Drosophila Genome Sequencing Consortium. For further information see the European Drosophila Genome Sequencing Consortium's web site: http://edgp.ebi.ac.uk/. Coding sequences are predicted from computer analysis, using both gene and CDS prediction programs and matches to other sequences. These predictions and matches have been evaluated by the annotators and may have been refined by hand. The annotators have also used their judgement on what matches to represent in this record. A far more complete annotation record is available from FlyBase (http://flybase.bio.indiana.edu/) through the FlyBase Annotation Object linked by the db_xref qualifier in the Feature Table. IMPORTANT: This sequence is NOT necessarily the entire insert of cosmid 137E7. It may be shorter, since we are minimising the overlap between cosmids to 100 bases, by trimming them. The true left end of clone 137E7 is at position 8586 of clone 30B7 Cosmid=137E7; Contig ID=18; Length=11922; Status=Finished. FEATURES Location/Qualifiers source 1..11922 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone="137E7" variation 508 /note="variation with respect to cosmid 30B7" /replace="a" variation 590 /note="variation with respect to cosmid 30B7" /replace="t" variation 1100 /note="variation with respect to cosmid 30B7" /replace="t" variation 1830..1890 /note="variation with respect to cosmid 30B7" /replace="ttttttcttggtgtatcagaggatc" gene 4333..4524 /gene="EG:137E7.1" CDS 4333..4524 /gene="EG:137E7.1" /note="1-evidence=predicted by content; 1-method=genefinder;084; 1-method_score=12.36; 1-evidence_end; 2-evidence=predicted by match; 2-match_accession=AA540252; 2-match_description=LD19675.5prime LD Drosophila Embryo Drosophila melanogaster cDNA clone LD19675 5'.; 2-match_species=Drosophila melanogaster (fruit fly); 2-method=blastn;1.4.9; 2-method_score=1156; 2-evidence_end; the EST EMBL:AA540213 comes from the 5' UTR" /codon_start=1 /db_xref="PID:e1226232" /db_xref="PID:g2760070" /translation="MEQITNYFEHMDYVSFSVVALPCVVIAVYGFLQVASGLAKCKSK SRMPGVCFHLTNNQKRIAD" BASE COUNT 3384 a 2429 c 2431 g 3678 t ORIGIN 1 aagataagcg gggatccgat acccgcctcc ctttcgcaaa cgtgtttgca aacggatcgt 61 acacgaaagt cggggccgta tgccaagtgt acatatacat atgtatgtat gtacatacaa 121 atctgtctgc ggattacttc ctgtggcaga tgaacaaaga agctgcgagc agaggcgcga 181 ggcatgaaac gaagagtgcg acaggaagcg actgcgcgaa aacaattcac agttgttctt 241 gataattatt tttatggccc gagaccgtga gccacgattg ccacgcacac tgcgtgccgg 301 tgataatacg caatttattg attattggga gacaggtcgc ttgcaacagc ttgtaacagc 361 ttgcaacagc ttttaacagc ttgcaacagc gaaacgaagc caccttattc agatgagcaa 421 tgaagttcaa actgcctaat ggatgactaa gctctgtggc tctggcccat cgactttggc 481 cctaccccaa taatttccgc tgcaggctgt caagcgctcc caggggcggt gggtgttgtt 541 tgatgggggt gtgttccgta tgttccgcat gttccgtgag aagaaagctc cggttcaatc 601 acccacaaac acctgattct acaaagctac gcgcgccagt ggatgttgtt gcttatctgc 661 ggccagcgga aagttcaagc acctgtggca ggcagctgcc gccctgcccg ccacccgcgg 721 cgtccttgag tatgccgcat tgcaacagaa gttgagctct cactttcgct aagcggcatg 781 tgctatacat atatgcatac tcgtaccaca gggacgtcgc tcttgccgca aatcgcgcac 841 tctccttctc tgtgaccgat tagagtgcac acgctcggct gtttgccagc aaaaatatac 901 acaataacaa gtgaataaac aattgctata gccgcaatat cggttcgtta caccgataag 961 agctttgtgg gcattttttc gctttttgaa agttcaaagt ttcctttggc ggcgggcacg 1021 cacacgagaa acgtgttaaa ccttcgcttg atatcgcatg acttagttaa ataattgcat 1081 cgccattgat ttgagacggc aggtaaagtt gaatcgggcg ggcattatct ccagcagatt 1141 cctcagatga ttgacttgtt agccattcgt ttaaagcagc agcgtatatg gttaagcact 1201 ttagttatga aactttactc tatgttgcaa aaatttgttt atttgcaggt gagtaaaacc 1261 tccttataac gacgctacat aagcataagt caacgattta tcaggtatct ctgagtaagt 1321 gccatcatcc ttaaagatat tgcccacaca aggctggtga cttgaaatac tggcaataat 1381 ataacttaag cagatgtgtg gaaaaaggcc aaaaccactc caagattcat ttcgaaattg 1441 cgcattggtg gcgagtctgg aatttaaaac gagcgccata tatttgttaa tattcataac 1501 aatattaata tacaacttgt tgcgtttcga aaacaattag cccgaaatgc catttcgtat 1561 aaatttgggc ctggcaaata aattaaattg gttttgccga aaaaacgttt atttatcatt 1621 tatttcgaag tttaaaatta ccaaggaatt tgctatcaaa gtgggttctt ctgaatacgg 1681 atgaaaactt tgattcatag aaaacgaact gtttccggaa ctttttggtt tagctttgct 1741 gattattctt ttgaaaaatg gttggttaat tgaaagttat aagcaaacaa aacatcgagg 1801 tcttgattcg tattaagggt tagaaataac cctcagaaaa aaaaaacata gggggtttct 1861 ctagtgagcg gggaacaagg ttcaatggcc aaaccccaaa acacacaaac cagaaagcag 1921 taagcagaaa gcaataagcc aaaactcact cggccagatg ggtggcaaat ggaggcgaga 1981 cagacgacaa cagccgcaag ttcaatgttg tatgctatac ggcgtattag gggttgtgca 2041 aggcaggcgg caccccggag tcattaacat tggccgaagt tcggacaaca aatgattcgt 2101 tgaacccaag gaacagatcg aaagtgcggg ggaagggagg catgtacaga gttggccaag 2161 acaattgccc tttcctggag tgatgaaaca accccctgca attgcacctc gggatttcac 2221 atagtaattg gccaaggaca cgtgttttgt ttttcgaaca aagagtctga tattttattt 2281 agataggaaa tatcacaaag ggtgtggaaa tggcagaaat gcgataataa ataaccttct 2341 ttattaaagc tggcttagtt aaactccctt tcaagctccc ttggatgtac gaagccaaac 2401 tagtttccat tagatgtaat gacttctaat gtggtatagg cgctgtcagt caccgcgtac 2461 acttatccat caataattga agcgattccc gacgatgaca ttgataaact tttctggctg 2521 acgtggccca aagctaagcg ttactacatt aagggggcga tacgcatatt tgataggatc 2581 gcccaataca cgggggatca agcgttttcc taacaacgtc attggcaagt tctgacgcag 2641 tttgtggaaa gttcgtacac atgtgtctgg aagtaatagc ttgggccgac atggggcaaa 2701 ctggtgggcg ggtagtggag atacaatgag tgggttaggt taggtgcaga caacaagtag 2761 agtacgtgca gtagaggcgc agttcattcg tacgtgtgtt ttcggggcat tcgaactccg 2821 aaccccgcgc acttggaatc cacaatataa ttttatacac tttttgaacg gtgcaatagc 2881 aaggtatgct tagcatcaaa ttgcacttgt ttcatcatca tttttgcaaa cgaaaaattg 2941 tcattaaagt tatgtttgtt ctgaaaatat attcaattat tgcgggggaa ctcaaactaa 3001 aaatgctgca ggagattgag catcgtttac agccgaacat aagtggctca cgtgcttttt 3061 cagtcgcaca gtggaattaa tccgcttaac ccatgccttt tatttttggc tgaatactgt 3121 acttacccat aggctttaat atgaatatct ctgctgaaaa tgtatttaca ttggagaagt 3181 taaaatgtat tactattgga cttgatatat aaatagagag gaaagtttca tttttacacc 3241 cactgtgcga tcgcgaccgc gtgcttttct tgtgagagag aatgggagat tgctcccctt 3301 tctacacttg acaaaacatt atgtgtattg tcatgacttc aatagcgtca tatatagaaa 3361 tcaagtttta aaccaacagg gcgaatgagt aatattttcc agcatatata gaaaacatgt 3421 ttattttgaa tttaaaattg tcggaaatat tttatgatgc tttcagtttg gaatcacatt 3481 cattaaaata cttgagactg atactgtgtg agtgattcac gaactgaagt gcagtagaga 3541 gcgtgaaagt gagtagagag aatttcgctg tcttattgag cgaatttcga atgtctcccc 3601 aaaagacccg tttctttcgg tgtaagactt ttggcgctct cttctcgccg ctctcttttc 3661 gcagcgacgt cgacgtcgtt cgtttgaatt ccgtttcatt cattttcatt cgacgattcg 3721 ccgtcgccgc acacgcagag cattcgctgc gcgctccgcc gacaaaaaaa ccaaaaatta 3781 aatcaaactg ttttcccacg acgcgagttt tccgcggcgg ttcttggccg atttgacttt 3841 ttggattttc acccgtctaa ctgagctttt ccgttcaaga gttcgaggct ttcttgcgtt 3901 cctggccacc gatgcaaatc aattacgcca gatttgcagt gcaaaacaat ggcgttattt 3961 gtgcaacaac aattactaac acaacggcag caacaacagc aaaataagca agagagaaaa 4021 aaaccacaac aaaggcaaag gagcagacag cgcaggacat tcagttagtt ccccgaaagg 4081 atacggttca actgcttctg tgaaaaatat atccaaacaa attacaaaaa atacaaaaaa 4141 aaaaaaactc aaagagtgcc caaaatcatt cgaaccgaat taagaaatcg ctagagttgc 4201 acctgcgcaa aagaattgcc aacaaatcga tacccgaacc atattttctt tgctttttgt 4261 ttaagtgaac ttcgaaagtg tccgaaaata caaatttaaa atacaaatta atgttgaaca 4321 actaaaatca caatggagca aataacgaac tacttcgagc acatggatta cgtgtccttc 4381 agcgtggtgg cgctgccgtg cgtcgtcatc gccgtctacg gattcctgca ggtggccagt 4441 ggcctggcca agtgcaaaag taagtcccga atgccaggtg tatgtttcca cctgactaac 4501 aatcaaaagc ggatcgctga ctaagccaga tgccagtgac acgaaaataa ctcctggctt 4561 gcgggaaggg tcaccttagg cacttaagtc atcaagttga actgtgaacc gaattaaaga 4621 ggatactttg ggattcttga tacccagtat atacggaagt attgtattgc attgttttta 4681 atttgtcgac tgattgatcg gttaaagggc attgttcatc gcaggtgata ccaaattaat 4741 ttcgctatct ttacggttta tagctcgctg tcattgatca aattactgtg gacagtaaat 4801 ggcatttaaa cgttttatct agatgtggct gagaaacgga gtgactggca atggaaacgg 4861 ggaagcattg tgagccacat ttgccacaat tgtgtccaag cgaccgcaaa gattttccca 4921 cttcacggat caattagcct tgccgcaagt gaagtacact tctcgaaact ggaatctaga 4981 tttctagaac tcaacctaat ccactttcgg ctgagaaata gaacagcatt ggcatttcca 5041 aaaaagtctc ggctctcgca taatgtttaa tcatatttgc cttaaagtgt ttgagctaga 5101 aaccgaaaca gctgccggtc tttcccacac tccccaactg acgtacatat gtacatccga 5161 gaagccgcct ttcaaagctt cgccgctcga aatgtgttta tttatagccc aactatggga 5221 tcgttcggga actgggaacc gggaagtggg aagtgggagc cgggaaccta tggtactgcc 5281 tgacctaccc ctcgcagttg aggaggcgat aagaacttaa attgcaatta atcagagagt 5341 ttctggaggc aaaaaatgac ggggcggtgg gaactcgaaa gatatcgtcg ctctggactt 5401 gggacaagga agcaatcgaa atcaagtttt tgtgtcaatc ttgatatgat ttggcttcgg 5461 tctggtttcg gtttctttgt gcgaaaagag tgtgtttata aacccgatgt ttacataata 5521 atcccccagt ccccaagttc gcgagcaact ttcattcggc aaactaattt gcatggaacc 5581 gggtacgaaa atgactttag gttgcctact ttcttttcgg ttgagaaagg tccgccctct 5641 gtcatctgca aatcggagat gtatgtatat gtatgtacca cacatatacg ctatatgtat 5701 atgcatatac tacatacata catgtagtaa acattttccc cttactctgc ctgccgcctt 5761 cttttaattt catttgactt tttccccagc tattttcggg gcttcttgtg agtgtttatt 5821 tcgccttgct cttgttattg ccgcccgccc catctgcaaa ttgagttcat ttatttttac 5881 gtgtaggcag taaacgaatt tcaataaatt agctgagata cgaactgcaa cggggcaaat 5941 taatcagtgg cggaaagttg gctgaaatct cttgaatcat tggacaaata ctggcacgga 6001 tacttatatt atatatgttt acttcagaat gaatacttct tgaacgttaa tttgaatatg 6061 attgttttgc aactatcttt tttttcgaac tagcccaatt gagcaatctt aagtaccttt 6121 atttcaatat gagcttggcc acttctgctg gtagcaccaa gttcaagtgc gatgcctttt 6181 atctttttga ggaacttgag caataccccc actattcgct gtctttaagt gcttaaagac 6241 aattgttatt gcttttaatt taatagcttg cttggatttt tggagcatca gaccgaattt 6301 ctcgcgcaat ttgttcttat cagcgggcgt cgtaataatt tgctaaggtt tatgtgttta 6361 tgggtgtttt ttttttctca ccgcgctagt tgtttaattt gttttccttt tccctgtgca 6421 tgacattcca ttcacatttc catttggtat gcataatact ccgccgtacc taataacatt 6481 gtgtgttata tatttttcgc ggcttgaaaa tttgttgcag atctctggtc gagactctta 6541 aatcacgaaa tcccgccgcg gcgtcattta taattgttta tactatacat ttttaatgcc 6601 agatgtggtg atcgagagcc cgccgcgagt tcaaatcaat catttggcga ttaaagaccg 6661 cgataaggat agtttagtgg ctgaattatg tcttcctagc aattcagcgc tcgactagga 6721 atcagctaag atttagttga aactaaatac ccggtataat agtatcaact ttttctgagc 6781 aaatgcattt gtcacagtcc gctgttctca atcatgcttg aatccacatt ctaatacgct 6841 atcatagatc caaagtgaac caattcaaaa atccatttgg tcttttatct gcctctgaaa 6901 gtttgcatgc gaactgagcc tcctgtgtat atttcccata ggcgtgacag cagttaatct 6961 gcccaaattt gttatacaaa aaatttatgt ttattaatct attactagta aatggtgtca 7021 gatggtgtgc ggctgttatt tttaacacac acacacacac acgcacgttt gccacaccat 7081 ttgtacgaca gaattttgaa atttcgcctt tcggcagagt gtcatcatca tatgattttg 7141 attacgatta tgccactttg cataatgttt ttgaactctt gtgctaattt gtgtgctgga 7201 tcgagatcac gaatgcggca cgccgtctac gtgtgaaatg attgaaatcg aaatgattcg 7261 agttcaaggg tcgtgacata atagggtccg cacattcaca gccaaaagtg aaaagtcaaa 7321 gaaatttgct cttgtctttg cctctgcttt tgctttctga ttttgtttct gccattcgaa 7381 gaccggagaa gaccaagacg tgacataaga aaggtcgttc caaaagaccg agacccctgg 7441 agtcgctctt ccatttgcat ttacatttcc attcccattt ccagtttctt tttttttctg 7501 tccgatgatg gccaagtcca aagccatcga caaagcgaaa gttttcgcct ctccggtttt 7561 tttgtatttc attttttcgg tcgaacttct tatttaacag cttcgttttc actttggctt 7621 gttgtgctta gctgtttatt tttcttgccg gtttctttct cgtcggtttt tgctggctgt 7681 tttttttatc ttttctttgg atacgtgcga caatccaaaa atgagtggaa atgtttttca 7741 aaactgattt tgaaaccgct gactcaccca gacggcgact gaaattatga aatccccaac 7801 catcataatt catttgatta atgctcatac tagctgtcgt cgattttcca gattttcatt 7861 ttcaggtgcc ttaattagga gtgaacattt aatttatcgc gatatttata tctttccaaa 7921 gatctacaga aacagcaaag cgttggctcc gtgatctggc cgtgttgcaa gtcagatttc 7981 ctatttccta attacccgtg accgatccgc caaagaaaac accaaccact cggctagagc 8041 ctcctccgct gggtttcgtt gtcaggtgat ccaaaccaaa tggtacttag acgacattcg 8101 gacatttgtc aaggggcccg tcagtgggca caatcaatat tattgtcacc cccacggagt 8161 agcatttcaa attgaccgct gcattccggg ttgttaacac tttggtcaac gtagcgaagt 8221 taattgttag ctgtccgaat aaaagggaaa agccctaatt tttcctcttc tgctactact 8281 acgtttctgg tgtccaccag ctgcaatatt gtataaacac gaagggataa tagtttatta 8341 atccgatcat tgcttgcatc aaaagcaact caaatggcaa attgcgtaaa tttgatattc 8401 gagcataaac aaattgaaac actggcgcta aatcagcacg tttgctgtct atccccccgg 8461 gactacgctc ctgatttaca tataaacaca ttttatttat gtatttaaat gtgtatgaat 8521 ttatttggtg cgcggtgaga ggcgaacagc gatctcagca ttttatcaag aaatcgtatt 8581 tcaaagatat cgcacacaga actggccctc tgttgcctta cttttaaaga ttgatttacg 8641 caggaagtgt tgggtaactg aaatataatg gaaatattcc ctgatcgaat tgttggatga 8701 ttggattatc ggattatcgg atcgtagtat caaagccgtt ttctatgtgg atatacaata 8761 caataataaa tacatacatg cccaggcctg ttggtgtatc tagaacaatt tatagataaa 8821 atctattcaa ttgttgatct taatttagaa caacgagtgg gttgtgtgat gctgtgattt 8881 cctctctata aacgtagtgt tggatccatc accgccccat ctatttcccc gacttctgat 8941 cgcattccgg accagttttc ctaccaaatt tgcacacaaa ttttcaactt tcgccattcc 9001 gttgaagcta tatatttatt taccttcata catgtactta aagcctcgaa tgacaagcgt 9061 gtcgaaatcc aagaataaag cacggaaact gcaaaataca atatgaattg ctcatttgga 9121 cggggtgtga gttgcgattt tggcgcctgt gagctgtgcc attattgtta tgcaaacact 9181 agtataacta tgttattaaa tatatcgttt attatgttta ataatatata ttttcttagt 9241 caacgctata atgcagagta atagggaaac tacagacatt taccccaatt actacccact 9301 ttcccatcgg gccatttacc tctaccctct aacttgtttc ctcgattttc cgtcttcttg 9361 gccatttgat ttgtgggccg aggtggtttc actgccactg agtctacaaa agtcgatggt 9421 tcggccctat gtgctgtctg tatttaactg acttctcttt tttatgtgct cgtcggcgct 9481 atttacttat gttttttaca agtgcaattg aggttacttt ctatttaaaa tgaaataaat 9541 aagtacatgc atgcaaatgg agctttgggg ccagccaggc gatcattttg gtattcttcg 9601 tttctccatt tcgtcgtcga gaagtgttga ccaaaatatg tatcttttgg ccactggcaa 9661 gtcttttggc tcactggagg cattttggtt gtaccccgct gatcgattcc attgcgtgtt 9721 gttcttttca atattgccgt gtacatttca attgaaggca ttgatggaat caataacaaa 9781 caattgattt tcttaatttc ttgcaatgag agctgtgtgt gaaaagtact ttatggtcca 9841 cttttccgtg ggaaagtcga cctcactgtc atgatgagtt cgcaatgccg cttacttaac 9901 attttgccag tgttttttta tttcttgtct aatttccacc agttttgtgg gctgcctgca 9961 cagctggcga cgtgcatcaa aatcaaaatt tgccatcatt tctctagctg tcgtgccctt 10021 gttcactcaa gtgtttgtta gtattttggc tttgtattta ttcatttatt tgctgctgcc 10081 cctctttctc ggcagaagga tggtgtttac tgtttgtctt ttcgccgtat ctcgtctcga 10141 ttggcttgct ttggctctat atttcgtatt tcttgtatct tgtatcttat atttgcatga 10201 attggtcact gtgcgcccag ttgtattact tttattactt ggccgccttt gaaagaaata 10261 aatcatctag ttttgcggtg tttggtgtgg attggtggcc gtgcatttgg tgtgcgtgct 10321 taaaatagta atatcccccg aagagagcaa tcgcatcaat aacaataata cacatcgtac 10381 gtcagccgat tctataccat acaataataa taataataat aataataatt accataaata 10441 tttgcctctt cgcgtcgctc tttcttttga atgaaaatga atgaaggcga gaatctgtgt 10501 gttttcgccc ccaaaacaaa atgcgaaaac attttgtcaa aagtaatttt tcaacgagcg 10561 tccaaacaaa atgcaaactt atattattac tataattgtt gttgttaaaa aatcatatgt 10621 gcacagacaa ataattccgt ccggttgtgg attgcttcga gcacacctat ttcgttcata 10681 caaatactat aacttttctc tgtgcaagtt tcgtcatctc catcttgcat atttgtgtgt 10741 gccgcgaaac cacgaacaag aggaagaggc agccgtggac gtcgaaaaca attgcaaatt 10801 gtgataaacc agagaaaagg aaaaaatatg ggtcatcccg caatagaaag aaacccaagt 10861 gagctacttg ttctgcggtc tgttactcca atagaaactg ggaaaacgaa agggggaaaa 10921 caattaccag cttaggccag gcataacgcc caaatatttg gaaaaaattt tggaaaatgc 10981 gcgattaaaa attgactcca ttttgtcaga cattactctc ttaccattct ttttatgaat 11041 aatcgctcag atcaaaaact aatttctagc atttggaata tccgctgatt taattgcatt 11101 catcattcaa gtgcgtgcag acattcacat tcacatccac atcattcaca tctttttcga 11161 cccgcatata taattttaat aaagacagcg cttaatgaag atgatttgtt ttgacaagtg 11221 tcaggatttt ttggtccaca atattattac gatacttgga ttgtagttgc ctatgcgttg 11281 ttgttgttgt tgttgttctt cagttcagtt catttcgcgt tgtcaaaaaa gtgtcagaat 11341 cgcagaattg tgacagcaag cacgcggact ctcatcttaa atgaactcat ccctccaatt 11401 ttaatttcgg gaagctaagc accagcaaat aaataaatac gagtcttctg agaaaataaa 11461 tcgaaaaaaa ccgcatttgg ttgagcgaaa ttagttgatt tgtttgtggc gttcatgtat 11521 ttgagtaaac aacaaattcc atattgtcct caattaataa caatatttaa aatatgggtg 11581 cgcatttgaa ctaaatgaaa atacgctact tttcccaata gcagcgttaa agagactcct 11641 ttgttgataa ggctatcaat tccactttag attgtaaatt aatagtgcgg tcatcatgtt 11701 ttgaagaaag aaatcaaggg gaatcaaggt ataaatataa ggtggtttat gttacataaa 11761 ggaggaaatg agcagagacg tctcatacca tctccaaata ctctaaaacc atttaatttt 11821 atttaaaagt cgagacattg ataacaattt ggttctgtta ttccgttgct tcccaaaaag 11881 cggaaacagt ttttttcgcg aactttcttc cgttccggga aa // LOCUS DMCOLT 2140 bp DNA INV 19-MAR-1998 DEFINITION D.melanogaster colt gene. ACCESSION Y12495 NID g1944533 KEYWORDS colt gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2140) AUTHORS Hartenstein,K., Sinha,P., Mishra,A., Schenkel,H., Torok,I. and Mechler,B.M. TITLE The congested-like tracheae gene of Drosophila melanogaster encodes a member of the mitochondrial carrier family required for gas-filling of the tracheal system and expansion of the wings after eclosion JOURNAL Genetics 147 (4), 1755-1768 (1997) MEDLINE 98072492 REFERENCE 2 (bases 1 to 2140) AUTHORS Mechler,B.M. TITLE Direct Submission JOURNAL Submitted (10-APR-1997) B.M. Mechler, German Cancer Research Center, Developmental Genetics, Im Neuenheimer Feld 280, D-69120 Heidelberg, FRG FEATURES Location/Qualifiers source 1..2140 /organism="Drosophila melanogaster" /strain="Oregon-R" /db_xref="taxon:7227" /chromosome="2nd chr 23A" /dev_stage="ubiquitous" gene 543..1463 /gene="colt" CDS 543..1463 /gene="colt" /codon_start=1 /db_xref="PID:e312314" /db_xref="PID:g1944534" /db_xref="FLYBASE:FBgn0019830" /db_xref="SPTREMBL:O01396" /translation="MTTTENVSTERKANPVKSFLTGGFGGICNVLSGHPLDTIKVRLQ TMPRPAPGEQPLYRGTFDCAAKTIKNEGVRGLYKGMSAPLTGVAPIFAMCFTGYALGK RLQQRGEDAKLTYPQIFVAGSFSGLFSTLIMAPGERIKVLLQTQQGQGGERKYNGMID CAGKLYKEGGLRSVFKGSCATMLRDFAANGLYFLVYEALQDVAKSKSETGQISTASTI FAGGVAGMAYWILGMPADVLKSRLQSAPEGTYKHGIRSVFKDLIVKDGPLALYRGVTP IMLRAFPANAACFFGIELANKFFNIVAPNF" misc_feature 812 /gene="colt" /note="P-element insertion site" terminator 1461..1463 /gene="colt" polyA_site 1471..1476 BASE COUNT 505 a 554 c 568 g 513 t ORIGIN 1 cggcaaattt agggtattcg aatgctctca cacctgcgtc gctataatgt tatttattat 61 tttaaaaaaa catcaacaaa ttattacagg gaaatgcaaa agtatttagt gccatagatc 121 ggtttaatta attagggctg tagggccagt taaaaattca attcaaagga ggtgcagcta 181 ggtggacttt gaaccctgct gcaacatctg gaaatcataa agatcttcaa accagaaaaa 241 tagcactttt gatcgaaaga tcaagttgct ccgtggcaat atttttgtga tatcagtgca 301 gtccagtatc tttatctgga gaatcactgc atctgtggga acatcaacag cttgtgacgt 361 aatgttgccg cgctccttat cgctatagaa tgctcaagat tagttcgaaa ctatcggcta 421 ggtgcaaatt ccaataatcc acttgacttg ccagaaaaca gcaacactag ttccgaaatc 481 gagcagctgc cggccgttaa ggtgaaggtg aaggaggagc agagcaatag caacctgtag 541 ccatgaccac cacggagaac gtctccacgg agcgcaaagc gaatccagtg aagtccttcc 601 tgaccggcgg attcggtggg atctgcaatg tgctctctgg ccatccgctg gacaccatca 661 aggtgcgcct gcagaccatg ccgcgtccgg cgccgggtga gcagcccctg taccgcggca 721 ccttcgactg tgcggccaag acgatcaaaa atgagggcgt ccgcggtctg tacaagggca 781 tgtccgcacc gttgacgggc gttgctccga tctttgcgat gtgcttcacc ggctatgcgc 841 tgggcaagcg gctgcagcag cgcggcgagg acgccaagct gacctacccg caaatcttcg 901 tggccggctc cttctccggc ctgttctcca ccctgataat ggcacccggc gagcgcatca 961 aggtgctcct gcagacgcag cagggtcagg gtggcgagcg caagtacaac ggcatgatcg 1021 actgcgccgg caagctatac aaggagggtg gacttcgcag cgttttcaag ggcagctgcg 1081 ccacaatgct cagggatttc gccgccaacg ggctgtactt cctggtctac gaggcgctgc 1141 aggatgtggc caagtcgaag tcagagacgg gacaaatcag tactgcctca acgattttcg 1201 caggtggagt ggcgggcatg gcctactgga ttctgggcat gccagccgac gtgttaaaga 1261 gccgcctaca atcggctccc gaaggcacct acaagcacgg catacgcagt gtcttcaagg 1321 atctgattgt caaggatgga cctctggcct tgtaccgcgg cgtaacgccc atcatgctcc 1381 gagccttccc agccaacgct gcctgcttct tcggcattga gctggctaac aaattcttta 1441 acatcgtagc tccaaatttc tagtttgtct aataaagaaa gtgcctcgct aaaatgtttt 1501 tacaacttga agaaaactag ctatatttgt gtgcccaatt caaaacttta gagcttaact 1561 aaatctaaac gaagtactgc ggcttgcgca tacggtgaat gccgtggtcc gcgagagccg 1621 gcacccaggt cctccatggc gagcgagcgt gtacttcctg tccttggggt tcttcttgtc 1681 ccttgctgga actgtgtccg actggagtgc tgatgttcgt ggtcagctgg tcttgcagtg 1741 ctgcagtgac gtcgttggca atatccgaga tgaacttctg cgcggacacc gagacgaggc 1801 gcactatctt ggggtccact gtgcagaagc cagcctgcag atttaatgca tattagaaat 1861 gctacaaagc atagtttccg gaatatagct accgttttca agatgtgcat ggtgagggcg 1921 tctggtatgg tgggcgagta gtcctccagc tgctttatca gctcatccat ctccgattcc 1981 tccgtcgtca gaggaacctc ctcgacgtcc ggttgctccc tcgtcggaat gcagttcgga 2041 ctgcattagt ggtgagtcta tatcctcctc ctcggtgtcc gtggccgatg ttacggattc 2101 tgcgggtgta acactgatgt cctcgccatc ggaagccatt // LOCUS DMCSGS 1019 bp DNA INV 01-JUL-1992 DEFINITION D.melanogaster Cregon R Heidelberg Sgs-4 gene for salivary glue protein. ACCESSION X61944 NID g7765 KEYWORDS salivary glue protein; Sgs-4 gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1019) AUTHORS Furia,M. TITLE Direct Submission JOURNAL Submitted (24-JUL-1991) M. Furia, Dipartimento di Genetica, Biologia Generale e Moleculare, Universita di Napoli, Via Mezzocannone 8, 80134 Napoli, ITALY REFERENCE 2 (bases 1 to 1019) AUTHORS Furia,M., Digilio,F.A., Artiaco,D., Favia,G. and Polito,L.C. TITLE Molecular characterization of a Drosophila melanogaster variant strain defective in the Sgs-4 gene dosage compensation JOURNAL Biochim. Biophys. Acta 1130 (3), 314-316 (1992) MEDLINE 92223113 FEATURES Location/Qualifiers source 1..1019 /organism="Drosophila melanogaster" /strain="Cregon R Heidelberg" /db_xref="taxon:7227" /clone_lib="genomic" /clone="po1" /chromosome="X-3C11-12 politene bands" /map="3.0" gene 14..907 /note="Salivary gland secretion 4" /gene="Sgs4" /allele="" /db_xref="FlyBase:FBgn0003374" CDS 14..907 /gene="Sgs4" /codon_start=1 /product="salivary glue protein" /db_xref="PID:g7766" /db_xref="FLYBASE:FBgn0003374" /translation="MRLELLVVLLVGLAALAPSGSTCCKTEPPRCETEPPRCETEPPR CETEPPRCETEPPRCETTTPKCETTPPTCRTEPPTCKTEPPTCRTEPPTCKTKPPTCR TEPPTCRTEPPTCKTKPPTCKTEPPTCKTEPPTCRTEPPTCKTEPPTCRTEPPTCKTE PPTCKTEPPTCKTEPPCEKHCTKRIKRHRTKRTKRSKSTKKIVHHHNRPGTTPESGCG CGSKNESGGGGSGCILKDLLTPKCPDSKPKPQASPKCKSDPKPKAASKTTSKPKPKAC DSGKKNTTKKPRKTQPQKGGC" repeat_region 80..541 /rpt_type=TANDEM polyA_signal 941..946 BASE COUNT 362 a 293 c 202 g 162 t ORIGIN 1 ttccaaagtc aagatgcgct tggagttgtt ggttgtgtta ttggtggggc tggctgcact 61 tgccccgtca ggttctacat gctgtaaaac tgaaccaccg agatgcgaaa ccgaaccacc 121 gagatgcgaa accgaaccac caagatgcga aaccgaaccg ccaagatgcg aaaccgaacc 181 accaagatgc gaaaccacaa cacccaaatg cgaaaccacg ccacccacat gcagaactga 241 gccacccaca tgcaaaactg agccaccaac atgcagaact gagccaccca catgcaaaac 301 taagccaccc acatgcagaa ctgagccacc cacatgcaga actgagccac ccacatgcaa 361 aactaagcca cccacatgca aaactgagcc acccacatgc aaaactgagc caccaacatg 421 cagaactgag ccacccacat gcaaaactga gccaccaaca tgcagaactg agccacccac 481 atgcaaaact gagccaccca catgcaaaac tgagccaccc acatgcaaaa ctgagccacc 541 ctgtgaaaag cactgcacga aacgcatcaa gcgacaccgc acaaaaagaa ccaagcgatc 601 gaaatccacc aaaaagatag tacatcatca taaccgtcca ggaacgacac cagaatcggg 661 atgtggctgt ggatcgaaaa acgaatcggg cggtggagga agcggatgta ttttgaagga 721 cctgctaaca ccgaagtgcc ccgattccaa accgaagcct caagcttcac ccaagtgtaa 781 gtccgacccg aaaccgaaag ccgcatcgaa aaccacatct aagccaaagc caaaggcgtg 841 tgattcaggc aagaagaaca ccaccaagaa accgcggaag actcagccac aaaaaggtgg 901 ttgctaaaca gcaaacttgg ctcaaatgtc gttgaatatg aataaaatca cttttttttt 961 taatattata ttatttgaat atattattat tgatttcgct agaaatggaa tatgtcact // LOCUS DMCYCDC3 1645 bp DNA INV 12-SEP-1993 DEFINITION Drosophila melanogaster cytochrome c gene DC3. ACCESSION X01761 NID g7780 KEYWORDS cytochrome; cytochrome c. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1645) AUTHORS Limbach,K.J. and Wu,R. TITLE Characterization of two Drosophila melanogaster cytochrome c genes and their transcripts JOURNAL Nucleic Acids Res. 13 (2), 631-644 (1985) MEDLINE 85215502 COMMENT Data kindly reviewed (03-MAR-1986) by R. Wu. FEATURES Location/Qualifiers source 1..1645 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..1645 /note="Cytochrome C" /gene="Cyt-c1" /allele="" /db_xref="FlyBase:FBgn0000408" promoter 837..840 /gene="Cyt-c1" /note="put. TATA box" /db_xref="FlyBase:FBgn0000408" misc_feature 860 /gene="Cyt-c1" /note="pot. transcription start region" /db_xref="FlyBase:FBgn0000408" CDS 918..1235 /gene="Cyt-c1" /note="cytochrome C (DC3) (aa 1-104)" /codon_start=1 /db_xref="FlyBase:FBgn0000408" /db_xref="PID:g7781" /db_xref="FLYBASE:FBgn0000408" /db_xref="SWISS-PROT:P04657" /translation="MGSGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCG TAAGYKYTDANIKKGVTWTEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAFLK SNK" misc_feature 1524..1529 /gene="Cyt-c1" /note="put. polyadenylation signal" /db_xref="FlyBase:FBgn0000408" BASE COUNT 487 a 292 c 340 g 526 t ORIGIN 1 gtaatataaa tatataaata atatcattct ctgaaaaata tcaaatgcac tcttgtaaat 61 ttaaaacaaa tttaatttta agataattgg ttgagataaa catagttaat attttcaatt 121 gatcctttaa attttaaatt gcaggtgaat atcatccctg tgtgaccgtt gtatgcggca 181 tggttccatg tctctttccc gttattcatt tccctctgct ttgttttttt tttttttttt 241 ggttttgtta tgcggtggca tctgtttttg ccacaggaaa aatgttaaga gaggggaagg 301 cagggggcga aaacggagag tgcgtaaatt gcgttttaat tggaaggaaa tgttcaaagc 361 acatgtgcat ctgctagtca acgaattggt tgggaaaggg ggtggaaaag gggttgcaag 421 ccgaatgtgt ctgctaattg aattactttc ggttgctttt cccattagaa gtgccgccaa 481 gttctcgagc tgcttgtttg cttttcattt aatacccatt ttgatttaat tttcgttttt 541 cctatttttc tgacccaatt ttgttttgct ttcgtgcatt agcagctgtc tctgtctatc 601 gctgtgcagc caagagagtg accaagagaa acgctctctc tctctctctc agttgtccag 661 gacttgcact tttcaaacgg ttttttagga cactgaaaca aattgaatct gtttttcttt 721 tctatcaaat ttttagttct acacttttct ttttcttttc tttttttttt tttcggaatc 781 aaccaatttc tatttgatcc aaattaacaa aaaacaaata acaaaaaatt aaaaaatata 841 gaaataaaag ctgcataaaa agttgaattc taaatcataa atatcatttt tccctatttg 901 tctttcaggc ttccaagatg ggttctggtg atgcagagaa cggcaagaag atatttgtgc 961 agaagtgcgc ccagtgccac acctacgaag tggggggcaa acacaaggtg ggcccaaatc 1021 ttggcggggt cgtgggtcgc aagtgtggca cagcagcggg atacaagtat accgatgcca 1081 atataaagaa gggcgttacc tggacagagg ggaatttgga cgagtacctc aaggacccga 1141 agaaatacat tcccggaaca aagatggtgt tcgcaggtct taaaaaggct gaggagcggg 1201 ccgatttgat tgccttcctc aagtcaaaca agtagaatcg cctgcgaaac aacaagatcg 1261 gccaccatgc tatccagaaa actgcgctta aagactacaa acatattcaa aagatgacgt 1321 atttcacttg gatttcgaaa ctttgattgg gaatggtcga gctcaaatac atttcaaaaa 1381 ggtttacttt cactttagcc aattaaagtt gataaaccaa aaaccctctt cttaattcaa 1441 gttgtgtgcg acgcgggtgg aggaaagtgt tgtaccaatc agctttggtc acagttggtt 1501 ttatggtcct actagcaaaa tgtaataaat tggagaagct tgttaaataa tgcaaatttt 1561 ccagaggctt tccaatatag tccccttaat aggggaaaaa attacttata cgccgtgtgg 1621 tggataaata cgggtacaaa agctt // LOCUS DMCYCDC4 1559 bp DNA INV 12-SEP-1993 DEFINITION Drosophila melanogaster cytochrome c gene DC4. ACCESSION X01760 NID g7782 KEYWORDS cytochrome; cytochrome c. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1559) AUTHORS Limbach,K.J. and Wu,R. TITLE Characterization of two Drosophila melanogaster cytochrome c genes and their transcripts JOURNAL Nucleic Acids Res. 13 (2), 631-644 (1985) MEDLINE 85215502 COMMENT Data kindly reviewed (03-MAR-1986) by R. Wu. FEATURES Location/Qualifiers source 1..1559 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..1559 /note="Cytochrome C" /gene="Cyt-c2" /allele="" /db_xref="FlyBase:FBgn0000409" promoter 668..671 /gene="Cyt-c2" /note="put. TATA-box" /db_xref="FlyBase:FBgn0000409" misc_feature 701 /gene="Cyt-c2" /note="pot. transcription start region" /db_xref="FlyBase:FBgn0000409" CDS 768..1094 /gene="Cyt-c2" /note="cytochrome c (DC4) (aa 1-107)" /codon_start=1 /db_xref="FlyBase:FBgn0000409" /db_xref="PID:g7783" /db_xref="FLYBASE:FBgn0000409" /db_xref="SWISS-PROT:P00034" /translation="MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRK TGQAAGFAYTDANKAKGITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAY LKSATK" misc_feature 1284..1289 /gene="Cyt-c2" /note="put. polyadenylation signal" /db_xref="FlyBase:FBgn0000409" polyA_site 1309 /gene="Cyt-c2" /note="pot. polyadenylation site" /db_xref="FlyBase:FBgn0000409" BASE COUNT 534 a 292 c 298 g 435 t ORIGIN 1 tctgatgacg ttgcgacgcc ctccacgcgc gtattagtga gagcaaagta tgtgggttaa 61 aaagggggtg gccgcaaatg gaaatgcaga ctacgttaga taataatttc gggccttatc 121 agaaacaaca gccgactaat gcacttagca tgagcaattt taataattcc gtttccgcag 181 gagcttatca attgtttaca taacggggca aggggacaaa tattaattca cggtccataa 241 ctacctacat taacccatta tttcccaagc atggaaattt ttgatgatat aaagacgtta 301 ttattttaat accttaaaaa tatataatat tatataagta acgttgggaa atcaactggt 361 taataaattt taaatttcgg gtttatttat tcaataatct tttgataatg tatggctgaa 421 agtgaagctt ttatcagtat ctacacaatg gttcattgtg gctaataata aatggtatca 481 aatatcgtat aactattttt tgcagtgaaa ccagaatttc ggactaagta cataagcaaa 541 tgatataaaa tatatattgt aatcaattta tcagaataga acaaattaat tggtagcagt 601 tatgaacttt gaaccattta gtagccagtt ttttaagttt ttcaaaccta agatgtaaga 661 taacagatat attggttacc cttgttttat gaaccactca ttaataacaa acatttcttt 721 ttacagtcga gtccgtgtta acacattaat taaccacata atccataatg ggcgttcctg 781 ctggtgatgt tgagaaggga aagaagctgt tcgtgcagcg ctgcgcccag tgccacaccg 841 ttgaggctgg tggcaagcac aaggttggac ccaatctgca tggtctgatc ggtcgcaaga 901 ccggacaggc ggccggattc gcgtacacgg acgccaacaa ggccaagggc atcacctgga 961 acgaggacac cctgttcgag tacctggaga accccaagaa gtacatcccc ggcaccaaga 1021 tgatcttcgc cggtctgaag aagcccaacg agcgcggcga tctgatcgcc tacctgaagt 1081 cggcgaccaa gtaatggtgc tgtccatcaa cttacccaca acaactgcag gatgtcaaac 1141 tgtattattg tgttcagtca cagtccggca cgcaaatgca gcagcagcaa caactacaac 1201 tacaaatcaa catagtacag acctaaagaa ctacaattat gttaattata aagtttaaat 1261 aggacaattt attatttaat ttaaataaaa agtggaatat ttaattcaaa cccgatgaga 1321 attgtgacat ccacaaaaaa gttaaataat aaaaaaagaa ctaaaaaatg atataaaatc 1381 tgttttatgc gaggacctgg tttttgtagc tcgcaggtca aaaagaataa aaaaagcttc 1441 ttcagatttt tgactcgggc aactcaaatt aaaaataaga gataccaatc atatttataa 1501 aacaattgtc ctggcaattt ctatcaatag gtatctgtta gtcgtcaaac tcgactgcg // LOCUS DMDC0 3226 bp DNA INV 25-MAR-1993 DEFINITION Drosophila melanogaster DC0 gene for catalytic subunit of cAMP-dependent protein kinase. ACCESSION X16969 Y00220 NID g7806 KEYWORDS cAMP-dependent protein kinase; DC0 gene; protein kinase. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3226) AUTHORS Kalderon,D. TITLE Direct Submission JOURNAL Submitted (27-AUG-1989) Kalderon D., Dept. of Biology, Columbia University, Dept. of Biological Sciences, Fairchild Center, Columbia University, New York, NY 10027 REFERENCE 2 (bases 1 to 3226) AUTHORS Kalderon,D. and Rubin,G.M. TITLE Isolation and characterization of Drosophila cAMP-dependent protein kinase genes JOURNAL Genes Dev. 2 (12A), 1539-1556 (1988) MEDLINE 89107990 COMMENT **map; chromosomal location=30C; Data kindly reviewed (07-MAR-1990) by Kalderon D. FEATURES Location/Qualifiers source 1..3226 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone_lib="lambda Charon 4A" gene 1..3226 /note="cAMP-dependent protein kinase 1" /gene="Pka-C1" /allele="" /db_xref="FlyBase:FBgn0000273" exon 390..564 /gene="Pka-C1" /db_xref="FlyBase:FBgn0000273" /number=1 precursor_RNA 390..>3226 /gene="Pka-C1" /note="primary transcript" /db_xref="FlyBase:FBgn0000273" intron 565..1470 /gene="Pka-C1" /db_xref="FlyBase:FBgn0000273" /number=1 exon 1471..>3226 /gene="Pka-C1" /db_xref="FlyBase:FBgn0000273" /number=2 misc_feature 1512..1514 /gene="Pka-C1" /note="pot. ATG start codon" /db_xref="FlyBase:FBgn0000273" CDS 2124..3185 /gene="Pka-C1" /codon_start=1 /db_xref="FlyBase:FBgn0000273" /product="catalytic subunit" /db_xref="PID:g7807" /db_xref="FLYBASE:FBgn0000273" /db_xref="SWISS-PROT:P12370" /translation="MGNNATTSNKKVDAAETVKEFLEQAKEEFEDKWRRNPTNTAALD DFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQAIQ FPFLVSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYL HYLDLIYRDLKPENLLIDSQGYLKVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY NKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSDLKDLLRNLL QVDLTKRYGNLKAGVNDIKNQKWFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFDDYE EEALRISSTEKCAKEFAEF" BASE COUNT 944 a 774 c 780 g 728 t ORIGIN 1 gaattcccaa atagaatttt cataaaataa aaaaggaaat ccatttaaaa atatttcgta 61 aaatcgaatc taaacttact tcataataca acgtttcatt aaacaagtgc tctattttta 121 ttaaaaatta tatctttcat gcagcttaga actctttaaa cataacaata aaattaatcc 181 ttacagctta cgaattatct attattataa ttatttatta aaattttgga taaccgctag 241 ctatttccga tcatttagat tttcagacgg aatagaaccc gcgcagtagg gattactcat 301 gattgcgccg cagcggttca cgctgagcga gctgcctatc gctggcctac tcacacctgc 361 gtgctggggc gagtcgagtc gcgtcagtcg aaaaaaaaac tttgaacgat ttggtcggga 421 aaactcggtt cggcggctat gcgggtattt ttaatctaag ccatcaatcc acagctacag 481 tgcatcaaat cgatcggaaa gtcgaggcaa tatttctgaa agtgtttaca aatcgctggc 541 atcgtagtcg taaatttcaa aaaggtaatc gcgagcgaaa atggaaaagc aaagtcaaac 601 aaactcagaa aaaggaaatg aatgtaaaaa atcgattatt caatctgtgt atgtgtatgt 661 tggtgtgtgt gtgttaggtg agcgctgagt gtgtatgcgt gtacgatagt gtttgtttaa 721 accacgggat tttttatgcc caaatcgaat ggcgaaaatt tagcacaccg agcaatttaa 781 gtaatttaaa gtgtcgaaat gtggaaaagt gaaagtgtgc gaaatgtgga aaagtgcctg 841 cgaagagagc gctgaagaga gatcgcagaa gtaaaaccag aagcgcatac atatgcacat 901 caactcgcac acatacacac acgcacacca gtgaacgcaa agaagcaaaa agcaaaagga 961 aaatgaaaaa acagaagcca aagcaaaaac gtgccaaaaa aagtatttaa taattaaaat 1021 aggcgaaaat gagaggaatg cgcgaggaaa agaaagcaag cactgcgtaa cagtgcgtga 1081 gtgggagtga gctggcacta cggcatcagc tgtttgacac ttgacacgat cgaaagtcgc 1141 ctcctctcgc tctctttgcc attcctctgt tctcttcttt ttattatttt ctgaatttcg 1201 agtttgtgtg cgattttgtt aagcttattt attcagtgat tataaccagc tttttattaa 1261 gctccataaa agtgccagca aagcgctgag aacaaaaaca atatgaagtg aaaatgcgaa 1321 agagcgaaat acataagaaa cttaaaatat aatctatatg tgtgcataaa gaactcggaa 1381 aactggactc ttatttttag ccccttaccg aatatcccgc taatttgtgc cgttttctct 1441 cccgtctctc tttgcagctt ctcaaattag agtaaatcgc gatcataagc aaccttaaag 1501 tgtgaaacca aatgttagtc taagcctaaa gtgtataact agtttaagac ctcacaaatt 1561 aaagaaacca atacgtgcta aaaccataat ttaaacgcgt ctaaaccaag cgcctttaaa 1621 acgcaaccta aacaccaatt taaaaggata ttcagcgaat aagagagtga gagagctcca 1681 gtgagaagct ctctttggcc cattaggagc aactatttca tccgcaccgt tgacccgtaa 1741 ctcggcaaaa tagctaagtc cattttgcag ttcctcaaaa agaaaaagtc ccatcatagt 1801 tccacatccg gcgagggcaa gctacaggcg cagtccagtt gcgaggagga gggcggagcg 1861 gcagcgggag gagcgggagc ggcagcggga cctccagcgg accaggctag cagcagcagc 1921 agcggcccct cgtcagcagc cgccgcccac aagagcacgc cccctgccgc cacgaccacg 1981 cccggttcag gggcggattc aggaggagcc agcggaggaa caggaggagg gggaggagga 2041 cctagcactc cggcgacgat caggcccaag tgtcggccag cgcaaccttc cgtttgtcat 2101 cgctaacggg caccatctcc aagatgggca acaacgccac cacgtcgaat aagaaggtcg 2161 atgccgccga gacggtgaag gagttcctcg agcaggccaa ggaggagttc gaggacaagt 2221 ggcgacgcaa tccgaccaac accgccgccc tcgatgactt cgaacggatc aagaccctgg 2281 gcaccggctc ctttggccgt gtcatgatcg tccagcacaa gcccacgaaa gactattatg 2341 ccatgaagat cctcgacaag cagaaggtgg tcaagctgaa gcaggtggag cacacgctga 2401 acgagaagcg aatcctgcag gccattcagt tccccttcct cgtctcgctg cgctaccact 2461 tcaaggacaa ctccaacctt tacatggtgc tggagtatgt tcccggtggc gagatgttct 2521 cccacctgcg caaggtgggc cgcttctcgg agccgcactc gcgcttctac gcggcgcaaa 2581 tcgtgctggc cttcgagtac ctgcactact tggacctcat ctaccgtgat ctgaagccgg 2641 agaatctgct gattgactcg cagggctacc tcaaggtgac ggacttcggt tttgccaagc 2701 gcgtcaaggg ccgcacctgg acgctgtgcg gcacgcccga atacctggcc ccggagatta 2761 ttctgtccaa gggctataac aaggccgtcg actggtgggc gttgggcgta ctcgtctacg 2821 aaatggccgc cggctatccg ccgttctttg cggatcagcc gatccagatc tatgagaaga 2881 tcgtctccgg caaggtgcgc ttcccatcgc actttggctc cgatctgaag gacctactgc 2941 gcaacctgct gcaggtggat ctgaccaaac gctacggcaa tctgaaggcg ggcgtcaatg 3001 atattaagaa ccagaagtgg ttcgcctcca ccgactggat tgcgatcttc caaaagaaaa 3061 tcgaggcgcc gttcattccg cggtgtaagg gtcccggcga cacgagcaat ttcgatgact 3121 acgaggagga ggcgctgcgg atctccagca ccgagaagtg tgccaaggag tttgctgaat 3181 tctagaggag ctcttcgcca gtcagcccaa tcccctcgtt ctgcag // LOCUS DMDFD 3120 bp DNA INV 12-SEP-1993 DEFINITION Drosophila mRNA for Deformed (Dfd) protein. ACCESSION X05136 NID g7836 KEYWORDS Dfd gene; regulatory protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3120) AUTHORS Regulski,M., McGinnis,N., Chadwick,R. and Mcginnis,W. TITLE Developmental and molecular analysis of Deformed; a homeotic gene controlling Drosophila head development JOURNAL EMBO J. 6, 767-777 (1987) FEATURES Location/Qualifiers source 1..3120 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..3120 /note="Deformed" /gene="Dfd" /allele="" /db_xref="FlyBase:FBgn0000439" misc_feature 261 /gene="Dfd" /note="transcription start" /db_xref="FlyBase:FBgn0000439" CDS 751..2523 /gene="Dfd" /note="Dfd reading frame (AA 1-590)" /codon_start=1 /db_xref="FlyBase:FBgn0000439" /db_xref="PID:g7837" /db_xref="FLYBASE:FBgn0000439" /db_xref="SWISS-PROT:P07548" /translation="MSSFLMGYPHAPHHVQSPMSMGNGLDPKFPPVADDYHHYNGHYS MTASTGHMSGAVGGGAGVGSVGGGGAGGMTGHPHSMHPADMVSDYMAHHHNPHSHSHS HTHSLPHHHSNSAISGHHQASAGGYSSNYANATPPSHPHSHPHAHPHQSLGYYVHHAP EFISAGAVHSDPTNGYGPAANVPNTSNGGGGGGSGAVLGGGAVGGSANGYYGGYGGGY GTANGSVGSTHSQGHSPHSQMMDLPLQCSSTEPPTNTALGLQELGLKLEKRIEEAVPA GQQLQELGMRLRCDDMGSENDDMSEEDRLMLDRSPDELGSNDNDDDLGDSDSDEDLMA ETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQILELEKEFHYNRYLT RRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANGNPTPVAKK PTKRAASKKQQQAQQQQQSQQQQTQQTQQTPVMNECIRSDSLESIGDVSSSLGNPPYI PAAPETTSSYPGSQQHLSNNNNNGSGNNNNNNNNNNNSNLNNNNNNNQMGHTNLHGHL QQQQSDLMTNLQLHIKQDYDLTAL" misc_feature 1846..2028 /gene="Dfd" /note="homeo domain (AA 366-426)" /db_xref="FlyBase:FBgn0000439" misc_feature 2958..2963 /gene="Dfd" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0000439" misc_feature 2987..2992 /gene="Dfd" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0000439" BASE COUNT 959 a 758 c 746 g 657 t ORIGIN 1 ctctcagtcg cgcttgcgag agaactatgg tcagtggtgg aaaatgcgta cgaggcgaag 61 ggtgagaaaa ggtgaacaga catggctgct acatatgaat ggctttattt gtgcgcgtgt 121 gtgggccgtc cttcgattgc ttcggcagtg aaaacccgtt ttgatggcaa tggcggtgag 181 agagagcgag cgagagcaca agcaaacaag agcgaagagt ggcgaaacag gttcgctcgc 241 acggagagtt atcgccagcg agcataacaa aaaatcggct cgaatggaac ggttcgtgtt 301 cgcagcgcac tcgtaagacc gaaacgtccg acttttctcc ctgtgtggga ttgaaattcg 361 ttgtaaaacc gtttttttat aaccggaaaa taacaccata atcaagtttc tcagaattcc 421 aaggccccac ggcttttaaa agtgacaaaa aagtgcaaac aaagtataat caaaacaata 481 aaagtgaaaa ttatgaagac aacgggagcc ttctaacccc tttgtttagt taaaaatatt 541 aaaaagaata cgaaatttat tttaaccaac acaatcttaa aagtaattac tacttgcaaa 601 agcagcgcct ttaatcaata gttaatgtac taaaagcaaa aggttcggag tatgtgcaat 661 ccaagtgata gtgcccaaga aaaaatcgaa taacaaagta ataaccagga aaacgcatcc 721 ggtgaacccc gatccaacag atcttccgtc atgagctctt ttctcatggg ttatccgcat 781 gcaccacatc atgtccagag tcccatgtcc atgggcaatg gcttggaccc aaagtttccg 841 ccggtggccg atgactatca tcactacaat ggacactatt cgatgaccgc atctacgggt 901 catatgagtg gtgccgtcgg cggtggtgca ggtgttgggt ctgtcggagg tggtggagca 961 ggtgggatga ctggtcatcc gcattccatg cacccggcgg acatggtcag tgactatatg 1021 gcgcatcacc acaatccgca cagccactcc cattcgcaca cccactcact accgcaccac 1081 catagcaaca gtgcaatatc tggacaccac caggcatccg ccggcggtta cagttccaat 1141 tatgccaatg ccactccgcc ctcacatccg cactcgcatc cacacgccca tccgcaccag 1201 agcctcggct attacgtcca ccacgccccc gaattcatat ccgcaggagc ggtgcactcc 1261 gatcccacga acggatacgg accggcggca aacgttccaa atacgagcaa tggcggtggt 1321 ggcggaggaa gtggcgcagt gctcggaggt ggcgcagtgg gtggatcggc aaatggatat 1381 tacggcgggt acggtggggg ttatgggacg gcgaacggaa gtgtgggcag cacccactcc 1441 caaggacact cgccgcactc ccagatgatg gatctgcccc ttcagtgcag ctccacggaa 1501 ccaccgacga acacggcgct gggactgcag gaattaggcc taaaactaga aaaacgcata 1561 gaagaagctg tacctgccgg acaacaactg caagagctag ggatgcgatt gcggtgtgat 1621 gatatgggat ccgaaaacga cgatatgtca gaggaggatc ggctcatgct ggatcgatct 1681 ccagacgagc tgggctccaa cgacaacgac gacgacctcg gggactcaga cagcgatgag 1741 gatctgatgg cggagacgac cgatggcgaa cggatcatct acccctggat gaagaagatc 1801 catgtggcgg gagttgcaaa cgggtcttac cagccgggaa tggagccaaa acgccaacgc 1861 accgcctaca cacgccatca gatcctggaa ctggaaaagg agttccacta caaccgctac 1921 ctgacgcgtc ggcggcgcat cgagattgcc catacgttag ttctctcgga gcggcagatc 1981 aagatctggt tccagaacag gcgcatgaag tggaagaagg acaacaagct gcccaacacc 2041 aagaacgtgc gcaagaagac ggtggacgcc aacggcaacc caacaccggt agcgaagaaa 2101 cccaccaagc gggccgcctc caaaaagcag cagcaagcgc agcagcagca gcagtcgcag 2161 cagcagcaga cgcagcagac gcagcagact ccggtgatga atgagtgcat tcgttccgac 2221 agtttggaga gtatcggtga cgtcagctcg tccctgggca atccgcccta tataccggcg 2281 gcacctgaga cgaccagctc ttatccggga tctcagcagc acctcagcaa taacaacaac 2341 aatggcagcg gcaataacaa taacaacaac aacaacaaca acaacagcaa cctcaataac 2401 aataacaata acaatcaaat gggtcacacg aatctgcatg ggcaccttca acagcaacaa 2461 tccgatctca tgaccaatct tcagctacac atcaagcagg actacgatct gacggccctg 2521 tagaatcagc agggatatct tcaagatgac ttcagcattg taaattaaat acccctatca 2581 ttctatgtag attttagttt ttcattttga atcaatgacc ttgaacttca ggcaaggtta 2641 aagacaaatc ggagtataca gtgaacgtag ttagttaagg accgaccatt aggtagacga 2701 ctcccatttt ataatgttgt agtcccaatt ccccacaagt gttgtatatg agttttactt 2761 aagcacccta ggattcaggt ttaagagttt gtataaagcc tagaacgatt cgtcatagca 2821 aataagtggc ataaacttag cgttagaatg attatttgta taactatgat aactataaat 2881 attattaaag aatgtagttt gcatctgttg tgcgtctcta gatgtatgta agttcgtact 2941 tatattttat tgatacaaat aaaaccgcta acgagaagta tatcaaaata aagagaatat 3001 attgtatatg gaaacaaagt gaaaacaatt tttttaatat ggctaataat cattaaccca 3061 tttataaact aacactcgaa aaatattatt tcgcaatgag tcaaacaagc ccgaataata // LOCUS DMDFR2 3315 bp DNA INV 15-NOV-1993 DEFINITION D.melanogaster DFR2 gene for FGF-receptor homologue. ACCESSION X74031 S63797 NID g397600 KEYWORDS DFR2 gene; FGF receptor homologue; fibroblast growth factor. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3315) AUTHORS Shishido,E., Higashijima,S., Emori,Y. and Saigo,K. TITLE Two FGF-receptor homologues of Drosophila: one is expressed in mesodermal primordium in early embryos JOURNAL Development 117 (2), 751-761 (1993) MEDLINE 93321617 REFERENCE 2 (bases 1 to 3315) AUTHORS Saigo,K. TITLE Direct Submission JOURNAL Submitted (28-OCT-1992) Kaoru Saigo, Dept. of Biochemistry and Biophysics, Faculty of Science, University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113, Japan FEATURES Location/Qualifiers source 1..3315 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /clone="gFR21" /clone_lib="genomic DNA in lamda EMBL3" gene 127..3285 /note="breathless" /gene="btl" /allele="" /db_xref="FlyBase:FBgn0005592" CDS 127..3285 /gene="btl" /codon_start=1 /product="DFR2 protein" /db_xref="PID:g397601" /db_xref="FLYBASE:FBgn0005592" /db_xref="SWISS-PROT:Q09147" /translation="MAKVPITLVMIIAIVSAAADLGCDYGHHRCYIDVTVENSPRQRH LLSDMDITLQCVRPMAKWFYEDKFQLRATLLRLERAQSGNSGNYGCLDSQNRWYNISL VIGHKEPVGNDIASFVKLEDAPAIPESDLFFQPLNESRSLKLLQPLPKTVQRTAGGLF QLNCSPMDPDAKGVNISWLHIDTQILGGRGRIKLKRWSLTVGQLQPEDAGSYHCELCV EQDCQRSNPTQLEVISRKHTVPMLKPGYPRNTSIALGDNVSIECLLEDSALEPKITWL HKGNADNIDDLLQRLREQSQLPVDVTRLITRMDEPQVLRLGNVLMEDGGWYICIAENQ VGRTVAASYVDLYSPSDTTTVRTTTTTTVASPIPTASTGEDNDDDVENPAADASGGVG PPVFRKELKRLQHSLSGNTVNLACPVYGKANITWTKDKKPLNRELGVYVQKNWTLRFV EATSEDSGLYNCKVCNAWGCIQFDFSVQINDRTRSAPIIVVPQNQTVKVNGSLVMKCT VYSDLHPTVSWKRVVLKNASLDGLQSVEIQNLNFTVTNDSVVLTLRNVTFDQEGWYSC LASSGLGRSNSSVYLRVVSPLPPLEIYALLHAHPLGFTLAAITIVALFLLGSAFITFM LRRLRREKLLKLRIETVHQWTKKVIIYRPGGEEGSGCSSGDLQMPVIRIEKQRTTVST TGTGGTDPAQGFNEYEFPLDSNWEIPRQQLSLGSILGEGAFGRVVMAEAEGLPRSPQL AETIVAVKMVKEEHTDTDMASLVREMEVMKMIGKHINIINLLGCCSQGGPLWVIVEYA PHGNLKDFLKQNRPGAPQRRSDSDGYLDDKPLISTQHLGEKELTKFPFQIARGMEYLA SRRCIHRDLAARNVLVSDGYVMKIADFGLARDIQDTEYYRKNTNGRLPIKWMAPESLQ EKKYDSQSDVWSYGVLLWEIMTYGDQPYPHILSAEELYSYLITGQRMEKPAKCSLNIY VVMRQCWHFESCARPTFAELVESFDGILQQASSNPNDAYLDLSMPMLETPPSSGDEDD GSDTETFRETSPLRYQYTYKFN" BASE COUNT 846 a 829 c 901 g 739 t ORIGIN 1 tcgattgaag atacccacag gaattgatat tatttcgacc gcaactgtaa cccatatgta 61 cacgatcgtg cccatccaga tacgagatct tggtggctgt tgaactcaag agaatccact 121 tgaatcatgg caaaagtgcc gatcacgctg gtgatgatca ttgcgatcgt ctctgccgct 181 gcggacctgg gatgcgatta tggccatcat cgttgctaca tcgatgtgac tgtggaaaac 241 agtccccgcc agcgccatct gctctccgac atggacatca cgctgcagtg cgtccgaccc 301 atggccaaat ggttctatga ggataagttt caactgaggg ctacccttct gcgacttgaa 361 cgagcacagt ccggaaattc tggaaactac ggctgcctgg atagtcagaa cagatggtac 421 aatatttccc tggttattgg ccataaggaa ccggttggca atgatatcgc cagctttgtc 481 aagttggaag atgcaccggc catcccggag tcagatctct ttttccagcc cctgaatgag 541 agtcgatcct tgaagttgct gcaaccccta cccaaaaccg tacaacggac cgcaggtggc 601 ctttttcagt tgaactgcag tcccatggat ccggatgcaa agggtgttaa tatatcctgg 661 ctgcacattg atactcaaat ccttggtgga cgtggacgca ttaagcttaa aaggtggtca 721 ttaacagtgg ggcaactgca gccggaggat gctggaagct atcactgtga gctgtgcgtc 781 gaacaggact gccaaaggag taatccgacc caattggagg tgataagcag aaagcacacg 841 gtgcccatgc taaaacccgg atatccccgc aataccagca ttgccctcgg ggacaatgtg 901 agcattgaat gcctacttga ggactctgcc ctggagccga agatcacgtg gctacataag 961 gggaatgcgg acaacatcga tgacctcttg cagcgtttaa gagagcagtc tcagctaccg 1021 gtggatgtta cccgattgat tacccgaatg gatgaaccgc aggtacttcg tcttggaaat 1081 gtcctgatgg aggatggcgg atggtacata tgcatagccg agaaccaggt tggacgcact 1141 gtggccgcct cctatgtgga tctttacagt ccttcggaca ctaccacagt tcgcacgacc 1201 actactacca ccgtggccag cccaataccc actgcatcca ccggagagga caacgatgac 1261 gacgtggaaa atccagcagc ggacgcatca ggcggcgttg gtccacctgt gttcagaaaa 1321 gagctgaaac gattgcagca ctcattatcg ggaaatactg tcaatctagc ctgtccagtg 1381 tacggcaaag cgaacatcac ctggacgaag gacaagaagc cgctaaaccg tgaactcggc 1441 gtctatgtgc aaaagaactg gacactccgc ttcgtggagg ccaccagcga ggattctgga 1501 ctatacaact gtaaggtgtg caatgcgtgg ggctgcatcc agtttgactt cagtgtccaa 1561 ataaacgatc gcacgagatc cgcaccaata atcgtggtgc cgcaaaatca gacggtgaaa 1621 gtcaatggca gcttggtgat gaagtgcacc gtctactctg atctgcatcc tacagtcagc 1681 tggaaaaggg ttgtcctcaa gaatgcctca ttggacggcc ttcagtctgt ggaaatccag 1741 aatctcaact tcaccgtgac gaatgactcc gtagttttaa cgcttcgaaa tgtgaccttt 1801 gaccaggagg gctggtacag ctgtttggcc tcaagtggtc tgggaaggag taactccagt 1861 gtgtacctta gggtagtgag tcctctgcca cctttggaga tctacgccct gctgcacgcc 1921 catcctctcg gattcacctt ggccgctatt acgatagtgg ctttgttcct tttgggcagt 1981 gctttcataa cgttcatgct gcgtcggctg aggagggaga agctcctgaa actccgcatc 2041 gaaacggttc atcagtggac taaaaaggtg atcatatacc gaccgggtgg ggaagaagga 2101 agtggctgca gctccggcga tcttcagatg ccagtgataa ggatcgagaa gcagagaaca 2161 accgtttcca caacgggaac tggcggtact gatcccgccc agggctttaa tgagtatgag 2221 ttcccgctgg actcaaactg ggagattccc aggcagcagc ttagcttggg ctccattttg 2281 ggtgagggcg cctttggacg cgtagtgatg gcggaagcgg agggtctccc taggagtcca 2341 caactggccg aaaccatcgt ggccgtcaag atggtcaagg aggagcacac ggatacggac 2401 atggccagct tggtgcgtga aatggaggtg atgaaaatga ttggcaagca cataaacatc 2461 atcaatctgc taggctgctg cagccagggc ggtcctctgt gggtgatcgt ggagtatgct 2521 ccacacggaa acctcaagga cttcctcaag cagaatcgac ctggtgctcc acagcgacgg 2581 agtgacagtg atgggtatct agatgacaag ccactgattt ccactcaaca tcttggcgaa 2641 aaggagctca ccaagtttcc atttcaaatc gctcgaggaa tggagtacct tgcttcaaga 2701 cggtgcattc atcgcgatct ggctgcccgt aatgtccttg taagcgatgg atacgttatg 2761 aagatcgccg actttggtct ggcgagggat atccaagata cggagtacta ccgaaaaaat 2821 accaatggac ggttgcccat taagtggatg gcgcccgagt cgctgcagga gaagaagtac 2881 gactcacaga gcgacgtctg gagctatggt gttctgctgt gggagatcat gacctacggg 2941 gatcaaccat acccgcacat actgtctgcc gaggagctct acagctacct gattacgggt 3001 cagcgcatgg agaaaccggc caagtgctcc ctgaacattt acgtggtaat gcgacagtgc 3061 tggcactttg agtcctgtgc acgacccacg ttcgcggagc tggtagagag tttcgatggg 3121 atcctgcagc aggctagtag caatccaaac gatgcctatc tggacctttc gatgccgatg 3181 ctggagacgc cgccctcatc gggggatgag gatgatggct ccgacaccga aacattccgg 3241 gaaacgtccc cgcttagata tcagtacacc tataagttta attagttcgt agtataagga 3301 gaccaaaaag aattc // LOCUS DMDISCO 3043 bp DNA INV 30-SEP-1993 DEFINITION D.melanogaster disconnected (disco) gene for protein causing defects in neuronal connectivity. ACCESSION X56232 NID g7849 KEYWORDS disco gene; disconnected gene; neuronal connectivity. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3043) AUTHORS Heilig,J.S. TITLE Direct Submission JOURNAL Submitted (06-DEC-1990) Heilig J.S., HHMI, University of California Berkeley, Dept of Mol & Cell Biology, Box 539 Life Sciences Addition, Berkeley Ca 94720 USA REFERENCE 2 (bases 1 to 3043) AUTHORS Heilig,J.S., Freeman,M., Laverty,T., Lee,K.J., Campos,A.R., Rubin,G.M. and Steller,H. TITLE Isolation and characterization of the disconnected gene of Drosophila melanogaster JOURNAL EMBO J. 10 (4), 809-815 (1991) MEDLINE 91184126 COMMENT also sequenced on cDNA (embryonic developmental stage). FEATURES Location/Qualifiers source 1..3043 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="adult" /clone_lib="EMBL 3" /chromosome="14B3-4" mRNA join(45..455,456..3043) /gene="disco" /note="causes defects in neuronal connectivity" /db_xref="FlyBase:FBgn0000459" /evidence=experimental exon 45..455 /gene="disco" /db_xref="FlyBase:FBgn0000459" /number=1 /evidence=experimental gene 45..3043 /note="disconnected" /gene="disco" /allele="" /db_xref="FlyBase:FBgn0000459" prim_transcript 45..3043 /gene="disco" misc_feature 89..118 /gene="disco" /note="zinc finger-like domain" /db_xref="FlyBase:FBgn0000459" misc_feature 117..148 /gene="disco" /note="aberrant zinc finger domain" /db_xref="FlyBase:FBgn0000459" exon 456..3043 /gene="disco" /db_xref="FlyBase:FBgn0000459" /number=2 /evidence=experimental CDS 523..2229 /gene="disco" /note="causes defects in neuronal connectivity" /codon_start=1 /db_xref="PID:g7850" /db_xref="FLYBASE:FBgn0000459" /db_xref="SWISS-PROT:P23792" /translation="MEHIMNPFMSPAYLLGHGPHSHQHVHSHLPSHPQPNAASPASSP GGSSGSGSGSAAGSGTGSGSSLKPRRWGSPPINLAGQFINPATGKKRVQCSICFKTFC DKGALKIHFSAVHLREMHKCTVEGCNMVFSSRRSRNRHSANPNPKLHSPHIRRKISPH DGRTAQQFPVFSPGTAAAAAAVAGRLPVAFPGLLPPPPPHHGHHPYVMFGGQAGLHGL GLLSTGCQDPDSGSVDNEQDADPEDDNDFVYVDMQANSSSPAASSEDQEEHERDNEQD EEMHCSLSLASSSSIAADEERAADQPLDFSLHKRRKSEQDREQEQEQEQEREREAEKE QEQDVESDKEHEPEQEHELEREKRSPSDAFSMDQLLGKRKRHDSTASSSACSTAAASS ASSSSASASANPPQTSIKMELDPDSDSAYMTSRRQMLPLPVLDLEEHHHLRLLQTQMF AAAAAAAATSQAPPTAFLPAGSPVDLAKDSPPMWSLLSEMYRSMLLKTQHQQYNHHHQ LQQQHQQEQHHHLTLSHHHQEQHHHLGHHHMGHHHHHHHQHHQQQPQQQSPAATNAPI SV" BASE COUNT 824 a 862 c 705 g 652 t ORIGIN 1 tccctgctct ccgcacatcc gcatcttcgt cgctacttcg tttgccactc cgcatattca 61 catattcgca tccgcatatt cgcgtccagt ccactcttct ctctgccgcg cgacccagtg 121 cataagtgtg cgtgcatacg agcgtgtgtg tgtgtgtgtg tgtgtcatcg tcaactgtga 181 acgaccaact tttttaatat ctcagcaaaa tgcaacaaaa ataaatgcac cacgggcatg 241 aaaacaacaa cagcacacag ctccaacagt gaattctacc atctgaattt atcaactttt 301 tacgcaacaa aatatcaaaa caaaacaaag cgaaagaaac ccttttttta aatctcaaac 361 ctgtgacaaa gtgagaaaat ctaaaacaaa aaaaaaaaac agcaataaac caaaatacaa 421 taaaatatct acaactcgct gctaaattag caaaaggcac caccagtcat cgccatcgcc 481 atcgccagcg cgaccataga aacaaaaccc accacagacg acatggagca cataatgaat 541 ccgttcatgt caccggctta tctgctgggc catggcccac attcccacca gcatgtgcac 601 tcccatctac cgtcacaccc gcagccaaat gccgcctctc cggccagctc acccggcgga 661 tccagtggct ctggatcggg atcggcagcg ggatcgggca ctggatcagg ttcatcctta 721 aagcctcgtc gctggggctc accgcccatc aatctggccg gtcagttcat caatccagcc 781 acgggaaaga aacgagtaca gtgctccatt tgcttcaaga ccttctgcga caagggcgcc 841 cttaagattc acttttcggc cgtgcatctt cgcgagatgc acaagtgcac ggtggagggc 901 tgcaatatgg tgttcagttc gaggcgttcg aggaatcgcc atagcgccaa tccgaatccc 961 aaactccatt cgccacacat ccggcgcaag atctcgccgc acgatggccg cactgcccag 1021 cagtttccgg ttttctcgcc cggaacagcc gcagcagcgg ccgctgtcgc cggacgactt 1081 ccggttgcct ttcccggact tctgccaccg ccgccgccgc atcatggtca ccatccgtac 1141 gtcatgttcg gcggacaggc gggtctacat ggcttgggcc tgctttccac cggctgtcag 1201 gatcccgatt ctggatcggt ggacaatgaa caggatgctg atcccgaaga tgacaacgac 1261 tttgtgtacg tggacatgca ggccaatagc tctagtccgg cggcctccag cgaggatcag 1321 gaggaacacg aacgggataa tgagcaggat gaggagatgc actgcagctt gagcctggcc 1381 agcagtagta gcattgccgc cgatgaggag cgggcagctg accagccatt ggatttcagc 1441 cttcacaagc gtcgcaagtc ggagcaggat cgggaacagg agcaggagca ggagcaggaa 1501 cgggagcggg aggcggaaaa ggagcaggaa caggatgtgg aatccgacaa ggagcacgaa 1561 cccgaacagg agcatgagct ggagcgtgag aagcgctcgc ccagcgatgc cttctccatg 1621 gatcagttgc tgggcaagcg taagcgtcac gacagcaccg cctccagctc cgcctgttcc 1681 acggcagccg cctcctccgc ctctagttcc tccgccagcg ctagcgccaa tccaccacag 1741 acgagcatca aaatggaact ggacccggat agcgacagtg cctacatgac cagccggcgg 1801 caaatgctcc cactgcccgt tctggacctc gaggagcatc atcatctgcg cctgctgcag 1861 acccagatgt ttgccgccgc agcggctgcc gctgccacca gccaggcacc gcccaccgcc 1921 ttcctgccgg cgggatcacc cgtggatctg gccaaggact cgccgcccat gtggagtctc 1981 ctctccgaaa tgtaccgctc catgctgctg aagacacagc accagcaata caaccaccat 2041 caccagctgc agcagcaaca ccagcaggag cagcatcatc atctgaccct gagccaccac 2101 catcaggagc agcaccatca tctgggtcat caccacatgg gtcaccacca ccatcatcac 2161 catcagcacc accaacagca gccgcaacag caatcgccgg cggccacgaa tgcgccgatt 2221 tccgtctaat gtccagactg ctgatccatg gcgatgattt ctagatgatt tccttagtca 2281 aatttgtttt tatatttttt tttttgtgtg tgaatcgtat tttaagaaga atacatttgg 2341 tggcgtgctg cattacacaa aaaggtggag cttcaggtgg tggggctgtg ccacagcttg 2401 accattaaat ggctggcact cctcctcagg cgcgaccccg caacacccgc aaccaatgcc 2461 actaagtacc ccaccccccc tctgaaaact ggaattgctc cgaaactaag ctttttctgc 2521 tcgtacatgt gttatatgga tttttttttt tttggaaacc tatgtataat gtataatgta 2581 tactgtagtg cgacatctaa gtgtatagta ttcaatccgt tcctcagtgt gaatgtgcag 2641 atgcatgaat gagagtgtgt gtgtgtgtgt gtgtgggatc ccaggatcgg atccaaaaaa 2701 aaaaaaaaaa ttaaagtctg tcatctgaaa agcgggctgg gcagtgcaga agcggggatt 2761 ttggaacggg ttccgtttcc ctgccccctc tatcggtgta caacgaagta ttgatattta 2821 taacgaaata tatattatga atggcatata ttaaatagtt ttaagacaat ttttttcgta 2881 gccaataaaa ctatattgta ttgtataact tggatgtact aacacagcaa gcaaattcta 2941 ttgaaacata tccccccccg tgtgttaaaa aaataaaaaa ccagaagaga ttcaattcaa 3001 ccaatcccta aagaaaaaaa ataaacccaa aaaaaaaaaa aaa // LOCUS DMDM11 5465 bp DNA INV 07-NOV-1995 DEFINITION D.melanogaster micropia-Dm11 retrotransposon. ACCESSION X14037 NID g1030730 KEYWORDS integrase; nucleocapsid protein; protease; retrotransposon; reverse transcriptase; RNase H. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 5465) AUTHORS Lankenau,D.H., Huijser,P., Jansen,E., Miedema,K. and Hennig,W. TITLE Micropia: a retrotransposon of Drosophila combining structural features of DNA viruses, retroviruses and non-viral transposable elements JOURNAL J. Mol. Biol. 204 (2), 233-246 (1988) MEDLINE 89125583 REFERENCE 2 (bases 1 to 5465) AUTHORS Lankenau,D.H. TITLE Direct Submission JOURNAL Submitted (11-OCT-1995) D.H. Lankenau, German Cancer Research Centre, Neuenheimer Feld 280, 69120 Heidelberg, FRG FEATURES Location/Qualifiers source 1..5465 /organism="Drosophila melanogaster" /transposon="micropia-DM11 retrotransposon" /strain="CantonS" /db_xref="taxon:7227" /lab_host="DKFZ Heidleberg" /clone_lib="Charon 4A lambda Maniatis library" /chromosome="multiple insertions 16-32" misc_feature 1..4 /gene="micropia" /note="target site duplication" /db_xref="FlyBase:FBgn0002745" gene 1..5465 /note="micropia element" /gene="micropia" /allele="" /db_xref="FlyBase:FBgn0002745" repeat_region 5..9 /rpt_type=INVERTED LTR 5..480 /gene="micropia" /db_xref="FlyBase:FBgn0002745" mRNA 353..5400 /gene="micropia" /note="micropia full-length RNA" /db_xref="FlyBase:FBgn0002745" repeat_region 476..480 /rpt_type=INVERTED misc_binding 481..493 /gene="micropia" /db_xref="FlyBase:FBgn0002745" /bound_moiety="Leu tRNA primer" CDS 544..3705 /gene="micropia" /codon_start=1 /db_xref="FlyBase:FBgn0002745" /product="polyprotein" /db_xref="PID:g1030731" /db_xref="FLYBASE:FBgn0002745" /translation="MQNRNLAELVKIMQKTPAREQQPSYDVKLPKFNPDAACVEAAKW CSTTDIILTEHPLKGSKLITALSNCMEGTASQWLTQISYQGMTWQEFQELFLQRFETE ETPAATFLNLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDS RLQRVLFTSNVRTRSKLQAELKAFTFDKKRHARDDNLGPDQKNRKASPVVCHFCSKPG RRIAECRSKMRQDRRAKPQREKSNVTCYRCGQPGHFSNQCPKNGTAAKQDVTQQKTVN QCCVTEPKGSLHQRGEIYPICFDSGAECSLIKDDISSKLSGKRINNTVMIKGIGGGSV CSTLQILSEVTINENIMEILFHVVPNEEMRNDILIGREILKQGFYVILTSDNFKVVKS KTVNNCSVTERSFTLSDIDTELVDNEKAQLIELLEKHSTSFTNGIPHTRVNTGEMKIR LIDPTKTVQRRPYRLSPEEREVVRMQVSELIRCNIVRPSCSPFASPMLLVKKKNGTDR LCVDFRELNSNTISDKYPLPLISDQIARLRGANYFTCLDMASGFHQIPIHPESVEYTA FVPDGLKNAPSVFQRTVINALGDLANSFVIVYMDDIMVVSPTKELALERLKTVLNVLT KAGFTFNLAKCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGL ASYFRKFVSGFSQLMKPLYSLSSGSGKITWSAELEEIRLKVVTILTNEPALVIFDPQY PIELHTDASACGYGAILLHRIESKPHVIEYFSKTTTSVESRYHSYELETLAVVKAVKH FRHYLIGREFVVYTDCNSLKASRTKIDLTPRVHRWWAYLQSFNFEIQYREGKRMAHVD FLSRNPLSPEHILSINKIPEKRVNLSEISSTWLLAEQRLDLEIIEIVNKLESDELAEN LAKTYDLRKGVLYRKVQRRGRTSYLPVVPRAFKWSVINQVHESIMHLGWQKTLDKVYQ YYWFAKMNKYVRKFVSNCITCRSVKSSSGKVQAELHSIPKTSIPWHTIHIDITGKLSG KSDLKEYVIVQIDAYTKFVYLLP" mRNA 3525..4415 /gene="micropia" /db_xref="FlyBase:FBgn0002745" /product="polyprotein" repeat_region 4470..4630 /rpt_type=TANDEM primer_bind 4939..4956 /gene="micropia" /db_xref="FlyBase:FBgn0002745" LTR 4957..5461 /gene="micropia" /db_xref="FlyBase:FBgn0002745" repeat_region 4962..5129 /note="large LTR tandem repeats including 4 steroid receptor binding sites" /rpt_type=TANDEM enhancer 5170..5179 /gene="micropia" /note="NF-kB like enhancer element" /db_xref="FlyBase:FBgn0002745" CAAT_signal 5215..5219 /gene="micropia" /db_xref="FlyBase:FBgn0002745" TATA_signal 5247..5254 /gene="micropia" /db_xref="FlyBase:FBgn0002745" protein_bind 5323..5326 /gene="micropia" /db_xref="FlyBase:FBgn0002745" /bound_moiety="initiation factor" polyA_signal 5387..5392 /gene="micropia" /db_xref="FlyBase:FBgn0002745" terminator 5400..5403 /gene="micropia" /db_xref="FlyBase:FBgn0002745" repeat_region 5414..5438 /rpt_type=TANDEM repeat_region 5462..5465 /rpt_type=DIRECT BASE COUNT 1681 a 1051 c 1264 g 1469 t ORIGIN 1 tacatgtcgt ggcgaaaata atgagtatgc gtgtagtcgc tgtttacttc ttctccatgt 61 tccctttgct attatgcgtg ttcctattta tgaacacgtg gcgaaaataa taaatgcgtg 121 tagtcgccgt ttacttcttc tccatgttcc ctttgctatt atgcgtgttc ctatttattg 181 tcaatgtgtg aggatgaata gatgaattat ctatgaacgg gattttgcaa aaacgacttg 241 cgctgcttgg ttagaaaggg aaaactatat aatgaaaagg gaatgccaaa aattgagaag 301 agacaaagca ggctgcacga agctggagtg agggcattaa tcgtggagaa gccaaagcag 361 acgcaagtgg actcgttgac tgcgcacagc tgcataaaat tatatagtaa aaagagattt 421 gagcgacgct gatatggacg gacggacgga cgcgaggccc ctgatattct taacccgaca 481 tcagaagtgg gatctgtgcc acaccctgca ttttctgagg atcagtggcg tgcagtagtg 541 gaaatgcaaa atcggaattt ggctgaactt gtaaaaatca tgcaaaagac gccggcacgt 601 gagcagcaac ctagttatga tgttaagcta cccaaattta accctgatgc tgcatgcgta 661 gaggcagcaa agtggtgttc aacaaccgat ataattctaa ctgagcaccc ccttaaagga 721 agtaaattga tcacggcact aagtaactgc atggagggaa ctgcatctca gtggctaaca 781 caaatctcgt accagggtat gacttggcaa gagttccagg aattatttct gcagcgcttt 841 gaaaccgaag agacgccggc cgctacgttt ttaaatttac tcaacagccg cccgactgcc 901 gccgaatgtt acgcggtgta tgcgagtcgg ctggtgacgc agctgactac aaagtggcgg 961 aatatggaaa tagaagaaat tgccgttaca actgttcttg cgcatatggc aaacattgac 1021 agtcgtttgc agcgcgtcct cttcacatcc aatgtgcgta ccagaagtaa gctacaggcg 1081 gagttaaaag cgtttacgtt cgacaagaag cgacatgctc gagatgacaa ccttggacct 1141 gaccagaaga accgtaaggc atcgccagtt gtatgccact tctgttcaaa gccgggacgt 1201 cgaattgctg aatgccgaag taaaatgcga caagatagac gggcgaaacc gcagcgtgaa 1261 aaatcaaatg ttacgtgcta tcggtgcggc caaccgggac atttctccaa ccagtgcccg 1321 aaaaacggaa ctgcagccaa acaagatgtg actcaacaga agactgttaa ccaatgttgt 1381 gtgactgagc caaagggaag cttgcatcaa cgaggtgaga tctatccaat ttgtttcgat 1441 tccggtgcag agtgctccct tattaaagac gacattagca gtaagttatc tggtaaacgt 1501 ataaacaata ctgtaatgat aaaaggcatt ggtggtggca gtgtgtgcag tacattgcaa 1561 atcttgagtg aagtcactat aaacgaaaat attatggaaa tattatttca tgtagtcccg 1621 aacgaggaaa tgaggaatga tattctgata gggcgagaaa tacttaaaca aggcttttat 1681 gtaattttga catccgataa ttttaaagtt gtaaaatcaa aaactgttaa taattgttcc 1741 gttactgagc gatcgtttac tttgtccgat attgacaccg aattagtcga caatgagaaa 1801 gctcaattaa ttgagttact tgaaaagcac tcgacttcat ttaccaacgg gatacctcat 1861 actcgagtaa atacaggcga aatgaaaatc cgtttgattg atccaactaa aactgttcag 1921 cgccgacctt acagacttag ccccgaagag agagaagtag tgcgaatgca ggtgagcgaa 1981 ttgataagat gtaatattgt tcgcccaagt tgctctccct ttgctagccc catgttgctc 2041 gtcaaaaaga agaacggaac cgaccgtcta tgtgttgatt ttagagagct aaactcgaac 2101 acgatttcgg ataaataccc cttgccgctt atcagcgatc aaattgctag acttcgcgga 2161 gcaaattatt tcacatgcct ggatatggca agtggtttcc accaaatccc gattcaccct 2221 gaatccgtgg aatatactgc atttgtgccc gacggcctca aaaatgcgcc atctgttttc 2281 cagcgcacag tcataaatgc acttggtgac cttgctaact cttttgtaat cgtttacatg 2341 gacgacataa tggtagtatc gccaaccaag gaattggctt tggaaaggtt aaaaactgtt 2401 ttgaatgttc ttacaaaggc tggttttacc tttaaccttg ctaaatgcag ttttctcaaa 2461 acaacggttc agtatttagg ctatgaagtg cgagcgggag aaattcgtcc gaatgtgcga 2521 aagatagctt ctttaagctc cttgcctcct cctcaaactg tctccggcgt tagacaattc 2581 attggcttgg cctcttactt tcgcaaattc gtgtctggat tctcccaact tatgaaacca 2641 ttgtattcac tttcgtctgg tagcggcaag attacatgga gcgctgagct ggaagagatc 2701 agacttaaag ttgtgacgat cctcacaaat gagcctgctc tggtaatctt cgacccgcaa 2761 tatcctattg agttgcacac tgatgcaagt gcctgtggat atggagcgat acttttgcac 2821 cgtatagaaa gtaagcccca tgtaatcgaa tacttcagca aaacaactac ctctgttgaa 2881 tctagatatc actcctacga gctggaaacc ttggcagtgg taaaagccgt taaacatttt 2941 cgccattacc taattggccg tgagttcgtt gtctatacag actgcaattc attaaaagct 3001 tctcgcacaa aaatagattt aacccccaga gttcaccgct ggtgggccta cttacaatcg 3061 tttaatttcg aaattcagta tagagagggt aagcgtatgg ctcatgtgga tttcctatca 3121 agaaatcctt tatcacccga acacattttg tcaataaaca agattcccga aaaacgagta 3181 aatctgtctg aaatttcaag tacttggctt cttgctgagc aacggttaga ccttgagata 3241 atagaaattg ttaacaaatt ggagtcagat gaattagccg aaaacttggc caaaacgtat 3301 gatttgcgaa aaggtgtatt atatcgcaag gtccaaagac gaggtagaac aagttattta 3361 ccagttgtac ccagagcttt caaatggtca gtaattaacc aggtacacga gtcgataatg 3421 catttagggt ggcaaaagac acttgataaa gtgtaccagt attattggtt cgctaaaatg 3481 aacaagtatg ttcgaaaatt tgtttcaaac tgcataactt gtagatcagt gaaatcatct 3541 tccgggaagg ttcaggcgga acttcattcc attccgaaga caagtatacc gtggcacacc 3601 atccacatag atataacggg gaaattaagt ggcaagagcg atttgaagga gtatgtcatt 3661 gttcagatcg atgcctatac aaagtttgtt tatctgttac cttaaagata gatgccgaaa 3721 gctgtgttaa tgctatgaaa tcttccatat ccttatttgg agtaccagat cgcattatcg 3781 ccgaccaggg cagatgtttt actagctcta agttttcaga gttttgcgta tcgcagaaag 3841 ttgaacttca cttgattgct acgggaatga gccgtgcaaa tgggcaagtg gaacgggtga 3901 tggaaacact gaaaaatttg ttgtcagtgg tagaatcaag tcaacgatcg tggcaggacg 3961 cacttggcga agtccaactt gcactgaatt gtacaatttc tcgtgccact gatgcaagtc 4021 cgttagaaat gttaattggt aaacaggctc gaccccttgg attagttccc ccatgtgaga 4081 ccgaatgtga aatagatttg gcaactgtta gagctcatgc gacagaaaat atgaattcct 4141 tagcgtctta cgacaaatcc cgatttgata gcagtagagc agccgttgac aaacaccacg 4201 taggtgacta tgtgctattg aggaatgaag aaagacacca aactaagtta gatccgaaat 4261 tcagaggacc gtttttggta actgaagtat tagagggtga caggtataca ctaaagtcgt 4321 tgacgagtaa ccgatcgttc aagtattgcc atgaatcaat caaaatgccg gatgcagaaa 4381 tcccgaatga gttaaacgag aatgtagagc aatagctgaa atatagaaac agttgaatga 4441 aaagaaaagc ccgccaatga gttcttttgt gaacgagaga tatccgtcta ggtgagacga 4501 tgaattgtga gttatccgtc taggtgagac gatgaattgt gagttatccg tctaggtgag 4561 acgatgaatt gtcagttatc cgtcaggtga gacgatgaat tgtgagttat ccgtccagga 4621 gagacgatga gtttggattg aattaataat caagtgtgtg tgaactggcg gaagatcgat 4681 atatagaaat cgataaatga taatgttaag ataagttgtg agctgatgta ttactgatca 4741 atggaactga atatgaaaat agaataagtt atcccagcaa cagtgaaata agagctgttt 4801 tgtttcttca cagaattaag atttaagaaa tacacctgat aaagtcaaac taatgaaatt 4861 aaatgttatt gaatagtgat gaaagtaggt gatcttgata tcttggtatc tcggtatcaa 4921 aagcttacac gaggacgtga aatgtcagaa tggccgtgtc gtggcgaaaa taatgagtat 4981 gcgtgtagtc gctgtttact tcttctccat gttccctttg ctattatgcg tgttcctatt 5041 tatgaacacg tggcgaaaat aatgaatgcg cgtagtccgg tttacttctt ctccatgttc 5101 cctttgctat tatgcgtgtt cctatttatt gtcaatgtgt gaggatgaat agatgaatta 5161 tctatgaacg ggattttgca aaaacgagag cgatagagct gttgctgaac gtggccactt 5221 gcgctgcttg gttagaaagg gaaaactata taatgaaaag ggaatgccaa aaattgagaa 5281 gagacaaagc aggctgcacg aaactggagt gagggcatta atcgtggaga agccaaagca 5341 gacgcaagtg gactcgttga ctgcgcacag ctgcataaaa ttatatagta aaaagagatt 5401 tgagcgacgc tgatatggac ggacggacgg acgcgaggcc cctgatattc ttaacccgac 5461 ataca // LOCUS DMDOA 2606 bp DNA INV 17-FEB-1997 DEFINITION D.melanogaster Doa protein kinase gene. ACCESSION X78715 NID g472912 KEYWORDS Doa gene; protein kinase. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2606) AUTHORS Yun,B., Farkas,R., Lee,K. and Rabinow,L. TITLE The Doa locus encodes a member of a new protein kinase family and is essential for eye and embryonic development in Drosophila melanogaster JOURNAL Genes Dev. 8 (10), 1160-1173 (1994) MEDLINE 95011531 REFERENCE 2 (bases 1 to 2606) AUTHORS Yun,B. TITLE Direct Submission JOURNAL Submitted (07-APR-1994) B. Yun, Waksman Institute, Rutgers University, PO Box 759, Piscataway, New Jersey 08855-0759, USA REMARK revised by [3] REFERENCE 3 (bases 1 to 2606) AUTHORS Yun,B. TITLE Direct Submission JOURNAL Submitted (13-APR-1994) B. Yun, Waksman Institute, Rutgers University, PO Box 759, Piscataway, New Jersey 08855-0759, USA REMARK revised by [4] REFERENCE 4 (bases 1 to 2606) AUTHORS Rabinow,L. TITLE Direct Submission JOURNAL Submitted (01-JUN-1994) L. Rabinow, Waksman Institute, Rutgers University, PO Box 759, Piscataway, New Jersey 08855-0759, USA COMMENT On Apr 17, 1994 this sequence version replaced gi:471295. FEATURES Location/Qualifiers source 1..2606 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="embryo" /clone_lib="3-12 hr. embryonic cDNA library" /chromosome="3R" /map="98F1-2" gene 1..1554 /note="Darkener of apricot" /gene="Doa" /allele="" /db_xref="FlyBase:FBgn0000480" CDS 1..1554 /gene="Doa" /note="1..39 genomic seq." /codon_start=1 /product="Doa kinase" /db_xref="PID:g472913" /db_xref="FLYBASE:FBgn0000480" /db_xref="SWISS-PROT:P49762" /translation="MCVRFQMPRTRRLHHSRDRSSAGTRDKRRRHDTADHSPPLAEAP SPPRITNTHHTRSAAKRRRHELDAKKAQISKEPTFDDSISTRRRKERSKRSHRKSPAA SRRQHKYRYRDETSHSSSRRRHRDRAKDERDSGRNNRQSQAKTAKPVIQDDADGHLIY HTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINAL EKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHM AYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKINREVRRVKNTDVRLIDF GSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYLGITLFQTHDN REHLAMMERILGQIPYRMARKTKTKYFYHGKLDWDEKSSAGRYVRDHCKPLFLCQLSD SEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDRLPPHHRVGEVSNKQPLSSGSSS RERSHSLSR" old_sequence 1156 /gene="Doa" /citation=[3] /db_xref="FlyBase:FBgn0000480" /replace="n" BASE COUNT 762 a 635 c 574 g 635 t ORIGIN 1 atgtgtgtac gttttcagat gcccagaaca aggagactcc accactcaag ggatcgctcc 61 tcggcgggca cacgagacaa gcgccgacga cacgatactg ccgatcattc gccaccccta 121 gctgaggccc catcgccgcc gcgcatcacc aacacacatc acacaagatc ggcggccaag 181 cgaaggcgac acgagctcga tgccaagaag gcccagatat ccaaggaacc cactttcgat 241 gacagcatct caacccgccg acgcaaggag cgttcaaagc gttcgcaccg caagtcgccc 301 gccgccagtc gacggcagca caaataccgc tacagggacg agacgtccca ttcgagctcc 361 cgccggcggc accgtgatcg cgccaaggac gaacgcgaca gcggacgcaa caaccgccag 421 tcgcaggcta agacagcaaa gcccgtcatt caagatgatg ctgatggtca cttaatttac 481 cacaccggag acattctcca tcacagatat aagatcatgg ccacactggg cgagggaact 541 tttggacgtg tggtcaaggt caaagatatg gagcgtgatt actgcatggc tttaaagatt 601 attaagaacg tggaaaagta ccgcgaagct gccaagctgg aaataaatgc tttggaaaag 661 attgcccaaa aggatccgca ttgtgatcat ttgtgcgtca aaatgattga ctggtttgat 721 tatcatggac acatgtgtat agtttttgaa atgttggggc tcagtgtttt cgattttttg 781 cgagagaaca actatgagcc atacccgctg gaccaagtgc gccatatggc ctatcaatta 841 tgctactctg tgaaatttct acatgacaat cgtttaacgc acacagatct caagccggag 901 aacatactct tcgtcgactc ggattatact tctcactata atcataagat taaccgcgag 961 gtgcgccgcg tcaagaatac ggacgttcgc ctaatcgact tcgggtcggc caccttcgac 1021 cacgagcacc acagcacaat tgtctcgacg cgacattacc gcgcgccaga ggtcatactg 1081 gagctggggt ggtcacagcc gtgtgacgtt tggtccattg ggtgcatctt gttcgaactg 1141 tatctgggaa tcacgctctt ccaaacgcac gacaatcgcg aacacttggc catgatggag 1201 cgaatcttgg gacaaatacc atatcgcatg gcacgcaaaa ccaaaacaaa gtacttctat 1261 catggtaagt tagattggga tgagaagtcc agtgcgggtc gctacgtccg tgatcactgc 1321 aagccgttgt tcctgtgcca gctgagcgac agcgaggacc actgtgagct cttcagtctg 1381 atcaagaaga tgctggagta cgagccgtcg tcacgcatca cgttaggtga ggccctgcat 1441 catccgttct ttgataggct gccaccacac catcgagtag gtgaggtcag caacaagcag 1501 cccctttcgt cgggcagcag cagccgcgaa cgatcgcata gcctctccag atgagaatta 1561 cagcgatttg gttattgttg acagacagcg ctaattaagc actcactcat gcaaacatac 1621 actcaaggca gtcgtccagc aacgtcttgc acccgactcg tagagtagac cagcaacttt 1681 acgacgaacc ctattttaag agcaaaagtc ttattttaaa tttttgaact tgacttgtat 1741 agatgtttat tatacaaaaa tccattgatc ccttttgatc ctttgtttcc aaatacttcg 1801 agcacatgtt gctgtgcatt atatttagag ctgtgtagcg ccatcgtgcg cttgtgcatt 1861 gtaccatacc cgccaacagt gtttgttctg taatgataac caaatcgtgt atattattga 1921 aagtgcggtg cgtcttcccg acaccagaac ctaattgtaa atgtcttgca ttgtgcacac 1981 cccaaggtgg aggagactaa ttgaaccgac tgcaaaccga taattggaat atacaaatgt 2041 agttgtaaaa taagaaaggt tcgcttaagc gctagttgga atgcatcccc atgtctacac 2101 ctgtcactga accgggagcc gactaatttg taattaatgc accatttcga gagcgtgaac 2161 tgaaagctaa tgcaagccat tatgtacacc gcccacgaat gtacggatta ttgtaaatgt 2221 aaagagcaat tgttatgcca ccatgtgtac acttcagcga tcgcagcgca ttttgtgtaa 2281 attcagtagc agccccagag tcatctctct tagaatacgt tttcaaatgt gtagaaccgt 2341 tgccggcctg ttttgttcgt tttcgtttac aaccgaatat cgaaagatca acccatttac 2401 acattgctac acacagagta taattgaata tacttataca tacttaattc aaatgattgt 2461 gagttagttt aatattacat aaatattaat tataaattac attatttgca atttaacccg 2521 atcaaccagc atataagata aaaaccaata ttgtcaagtt attaaaaagt gaaataaatc 2581 ttaaataaaa aaaaaaaaaa aaaaaa // LOCUS DMDRIBBLE 1580 bp DNA INV 19-JUN-1997 DEFINITION Drosophlila melanogaster DNA for dribble gene. ACCESSION Z96931 NID g2208949 KEYWORDS dribble. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1580) AUTHORS Chan,E.H. TITLE Direct Submission JOURNAL Submitted (17-JUN-1997) Chan E.H., Genetics, University of Cambridge, CB2 3EH Cambridge U.K REFERENCE 2 (bases 1 to 1580) AUTHORS Chan,E.H. and O'kane,C.J. JOURNAL Unpublished FEATURES Location/Qualifiers source 1..1580 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="2" /map="21D" gene 1..1214 /gene="dribble" 5'UTR 1..134 /gene="dribble" CAAT_signal 8..11 /gene="dribble" CDS 135..1118 /gene="dribble" /codon_start=1 /db_xref="PID:e322441" /db_xref="PID:g2208950" /translation="MSESEAEETKISTEPVDNAWSMKIPAFRQEDNPHGMVEESSFAT LFPKYRERYLKEVWPLVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMI KLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELL TDCYVLVQGNTVSALGPYKGLQQVRDIVLETMNNVHPIYNIKALMIKRELMKDPRLAN EDWSRFLPKFKNKNISKRKQPKVKKQKKEYTPFPPSQPESKVDKQLASGDTSSTRSRS KRSATRSAPKSRRRRPSARTNAETRTLSRPRRSRLLQVGRRRMAPPPARWT" polyA_signal 1209..1214 /gene="dribble" /citation=[2] BASE COUNT 468 a 369 c 405 g 338 t ORIGIN 1 tatctatcaa taatattaac caaccagttt tccctgatat ggtcacacgc atttaccgct 61 gatctggcag cctggccaaa acaagcgtgc aagaatctta cctgtagaat tagcctctga 121 aaactcgagt aacgatgagc gaaagtgaag cggaggagac caaaatcagc accgagccgg 181 tggacaatgc gtggtccatg aagatccctg ccttcaggca ggaggacaac ccgcatggga 241 tggtggaaga gagctccttc gccacgctgt ttcccaaata tcgggagcgc tatcttaagg 301 aggtttggcc tctggtggag cagtgcttgg cggagcacca cctgaaggcg gagctagatt 361 tgatggaggg gagcatggtg gtgaagacca gtcgcaagac ctgggatccc tacatcatca 421 tcaaggcgcg ggatatgatc aagctgatgg ccagaagtgt tcccttcgag caggccaagc 481 gggtcctgca ggacgacatt gggtgtgaca tcatcaaaat cggaaacctt gtgcacaaga 541 aggagaagtt cgtgaagcgg cgacagcgtt tgatcggacc taacggcgcc acccttaagt 601 ccattgaact gctcaccgat tgctacgttt tggttcaagg aaacacagtc tccgccttgg 661 gtccttacaa gggccttcag caggtgcggg atatagtcct ggagaccatg aacaatgtgc 721 accccatata caacattaag gctttgatga tcaagcggga gctgatgaag gatccgcgcc 781 tggccaacga ggactggtcc cgattcctgc ccaagttcaa gaacaaaaac attagcaaac 841 gcaagcagcc gaaggtcaag aagcaaaaga aggagtacac cccattcccg cccagccagc 901 cggagagcaa ggtggacaag cagctggcca gcggagatac ttcttcaacc aggagcagaa 961 gcaagcgaag cgcaaccagg agcgcaccga aaagcagaag gaggcggcca agcgccagga 1021 cgaacgccga aacaaggact ttgtcccgcc cacggaggag tcggctgctt caagtcggaa 1081 gaaggaggat ggctcctcct ccagcaaggt ggacgtgaag gccctgaagg ccaagctgat 1141 caaggccaac aagaaggcga ggagcagctg atagttttcc tagttttaat tagtagtagg 1201 acctattcaa taaaaattga ttttctgagc aacgtgtaaa tagaaatctt aaggtttact 1261 aatgggatga aaagtttgtg gggacgaact cgtattaatt ctatttgttt ttaaaagcca 1321 atctcaaaaa atgcaatgga tacataatgc taattcagca tataacatgc tgaatacctt 1381 atacttggaa taaaattaaa ttaaatactt atacaataat tttgattcta ttgcggtgcc 1441 cgctagtgta gagagagatc tctttctctc cctctttctc tctctctgtc gcactctctc 1501 aacaagtggc ttaatacaaa tatatacaaa actcaaaagg ccagcgaatg agccaagtca 1561 gtacgatttc tggtaccgga // LOCUS DMDROSOCN 1400 bp DNA INV 14-JUN-1996 DEFINITION D.melanogaster gene encoding antibacterial peptide drosocin. ACCESSION X98416 NID g1403301 KEYWORDS antibacterial peptide; drosocin. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1400) AUTHORS Charlet,M., Lagueux,M., Reichhart,J.M., Hoffman,D., Braun,A. and Meister,M. TITLE Drosophila Immunity: cloning of the gene encoding the antibacterial peptide droscin. Expression studies during the immune response JOURNAL Unpublished REFERENCE 2 (bases 1 to 1400) AUTHORS Meister,M. TITLE Direct Submission JOURNAL Submitted (11-JUN-1996) M. Meister, Institut Biologie Molculaire Cellulaire, UPR 9022,Immunit, Dveloppement Insecte, 15 rue Descartes, 67084 Strasbourg Cedex, France FEATURES Location/Qualifiers source 1..1400 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /map="51C 1-6" /clone_lib="lambdaEMBL4" gene 1..1400 /note="Drosocin" /gene="Dro" /allele="" /db_xref="FlyBase:FBgn0010388" TATA_signal 937..942 /gene="Dro" /db_xref="FlyBase:FBgn0010388" mRNA 967..1313 /gene="Dro" /db_xref="FlyBase:FBgn0010388" CDS 1001..1195 /gene="Dro" /codon_start=1 /db_xref="FlyBase:FBgn0010388" /product="drosocin precursor" /db_xref="PID:e249039" /db_xref="PID:g1403302" /translation="MKFTIVFLLLACVFAMAVATPGKPRPYSPRPTSHPRPIRVRREA LAIEDHLAQAAIRPPPILPA" mat_peptide 1064..1120 /gene="Dro" /db_xref="FlyBase:FBgn0010388" /function="antibacterial peptide" /product="drosocin" polyA_signal 1292..1297 /gene="Dro" /db_xref="FlyBase:FBgn0010388" BASE COUNT 416 a 326 c 292 g 366 t ORIGIN 1 ctgcagattt atttcccatt taatggctca cacgtgccca caaaatccga ggtacatatc 61 acactctata tatagacaat tttcgcacac ttcttgaagg ccattgtcac aggttgagac 121 acttggggcg aaagccttct ttaagtcctc atttcgtatc ctgtgtatta tgtaaacttg 181 tcgcactttt caccattgat tcaatagtta tattacgcac cagaaatatt gtttggctgg 241 ctggattcgt tgaactattt aactattcga ctgtggggca aatgtgttac gtgcgtaatc 301 gataagcaga gttttcctcg cgtctggcct ctatacgagc gtttggcaag ctgcccaaga 361 gttttcccaa agagccccga aaagaaaatg ttgcgctcag aaaagcggac ggaaaagctc 421 gctcaagcgc gttccgctgt cgcacggtaa ggtgtgcttg tgtgtgtgta tgtgtatcca 481 atctaatgag atttgacgcg ttggacggca ggacttcaaa gagagcgaaa gagaggaagt 541 gtcgtcctgt cacggcgagt gcgaaagaga tgacacgagt gaaagtgaca gcttggcggg 601 aaaagttcgt ttcaaaattc cacttccttc agcagtttac aagcaccaaa aaaattatta 661 aaattaggga tgtaaacaat acatatattc aaattaaaaa aaaaaagaac aataaatttg 721 taacgtaaaa taaacagcta cataaaatgt aaagtaccga atgctgtaac tacgcaggga 781 aaacccacat taaaaaagaa taataatttt caacacgttt gccttcagtg gcctattcgt 841 tgataggcaa catgaaaagt cccaagatgg ggaatcaccg gcgaccacag ccaagacgtg 901 ccactcattc gaatctcttg ttgcatcgat ggcatctata taaagccaag tgctctgatt 961 gaaatcaaat cagttcgatt tgtccaccac tccaagcaca atgaagttca ccatcgtttt 1021 cctgctgctt gcctgcgttt ttgccatggc tgtggccact cccggcaagc cacgccccta 1081 cagcccacgc cccacctccc atcctcgccc cattcgagtg aggcgcgagg cactggccat 1141 cgaggatcac ctggctcaag ctgccatcag gccaccaccc attctgcccg cctaaagatg 1201 tgtgcatacc gcggagaagt catccgatca aatttgtttt gaaaaatctt tataaaaatt 1261 gtgaattttt tactttctgc aaacagtaaa caataaacac acgaaagaca gcaattaata 1321 atcttcaatc aattgtgaca caatgggggg ttcccatcgc ttatcagcgg tttttgtacc 1381 gaatctgctg agctctagag // LOCUS DME010298 8507 bp DNA INV 17-AUG-1998 DEFINITION Drosophila melanogaster retrotransposon-like element. ACCESSION AJ010298 NID g3426088 KEYWORDS polyprotein; retrotransposon-like element. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 8507) AUTHORS Tulin,A.V. and Kogan,G.L. TITLE New retrotransposon of Drosophila melanogaster JOURNAL Unpublished REFERENCE 2 (bases 1 to 8507) AUTHORS Tulin,A.V. TITLE Direct Submission JOURNAL Submitted (12-AUG-1998) Tulin A.V., Department of Molecular Genetics of Anymals, Institute of Molecular Genetics RAS, 46 Kurchatov sq., Moscow 123182, RUSSIA FEATURES Location/Qualifiers source 1..8507 /organism="Drosophila melanogaster" /proviral /strain="Batumi L" /db_xref="taxon:7227" /chromosome="X" /clone="lambda, ph1, ph3" /clone_lib="lambda, EMBL4" LTR 1..272 /note="left" polyA_signal 158..163 primer_bind 276..293 /note="18 bp homology to 3' end of Tyr tRNA" misc_feature 324..1798 /note="low melting region" CDS 1741..6456 /codon_start=1 /product="polyprotein" /db_xref="PID:e1315890" /db_xref="PID:g3426089" /translation="MPIGDDKKKLSADKPRSIFSPQGPKSPRIPSISVKTPAQISDDC ATPSKATVQRTAKNMAASDLALAKFISVSDAQANLRLRSTLRNPQLQPSRCLASVATK SEAYGTRLKRIRPLLRVPCVSRRAAASGMPILRASYSYCYSVYERCVAQLVDKIEQGH FSVHPKRTLRPRPTFPLAVGCLHAIQEFSQVTIFAGRFPDLLHAIYINNPRLTPFEKL FHLNAKTSGDAHAIVSISPLTKRGFSSAWENLIERFENKRLLVNSQLKILFNVQSIPQ ESGAALKVMQSTVQGCLTALELSGINTENWDCLLEYLCSSKLPKITLSLWEQSLHKKA DIPTWGELNTFLTERHRTLEAIDDVRPSVPSQSHSKAMNSSGPSRDGKLASDLCNKEN HPVRVCRVFSKWSVDDRSAYIKRKQLCLNYFAKGHQLRECKDRQSFTWWPASHVVAPK QPLFQQFKPFKSCKPNFRYSGQFRSKRASRCSKLFCHGSRAILLGSAIINSSHLGTNF KARALIDSGSEATFITEPLFNLIRLPFQVVQAQVSGLNQTVAAQFKNAAVSPSDLRLG RVAVGDDGLCPPSTSRKSAFLPNSAKFLRDLPDFPLADPKFYESAPIDVLIRSPHPAS VLLSGAKTNICGSLLGQETIFRWVLTGPVSASAQSRIPLFRHRSPTRTIIHWTNSSQN LGRWRIYQQSCKRIRFHVRERVGKCLRRHQCGKYVVTLPFRDPEHIGCGLGHSRSWAL AQFLKNEQRLKKDEALKARYDSVIQEYLDLKHMRQVLPTHDCNAYYMPHHAVLKPESV TTKLRVVFNASSPSSNGTSLNDILHAGPVLQSDLTVQILKWRDFRYVFSADIQKMYRQ IWVDPKHTPFQRILFRNNRGEIRDFELKTVTFGVNCAPLLAIRVLQQLAADEELSHPK ASNVIRNFMYVDDVLAGADSTEEAQLMVHELRDALNSSSSRQRWLSKRPLQRQVLSQI AKLFDPAGWLAPFIVRAKIFMQEIWLQELGWDENVPNDLFQRWLNFLQSYSVFEQIRI PRWLSFHPDFKVEHHGFCDASQKAYGAAIYVRGEVGSAIMVQLLTAKTRVAPVKTVSL PRLELCGALLLSEMAAAIIPQMPTINSKLYCWTDSTIVLAWLSKPACQWTTFVANRET KIAQATKTENWSHVQSEHNPADLASRGVSLQDLADSQLWWHGPTWLQNPRNQWPTQVN APVTDLEKRALKVHLAKAPSEELLARFSKLEKALRVLAYVYRFIQRCRKQTSPSDVHL LATEIAAAERFLISNTQRREFPVEYHCLSEKRPVPSSSAILSMNPFLDPQGLIRACGR VAASESPQYNERHPVILPYNCLLSRLLAKFTHRTTLHGGNQLMVRLIRSKYWIPRIKN LMKAVVNSCKVCVIHKRRLQSQLMGVLPKERASFSRPFTVSAWITPVRDIKNYTGRAC VITKGYVLVFVCFSTKAIHLEPTSDLTTEKFLAAFSRFVSRRGCPRQVQSDNGKTFVG AATLLSRDFLQAVKESVTNAYIHQEMQWQLFSGGTQYGRPLGSRRKKLQDAILQMHGH TKIHVRRTLHALGKNRSVP" misc_feature 2893..3078 /note="Zn-knuckles" misc_feature 4876..4902 /note="hairpin" misc_feature 8223..8235 /note="purine rich region" LTR 8236..8507 /note="right" polyA_signal 8393..8398 BASE COUNT 2245 a 2251 c 1836 g 2175 t ORIGIN 1 tgttcaagtt acgctcaccc gctgtcaccc gctgtcaccc gctctccgct ccctcttacg 61 ctctcccgct cttcacctca gagtctccaa ggagtcctcg ggcttgggat agcctaacta 121 attagaataa gcatcagtgt aaaaactaac cacgctgaat aaacatacgc ccggtcgccg 181 cgcaattacg aaaagtctag tgtttgcttt ccttcgagtg tttcttttca gcatatttga 241 attcaggaca gccatccccc tacatcccaa cattttggtc cttcgagccg gatcacctgg 301 attttcaagt ttgtccacca gcgaacaaat tataagataa gtacgaaatt tccattcctt 361 ttaattgccg gtctgcagca aaaggttcga aaatccaatt tcgttcaatt tgctgtaaga 421 tttattgtca aatctaacgg atttctccga caaaaggcaa ttaaagaaaa gtacttatcc 481 aatctcacgg gcgccgcata ttactcgccg ttctccgttc tcctttcacc ctcattcgtg 541 aaaatttcta aagtccaaat gggcgaatat atttaaatat taatccagtg cgataatgca 601 aaattccaaa tgtgaaaaag tgaataattt gtgccaagtt cagtgaaact ttctaagtcc 661 aaagctctgc caaaattggc aaaaattctg ttctcgtttc actgtgtcaa agcgaagcca 721 aacttctttt cgcaacacat ttttgcttta actccgcagt ccacttaata ccatttgctt 781 tgctatcgaa gaataccaca acgaaacaaa caacaccata ccctctggcc attcaaataa 841 catattaatt aacatttccg cagttccata tctcttacat caacatatac ctactccata 901 ctcttgcata tattcacatc ttacacaata tatcctcacc atatattaca tatattacat 961 caacatataa tatccacata tattaccgac atacattgcg catattatca gcattccttt 1021 aacgtatacc aaagtttaaa ttcgatcccg tcggcaaatc caaccacaaa taaaatttat 1081 tccaagtgcc gacgcggaaa ggcgttttct tttccatcaa ttttttccgt aaatttccaa 1141 attaatttcc gagcaataaa ttaaaagcgg ttttttcttt ttttttaaca aataacttat 1201 tgttgaaaac atttattaaa ttattaaaaa ttatataaat aatacgaccg ccaaatacaa 1261 gtcgttcacc cgacaaatat tttttcctgt attgcttgga tattaatttg tgtttgtttt 1321 agaagtactt acaacgcgga gaaaagactc caaatccacc attccatttt ctccgtttcc 1381 agttataaac aaaaaaataa ataaaatttt cttccttcta ataaacattt tattttaccg 1441 tgttcacatt ccaagtgttc caaccgtaaa taaggtggac ctaattacca taaatcacag 1501 gtcatttata caattcgctg ttcactccga gtcacctgtc caattagtct aaactacggc 1561 gtttccactt cgcaaattca acaccacttt ctcacccatt acatcctata cggtcctttt 1621 ccgctgcttt ataccgttca cggcaggaag cttaaattta ttaagtggaa tctgtctact 1681 ttttcaaaag tgtgaccggg ctccaaaaac gcttcccttc catttcgtat ttcttcgatt 1741 atgcccatcg gggacgataa gaagaaattg tccgctgaca aacccaggtc tattttttca 1801 ccacaagggc ccaagagtcc aagaatccca agcatttcgg tgaaaacgcc tgcgcagatt 1861 tccgacgact gtgccactcc atccaaagcc acagtacagc gcacagctaa aaatatggct 1921 gcttccgatc tagcgctagc caaattcatt tcggtttctg acgctcaagc gaatttgagg 1981 ctcagatcaa cactccggaa tccgcagctc caaccgtcac gatgcttagc gtccgtcgcg 2041 accaagtccg aagcctatgg gacaaggttg aaaagaattc gacctctgct cagagtgcct 2101 tgtgtcagca ggcgagcggc agcaagcggc atgcctattc tcagggctag ttacagttat 2161 tgctattcag tctatgaaag gtgtgttgcc cagctcgttg ataaaatcga gcaggggcac 2221 ttctcagtcc atcccaagcg aacgctgcgg cccaggccta catttcctct ggctgtcggt 2281 tgcctccatg cgatacagga gttttcgcag gtgactatct tcgctggccg ctttccggat 2341 cttttacacg ccatttatat taataatcca cggctgactc cgttcgaaaa gttattccac 2401 ttaaatgcca aaacaagtgg cgacgcgcat gccatagttt cgatttcgcc tctcaccaaa 2461 cgagggtttt cctctgcgtg ggaaaaccta atagagcgtt tcgaaaataa acgattgttg 2521 gtaaacagtc aattgaaaat actgtttaat gtgcagtcga taccacagga atctggggcg 2581 gccttgaagg taatgcaaag tactgttcaa ggttgcttga ctgccttaga actgtcaggc 2641 atcaacactg agaactggga ctgcctgctg gaatatctgt gttcatccaa gctcccgaag 2701 ataactctct ccttatggga gcagtctcta cataagaaag ccgacatccc gacatgggga 2761 gaactgaaca ccttcctcac agaacgtcat cgaaccctag aggccatcga tgatgtgaga 2821 ccgtccgtac caagtcagtc gcactccaaa gcgatgaact caagtgggcc ctctagagat 2881 ggcaagctgg cgtccgactt gtgcaacaag gaaaaccatc ctgtccgtgt atgtcgcgtt 2941 ttctccaaat ggtcggttga cgaccggtca gcctacatta aacggaagca gttatgctta 3001 aactactttg caaagggaca tcagcttcgt gagtgcaaag atcgacaaag ttttacttgg 3061 tggccggcat cacacgttgt tgcaccgaaa caacctcttt tccagcaatt caagcccttc 3121 aaatcctgca agcccaattt ccgctactca ggccaatttc gttccaaacg agcaagccgg 3181 tgttcaaaat tattttgcca cggctcaaga gctatccttc ttggcagtgc cataatcaat 3241 agttcccatc ttggcactaa ctttaaggca cgcgccctga tcgactccgg atcagaggcg 3301 acattcataa ccgagccact gttcaatcta attagattgc cattccaggt ggttcaagcc 3361 caagtctcgg gcttaaacca aacagtagct gctcagttca agaacgctgc agtttcacca 3421 tccgatctcc gactaggccg cgttgcagtt ggagacgacg gcctatgtcc tccctcaact 3481 agccggaaat ctgccttcct acccaattcc gcaaaatttc ttcgggatct tcccgatttt 3541 ccactggcgg atccaaaatt ctatgagagc gccccaatag atgtacttat ccggagccca 3601 catcctgctt cggtgcttct gagtggagca aaaaccaaca tctgtggctc tctcttgggg 3661 caagagacca ttttccgctg ggtactaact gggccagtgt cagcctcagc ccaaagcagg 3721 attcctcttt ttcgacacag atctcccacg cgtacgataa ttcactggac aaactcctca 3781 caaaatttgg ggaggtggag gatataccaa caaagttgca aaagaatccg attccatgtg 3841 cgagaacggg ttggtaaatg cttacgacga caccagtgcg gcaaatatgt cgttactctg 3901 ccttttcgcg acccagaaca tatcggttgc gggctagggc attctaggtc ttgggcgttg 3961 gctcagttct tgaagaatga gcagcgtcta aaaaaagatg aggccttgaa agcgagatac 4021 gattcggtga tccaggaata tctcgactta aagcacatgc gacaagttct gcctacccat 4081 gattgcaacg cctattatat gccacatcac gccgtcttaa aaccggagag tgtaactact 4141 aaactccgtg tagtattcaa tgcctccagc ccttcatcga atggtaccag tttaaatgat 4201 atccttcatg ctggccctgt cttgcagtcc gacttgacag tgcaaattct gaagtggcgc 4261 gatttccgat acgtgttcag tgccgatatt caaaaaatgt atcggcagat ctgggtagat 4321 ccgaaacaca ctccattcca gcgaatactt ttccgtaaca atagagggga aatcagagat 4381 ttcgaattga aaacagtaac ctttggagtc aattgcgcgc ccttgctggc gatccgagta 4441 ctgcagcagc tagcagctga cgaagaactc agccatccaa aagctagcaa tgtcattcga 4501 aatttcatgt atgtggatga tgttttagcc ggagcggact ctacggaaga agctcagctc 4561 atggtgcacg agctccgaga cgctctgaat tcttcttcgt cccgccagag atggctatcg 4621 aaacgtcctt tacaacgcca agtcctgtcc caaattgcca aattgttcga ccctgcaggc 4681 tggttagcac cgtttatcgt tcgagctaaa attttcatgc aggagatttg gctacaggag 4741 cttgggtggg acgaaaacgt tccaaatgac ctttttcagc gatggcttaa ttttctccaa 4801 agttattcgg ttttcgagca gatacgcatt ccacgctggc tatcgtttca tccagatttc 4861 aaggtcgagc atcatggctt ttgcgatgca tcgcaaaagg cttatggcgc cgcaatatat 4921 gtccgcggag aagtgggcag cgccattatg gtgcaactcc taaccgccaa aacccgggta 4981 gcaccagtca aaacggtttc gctcccaaga ctcgagctct gcggagcgtt attgctttcc 5041 gaaatggctg cagccatcat tccgcagatg cctacgatta actccaaact ttactgttgg 5101 acggactcca ccatagtgct tgcatggtta agcaagccag catgccagtg gaccacattt 5161 gtagccaata gggagacgaa gatcgcccag gccacaaaaa cagagaattg gtctcatgtt 5221 caatctgagc ataatccagc agacctggca agtagaggag tttccctcca agatctagcc 5281 gatagccagt tatggtggca cggaccgact tggttgcaaa atccacgcaa ccaatggcct 5341 actcaggtca acgctccggt gaccgacctg gagaagcgtg ctctaaaagt ccatctcgcg 5401 aaagctcctt ctgaagagtt gttggcacgt ttctccaagc tagagaaagc tctacgagtc 5461 cttgcctatg tttatcgctt cattcagcgg tgcaggaagc agacatctcc atctgatgtt 5521 catctactgg ccactgaaat cgccgccgcc gagcggttcc taatttcgaa cactcaacgc 5581 agagaattcc ctgtggaata tcactgccta agtgaaaagc gtccagtgcc aagttcaagt 5641 gccatcctaa gcatgaaccc gtttctagat ccgcaaggac tgatcagggc atgcggccgt 5701 gtggcggctt ccgaaagccc tcaatacaat gaacgccatc cagtgattct tccgtataac 5761 tgcctgcttt ctcgcctcct tgcgaagttc acgcatcgca caactctcca tggtggtaac 5821 cagttaatgg tgcgcctcat ccggtcgaaa tactggattc cgagaatcaa gaacctgatg 5881 aaagcagtgg taaattcgtg caaagtatgt gtgatccaca aaaggcggtt gcaaagccaa 5941 ctgatgggtg tcctgcccaa agaaagagca tcgttctccc gaccattcac ggtatcggca 6001 tggattacgc cggtccgcga tataaagaac tatacgggaa gagcatgtgt tattacaaag 6061 gggtatgtgt tagtttttgt ttgtttctcc accaaggcca tccacttaga gcctacatct 6121 gacttaacga ccgagaagtt tcttgccgct ttctctcgtt ttgtatccag gagagggtgt 6181 ccacgtcaag tccagtcaga caatggcaaa acctttgttg gcgctgccac cctgctttcc 6241 cgcgatttcc ttcaagccgt aaaagagtcg gtgacgaatg cctatattca tcaagagatg 6301 caatggcaat tattctccgg gggcacccaa tatgggaggc ctttgggaag caggcgtaaa 6361 aagcttcaag acgctatttt acaaatgcac ggccacacga aaatacacgt tcgaagaact 6421 ctccacgctc ttggcaaaaa tagaagcgtg ccttaactcc aggccgctct ctcctatgtc 6481 tgaagatccg acagacttgc tggctctgac gccagggcat ttccttgtcg ggggacccct 6541 tatgtccacg gtggaacccg aagtaaaggg ggaaacgaaa tcccttctta atcggtggca 6601 gcatttgaag gctctccatc agcagttccg tgtgcgatgg aaagaagagt acctcaaaga 6661 actccacaag cgttctaaat ggcaggtccc gtgaacttcg agctaaaata ctcgtgcatg 6721 tggagcagcg tgtggtggga tcggtcgcac ttcttgcaac gatcaccgct tcggcagtct 6781 cccgtggaat gctcgtgagc gaggcaattg gcgctagtat gttggtaatg aggactgctc 6841 gcaaacgctt ttcagcgctg agctttagga acctcgcgca cgtccgaaga ggatggatta 6901 ccgcggcaga ctcggcatcg gtaggattta atacctcggg tacgtctgct ctccacggca 6961 cgacctgcgt gcgttttgtt gacgaggagc catgtgcgcg tagtcgaatg tcgaaaggag 7021 atcgaaaacg aaatgaaaaa taacggatga ttagtgatag tgaactacaa ctaaggacga 7081 gaggagagac ctattattgt ggagattcgg aactccgtcg gcaaaagcac cttttttgcc 7141 actggacgtt taataactcc acgtgcagta cggatgttta ctacacgacg ttgccgtcag 7201 ctcctgggaa aacagactca attctgccga gccgccactc attagagggc aagttgtcgt 7261 ccttgatgac gactgttgag ttacggggtt tggactgtca ccgtctccgc tccctcttac 7321 gttctccact ccctcttacg ctctcccgct cttcaccaca gagtctccga ggagtctctg 7381 gcgcttggga gaacccaacg cattagaata agttttagtg taaaactaac cacgatcaat 7441 aaaacatacg cccggtgccc gcgctaattc tacaagtctt cgagtgtttt ttcgagtggt 7501 ctttttttca gcaaactagg aactttccag gaccagcacc ccccatcacc ccaacaacga 7561 ccatgtcatc gatggcgtcg ccaaccggcg ccaaccctgc aagcagcttc ggcctcgtcc 7621 caacgttccc gccggcacaa tccgccaact cagcgtagga gttcaccgcc acgacgaccg 7681 gaatcgacga cgccaggccc atcactctcg tcgccgctgc aacgccacag cgtgaacatc 7741 cttcccacag cgctggtcaa gatggagacc gggacgaaga ccttcagacc gcagcactca 7801 tcgatccgtg cagccccatg agctgcatcg acgcttcgtt ggcgtcagcc tttaagcttt 7861 cgatgaccaa tgttggcgac gagaaggtct gcacgacgac gattcgctcc aggatcgacg 7921 cgaacacgaa gctcgaggtc gtgctcaaga tcgagcccag ggtgcggatc cgtacacctg 7981 tccgggcatt gagcgacacc gtagtgtcca agtacaggga catcatgctg gcggatgacg 8041 ggttccatcg gcctgctacc gtatccatgg tcttaggagc agacatttat cctaaggtta 8101 tccaatccgg attcctgacc ttcgacgagg gaatgccggt cgctcaaaag accgtgtttg 8161 ggtggatcgt gtccggtgcc tgcagcttgc ctagatggct atgttgcaac cccagtgatt 8221 gcaagggggg cggaatgttc aagttacgct cacccgctgt cacccgctgt cacccgctct 8281 ccgctccctc ttacgctctc ccgctcttca cctcagagtc tccaaggagt cctcgggctt 8341 gggatagcct aactaattag aataagcatc agtgtaaaaa ctaaccacgc tgaataaaca 8401 tacgcccggt cgccgcgcaa ttacgaaaag tctagtgttt gctttccttc gagtgtttct 8461 tttcagcata tttgaattca ggacagccat ccccctacat cccaaca // LOCUS DME010387 2001 bp DNA INV 01-OCT-1998 DEFINITION Drosophila melanogaster mRNA for beadex/dLMO protein. ACCESSION AJ010387 NID g3445442 KEYWORDS beadex/dLMO gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2001) AUTHORS Milan,M., Diaz-Benjumea,F.J. and Cohen,S.M. TITLE Beadex encodes an LMO protein that regulates Apterous LIM-homeodomain activity in Drosophila wing development: a model for LMO oncogene function JOURNAL Unpublished REFERENCE 2 (bases 1 to 2001) AUTHORS Milan,M. TITLE Direct Submission JOURNAL Submitted (31-JUL-1998) Milan M., Developmental Biology, E.M.B.L., Meyerhofstrasse, 1, 69117-Heidelberg, GERMANY FEATURES Location/Qualifiers source 1..2001 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 276..1217 /gene="beadex/dLMO" CDS 276..1217 /gene="beadex/dLMO" /codon_start=1 /product="beadex/dLMO protein" /db_xref="PID:e1316380" /db_xref="PID:g3445443" /translation="MMTMDITKTEPGLVGLSSNQQQQQQQQSQQSNAGMNSGGQNNGP NPNGNGNVVNVVNSGGAGGGNNGNGNVQSIAAAANNNNNNNNNGSQLCAGCGKHIQDR YLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRLFGNTGYCAACS KVIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRFYLCENKILCEYDYEERLVFAS MANHPMLKRHVSSLGQGSPTGAAGAQNTAGGLLGGGPGGGNVNGVGMVNGPRTPGDHN NNNNGPQTPTGGGSPFAAAAAAAAAAAHMKNQLGASS" BASE COUNT 558 a 499 c 519 g 425 t ORIGIN 1 gaattcggca cgagtttatg ttattcaatt ttagcgctaa ttgaataaca taaacaataa 61 gcaaaaacgc attcctctct ctctgtgcag caacaacaat tgaataataa cgaccggacc 121 ggaccgaacc gaaccgaccg caaaagctaa ataaataaat aaataaatac acaacatacg 181 caattacaac agcaacagta agagccttgt gcttcctgag aacaacaaat accacaacaa 241 caaacagcag gaacaacaac tcaatttctg catatatgat gactatggac attaccaaaa 301 ccgaacccgg tctcgtcggg ctttcctcca accaacagca gcagcagcag cagcagtcgc 361 agcaaagcaa cgccggcatg aacagcggtg gccagaacaa cgggcccaat cccaatggca 421 atgggaacgt ggtcaatgtg gtcaactccg gtggtgccgg tggcggcaac aatggcaacg 481 ggaatgttca gagcatcgcc gccgctgcca acaataataa caataacaac aacaacggca 541 gccaattgtg cgccggctgc ggcaagcaca tccaggaccg ctatctcctc cgcgccctgg 601 acatgctgtg gcacgaggac tgcctcaagt gcggctgctg cgactgccgc ctgggcgagg 661 tgggctccac gctctacacc aagggcaacc tgatgctctg caagcgggac tacttgagat 721 tgtttggcaa cacgggctac tgcgccgcct gcagcaaggt gatcccagcc ttcgagatgg 781 tgatgcgtgc aaggaccaat gtctatcact tggagtgctt cgcttgtcag cagtgtaacc 841 acagattctg tgtgggcgac cgtttctacc tgtgcgagaa caagatactc tgcgagtacg 901 actatgagga gcgcctggtc ttcgcatcga tggccaatca tccgatgctc aagcgacacg 961 tctcctcctt gggccagggc tcaccgacgg gagcggctgg ggcgcagaat accgctggtg 1021 gattgctggg cggcggaccc ggtggcggca atgtgaatgg cgtgggcatg gtcaacggac 1081 cgcgcacccc tggcgatcac aataacaaca acaatggccc acagacaccg accggcggtg 1141 gctcaccgtt tgccgctgct gctgctgccg ccgccgccgc tgcccatatg aagaatcaac 1201 tgggcgcgtc cagctaaaat aaagccctgg gcatgggcgc cgctggggct gttgtgccgg 1261 gatctggagt cggcgctgga gttggagttg gagttggagc ggcgagtcag caattctact 1321 cgggcttcgg actacagcat cagcaccagc atcagcagca tcatcaacag cagcagcaac 1381 agcaacagct catgggattg ggcctaggaa tgggcggcgg tggaggagta ggaggaggag 1441 gagcaggatc cgccggtgga ccaggcggag ggggagcagg aggaggaggc gttggcagca 1501 tcggaagcgg ctgcaagcgc taccaaagaa agttttacaa ccgcaactga ggaaatcgac 1561 gggcgagaaa acgctagcgg aaaggatgca gaaatccaga atcgatattc aaatcttcgt 1621 ttgctttgac tgagttcaag ttttatagtt ttaaaggcct agtttagtta gcctacagaa 1681 aagtacttgc tgaatttgca gacattttta gatcctaaca tttaagagac aatatgttta 1741 cttagttcta ttcgagaata accgccccat ttgtttttaa actagtttta ttttcgtttc 1801 cactacatac tgtacatatt ttccttgtaa actgttgacg tattagcggg atcctttttt 1861 ttttttacat actccatata gatatattcg tatttatcta tgtatatgca taaataattt 1921 tattttcacg ctcgaagcgt gcggtgccaa aagaaattca aagcagtgcc aaaaagttaa 1981 aaaaaaaaaa aaaaactcga g // LOCUS DME17355 1543 bp DNA INV 24-SEP-1998 DEFINITION Drosophila melanogaster PPN 58A gene. ACCESSION Y17355 NID g3650293 KEYWORDS PPN 58A gene; serine-threonine protein phosphatase. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1543) AUTHORS Armstrong,C.G., Dombradi,V., Mann,D.J. and Cohen,P.T. TITLE Cloning of a novel testis specific protein serine/threonine phosphatase, PPN 58A, from Drosophila melanogaster JOURNAL Biochim. Biophys. Acta 1399 (2-3), 234-238 (1998) MEDLINE 98438740 REFERENCE 2 (bases 1 to 1543) AUTHORS Cohen,P.T.W. TITLE Direct Submission JOURNAL Submitted (29-MAY-1998) P.T.W. Cohen, Medical Research Council Protein Phosphorylation Unit, The University, Dundee DD1 4HN, Scotland, UK FEATURES Location/Qualifiers source 1..1543 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone_lib="lambda EMBL3 (genomic)" /map="58A 1-4" gene 429..1504 /gene="PPN 58A" CDS 429..1403 /gene="PPN 58A" /codon_start=1 /product="serine-threonine protein phosphatase" /db_xref="PID:e1325611" /db_xref="PID:g3650294" /translation="MMKKLLSNGSNKNKTLKFDEGINLDQIIAKLKLIGEIGSVIQIS VREIEAVCSRAREVLLKQPTLLEIPAPINLLGDIHGQYLNLLRYFESNGYPPDSVYLL LGDYVDRGKQSIETLTLLLALKARYPTKFYLLRGNHECSSINHFYGFYDECKRRYTVK LWRTFVDCYNCLPLAAIIEENIFCCHGGLSPHLFSMQQIREIRRPIEIPESGLICDIL WSDPDLRIMGWGPNERGVSHTFGSDVVSAFLHRFKLNLICRGHQVVEDGYEFFAKRQL ITIFSAPNYCGEFDNAGAMMCINQDLLCTFRVQRPILSEQRRLSDISV" polyA_signal 1498..1504 /gene="PPN 58A" BASE COUNT 448 a 310 c 379 g 406 t ORIGIN 1 ccgtcggcca aagtgtccat tatgttgatt tgaaaaataa aagcaacgga tgcgattgct 61 cacacaaaga tgaagggcgg actgacaatt ggcgaggagt ttacagagga gggggggggc 121 ttataaggcg ggattttccg ggtggacaga aggggtgggt gggggcgttt agcatggact 181 ggtgattcaa atttagttga ttgaaagaaa tgacagtaat gtggctttta aatggtttta 241 gtctgatggg ggatttacta tgaaattgaa gaaacaaaag attaacaaat aaaatttaac 301 atttccattt catctacctt gattttgctc tcaaaaatcc taggaaaaat aaaccagcaa 361 actgctgcat aagaaagccc ttcttacccc acacatgatt gcgattcaaa atttcgtgtg 421 ccgaaaatat gatgaagaag ttactaagca acggctcgaa caaaaataaa actcttaagt 481 tcgacgaggg aatcaacttg gaccaaataa ttgcaaagct aaaactaatc ggagagatag 541 gatccgtgat tcagatttcc gtccgggaaa tcgaagcggt ttgttctcgg gccagggaag 601 tactgctcaa gcaaccgact ctgctggaga ttcctgctcc gattaattta ctgggagaca 661 tacatggtca gtacctaaat ctgttgcgct atttcgagtc caatggctat ccgccggatt 721 cggtgtatct gctactgggt gattatgtgg acagaggcaa gcagtccatc gaaacattga 781 ccctgctact ggccctcaag gcaaggtatc cgaccaagtt ctacctacta agaggaaacc 841 acgagtgctc cagtataaat cacttctacg gattctatga cgagtgcaaa aggcgataca 901 cggtgaagtt gtggcgcact tttgtagatt gctacaactg cctgccactg gcggcgatca 961 tcgaggagaa tatcttctgt tgccacggcg gtctgagtcc ccatctgttt agcatgcagc 1021 agatacggga aattcgccgg cccatcgaaa taccggaatc cggattgata tgcgatattc 1081 tgtggtccga tcctgatctg cggattatgg gctggggtcc caacgaaagg ggcgtgagcc 1141 acaccttcgg ttcagatgtg gtcagtgcct tcttgcaccg attcaaattg aacctcattt 1201 gtcggggtca ccaggtggtc gaggatggct acgagttctt cgccaagcgc cagctgatca 1261 ctattttctc ggccccaaac tactgcgggg agttcgataa tgctggggcc atgatgtgca 1321 tcaatcagga tttgttgtgc acctttcgag ttcagaggcc aatactatcg gagcagagga 1381 gactatcaga tataagtgtt taaaggttta aagattcatc cgtttgatca ttgtaagtag 1441 tttatttttt aaaccatatt gtaaattgca tatccagtta gcgttataag aagcacaatt 1501 aaaatataaa cagttgcaat tcaaaataat actttaaaaa acg // LOCUS DME223042 3578 bp DNA INV 03-FEB-1998 DEFINITION Drosophila melanogaster noisette gene. ACCESSION AJ223042 NID g2832434 KEYWORDS noisette gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3578) AUTHORS Meyer,V., Oliver,B. and Pauli,D. TITLE Multiple developmental requirements of NOISETTE, the Drosophila homolog of the U2 snRNP-associated polypeptide SF3a60 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3578) AUTHORS Pauli,D. TITLE Direct Submission JOURNAL Submitted (05-JAN-1998) Pauli D., Zoology and Animal Biology, University of Geneva, 30 Quai Ernest-Ansermet, Geneva 1211, SWITZERLAND FEATURES Location/Qualifiers source 1..3578 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3R" gene 1404..2915 /gene="noisette" CDS 1404..2915 /gene="noisette" /function="splicing" /codon_start=1 /db_xref="PID:e1249311" /db_xref="PID:g2832435" /translation="METLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLK YLMELHHNSTSQLRDLYEDKDNERKAEIAALSGPNEFNEFYARLKQIKQFYKSHPAEV SVPLSVEFDEMIRVYNNPDDMSALVEFTDEEGGGRYLDLNECYELYLNLRSVEKLDYI TYLMSFDHVFDIPRERKNREYRIYIETLNDYLHHFILRIQPLLDLEGELLKVELDFQR QWLMGTFPGFSIKETESALANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLKCGG TLEERAQRLFSTKGKSTLDPALMAKKPSAKTASAQSREHERHKEIAQLEALLYKYADL LSEQRAATKENVQRKQARTGGERDDSDVEASESDNEDDPDADDVPYNPKNLPLGWDGK PIPYWLYKLHGLNISYNCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFAN VTQIEDAITLWEKLKSQKQSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL" BASE COUNT 958 a 870 c 854 g 896 t ORIGIN 1 ctgcagctca acttgcttct ccttcttctc gtagtattcc atgatcttga gacgctgctg 61 ctggaccagg cgtcccttct caatgttgaa ctcctcctcg gccttggcat cgatctcctc 121 ggctttctca ttggcctcct gactcaatga acgccatcat gtgcttgatc tgaaacagtc 181 gtcctgttta gtagttgcct gtgtgtcaca tgataactgg acatgataaa tggaaaaggg 241 agacgtccaa gaccctagcc tctatttatt ttcgttaaag ttttgataac gtaaggggtc 301 cgctggtcgt gtgacagaga gtacgagtgt ggggtgcagg gctagtcgtc tcgctccaac 361 acattgctcc aatgcggggg ccgtgtcaca tgaccagcac gaatttttac tcgacgtttt 421 acgcaaacta tctggacaaa taaattgatg tgtcttcatt agccaacaaa tatgccaaaa 481 ctccggcaac tcccaaatga ccgggccgat ttgaaggatg tcagtctaat tggactactg 541 gcggtgaaaa gttcacatga cctgggagat cccatgactt cgccatcttt attgcaaagg 601 caaattgcaa aggcaaaaag gcaaacgaag cctctcgttt tgcttgtttc cctacgacct 661 tgatcgcctg cccgttccca atccaagttt tcaattacct gcttttgtac atcagcatcg 721 ctcagtgcca ttttgactga tttttttcac tgcacaaacc gaaaggaaat tcaagtgttt 781 taaagaagcc cacgtacaac aaccgtgcct ggaaataatt gaaatttaat taagctaata 841 cattcacagc cgaactgagt tggaaacggc ggcccaacac gaggaaagtg gaaaacgata 901 agttactttt gccttctgcc caacgtctga aaattttcac tcgaaatcga tcatatgatt 961 tcacgaaagt gtgaccctgc gattgcgagg gtaaaaatgt gtatttgttg tcgctgtcag 1021 accaccgata gacgatgtaa ttgttatcgc atttgtaaca gaggcttcac tttaatcgac 1081 taggtagaaa atcatgcgat ataatctata tatgataatg aaaaatcaat ttggctcttt 1141 aaatatcatt attatattac tcgaataatc gagcgttaat ttgatacatc tgcattcccg 1201 aaatccacat taattgccag tgtgatcgga gtataataac ctgacaataa tatgatgtga 1261 caatataagc catccctgct ttattgtaag tgtatttttt aatgtacaca cgctgacgaa 1321 aagttgtgtt ttcttcggga tttcgctaag tgaaaggcct ccatttgata tttccccgca 1381 ttaaatcctc gcattcaaga gccatggaga cgctcctgga gcaacagcgg cgcctacacg 1441 aggagcgcga gcgcctggtc aaactgatgg tggacgagca tgcgaccaaa aagccgggcg 1501 aaaaggagcg catccattcg gagcaccggc ttaaatacct catggaactg catcacaact 1561 ctacgtccca gctacgcgat ctctacgagg acaaggacaa tgaacgaaag gcggagattg 1621 ccgctctttc ggggcccaac gagttcaatg agttctacgc ccgcctcaag caaatcaagc 1681 agttctacaa gtcccatccg gcggaggtca gcgtgccgct gtccgtcgag ttcgacgaga 1741 tgattcgggt gtacaacaat ccggacgaca tgagtgccct agtggagttc actgacgagg 1801 agggcggcgg tcgctatctg gacctcaacg agtgctacga gctgtacctc aacttgcggt 1861 cggtggagaa actggactat atcacttacc ttatgtcctt tgaccacgtc ttcgatattc 1921 cgagagagcg caagaaccgc gagtaccgca tatacataga gaccctcaac gactacctgc 1981 accacttcat cctccgaatc cagcccttgc tcgacctgga gggcgaactg ctaaaggtgg 2041 aacttgactt ccagcgccag tggctgatgg gcacatttcc gggtttttcg attaaggaaa 2101 ctgagtcggc gttggccaac accggcgccc accttgatct atccgccttc tccagctggg 2161 aggagctggc ctcgctagga ctggatcgtc taaagtcggc tttggtggct ctgggtctta 2221 agtgcggcgg caccctggag gagcgagcac agcgtttatt ctctaccaaa ggtaaaagca 2281 ccttggatcc cgcactgatg gccaagaagc ccagcgcaaa gactgctagt gcccagtcac 2341 gggagcacga acgccacaag gagattgccc agctagaggc tctgctctac aaatacgcgg 2401 atctgttgtc tgagcagaga gcggctacca aggagaatgt gcagagaaaa caggctcgga 2461 ctggtggcga gcgggacgat agcgatgtgg aggccagcga gtcggacaac gaagatgatc 2521 ccgacgcgga cgacgttccg tacaatccca agaacttgcc gctcggatgg gacggtaaac 2581 ctatccccta ctggttgtat aaactgcatg gcctgaatat tagctataat tgcgagatat 2641 gtggaaactt cacctacaag ggtcctaagg cttttcaacg acacttcgcc gagtggcggc 2701 atgcgcacgg catgcgatgc ctcggcattc cgaacaccgc ccatttcgcc aatgtcaccc 2761 agatcgagga cgcaatcacg ttgtgggaaa aactcaagtc gcaaaagcag agcgagcgct 2821 gggtagccga tcaggaggaa gagttcgagg actcgctggg aaacgttgtc aaccgaaaga 2881 cgttcgagga tctaaaacgc cagggtctac tttagaggac aagcctacga ttatggtcgc 2941 ttgagtaccg gtcaattcta tatgacgctt cctctaaaac ctcaacagtc tttataattc 3001 aaaacggaat gacactaaaa ttggttttat ttaaggaatc taatgttaag ccataaaacc 3061 attgggcgtc cttttattca ttaaagaaag accatggatc aacgattcat gattagaatc 3121 aattgtagtt taaaataaac ccaacgtcgt gtagttttcg ataaaatgga taacagtttt 3181 aggaatataa cattaattaa cgatgaggac atccattttc agtcccaaat catctaccct 3241 agccaaagga aggaggtaaa cggttcgccc tgtcgcttgg gattcagttt tttgggtctg 3301 aagccaggga aactcctggt actgggagtc atggctgaag cggatgaatg cctcctgggt 3361 agtgtgcaga tgcaccttaa actgacaact tccggcgggc agtttaggcg cctggtttaa 3421 gcgctgagag atttgtagat gacagagcgc atgttctgct cgaactccat caaatgatcc 3481 tctgccggta ggccactcct ctgggtttct agttgcattt tatagctctc caacttctca 3541 ttctccttct gatacactat tagctccagg cactgcag // LOCUS DMENOLAS 1302 bp DNA INV 12-SEP-1993 DEFINITION Drosophila gene for enolase (2-phospho-D-glycerate hydrolase) (EC 4.2.1.11). ACCESSION X17034 NID g7945 KEYWORDS 2-phospho-D-glycerate hydrolase; enolase. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1302) AUTHORS Bishop,J.G. TITLE Direct Submission JOURNAL Submitted (27-OCT-1989) Bishop J. G., The John Hopkins University, Department of Biology, 34th and Charles Streets, Baltimore, MD 21218, USA REFERENCE 2 (bases 1 to 1302) AUTHORS Bishop,J.G. and Corces,V.G. TITLE The nucleotide sequence of a Drosophila melanogaster enolase gene JOURNAL Nucleic Acids Res. 18 (1), 191 (1990) MEDLINE 90174924 COMMENT Author notes that no intervening sequences were found in the genomic DNA sequence. FEATURES Location/Qualifiers source 1..1302 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone_lib="lambda charon4" /chromosome="2" /map="polytene band 22A" CDS 1..1302 /note="enolase (AA 1-433)" /codon_start=1 /db_xref="PID:g7946" /db_xref="FLYBASE:FBgn0000579" /db_xref="SWISS-PROT:P15007" /translation="MTIKAIKARQIYDSRGNPTVEVDLTTELGLFRAAVPSGASTGVH EALELRDNDKANYHGKSVLKAVGHVNDTLGPELIKANLDVVDQASIDNFMIKLDGTEN KSKFGANAILGVSLAVAKAGAAKKGVPLYKHIADLAGNKEIILPVPAFNVINGGSHAG NKLAMQEFMILPTGATSFTEAMKMGSEVYHHLKNVIKAKFGLDATAVGDEGGFAPNIQ SNKEALNLISDAIAKAGYTGKIEIGMDVAASEFYKDGQYDLDFKNEKSDKSQWLPADK LANLYKEFIKDFPIVSIEDPFDQDHWEAWSNLTGCTDIQIVGDDLTVTNPKRIATAVE KKACNCLLLKVNQIGTVTESIAAHLLAKKNGWGTMVSHRSGETEDSFIGDLVVGLSTG QIKTGAPCRSERLAKYNQILRIEEEIGAGVKFAGKSFGKPQ" BASE COUNT 294 a 413 c 381 g 214 t ORIGIN 1 atgaccatca aagcgatcaa ggcccgtcaa atctacgact cccgtggcaa ccccaccgtg 61 gaggtcgacc tgaccaccga gctgggactc ttccgagccg ccgtgccctc cggcgcctcc 121 actggcgtcc acgaggccct ggagctgcgc gacaacgaca aggccaacta ccatggcaag 181 tcggtgctga aggccgtggg ccatgtgaac gacaccctgg gacccgagct gatcaaggcc 241 aatctggatg tggttgacca ggcgtccatt gacaacttca tgatcaagtt ggacggcacc 301 gagaacaaga gcaagttcgg agccaacgcc atcctgggcg tttccctggc cgtggccaag 361 gctggagccg ccaagaaggg cgtgccgctg tacaaacaca ttgccgatct ggctggcaac 421 aaggagatca tcctgccggt gcccgctttc aacgtgatca acggcggcag ccacgccggc 481 aacaagctgg ccatgcagga gttcatgatc ctgcccaccg gcgccaccag cttcacagag 541 gccatgaaga tgggctccga ggtgtaccac cacctgaaga atgtgatcaa ggccaagttc 601 ggtctggacg ccaccgctgt gggcgatgag ggcggcttcg cccccaacat ccagtccaac 661 aaggaggctc tgaacctgat cagcgatgcc atcgccaagg ccggatacac cggcaagatc 721 gagatcggca tggacgtggc cgcctccgag ttctacaagg atggccagta cgatctggac 781 ttcaagaacg agaagagcga caagtcgcag tggctgcccg ccgacaagct ggccaacctg 841 tacaaggagt ttattaagga cttccccatc gtctcgattg aggatccctt tgaccaggac 901 cactgggagg cctggtccaa cctgaccggc tgcaccgaca tccagatcgt gggcgatgat 961 ctgaccgtga ccaaccccaa gcgtattgcc accgccgtgg agaagaaggc ctgcaactgc 1021 ctgctcctga aggtcaacca gatcggcacc gtcaccgagt ccattgccgc ccatctgctg 1081 gccaagaaga acggctgggg caccatggtc tcccaccgtt ccggtgagac cgaggactcg 1141 ttcatcggtg acctggtcgt cggtctgtcc accggccaga tcaagaccgg agctccatgc 1201 cgctcggagc gtctggccaa gtacaaccag atcctgcgca tcgaggagga gatcggcgct 1261 ggcgtcaagt tcgccggcaa gtcgttcggg aagccgcagt aa // LOCUS DMESPLM4 817 bp DNA INV 30-SEP-1993 DEFINITION D.melanogaster E(spl) transcription unit m4 gene, enhancer of split locus. ACCESSION X16551 NID g7949 KEYWORDS E(spl) gene; enhancer; neurogenesis. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 817) AUTHORS Campos-Ortega,J.A. TITLE Direct Submission JOURNAL Submitted (18-SEP-1989) Campos-Ortega J.A., Institut fuer Entwicklungsphysiologie, Universitaet zu Koln, Gyrhofstrasse 17, 5000 Koln 41, FRG REFERENCE 2 (bases 1 to 817) AUTHORS Klambt,C., Knust,E., Tietze,K. and Campos-Ortega,J.A. TITLE Closely related transcripts encoded by the neurogenic gene complex enhancer of split of Drosophila melanogaster JOURNAL EMBO J. 8 (1), 203-210 (1989) MEDLINE 89231619 FEATURES Location/Qualifiers source 1..817 /organism="Drosophila melanogaster" /strain="wild type" /db_xref="taxon:7227" /clone_lib="genomic, Pirotta" /map="96F8-13, chromosome=3" gene 1..817 /note="E(spl) region transcript m4" /gene="m4" /allele="" /db_xref="FlyBase:FBgn0002629" promoter 21..27 /gene="m4" /note="TATA-box" /db_xref="FlyBase:FBgn0002629" precursor_RNA 52..>52 /gene="m4" /note="E(spl) m4 mRNA" /db_xref="FlyBase:FBgn0002629" CDS 131..589 /gene="m4" /note="E(spl) m4 peptide (AA 1-152)" /codon_start=1 /db_xref="FlyBase:FBgn0002629" /db_xref="PID:g7950" /db_xref="FLYBASE:FBgn0002629" /db_xref="SWISS-PROT:P13095" /translation="MCQNKINTNNTMTIKSNKKLSYSVKKLLQKIFKQQQRVEEEQNL KNALKANSLESLESMENSRNADLESASICASLESCENEANERLSQSCEIEDYDFEQLP TVPVHFVRTAHGTFFWTAVSDLPADNDLVEPLYCSTSNAIAIPQDRWVQA" polyA_site 749..754 /gene="m4" /note="polyA signal" /db_xref="FlyBase:FBgn0002629" BASE COUNT 248 a 243 c 148 g 178 t ORIGIN 1 tttctccacg tcctggcgag tataaaagga ccctggctcg gaggatcagg catcattcga 61 gctcaacgct tcgtacagta cacatctcag ctacacagca gctaaacaca aaattccaaa 121 acgcatcatc atgtgccaga acaagatcaa caccaacaac accatgacca tcaaatcgaa 181 caagaagctg tcctacagcg tgaagaaact gctgcagaag atcttcaagc agcagcagcg 241 cgtcgaggag gagcagaacc tcaagaacgc cctcaaggcc aactctttgg agtctctaga 301 atccatggaa aacagccgca acgccgatct ggaatccgcc tccatctgcg cctctctgga 361 gtcctgcgag aacgaggcca acgagcgtct ctcccagtcc tgcgaaattg aggactacga 421 cttcgagcaa ctgcccaccg ttcccgttca cttcgtccgc accgctcacg gcacattctt 481 ctggaccgcc gtctccgatc tgccagccga caacgacctc gtcgagcccc tctactgcag 541 cacctccaac gccatcgcta tcccccagga tcgttgggtt caggcctaag aaatatcagc 601 gtcttccatt ggatctccag ctttaatcaa cgtcttccgt taatttttga aaccattcca 661 caaaaattaa cacgcaagcc gatcaactca actgaagagc tttacaaaaa ttgtgataca 721 ttttacttaa caaacacaaa aaaatcaaaa tatatataca atttaaatga aatcaaccac 781 tgttttttta ctttaatcat tgataaatcg catgcaa // LOCUS DMESPLM5 960 bp DNA INV 30-SEP-1993 DEFINITION D.melanogaster E(spl) transcription unit m5 gene, enhancer of split. ACCESSION X16552 NID g7951 KEYWORDS E(spl) gene; enhancer; neurogenesis. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 960) AUTHORS Campos-Ortega,J.A. TITLE Direct Submission JOURNAL Submitted (18-SEP-1989) Campos-Ortega J.A., Institut fuer Entwicklungsphysiologie, Universitaet zu Koln, Gyrhofstrasse 17, 5000 Koln 41, FRG REFERENCE 2 (bases 1 to 960) AUTHORS Klambt,C., Knust,E., Tietze,K. and Campos-Ortega,J.A. TITLE Closely related transcripts encoded by the neurogenic gene complex enhancer of split of Drosophila melanogaster JOURNAL EMBO J. 8 (1), 203-210 (1989) MEDLINE 89231619 FEATURES Location/Qualifiers source 1..960 /organism="Drosophila melanogaster" /strain="wild-type" /db_xref="taxon:7227" /clone_lib="genomic, Pirotta" /map="96F8-13, chromosome=3" gene 1..960 /note="E(spl) region transcript m5" /gene="HLHm5" /allele="" /db_xref="FlyBase:FBgn0002631" promoter 7..13 /gene="HLHm5" /note="TATA-box" /db_xref="FlyBase:FBgn0002631" precursor_RNA 38..>38 /gene="HLHm5" /note="E(spl) m5 mRNA" /db_xref="FlyBase:FBgn0002631" CDS 122..658 /gene="HLHm5" /note="E(spl) m5 peptide (AA 1-178)" /codon_start=1 /db_xref="FlyBase:FBgn0002631" /db_xref="PID:g7952" /db_xref="FLYBASE:FBgn0002631" /db_xref="SWISS-PROT:P13096" /translation="MAPQSNNSTTFVSKTQHYLKVKKPLLERQRRARMNKCLDTLKTL VAEFQGDDAILRMDKAEMLEAALVFMRKQVVKQQAPVSPLPMDSFKNGYMNAVSEISR VMACTPAMSVDVGKTVMTHLGVEFQRMLQADQVQTSVTTSTPRPLSPASSGYHSDNED SQSAASPKPVEETMWRPW" misc_feature 900..906 /gene="HLHm5" /note="polyA signal" /db_xref="FlyBase:FBgn0002631" BASE COUNT 283 a 268 c 199 g 210 t ORIGIN 1 tgcgggtata aaagccggtg cagtcgagga atccagcatc attcgagcag catcctgcaa 61 gcagttcaga tcagctcagc acatttctac aaatcttcca aaacaaaaaa cacattacaa 121 aatggcacca cagagcaaca acagcaccac attcgtctcc aagacccagc actatttgaa 181 ggtgaagaag ccccttttgg agcgccagcg tcgggcccgc atgaacaagt gtttggacac 241 cttgaagacc ttggtggccg agttccaggg cgatgatgcc atcctgcgaa tggacaaggc 301 cgagatgctg gaggcggcac tcgtcttcat gcgcaaacag gtcgtcaagc agcaggcgcc 361 ggtctcccca cttcccatgg atagcttcaa gaatggctac atgaacgccg tcagcgagat 421 ctcccgtgtg atggcctgca ctccagccat gagtgtggat gtgggcaaga cagtgatgac 481 ccatctgggc gtcgagttcc agcgcatgct gcaggccgat caggtccaga cttctgttac 541 aacctccacc ccacgcccac tcagccccgc ctcctcggga taccacagcg ataacgagga 601 ctctcaatcc gccgccagcc ccaagccagt cgaagaaacc atgtggcgcc cttggtaaat 661 caccattacc atcatcatcg acatcgaatc cagtcttcca gctgaggaat ctccttcagc 721 atcgacattg aatcctgtct tccaaaagca acttctgctg caacgaatca tgtcttccaa 781 aattgaatcg ttaacaatgt gataacagct ttacctagat cataagcaca cctcaagctt 841 tattagttta ttaaggaatt tattttaaga gaacaacaca acagctttaa tagttataaa 901 atacaaaaca cacaaaaacc taaatacttt ggtctattta tttacttaaa ttaacaaaaa // LOCUS DMHBG 7680 bp DNA INV 09-APR-1998 DEFINITION Drosophila melanogaster hunchback gene encoding a finger protein. ACCESSION Y00274 NID g3046708 KEYWORDS finger protein; hunchback gene; segmentation gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 7680) AUTHORS Tautz,D., Lehmann,R., Schnuerch,H., Schuh,R., Seifert,E., Kienlin,A., Jones,K. and Jaeckle,H. TITLE Finger protein of novel structure encoded by hunchback, a second member of the gap class of Drosophila segmentation genes JOURNAL Nature 327, 383-389 (1987) REFERENCE 2 (bases 1 to 7680) AUTHORS Tautz,D. TITLE Direct Submission JOURNAL Submitted (14-MAY-1987) Tautz D., Spemannstr.35, Ab.II, Max-Planck-Institut fuer Entwicklungsbiologie, D-7400 Tuebingen REMARK Revised by [3] REFERENCE 3 (bases 1 to 7680) AUTHORS Tautz,D. TITLE Direct Submission JOURNAL Submitted (09-APR-1998) Tautz D., Universitaet Muenchen, Zoologisches Institut, Luisenstrasse 14, 80333 Muenchen, FRG COMMENT On Apr 15, 1998 this sequence version replaced gi:8054. Data kindly reviewed (20-MAY-1987) by Tautz D. Two promoters transcribe two different transcripts (3.2kb and 2.9kb transcript), but encode the same protein. FEATURES Location/Qualifiers source 1..7680 /organism="Drosophila melanogaster" /strain="Oregon-R" /db_xref="taxon:7227" /chromosome="3" /map="85A3-B1" gene 1..7680 /note="hunchback" /gene="hb" /allele="" /db_xref="FlyBase:FBgn0001180" exon 1020..1512 /gene="hb" /note="3.2kb transcript" /db_xref="FlyBase:FBgn0001180" /number=1 mRNA join(1020..1512,4666..7522) /gene="hb" /note="3.2kb transcript" /db_xref="FlyBase:FBgn0001180" /product="finger protein" intron 1513..4665 /gene="hb" /note="3.2kb transcript" /db_xref="FlyBase:FBgn0001180" /number=1 mRNA join(4238..4382,4666..7522) /gene="hb" /note="2.9kb transcript" /db_xref="FlyBase:FBgn0001180" /product="finger protein" intron 4383..4665 /gene="hb" /note="2.9kb transcript" /db_xref="FlyBase:FBgn0001180" /number=1 exon 4666..7522 /gene="hb" /note="3.2kb and 2.9kb transcript" /db_xref="FlyBase:FBgn0001180" /number=2 CDS 4684..6960 /gene="hb" /codon_start=1 /db_xref="FlyBase:FBgn0001180" /product="finger protein" /db_xref="PID:e1286741" /db_xref="PID:g3046709" /translation="MQNWETTATTNYEQHNAWYNSMFAANIKQEPGHHLDGNSVASSP RQSPIPSTNHLEQFLKQQQQQLQQQPMDTLCAMTPSPSQNDQNSLQHYDANLQQQLLQ QQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPTSAST IAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSNIEPEKEHDQMSNSSEDMKYMAE SEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPF VTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYAT KYCHSFKLHLRKYGHKPGMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSG SRKSNVAAVAPQQQQSQPAQPVATSQLSAALQGFPLVQGNSAPPAASPVLPLPASPAK SVASVEQTPSLPSPANLLPPLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSP RMREQLQQQNQQQSDNEEEEQDDEYERKSVDSAMDLSQGTPVKEDEQQQQPQQPLAMN LKVEEEATPLMSSSNASRRKGRVLKLDTLLQLRSEAMTSPEQLKVPSTPMPTASSPIA GRKPMPEEHCSGTSSADESMETAHVPQANTSASSTASSSGNSSNASSNSNGNSSSNSS SNGTTSAVAAPPSGTPAAAGAIYECKYCDIFFKDAVLYTIHMGYHSCDDVFKCNMCGE KCDGPVGLFVHMARNAHS" misc_feature 5401..5712 /gene="hb" /note="finger domain 1" /db_xref="FlyBase:FBgn0001180" misc_feature 6796..6954 /gene="hb" /note="finger domain 2" /db_xref="FlyBase:FBgn0001180" polyA_signal 7326..7331 /gene="hb" /note="putative" /db_xref="FlyBase:FBgn0001180" polyA_signal 7500..7505 /gene="hb" /note="putative" /db_xref="FlyBase:FBgn0001180" polyA_site 7522 /gene="hb" /db_xref="FlyBase:FBgn0001180" BASE COUNT 2240 a 1893 c 1549 g 1998 t ORIGIN 1 catacaaata ataagttatc cttttgtatt gtatagagaa aaaaaggttt ttaccaatga 61 actatgaata atgaataata ataatagttt ttttttttag tccaaaattt gtcattaaac 121 ctagttagaa caatcgctcc taatttatca ttctaaaagc gaacattccg cttgggaaaa 181 aaattggtct aaaccgaatg atactattaa tgatatgcat ttattgctaa ccataatcct 241 tgtcaagcta acaatgatac attttccgaa attagcttaa aaaggtggaa tacacccaat 301 atgcacaaac taccttaagg agatttggaa tttcgaatgc taattgtggc aaagctttgc 361 ccaaattaag ttaacacgca cagcaacagg aaaatgtgtt aaagcaacaa ggaatctcct 421 cggcccaaac ttccatcgtc ccaattgcag ttggctaagt tgttaatgtg tctgggctta 481 aagttgccca aaaaacaatt ggcgaaggcc ccccatcttc ctccatttcc gctctctcac 541 ttttgggcca gaaatcaata atcaatagtg aagcggagat gccaaaaaac ggcaaagagc 601 caaaaaggca gctgcattcg gccaaaatgc agcgccagaa aatgcaaaag gataaaatga 661 gcgagtcaga gcgagagagt gggtgagtga gtgaaagagc gaacgccacg aaggggatgc 721 tgtttagtta ttgcttttgg ggatggggaa agtcactcag atttacagct agcatccgta 781 tccgttttga gtgagtttcg tcgttacgtt gttgatgctc tccggctgct ctctcatttc 841 gatttctgct tctccgtgta acggctctcg tgcgcctttg tgttgttgca cttctggcat 901 ttgtttttgc tttgcaattg agattttaga tttgagttct tttttggcga gtgcactgtt 961 gtgaggagca gtgaggagat tttcagctat tagaagagcc cgctgagcgt gagtttggtc 1021 agttgtgctc cgagtcccga aaacgaaagt cgccagcatt gacaggcagc cacggaaata 1081 caaaaataac caaacatcca aaggacgaaa cgtaactgct atcaaaacaa atattgccat 1141 taaatacaat taaacttcgt gcttgtgcta aaagataacc aattgcaaaa agacttttgt 1201 cccgaaaact tattttttgg caaagaccac atcccgcaca tgcgcgaatt ccgcgaaaaa 1261 gaaagcacaa aagcaagcta aaaagcgagg cccaaaaaat agacaaaaac gaagagcaag 1321 gagcccccac atcgccgctc cccctcgcac gcactgtgcg tgttggtcta acggtaaccg 1381 tgccgcggtc aagcgagaga gtgggaaaga gagagtccgc gagcgaaaag cgaaaactta 1441 cgtgctcctg ctcctgctcc cggttcccgt ttccaaattc tcccgcagaa ttgcacttgg 1501 actgtccgca aggtaagtaa ctgggcgtac catccaatat cctagttata cactgcattc 1561 gacctccaat aaatcgtaaa aaacacatgg aggtagaaat tcgcaaaagc tttccgcgga 1621 taaacaaata aacaagaatt acaaatcgct tttgcgggag caaatgccaa aatgttgggg 1681 tatccagaat atacacagtt tttgtgagga tttacatacg ccctgtaaat tttaatttag 1741 ttctcaattg atacgaaatc tgtttttttt tatagaatat attcgatata tagttgttta 1801 attataattc atcatgtgat atactttcaa aagaaacaga tttaaatagt tcgtttatat 1861 gctattatgc actatgctta atgtatttta ctttattaat tcatgctaat ctgatgactg 1921 ataaccaatt tgcttattct atgtcataat cacctttaat cccaagtact caactttctt 1981 ctagttctgc acattttctt gttctcttct tgttgtttgt aatcgagtgc ttctttttct 2041 gtctaacctt aggaacacaa acaagagatc tcacacacat gcacacacac aaccacacag 2101 agtggtaaat cattgctaaa aatgcaaatg gcaaaaattc taaaacaata ttttaaaatc 2161 tgtctggctt ttggccgatc ttcgggtgaa cttgtttttt gcccgctctg tctgtttttg 2221 cctagaactg cagcgtatat ccaaccccca accgaccccc ccccctcctc atttgctcct 2281 cctaagcaac gcccctggcc acgcccccct ctacgcctga cagctaattt tatttgttta 2341 catgtcgact ttcatgttgt ttttttttcg ccttcctgcc ccccaaataa ccccttcaat 2401 ttttagcatt tcttttcgct cttctttcgg caaatgcatt ttcgactttt cttttttaat 2461 aatttaaatt tagacatcga actataattc aaagtcaacg tggcaatttt ttaatggcaa 2521 atagttcggc acttgccaaa atgcatttca aatataatga atacacctat gtgacgctcg 2581 caggctttgt tttttttttt tgtttaggat gatgatggga atcattattg cacgatcttt 2641 tgcagaattg attgtcatcc gacagtttta atgtttgccg acaaaaagaa ctgagcgcat 2701 ttcaaacaaa tggggctttg ttaggcgcat aaaaataaat atgcacatat tatacgggat 2761 atatttataa accgcaaatg acattgaatc acttcagtca gcagcagcag tgcagttttc 2821 cctaaacgaa tgcagctcca aaaaacaaca agttgttcta agccaacaac ataacggttg 2881 caactacaca tatgtatacg catacataca tatattttat atacgcctgc aaacaagcag 2941 gcatatcctg ctcttggctt gctttttgta cggatttttc aacaaaaaca ttttttgtgt 3001 ggcgcatttt ctgcgttttc gaatttttcc atttttgcca ttttcatgat atttttagag 3061 ggttaaaaag ggggcggtgt tggggtgggg ggggaggcac caaaaacgac tagcacatgt 3121 ttagtttact tttgcagttt cggttgcctg gctgcactcg ttgtggccac accacgccac 3181 taacccccac tgcatggtcc ccatgccccc acccctgccc ccttggccca tgcccctgcc 3241 cggcgtaata ttaattttac acttggcctt tagtttggct ttgttgctgt tgttgggcat 3301 ggcacaaaaa agcccagacg aaaggcgaaa attctctttg tttcatagtg cgcacacaca 3361 ctaacacact tgccgagcaa ttaattttgg ctttctttaa aaatatccac aaaagcgaat 3421 ttaaataaat atgctaagct tcattttgtg tggtgcactt tctgtttcct gaaccatcaa 3481 ttatgcctaa gtattgtaga tattttagct gccagatagc acagcaccat cctcccataa 3541 taatattccg taaatgcccc tttttcccgt tttgcgtttt taataatatt tacttgaaag 3601 cacaaacaat tagccaaaaa tgcagcaact gcacaatttt tcagtgtgaa attggaaatg 3661 gaaaaaatat aggcaacaag caattttaat gcgagaatta ttagaaaaac tacgcaaatc 3721 aaagtgaaat gtctggcgga aaattgttgt caggaaaatg tttttcaaat gggtgtgtaa 3781 taattatact gcacatatta tgcatatagt ttagttggtc cttagagttt tcccgcaggt 3841 gtaagcagtt ctgatccgtt aatttagtta agtcccgcaa tcctttttac tttttattat 3901 taactacgaa actgcccacg ctagctgcct actcctgctg tcgactcctg accaacgtaa 3961 tccccataga aaaccggtgg aaaattcgca gctcgctgct aagctggcca tccgctaagc 4021 tcccggatca tccaaatcca agtgcgcata attttttgtt tctgctctaa tccagaatgg 4081 atcaagagcg caatcctcaa tccgcgatcc gtgatcctcg attcccgacc gatccgcgac 4141 ctgtacctga cttcccgtca cctctgccca tctaatccct tgacgcgtgc atccgtctac 4201 ctgagcgata tataaactaa tgcctgttgc aattgttcag tcagtcacga gtttgttacc 4261 actgcgacaa cacaacagaa gcagcaccaa taatatactt gcaaatcctt acgaaaatcc 4321 cgacaaattt ggaatatact tcgatacaat cgcaatcata cgcactgagc ggccacgaaa 4381 cggtaggata ttgttagcca ttaccaagtg tctccatttt gaacacaaaa tcactcaaat 4441 cgccttcagg gggtgggtgc cgcccagcca cccctgacgt attttttgtt aggggtggtg 4501 ccgcaagcac accaaaaaaa gagaaaaaaa aaataaaagc gaggaaaaat aaaatgaaaa 4561 acaagcggaa aaaaagagga aaaaactcga cgcaggcgca gtgcatgaat gaataaatga 4621 atatgcccac taaccccact ctctctgttt tcttatccat tacagccgtc tagagccgcc 4681 aagatgcaga actgggagac gacagccacg accaactacg agcagcacaa cgcctggtac 4741 aacagcatgt tcgcggcaaa tatcaaacag gagccaggtc atcatctcga cgggaatagc 4801 gtggccagca gtccgcgcca atcgcccatt ccctcgacca atcacctgga acagttcctc 4861 aagcagcagc agcagcagct tcagcagcaa cccatggata ccctgtgcgc catgacccca 4921 tcacccagcc aaaacgatca aaacagcctg cagcattacg atgctaactt gcagcaacag 4981 ttgctgcagc aacagcagta ccagcagcat ttccaggcag cccagcagca acatcatcac 5041 catcaccatc tgatgggtgg attcaatccg ctgacgccac ctggtctgcc caatcccatg 5101 cagcacttct atggcggcaa tctgcgaccc agtccgcagc ccacgcccac atctgcctcc 5161 acaattgcgc ccgttgcagt tgccactggc agcagcgaga agttgcaggc actaacacca 5221 cccatggatg tcacaccgcc taagtcgccg gccaagtcga gtcagtcgaa tattgagccg 5281 gagaaggagc acgatcagat gtcgaactcc agcgaggaca tgaagtacat ggccgagtcc 5341 gaggacgatg ataccaacat ccggatgccc atctacaatt cgcacggcaa gatgaagaac 5401 tacaagtgca agacctgcgg cgtggtggcc atcaccaagg tggacttctg ggcgcacacc 5461 cgcacccaca tgaaaccaga caagatcctg cagtgcccga agtgcccgtt cgtcaccgag 5521 ttcaagcacc acttggagta ccatatccgg aagcacaaga accaaaagcc cttccagtgc 5581 gacaaatgca gctacacgtg tgtcaacaaa tccatgctaa actcgcaccg caagtcgcac 5641 agttctgtgt atcagtaccg ttgtgcggat tgtgattacg ccaccaagta ttgccacagc 5701 ttcaagctgc atctgcgcaa gtatggtcac aagcccggca tggttttgga cgaggatggc 5761 accccgaatc cctcgttggt catcgatgtt tacggcacgc gtcgtggtcc gaagagcaag 5821 aatggtggac cgattgccag tggaggaagt ggcagcggca gccggaagtc aaatgttgca 5881 gctgtcgctc cgcagcaaca gcaatctcag ccagctcagc cagtcgccac atctcagctg 5941 agtgccgccc tgcaaggatt ccctctggtt caaggcaact ccgctcctcc ggcggcatct 6001 ccagtgctcc cgctgcccgc ctctcctgcc aagagtgtgg ccagtgtgga acagacgccc 6061 agcttgccca gtccagccaa tcttctgcct cctctggcca gccttctgca gcagaaccgc 6121 aacatggcct tcttccccta ctggaacctc aatctccaga tgctggccgc ccaacaacag 6181 gccgctgtct tggcccaatt gtcgccaaga atgcgagagc aactgcagca acagaaccag 6241 cagcagagcg acaatgagga ggaggagcag gacgatgagt acgagcgtaa gtcagtggac 6301 tctgccatgg atctgtccca aggaacgcca gtgaaggagg atgagcagca gcaacaaccg 6361 cagcagccgc tggccatgaa tctcaaggtg gaggaggagg ccacgcctct gatgagcagc 6421 tcgaatgcct cgagacgcaa gggacgcgtc ctcaagctgg acaccctgtt acaactgcga 6481 tcggaggcca tgacatctcc cgagcaactg aaagtaccca gcacacccat gccaactgca 6541 tcctcgccca ttgccggacg caaacccatg cccgaggagc actgctcggg caccagttcg 6601 gcagatgagt cgatggagac ggcccatgtg ccgcaggcca ataccagtgc cagttcgacg 6661 gcgtccagct cggggaacag ctccaatgcc agcagcaata gcaacggcaa cagcagcagc 6721 aattccagca gcaatggaac cacctcagcg gttgcagctc ctccatccgg aactccggcg 6781 gcggcgggtg ccatctacga gtgcaagtac tgtgatatct tcttcaagga cgccgtgctc 6841 tacaccattc acatgggcta ccacagctgc gacgatgtgt tcaagtgcaa catgtgcggc 6901 gagaagtgcg acggacccgt cggcctcttc gttcacatgg ccaggaatgc tcactcctaa 6961 gttccccatc accatcacct tgttattatt atttatcact attatcatat aatcgttgtc 7021 cagaattgta tatattcgta gcataagttt tccaaacatt attttgttgt cgaaaattgt 7081 acataagcca attaagccgc taattctaga cctaagttta tctaactatc ctaactgtat 7141 tgaactgtag ccacctttca atctgtctcc tatacactct tgtattttcg aaatcgacta 7201 aaaaccctga aaacggttta aaaactatca taaatgcatg gagaaacata agcctaagtt 7261 aaatctaatt tgtaagttga gtcaagcgaa acaaccaaac aataccaaca gtccaaagtc 7321 aaattaataa aatatagttt ataacatata cataatgagt atgttttcta aaataattaa 7381 ttagtcttat ttaacctaac atattcgtat atgcgcataa cactcagttc tttctctgat 7441 attattctct cagtattttg ttagttgaaa gcgaattcga atcgaacgaa atcaaatcaa 7501 ataaatccaa ttattcaata taatttcaca agtttttcgc tttttttttt gttgttaacc 7561 ttttggccaa taatgacaat attttcgatg caactgaaac tgacgaaaga agaagtacaa 7621 atttagagat ttttaaagag tagctaagat gcgcgaaatc tgagcaacgg atcaaattag // LOCUS DMHETA1 2777 bp DNA INV 16-JUN-1994 DEFINITION D.melanogaster Het-A transposable element 17B3 gene for ga-like protein. ACCESSION X77049 NID g443788 KEYWORDS gag-like protein; transposable element 17B3. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2777) AUTHORS Biessmann,H., Kasravi,B., Bui,T., Fujiwara,G., Champion,L.E. and Mason,J.M. TITLE Comparison of two active HeT-A retroposons of Drosophila melanogaster JOURNAL Chromosoma 103 (2), 90-98 (1994) MEDLINE 94333070 REFERENCE 2 (bases 1 to 2777) AUTHORS Biessmann,H. TITLE Direct Submission JOURNAL Submitted (31-DEC-1993) H. Biessmann, Developmental Biology Center, Univ. of California, Irvine, Ca 92717, USA FEATURES Location/Qualifiers source 1..2777 /organism="Drosophila melanogaster" /note="telomere" /db_xref="taxon:7227" /dev_stage="adult" CDS 1..1344 /note="HeT-A transposable element 17B3ele1" /codon_start=1 /product="gag-like polypeptide" /db_xref="PID:g443789" /db_xref="FLYBASE:FBgn0004141" /translation="MSTSDNLFSDDEVLAISSSPEQRSSPFYLNISPMSHGSDNSQIN TIIINQKQLSSSQANKSPKNSSEAAIKIVNSLSHKGKEKTNTNNAQKDPLSLTNTVAA TVGAKSSITKGKLPSPPSTSHTFKGKLLPKMTHTNAAAATNTDAELKSAKLSDALGNF PSLSYSDGSINLSSSTKIGCNKISPLPYAHTNTSKATNISVESRSKCSALVNSNASSK KANASDSGEILSSQIQIDKHKQEERPSTTLNAFWSIFNPKPDVSKLSLNRKLTNRNAN IGKRSISPHKRNTSLRHSAQRDLNSKPNSSAMPTVGNLSATRTLSRPAAKRDLFKSPS KSPDEQPMSFSEVVAGTDTNFVASPDPTPQSKTPGKRTNDELDSSRFKTPNKRICATT NFETPNIFPPLITPVFKSKAAQSVYEESKARNGPPRQPLPCSINASARSAARHPV" BASE COUNT 932 a 762 c 522 g 561 t ORIGIN 1 atgtccacgt ccgacaacct tttttctgac gatgaggttc ttgcaatttc atcaagccca 61 gagcagagat catccccctt ctatcttaat atatcgccca tgtcccacgg atctgacaat 121 tctcagatta atacaatcat tattaatcag aagcaattgt cctctagcca agcaaataaa 181 agtccaaaaa actcttcaga ggctgccata aaaattgtta attccctttc acataagggg 241 aaagagaaga caaacaccaa taatgcccaa aaagaccccc tctcgctcac taatactgtt 301 gcagccactg ttggcgccaa aagcagcatc acgaagggga aattgccttc tcctccatcc 361 acctcacaca catttaaggg gaaattactc ccaaaaatga cccacactaa tgcagctgca 421 gccactaata cggatgcaga attaaaaagc gccaaactaa gcgacgcttt gggaaatttc 481 ccctccctct catatagcga tggtagcatt aatcttagct cttctaccaa aatcggatgc 541 aataaaattt cccctcttcc ttatgcacat actaacacaa gcaaggccac aaacataagc 601 gtagaaagcc gctcaaaatg ttccgcgctt gttaattcta acgcaagctc caaaaaagct 661 aatgctagtg acagtgggga aattctctcc tcacaaatac aaattgacaa acataagcaa 721 gaggaaaggc caagcactac tcttaacgct ttttggtcta ttttcaaccc caagccggac 781 gtttcaaaac ttagtttaaa taggaaactc accaatcgca atgcaaatat tgggaaaaga 841 agtatttccc ctcacaaaag aaatacttct ttacgccatt ctgctcagcg cgatttaaat 901 tcaaagccca actctagcgc catgcccact gtggggaatt tatctgcaac ccgcacacta 961 agccggcctg cagccaagcg ggatttattt aaatcaccct ccaaaagccc tgacgagcag 1021 cctatgagtt tttcggaagt ggttgctgga acggatacaa attttgtggc atcccctgat 1081 ccgacaccac aatctaaaac tccaggcaag cggacaaatg acgaactaga cagctcaagg 1141 ttcaagacac ccaacaaaag aatatgtgcg acaacaaact ttgaaactcc taacattttt 1201 cctcccctca ttacacccgt ttttaaaagc aaggcagcac aatctgttta tgaggaatcc 1261 aaagccagga atggaccccc ccgccagccg ttaccctgca gcatcaatgc ctctgctcgc 1321 agcgcagcgc gccacccggt ttagcccccc ccctaccccc tcaaaactca gattcagaac 1381 tgcctccttg gaaaatcgtg ccacaaagtc gcagagcacc cccaataatc gtcaataatg 1441 taaaagaaat agtcccgctc ctggaaaaac caaattacac agcaggagta tccagttaca 1501 ccaccagagc aatagatggg aatggggtca ggatccaggc caaggatatg accgccttca 1561 acaaaattaa agaagtcctg gtggccaatg gcttccctct atttaccaac cagcccaagt 1621 ccgagagagg cttccgagta gtcatcagac acctccacca ctccactcca tgctcgtgga 1681 tagtcgagga gctaaggaag ctcggattcc aagcgcgctt tgtcagaaac atgacgaatc 1741 cggctacagg tggccccatg cgaatgtttg aagtggagat cgtcatggcc aaagatggca 1801 gccatgataa aattctctca ctcaaacaaa tcggtgggca aagggtggat atagaaagga 1861 aaaacaggac acgggagccg gtccaatgct acagatgcca gggcttcagg catgccaaaa 1921 actcttgcat gaggccgcca agatgcatga aatgcgctgg cgatcacctg tcatcctgtt 1981 gcactaagcc aagatccacc cctgccacct gcatcaactg ctctggagag cacattagtg 2041 cttacaaggg atgccccgtt tataaggccg aaaaacaaaa gattgcagca aacaacattg 2101 acataaataa aatacggaca attaaagacg caacaacaaa catttacaga cgtcaaggtc 2161 ctcctccacg caataacacc cctcggctac cacatagctc agcaatcctg agcaaatcaa 2221 tcgctgaagc tcgccaggag gcagccagaa aatctatgct aaaccccttc cggccaaata 2281 tgaacgacgt aaggccacgt ttttcctccc atgacactgc catccagaag cggctgaaaa 2341 aatggcgtcg aaacactaac aaaataccca aaaagggtag aacagtctca aagaacaatg 2401 taaagccgcg accaataacc aagacaagca acccagcgca aagacatctg gaaaacttcc 2461 aggacaagct ccgaaaagaa aggagcgaag taaaggacca ggaacctgaa aaaggtaccc 2521 caaatccaat gcaagtcaac aatgacagcc ctccgaccac cagcagagcc gccagagcaa 2581 gctttaaacc tagagtcatt gacgaaaaca cgcctttgcc aagaaattcc aacctatatc 2641 tacaaaaaag cttttcggac gaccccgcca ctaacctagc aaatagagta gataacttag 2701 agcaaaaaat tgacatttta atggcgctaa tcatacaagg aaggactaac aacactgaca 2761 tggatacatc cacttaa // LOCUS DMHISH1 944 bp DNA INV 12-SEP-1993 DEFINITION Drosophila melanogaster H1 histone gene. ACCESSION X04073 NID g8064 KEYWORDS histone; histone H1. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 944) AUTHORS Murphy,T.J. and Blumenfeld,M. TITLE Nucleotide sequence of a Drosophila melanogaster H1 histone gene JOURNAL Nucleic Acids Res. 14 (13), 5563 (1986) MEDLINE 86286566 FEATURES Location/Qualifiers source 1..944 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..944 /note="Histone H1" /gene="His1" /allele="" /db_xref="FlyBase:FBgn0001195" misc_feature 67..71 /gene="His1" /note="put. transcription start region" /db_xref="FlyBase:FBgn0001195" CDS 106..876 /gene="His1" /note="put. histone H1 (aa 1-256)" /codon_start=1 /db_xref="FlyBase:FBgn0001195" /db_xref="PID:g8065" /db_xref="FLYBASE:FBgn0001195" /db_xref="SWISS-PROT:P02255" /translation="MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATP SHPPTQQMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVNGK LIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKIGVSSKKTAVG AADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSKPAATKAKVTAAKPKAVVA KASKAKPAVSAKPKKTVKKASVSATAKKPKAKTTAAKK" BASE COUNT 326 a 202 c 227 g 189 t ORIGIN 1 agtgttaaag tgctctcctc ctcgattctc atcagagcaa aggaggttgg taggcagcgc 61 gcgagccatt tttaacagaa aaaaagtgtt ctcagtgaaa aaaagatgtc tgattctgca 121 gttgcaacgt ccgcttcccc agtggctgcc ccaccagcga cagttgagaa gaaagtggtc 181 caaaaaaagg catctggatc tgctggcaca aaggcaaaga aagcctctgc gacgccgtca 241 catccgccaa ctcagcaaat ggtggacgct tccattaaaa atttaaagga acgtggcggt 301 tcatcacttc tggcaatcaa aaaatatatc actgccactt ataaatgcga cgcccaaaag 361 ttagcgccat tcatcaagaa gtacttaaaa tcggccgtgg tcaatggaaa gcttattcaa 421 actaagggaa agggtgcatc tggatctttc aaactgtcgg cctctgccaa gaaggaaaag 481 gatccgaagg caaagtcgaa ggttttgtct gctgagaaaa aagttcaaag caagaaggta 541 gcctctaaga agattggtgt ctcctccaaa aaaactgccg ttggggctgc tgacaaaaag 601 cccaaagcta agaaggctgt ggctaccaaa aagactgccg aaaataagaa aactgagaag 661 gcaaaagcca aggatgccaa gaaaactgga atcataaagt cgaagcccgc cgcaacaaag 721 gcgaaagtga ctgcagcgaa gccaaaggct gtagtagcga aagcgtcaaa ggcaaagcca 781 gcggtgtctg caaaacccaa aaagacggtg aagaaagcat cggtttctgc taccgccaag 841 aagccgaaag cgaagactac ggctgccaaa aagtaaattg tgaaaaagtg cagtatttgg 901 tacatgttcg caattaaaat tttagattta tgatttatag atct // LOCUS DMHLHMB 671 bp DNA INV 07-OCT-1997 DEFINITION D.melanogaster gene E(Spl)-HLH-mbeta for helix-loop-helix-protein. ACCESSION X67047 S48223 NID g8075 KEYWORDS helix-loop-helix protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 671) AUTHORS Knust,E. TITLE Direct Submission JOURNAL Submitted (22-JUN-1992) E. Knust, Institut f. Entwicklungsbiologie, Universitaet Koeln, Gyrhofstr. 17, 5000 Koeln 41, FRG REFERENCE 2 (bases 1 to 671) AUTHORS Knust,E., Schrons,H., Grawe,F. and Campos-Ortega,J.A. TITLE Seven genes of the Enhancer of split complex of Drosophila melanogaster encode helix-loop-helix proteins JOURNAL Genetics 132 (2), 505-518 (1992) MEDLINE 93051287 FEATURES Location/Qualifiers source 1..671 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /germline /clone_lib="Girrotta, genomic" /chromosome="III" /map="96F 8-13" gene 28..615 /note="E(spl) region transcript m&bgr" /gene="HLHm&bgr;" /allele="" /db_xref="FlyBase:FBgn0002733" CDS 28..615 /gene="HLHm" /note="E(Spl) HLH-Mbeta" /codon_start=1 /db_xref="PID:g8076" /db_xref="FLYBASE:FBgn0002733" /db_xref="SWISS-PROT:Q01906" /translation="MVLEMEMSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECL TQEGEHITRLEKADILELTVEHMKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAG YVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVVPSLPIGVPLQAPVEDQA MVTPPPSECGSLESGACSPAPSEASSTSGPMWRPW" BASE COUNT 158 a 194 c 190 g 129 t ORIGIN 1 aaaaaaacaa aaccaaacta caacaaaatg gttctggaaa tggagatgtc caagacctat 61 cagtaccgca aggtgatgaa gcccatgctg gagcgtaagc gccgtgccag gattaacaag 121 tgcctggacg agctcaagga catcatggtg gagtgcctga cccaggaggg cgagcacatc 181 acccggctgg agaaggccga catcctggag ctgaccgtgg agcacatgaa gaagctgcgt 241 gcccagaagc agctgcgtct gtccagcgtc accggtggag tgtctccgag tgccgatccc 301 aagcttagca tcgctgagag tttccgtgcg ggctacgttc atgctgccaa tgaagtgtcc 361 aaaaccttgg ccgctgtacc cggagtgagt gtggatctcg gcacccagct gatgagtcac 421 cttggccatc gtctcaacta cctgcaagtg gtggttccct cgctgcccat cggagtgcct 481 cttcaagctc cagtagagga tcaagctatg gtcactccac caccctctga atgcggcagc 541 ttggagagcg gagcctgcag cccggcgccc agcgaggcca gctccacctc tggccccatg 601 tggcgtccct ggtgatcaac tggactccgg atgatattca cctgaattcg ccttcaagcg 661 gaaggcttat a // LOCUS DMHOBOG 3016 bp DNA INV 13-NOV-1996 DEFINITION Drosophila transposable element hobo 108. ACCESSION X04705 NID g8086 KEYWORDS transposable element. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3016) AUTHORS Streck,R.D., MacGaffey,J.E. and Beckendorf,S.K. TITLE The structure of hobo transposable elements and their insertion JOURNAL EMBO J. 5, 3615-3623 (1986) FEATURES Location/Qualifiers source 1..3016 /organism="Drosophila melanogaster" /transposon="hobo 108" /db_xref="taxon:7227" gene 1..3016 /note="hobo element" /gene="hobo" /allele="" /db_xref="FlyBase:FBgn0001210" repeat_region 1..12 /note="left terminal repeat" CAAT_signal 46..54 /gene="hobo" /note="putative" /db_xref="FlyBase:FBgn0001210" TATA_signal 107..113 /gene="hobo" /note="putative" /db_xref="FlyBase:FBgn0001210" misc_feature 208..210 /gene="hobo" /note="pot. translation start codon" /db_xref="FlyBase:FBgn0001210" misc_feature 247..249 /gene="hobo" /note="pot. translation start codon" /db_xref="FlyBase:FBgn0001210" repeat_region 249..288 /note="L repeat" misc_feature 304..306 /gene="hobo" /note="pot. translation stop codon" /db_xref="FlyBase:FBgn0001210" CDS 316..2250 /gene="hobo" /note="put. ORF 1" /codon_start=1 /db_xref="FlyBase:FBgn0001210" /db_xref="PID:g8087" /db_xref="FLYBASE:FBgn0001210" /db_xref="SWISS-PROT:P12258" /translation="MAPYIMIVEFLCLWSSVSAVNCPFFVFYDAITSLLGFSIIWKPK EKVTIMAEAADFVKNKINNGTYSVANKHKGKSVIWSILCDILKEDETVLDGWLFCRQC QKVLKFLHKNTSNLSRHKCCLTLRRPTELKIVSENDKKVAIEKCTQWVVQDCRPFSAV TGAGFKNLVKFFLQIGAIYGEQVDVDDLLPDPTTLSRKAKSDAEEKRSLISSEIKKAV DSGRASATVDMWTDQYVQRNFLGITFHYEKEFKLCDMILGLKSMNFQKSTAENILMKI KGLFSEFNVENIDNVKFVTDRGANIKKALEGNTRLNCSSHLLSNVLEKSFNEANELKK IVKSCKKIVKYCKKSNLQHTLETTLKSACPTRWNSNYKMMKSILDNWRSVDKILGEAD IHVDFNKSSLKVVVDILGDFERIFKKLQTSSSPSICFVLPSISKILELCEPNILDLSA AALLKERILENIRKIWMANLSIWHKAAFFLYPPAAHLQEEDILEIKVFCISQIQVPIS YTLSLESTETPRTPETPETPETPETPETPETPETPETPETPESLESPNLFPKKNKTIS SENEFFFPKPVTESNSNFNESPLDEIERYIRQRVPLSQNFEVIEWWKNNANLYPQLSK LALKLLSIPASSAELKECFP" misc_feature 1018..1025 /gene="hobo" /note="internal insertion site" /db_xref="FlyBase:FBgn0001210" repeat_region 1849..1983 /note="S repeat" misc_feature 2261..2265 /gene="hobo" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0001210" misc_feature 2448..2452 /gene="hobo" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0001210" repeat_region 2771..2786 /note="internal copy of terminal repeat" repeat_region 2999..3016 /note="right terminal repeat" BASE COUNT 1019 a 561 c 578 g 858 t ORIGIN 1 cagagaactg caagggtggc acttttttac cactcgactc acaccctaca attttgtgtg 61 cgggtgctac tcgccacgca catcgcgggt acttacaaac acacagtata aatctgaaca 121 tgcagacaag acaccccgtt gtgtgcgcac ccgaatcaat acggtgtttt gcgtcgcggg 181 tgccgctcac acagtgccta aaaagggatg agtgagaaaa acacttgtgg gtataccgtt 241 aaacacatgg gtgtttccaa aaatactcgg gtgtttccaa aaatactcga gtggtctcgt 301 aggtagtcga gtcaaatggc gccatacata atgattgttg agttcttgtg tctttggtcc 361 agtgtctcgg ctgttaattg cccctttttt gttttttacg atgcaattac tagcttgtta 421 ggattcagta ttatttggaa gccaaaggaa aaggtcacaa taatggcaga agcggctgat 481 ttcgttaaaa ataaaattaa caatggaaca tactcagttg ccaataaaca taaagggaaa 541 agtgttattt ggagcatttt atgtgacatt ttaaaggaag atgaaactgt tctggacgga 601 tggctgttct gcaggcaatg ccagaaagtg ctcaaatttt tacacaaaaa cacctccaat 661 ttatcccgcc ataaatgttg tctaacatta agacgaccaa cggaattaaa aattgtttcg 721 gaaaacgaca agaaagtagc tattgaaaaa tgcacccaat gggttgtcca agattgtcgg 781 ccgttttctg cagtaaccgg agccggattt aaaaatttgg tgaagttttt cctacaaatc 841 ggcgctatct atggggaaca ggtagacgtc gatgacttac tacctgatcc aacaacatta 901 agtcggaagg ccaaatcgga tgcagaagag aagaggagtc taatctcgtc cgagataaaa 961 aaagctgtgg atagcggaag agcaagtgcg accgtcgaca tgtggactga ccagtatgtc 1021 caaagaaact ttttgggcat cactttccat tacgaaaaag aatttaaact ttgtgacatg 1081 attttgggac taaaatcgat gaattttcaa aaatcgactg ccgaaaacat tttaatgaaa 1141 attaaaggtt tattttcgga attcaatgtt gagaacattg ataatgttaa gtttgtgact 1201 gacaggggag caaatataaa aaaggcttta gagggcaata cccgtttaaa ttgtagcagt 1261 cacctgttgt caaatgtttt agaaaaatcg tttaacgagg ccaatgaact caaaaaaatt 1321 gtgaaatcat gcaaaaaaat cgtgaagtac tgcaaaaaat caaatttgca gcatactcta 1381 gaaaccactt tgaaaagcgc ctgtccgact agatggaact ccaactacaa aatgatgaag 1441 tccattctgg ataactggcg tagtgtggat aaaatattag gtgaagctga tatccatgta 1501 gattttaata aatcatcttt aaaagttgtg gtagatattc taggagactt tgaacgaata 1561 tttaagaagt tgcaaacatc tagctcacca tctatatgct tcgtattgcc atccatctct 1621 aaaattttag aattatgcga gccgaatatt ttagaccttt ctgcagcagc attgcttaag 1681 gaaagaattt tggaaaatat tcgtaagatt tggatggcaa atctaagcat atggcataag 1741 gcggcatttt ttttatatcc acccgcagca catcttcagg aagaagatat tcttgaaata 1801 aaggtgtttt gcatttcaca aattcaagtc ccaatttcat acacattaag cttagaatct 1861 acagaaactc caagaactcc agaaactcca gaaactccag aaactccaga aactccagaa 1921 actccagaaa ctccagaaac tccagaaact ccagaaactc cagaaagtct agaaagtcca 1981 aacttatttc caaaaaaaaa caaaacaata tcttctgaaa acgaattctt cttcccaaag 2041 ccagtaactg agtctaattc caacttcaat gaatctccat tagatgaaat tgaacgatat 2101 attagacaaa gagttccatt gtctcaaaat tttgaagtaa ttgagtggtg gaaaaataac 2161 gcaaacttat accctcagtt gtcaaagtta gcattaaaac ttttatcaat accagccagt 2221 agcgcagagc tgaaagagtg ttttccctag caggtaatat aataacagaa aagcgaaata 2281 gattatgccc aaaatctgta gatagcctcc tttttttgca ttcctattac aaaaacctaa 2341 acaactcgca atagatattc cttcttataa gtatatttta tattattaat tcttattatt 2401 tgcttaattt ttgtataagt gttaagtatt aagtataagt attaattaat aatatataag 2461 attgttattt gttaagacat tagatgcaaa atcctaaaaa tgtgaaagta atgaagttcc 2521 ttatatttaa tagatacttt ttaagcccac tatgttttta ttatttagat tgagacatta 2581 aaaaacgtaa aaatcaacaa atgccgtctt taattgcaat tactttatgt gtttgaaatg 2641 ggaggcaccc attgagtcca tcaaagagca aagacatgag cacaaaaatt ttcttgggta 2701 ttccctttta cccttcattt cttatacccg tcacgcttcc acccatacaa attttaggcg 2761 tacaaaaaat gagaactgca gcccgcatac aaaaaatgac ctgcggccga tcgttgactg 2821 tgcgtccact cacccatacg gctcttgcgc agcaggcctc gggtggtttt tttactcgta 2881 acaaaaacac aacgtcggta aaacactcga gtattttgtg ttgccgcaag tagggtgtca 2941 aaaaaaacgg ggtgcctaga gtaccgagtg tttatcgggt ggacgtagag tgcgagtggc 3001 gggctgcagt tctctg // LOCUS DMHS09 1429 bp DNA INV 17-FEB-1994 DEFINITION D. melanogaster heat shock gene hsp23 with flanking sequences. ACCESSION V00210 NID g8099 KEYWORDS heat shock protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1429) AUTHORS Southgate,R., Ayme,A. and Voellmy,R. TITLE Nucleotide sequence analysis of the Drosophila small heat shock gene cluster at locus 67B JOURNAL J. Mol. Biol. 165 (1), 35-57 (1983) MEDLINE 83189140 FEATURES Location/Qualifiers source 1..1429 /organism="Drosophila melanogaster" /db_xref="taxon:7227" CDS 435..995 /note="reading frame hsp23 protein" /codon_start=1 /db_xref="PID:g8100" /db_xref="FLYBASE:FBgn0001224" /db_xref="SWISS-PROT:P02516" /translation="MANIPLLLSLADDLGRMSMVPFYEPYYCQRQRNPYLALVGPMEQ QLRQLEKQVGASSGSSGAVSKIGKDGFQVCMDVSHFKPSELVVKVQDNSVLVEGNHEE REDDHGFITRHFVRRYALPPGYEADKVASTLSSDGVLTIKVPKPPAIEDKGNERIVQI QQVGPAHLNVKENPKEAVEQDNGNDK" BASE COUNT 371 a 335 c 333 g 390 t ORIGIN 1 tacatctata catacacata atatttgccg gtgctgatgc gacttatcac tccaccaggc 61 cttttcattc ccactcccct aggagattgc tcattttcca tagcgatact ctcactttca 121 atggcagata atgcgtaatt gcggcaaatt cgagaactct gcgatatttt cagcccgaga 181 agtttcgtgt cccttctcga tgtcgatgtt tgtgccccct agcacacaga cacgacgcgc 241 acacacacag cgccgacggg cgccgcacac ttcgacagca agcggttgta taaatatccg 301 gcactttcgt gcaaccggcg tcagttgaat tcaaaaagcc aaagcgataa cagctaaagc 361 gaaagtaacc tattaacaaa agaagtttat tctttgaagg aggagaatca tcttgaagca 421 attaaaaaac aaaaatggca aatattccat tgttgttgag ccttgccgac gatttgggcc 481 gaatgtcgat ggtgcccttc tatgagccct actactgcca gcgccagagg aatccctact 541 tggccctggt tggaccgatg gagcagcagc tgcgccagct ggagaaacag gtgggcgcct 601 cgtcgggatc gtcgggagcc gtgtcgaaaa tcggaaagga tggcttccag gtctgcatgg 661 atgtgtcgca cttcaagccc agcgaactgg tggtcaaagt gcaggacaac tccgtcctgg 721 tggagggcaa ccatgaggag cgcgaagatg accatggctt catcactcgt cactttgtcc 781 gccgctatgc tctgccaccc ggttatgagg ctgataaggt ggcctccacc ttgtcctccg 841 atggtgtcct gaccatcaag gtgcccaagc caccggcaat cgaggataag ggcaacgagc 901 gcatcgttca gatccagcag gtgggacccg cccatctcaa tgtgaaggag aatcccaagg 961 aggcggtgga gcaggacaat ggcaacgata agtagaggac tcgttccggg agatgccctg 1021 cattatttaa ccattatcaa agtcatacat ctgttttata agctgtagtt atccaaggac 1081 acttcactca tacacaatag ccattaaggg tgtcctgctt taatcttagt ttggaatatg 1141 tattactaaa ttggcgaaat taatattacc cataaaaata aataacaagt acacttactt 1201 ataattgtgt ttggtctgtt tttctggttg gttatgggtt actattacta ttactattac 1261 ttcgggaatt gtttgggtag ctcggccctt tttcctgtga tcccggttct agatttactt 1321 tctgcattgt atattgcatt gttgtgtcac gtaaaatggc atttttattt aattgttgtt 1381 tgtgtacata actgactttt tacattactt cggtaaagag tcttgaagc // LOCUS DMHSP22G 1560 bp DNA INV 17-FEB-1994 DEFINITION Drosophila melanogaster gene for heat shock protein hsp22. ACCESSION X03888 J01090 J01091 J01098 V00209 NID g8108 KEYWORDS heat shock protein 22. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1560) AUTHORS Southgate,R., Ayme,A. and Voellmy,R. TITLE Nucleotide sequence analysis of the Drosophila small heat shock gene cluster at locus 67B JOURNAL J. Mol. Biol. 165 (1), 35-57 (1983) MEDLINE 83189140 FEATURES Location/Qualifiers source 1..1560 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..1560 /note="Heat shock protein 22" /gene="Hsp22" /allele="" /db_xref="FlyBase:FBgn0001223" promoter 482..489 /gene="Hsp22" /note="TATA-box" /db_xref="FlyBase:FBgn0001223" CDS 766..1290 /gene="Hsp22" /codon_start=1 /db_xref="FlyBase:FBgn0001223" /product="heat shock protein hsp22" /db_xref="PID:g8109" /db_xref="FLYBASE:FBgn0001223" /db_xref="SWISS-PROT:P02515" /translation="MRSLPMFWRMAEEMARMPRLSSPFHAFFHEPPVWSVALPRNWQH IARWQEQELAPPATVNKDGYKLTLDVKDYSELKVKVLDESVVLVEAKSEQQEAEQGGY SSRHFLGRYVLPDGYEADKVSSSLSDDGVLTISVPNPPGVQETLKEREVTIEQTGEPA KKSAEEPKDKTASQ" polyA_signal 1452..1457 /gene="Hsp22" /db_xref="FlyBase:FBgn0001223" polyA_site 1468..1474 /gene="Hsp22" /note="polyA region" /db_xref="FlyBase:FBgn0001223" BASE COUNT 514 a 342 c 327 g 376 t 1 others ORIGIN 1 gaataaatga agattttaat attaatagct aaaaaaaaac agaaaactta aattatttgt 61 taatattaag ctgtattttt catatatctc aagttctaga ctgcccatgc aagcttatca 121 atacacacac gtatacactc gcactcagaa agctgtgcac tcccacaaaa ctctctctcc 181 cactctctaa tcgagctctc tcaatgtgtc tctctgcgta tggaaactga ccttccccaa 241 ggcgcaacag cgagagagaa cttcgctaaa tgctaaaata aaaggtaaat aaagtaatat 301 ttggacaccc agagagcccc agaaacttcc acggagttcg ctaaagaaca gtgaacaacc 361 cctaactaaa tgccattgcc cgatttcagg caaagcggaa aattgcatca gcaaagggcg 421 aagaaaattc gagagagtgc cggtattttc tagattatat ggatttcctc tctgtcaaga 481 gtataaatag ccaccggttg gacactacgc tctcagttca aaaaaaccaa accaactgct 541 aacaactcga agaaagtcaa ctaaattaaa atttcgccag ctaaatagaa atttcatacg 601 attgaaacct cagacaacaa gattatcttc gaaacataga ggaaaaattt aaaaaaaaag 661 ccaagaagta tttcaaagat aacaattgga cggaatttca tcaaattatt cgaatttgca 721 taagaagctt tatttggaaa aacccaagtt accttatcaa ctacaatgcg ttccttaccg 781 atgttttggc ggatggccga ggagatggca cggatgccac gcctctcctc gccctttcac 841 gccttcttcc acgagccgcc cgtttggagt gtggcgctac cgaggaactg gcagcatatt 901 gcccgctggc aggagcagga gttggctccg ccggccaccg tcaacaagga tggctacaaa 961 ctcaccctgg acgtcaagga ctacagcgag ctgaaggtca aggtgctgga cgagagcgtg 1021 gtcctggtgg aggcaaaatc ggagcagcag gaggccgaac aaggtggcta tagttccagg 1081 cacttcctcg gccgatacgt tctgccggat ggatacgagg cggacaaggt gtcctcgtcg 1141 ctgagcgacg acggcgttct gaccatcagt gtgcccaatc ctccaggcgt gcaggagaca 1201 ctcaaggagc gtgaggtgac catcgagcag actggcgagc cggcaaagaa gtccgccgag 1261 gagccaaaag acaaaaccgc cagtcagtag aaataagttg agattatact aaaaccgata 1321 aaatgctagt gaactcctat gtttagatat tccaaaacct atcaaattta agttcttgtt 1381 aaattaacaa gttaatttta aaacaattgt gattcggtag cccgcaagcc caataatttt 1441 atttagaaga aaataaatat ttgaaaagac tatgatcaaa atatttactt tnattggttg 1501 ggttgggaac acatttgata tggatagtat tatagattat tatatatatc tgtcaagtct // LOCUS DMHSP26G 2050 bp DNA INV 17-FEB-1994 DEFINITION Drosophila melanogaster gene for heat shock protein hsp26. ACCESSION X03890 J01094 J01095 J01099 V00211 NID g8112 KEYWORDS heat shock protein 26. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2050) AUTHORS Southgate,R., Ayme,A. and Voellmy,R. TITLE Nucleotide sequence analysis of the Drosophila small heat shock gene cluster at locus 67B JOURNAL J. Mol. Biol. 165 (1), 35-57 (1983) MEDLINE 83189140 FEATURES Location/Qualifiers source 1..2050 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2050 /note="Heat shock protein 26" /gene="Hsp26" /allele="" /db_xref="FlyBase:FBgn0001225" promoter 279..285 /gene="Hsp26" /note="pot. TATA-box" /db_xref="FlyBase:FBgn0001225" promoter 438..444 /gene="Hsp26" /note="pot. TATA-box" /db_xref="FlyBase:FBgn0001225" CDS 653..1279 /gene="Hsp26" /codon_start=1 /db_xref="FlyBase:FBgn0001225" /product="heat shock protein hsp26" /db_xref="PID:g8113" /db_xref="FLYBASE:FBgn0001225" /db_xref="SWISS-PROT:P02517" /translation="MSLSTLLSLVDELQEPRSPIYELGLGLHPHSRYVLPLGTQQRRS INGCPCASPICPSSPAGQVLALRREMANRNDIHWPATAHVGKDGFQVCMDVAQFKPSE LNVKVVDDSILVEGKHEERQDDHGHIMRHFVRRYKVPDGYKAEQVVSQLSSDGVLTVS IPKPQAVEDKSKERIIQIQQVGPAHLNVKANESEVKGKENGAPNGKDK" polyA_signal 1390..1395 /gene="Hsp26" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0001225" polyA_signal 1421..1426 /gene="Hsp26" /note="pot. polyA signal" /db_xref="FlyBase:FBgn0001225" BASE COUNT 553 a 480 c 456 g 561 t ORIGIN 1 caaagtaaaa cttaaagaca gaaacacgaa ataatgtact taataaagag gaaaaccaga 61 ataaaaaaaa ctgacgtttt gttttgttgc cgttagccgg ctgtttcttt tgcgctcttt 121 ctagaaactt cggctctctc actcatacag gcgcactagc tctgcttttg cgcgtacgac 181 aacaactact ttaaaatttc tcgaaactca tggcatttat tgggaaaggt tagttagttt 241 tattttttgt ttttagagca gcattcaatt tagactttta taaaagaaat ttctaatttg 301 atccctcgtt tatcaaacga tacaaagcta tattcataat tttttctctc tgtgcacgtt 361 ctctctcttc tcttctctct ctctactctt tcctttttct gtcactttcc ggactcttct 421 agaaaagctc cagcgggtat aaaagcagcg tcgcttgacg aacagagcac agatcgaatt 481 caaaaatcga gcagtgaaca actcaaagca actttgcgca aaagcaaaac ttcaaacgag 541 aaaaaaaagg attaaaaacc tttgcttaca agtcaaacaa gttcattcaa cttaaccaaa 601 gaaaaaatat ttcaatctcg caaaaggaac ataacctaaa ggaaacgtaa aaatgtcgct 661 atctactctg ctttcgcttg tggatgaact ccaggagccc cgcagcccca tctacgagct 721 tggactggga ttgcatccgc attcccgcta cgtgctgccc cttggcactc agcagcgccg 781 ttccatcaac ggatgccctt gcgcatcgcc gatatgccca tcgtcgcccg ccggccaggt 841 tttggctttg cggcgcgaga tggccaaccg caacgacatt cactggccgg caaccgccca 901 tgtgggcaag gatggattcc aggtgtgcat ggacgtcgcc cagttcaagc ccagtgagct 961 caacgtgaag gtggtggacg actccatctt ggtcgagggc aagcatgagg aacgccagga 1021 cgaccatggt cacatcatgc gccactttgt gcgccgctac aaggttcccg atggctacaa 1081 ggcggagcaa gtggtctcgc agctgtcgtc ggatggcgtg ctcaccgtca gtattcccaa 1141 gccgcaggcc gtcgaggaca agtccaagga gcgcatcatt caaattcagc aagtgggacc 1201 cgctcacctc aacgttaagg caaatgaaag cgaggtgaag ggcaaggaga acggagcacc 1261 caacggcaag gacaagtaaa ggagccatca tcatccaaca tcatccatca tcattcccct 1321 acttaattgt tcctaattta ttgcattgta tttgtaatga gctaaagact agaatactca 1381 tattaattta ataaatcctt ttgttcacct ggtgtggaaa attaaaattg ttgcgacttt 1441 tgtatatgaa agttggtttt tgaaagaggc aaatatttgg aaatcgatcc gaagatttga 1501 attgggcgcg acgaggtgaa gacccattcg taaacaccag tgtttctacc aaatatttat 1561 tgcgcattta ttatatcaac tacgggtaca atttgtattt tatttatgtt tgaatccaat 1621 ttaaatgttc ggctgcaatt gcttggtgtc cgaaaatagt tcaccttgag ttaggcgcat 1681 tcgatggttg ggatttgggt ttggtaaaca cacattcact gcttgccttc ctgatttctg 1741 acacatggtc cactatttcc agggcagggc cagctttccg gtttcatgaa cgcggaccaa 1801 tctctctccg ggcgtgtagt acttggctgg cggcggtggt ggagccttga tggtgaggat 1861 gccatcgctg gatatgtccg agattacctc attggcattg tatccgcggg gcagaaggta 1921 cttcctcaca aagtgccgct ccactaggcc attggaaccc tcgtcgcgac gattgtgatt 1981 tccctggacg atgacatagt cgtcattggt tttgaccaca atgtcgtggg gatgaaattg 2041 tcgtatcgat // LOCUS DMHSP27G 1361 bp DNA INV 17-FEB-1994 DEFINITION Drosophila melanogaster gene for heat shock protein hsp27. ACCESSION X03891 J01096 J01097 J01101 V00212 NID g8115 KEYWORDS heat shock protein 27. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1361) AUTHORS Southgate,R., Ayme,A. and Voellmy,R. TITLE Nucleotide sequence analysis of the Drosophila small heat shock gene cluster at locus 67B JOURNAL J. Mol. Biol. 165 (1), 35-57 (1983) MEDLINE 83189140 FEATURES Location/Qualifiers source 1..1361 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..1361 /note="Heat shock protein 27" /gene="Hsp27" /allele="" /db_xref="FlyBase:FBgn0001226" promoter 258..264 /gene="Hsp27" /note="TATA-box" /db_xref="FlyBase:FBgn0001226" CDS 409..1050 /gene="Hsp27" /codon_start=1 /db_xref="FlyBase:FBgn0001226" /product="heat shock protein hsp 27" /db_xref="PID:g8116" /db_xref="FLYBASE:FBgn0001226" /db_xref="SWISS-PROT:P02518" /translation="MSIIPLLHLARELDHDYRTDWGHLLEDDFGFGVHAHDLFHPRRL LLPNTLGLGRRRYSPYERSHGHHNQMSRRASGGPNALLPAVGKDGFQVCMDVSQFKPN ELTVKVVDNTVVVEGKHEEREDGHGMIQRHFVRKYTLPKGFDPNEVVSTVSSDGVLTL KAPPPPSKEQAKSERIVQIQQTGPAHLSVKAPAPEAGDGKAENGSGEKMETSK" BASE COUNT 419 a 313 c 355 g 274 t ORIGIN 1 gagccagtag atgcgagaga aaactgtttg ttgaattacg gggcgtattc aaaggggctt 61 ttaaatgtcg cttaaatttt aagtttgaca ggctaataat tgcttgccta tatctaaata 121 ttattatatt tgcattaggg gatcataggg aaaaccttct ctgcaggcaa aatctaacga 181 agatggcaac cccccatcat tttattaaag ttccgtccct ggttgccatg cactagtgtg 241 tgtgagccca gcgtcagtat aaaagccggc gtcaacgtcg cccgagcaca gtctaaactg 301 aaaaattgaa ggcaaacgtt gaagcaaact tcgctaaaaa aattcgaaaa agcaaaaaaa 361 attcctttgt ctagacaggg ttgtgaataa agagaaaaaa aatcaaaaat gtcaattata 421 ccactgctgc acttggcccg ggagttggat catgactacc gcaccgactg ggggcatttg 481 ctggaggatg acttcggttt tggcgtccat gcccacgatc tgttccatcc gcgtcgcctg 541 ctactgccca acaccctggg actgggtcgt cgtcgttatt cgccgtacga gaggagccat 601 ggccaccaca atcaaatgtc acgtcgcgcg tcggggggtc caaacgctct gctgcccgcc 661 gtgggcaaag atggcttcca ggtgtgcatg gatgtgtcgc agttcaagcc caacgagctg 721 accgtcaagg tggtggacaa caccgtggtg gtagagggga agcacgagga gcgcgaggac 781 ggccatggaa tgatccagcg tcactttgtg cgcaagtata ccctgcccaa gggctttgac 841 cccaacgagg tagtgtccac tgtctcatcc gacggtgtgc tgaccctcaa ggccccgccg 901 ccgcccagca aggaacaggc caagtcggag cgcattgtcc agatccagca aacggggcct 961 gcccatttga gcgtcaaggc accggcaccc gaggctggcg atggaaaagc cgaaaatggc 1021 agcggcgaga aaatggagac tagcaagtaa aagacgaaaa gaggaagaag actaggagat 1081 gaagaagacg agaagaggaa gaagactaga agaggaagaa gtcgtgaagg aggaagaaga 1141 cgacgagatt cgctggcgaa gcacgagaga aagaagaatt taaaagaaga aacgggagtg 1201 ttgccgcgct gctcggagag agcaagacta aaaaggacac accacaacac acccaatgta 1261 ttacattcac acacatcaca tcattacatc atcatcataa catcctagac taagtgattt 1321 taaactccat ttatcataat gcataaaaaa aacaaaattt t // LOCUS DMHSP7 1350 bp DNA INV 12-SEP-1993 DEFINITION Alpha-gamma fragment from the Drosophila heat shock genes. ACCESSION V00219 J01067 NID g8123 KEYWORDS heat shock protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1350) AUTHORS Hackett,R.W. and Lis,J.T. TITLE DNA sequence analysis reveals extensive homologies of regions preceding hsp70 and alpha-beta heat shock genes in Drosophila melanogaster JOURNAL Proc. Natl. Acad. Sci. U.S.A. 78, 6196-6200 (1981) FEATURES Location/Qualifiers source 1..1350 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..1350 /note="Heat-shock-protein-70Ba" /gene="Hsp70Ba" /allele="" /db_xref="FlyBase:FBgn0013277" mRNA 777..>1350 /gene="Hsp70Ba" /note="messenger RNA" /db_xref="FlyBase:FBgn0013277" CDS 857..895 /gene="Hsp70Ba" /note="reading frame" /codon_start=1 /db_xref="FlyBase:FBgn0013277" /db_xref="PID:g8124" /db_xref="FLYBASE:FBgn0013277" /translation="MYVICMYMSQII" BASE COUNT 433 a 246 c 266 g 405 t ORIGIN 1 aagcttttct cttattgtgt tatcctcttt agcgtgtaat ttggctgcct gcgtgcatga 61 acattgtact ctagatcagt cacaataaat acttgaaacg aatagtttaa atgtaaatac 121 tgcgctcaga aagttatata gaaagtccat atccatatcc ttcgaaaaaa tgagttatta 181 agtttaatta cattacatag ctttcataaa gcctcggctt ttgcatatgt tttgcatgca 241 tatgtaatac ataatatata tgtacataca tatatcatat tcataaaata tataatttta 301 aattaaaaaa gcaagcaatc atcatgcaat tgtctgtata aatctaataa aaatttggct 361 tttttaagtt aatatataca tacattttaa agagtatgtt gtcaatgtta cataggcctt 421 tctgacggac aacaaccgca taacaaagcg cttcgattat ctttaacata agttatttaa 481 gcagccgtat ttataaagaa atttccaaaa taaagcgaat attctagaat cccaaaacaa 541 actggttatt gtggtaggtc atttgtttgg cagaaggaaa actcgagaaa tttctctggc 601 cgttattcgt tattctctct tttctttttg ggtctctccc tctctgcact aatgctctct 661 cactctgtca cacagtaaac gacatactgc tctcgttggt tcgagagagc gcgcctcgaa 721 tgttcgcgaa aagagcgcag cagtataaat agaggcgctt cgtctacgga gcgacaagtc 781 aattcaaaca agcaaagtga acacgtcgct aagcgaagct aagcaaataa acaagcgcag 841 aaggagtgtt gaaaatatgt atgtaatatg tatgtatatg tcgcagatca tttaaatgaa 901 acgaaatttc gtgtttctgc ttgcacgcgc atgcagacgc ctcttttatt tttctgatgc 961 gcgcagacaa ccgttagagt ttctgccgac gtagtctggc gcgggtagga gcggggggaa 1021 gtagatgtct gtacgaaagc gagaagcata cagaaaaatg cggtgtgcat aagtattggt 1081 gtatgcgact agaacaactg tcataattgt gttggtattg catgtaaagt caagaactac 1141 gcataattct gattttgtga agaagagatc agtcagtcag ttacgcataa cagacatgcc 1201 tcgctcaagc gccagaaaac gtcgcgcgaa ccataacgag agtagtgaag aggaagaagg 1261 gcatcctgat gactcttcga catatatata ataatatgta ataaagtcaa tgcactgtgt 1321 ctccctcttt tggtcgcggt aaccaagctt // LOCUS DMHSPG3 2497 bp DNA INV 12-SEP-1993 DEFINITION Drosophila heat shock gene 3 from 67B locus. ACCESSION X06542 NID g8128 KEYWORDS heat shock protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2497) AUTHORS Pauli,D. and Tonka,C.H. TITLE A Drosophila heat shock gene from locus 67B is expressed during embryogenesis and pupation JOURNAL J. Mol. Biol. 198 (2), 235-240 (1987) MEDLINE 88118925 COMMENT Beside the major transcript (as indicated in FT) small amounts of larger mRNAs were observed after a heat shock Data kindly reviewed (28-JUL-1988) by TONKA C.H. FEATURES Location/Qualifiers source 1..2497 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /cell_line="Schneider 3 line" /chromosome="67B locus" gene 1..2497 /note="Heat shock gene 67Bc" /gene="Hsp67Bc" /allele="" /db_xref="FlyBase:FBgn0001229" promoter 174..180 /gene="Hsp67Bc" /note="TATA-box" /db_xref="FlyBase:FBgn0001229" precursor_RNA 208..1186 /gene="Hsp67Bc" /note="major primary transcript" /db_xref="FlyBase:FBgn0001229" CDS 376..885 /gene="Hsp67Bc" /note="heat shock protein (AA 1 - 169)" /codon_start=1 /db_xref="FlyBase:FBgn0001229" /db_xref="PID:g8129" /db_xref="FLYBASE:FBgn0001229" /db_xref="SWISS-PROT:P22979" /translation="MPDIPFVLNLDSPDSMYYGHDMFPNRMYRRLHSRQHHDLDLHTL GLIARMGAHAHHLVANKRNGELAALSRGGASNKQGNFEVHLDVGLFQPGELTVKLVNE CIVVEGKHEEREDDHGHVSRHFVPAVSAAQGVRFGCHCFHFVGGWSSQYHGSTISFQG GAQGAHHTH" misc_feature 1162..1167 /gene="Hsp67Bc" /note="polyA signal" /db_xref="FlyBase:FBgn0001229" polyA_site 1186 /gene="Hsp67Bc" /note="polyA site" /db_xref="FlyBase:FBgn0001229" misc_feature 1617..1622 /gene="Hsp67Bc" /note="pot. alt. polyA signal" /db_xref="FlyBase:FBgn0001229" misc_feature 2477..2483 /gene="Hsp67Bc" /note="pot. alt. polyA signal" /db_xref="FlyBase:FBgn0001229" BASE COUNT 759 a 555 c 530 g 653 t ORIGIN 1 ccactttata catacaatgt atgtacatac cttaaagcag atcacatata acagtttacg 61 gtctacgaaa gcttggcccc cagaaggttc ccagttgtct ccctagaatc aacgaaacaa 121 cgagttgctg ctccagaaaa gctctgtggc aatgggcaaa gctcttccgt ctctataaaa 181 gggcgcagac aaaccgttaa actccacatt cgagtcggaa aagtcaaggt gaattgtgcg 241 ccaaactgca gctgagattg tggattcaca ccgctggcaa atcaaccctt ggatactttt 301 gaaaggaaaa caggtcgtcg gttcaacgaa cctccttccg ccagatacac aagaagttaa 361 gcaaagaaaa gtaaaatgcc agatattccc tttgtcttga atttggactc cccggactcc 421 atgtactacg gccacgatat gttcccgaat cgcatgtaca ggcgattgca ttcgcggcag 481 catcatgatc ttgatttgca caccctgggt ctgattgccc ggatgggtgc acatgcccat 541 cacctggtgg ccaataaaag gaacggagag ctggctgcat tgagccgcgg tggagcctca 601 aataagcagg gcaatttcga ggtccatctg gatgtgggac tctttcagcc aggtgaactg 661 accgtcaaac tggtcaacga gtgcattgtg gtcgagggaa aacacgagga gcgcgaggac 721 gatcatggac atgtatcccg gcattttgtt ccggccgtat ccgctgccca aggagttcga 781 ttcggatgcc attgtttcca ctttgtcgga ggatggagtt ctcaatatca cggttccacc 841 attagtttcc aaggaggagc tcaaggagcg catcataccc attaagcatg tgggtccatc 901 ggatctcttc caggaatgga aacggtcata aggaggccgg tccggcagct tctgcttcag 961 agccagaagc caagtgaaga gccccctcct aaagattgca gcctaagcag ccaagtgatt 1021 tcccaagact ctcgtttatc gttgcaccaa aaaaaaagtc caagaaagta tcgcacaaat 1081 cgtattatat ttattaattt attattagct acattttaaa cagtccaatc aaatttttaa 1141 gactaatcga aatccagtat taataaagga atatgaatgt ctcagtaatc aaaagacttt 1201 tactaatatt taagagctta attcatatca aaaagcacga aatccaattt tgggtacaat 1261 attaactttc ctttgttcga ttagacaggt attaaaagct gtgcatatta aaaataggtc 1321 cccggatgtc aatcctactt aaaaaagctt tggttagcct tttcccaggt gcgattgagt 1381 gaacttttga actttgaaat gaaagcccgc cataagtgta attatcgata gcttttagtc 1441 atctttccaa aactatctat cgaagtaaca gtttttaaca agtggtaagt caacgataaa 1501 tttaataaaa gaaactaaca tttaattaca caaagtatat atattatttt taaagttatt 1561 tagcagatgg agtacattat aaactaattt attttgtttg ggattataat ctgaataata 1621 aaaacccgtg acatattgca tgttgcccat ctccagctgg cactgtaacc tcaaaaaaat 1681 gttttgttta cttttgcgcc gctctgcagt tcataattcc tgcaaattaa tcagtaaaac 1741 agattgccaa gcccgcgttc taacaacacc ccaacaatgc tctgcacaac cacaatacgt 1801 aagtgggagc ctttaaacct acagaatcat cactatatta tgccgaaaac ccccactgat 1861 ttatgaaatt cggttgattt tacagcgcgg cggcatggcg agttcgaatg gcaggatccc 1921 aagtccacgg atgaaatgta agtccctaga gagaagctaa ttgtacacaa tataaccaag 1981 acgtactcta caaacacaga gtgaacatca catatgtgga caaggatgga aagcgcacca 2041 aggtccaggg caaagtgggc gacaatgttc tgtacttggc ccatcgccat ggaatcgaga 2101 tggaaggcgc ctgtgaggct tcgctggcct gcaccacctg tcacgtgtac gtccagcatg 2161 attacctgca gaagttaaaa gaggccgagg agcaggagga cgacctgctg gatatggcgc 2221 catttctgcg cgagaactcc cggctcggct gtcagatact cctcgacaag agtatggagg 2281 gcatggaact ggagctgccc aaggcaccag gaacttctac gtcgatgggc acaagccaag 2341 gccacattaa cattattgtt atatcccgca ttattaataa tatataacga ctgttgaatt 2401 accatttggt tctttcccaa ctttgtatat ttcttaagat gtaaacaatg cttcggtttt 2461 gtgttgttcc atcgtgaatt aaactaaaga agaattc // LOCUS DMHSTH331 752 bp DNA INV 29-AUG-1995 DEFINITION D.melanogaster mRNA for histone H3.3. ACCESSION X81205 NID g963030 KEYWORDS histone H3.3. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 752) AUTHORS Akhmanova,A.S., Bindels,P.C., Xu,J., Miedema,K., Kremer,H. and Hennig,W. TITLE Structure and expression of histone H3.3 genes in Drosophila melanogaster and Drosophila hydei JOURNAL Genome 38 (3), 586-600 (1995) MEDLINE 96023949 REFERENCE 2 (bases 1 to 752) AUTHORS Akhmanova,A.S. TITLE Direct Submission JOURNAL Submitted (03-SEP-1994) A.S. Akhmanova, Catholic University of Nijmegen, Dept of Molecular & Developmental, Genetics, Toernooiveld, 6525 ED Nijmegen, NETHERLANDS FEATURES Location/Qualifiers source 1..752 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /tissue_type="testis" /clone_lib="ZAPII" /clone="Dm37.5" /map="9D" gene 76..486 /note="Histone H3.3B" /gene="His3.3B" /allele="" /db_xref="FlyBase:FBgn0004828" CDS 76..486 /gene="His3.3B" /codon_start=1 /product="histone H3.3" /db_xref="PID:g963031" /db_xref="FLYBASE:FBgn0004828" /db_xref="SWISS-PROT:P06351" /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA" BASE COUNT 204 a 196 c 171 g 181 t ORIGIN 1 tcgtgttgaa agtgacaaat tgtgaagaat aactttattc cgtgtttaac gtttaaaaaa 61 aaaagctaag aaaacatggc tcgtactaag cagactgccc gtaagtcgac cggaggaaag 121 gctcctcgta agcagctagc caccaaggct gcccgtaaat cggcgccatc caccggcgga 181 gtgaagaagc cccatcgtta tcgtcccgga actgtggctc ttcgtgagat ccgtcgttac 241 cagaagtcga ccgagttgct catccgcaag ctgcccttcc agcgtctggt tcgtgaaatc 301 gctcaggatt tcaagaccga tctgcgtttc cagtcggctg ccatcggtgc cttgcaggaa 361 gcatctgagg cgtacctggt gggtctcttc gaggacacca acttgtgcgc tatccacgcc 421 aagcgcgtga caatcatgcc taaggacatc cagttggcgc gccgcatccg tggcgagcgt 481 gcttaaggtg gatcagcagg aacgccagat tcgatcactg tcgtccattc ccgaacagta 541 gaccattcac gtaccgtttt aggagaggtg cacgccaagg agctatacca gcgacacatt 601 gatccaatct atcattcata tttacatgta tacatttatc atccttttgt tgttcaatcg 661 aatcgtcagc atgacgttgt cgataagaaa aacaccacac acaaaacaac acacaacatt 721 actgtaatgc ttaaaaatta ttttataact ct // LOCUS DMIS297 6995 bp DNA INV 12-SEP-1993 DEFINITION Drosophila melanogaster transposable element 297. ACCESSION X03431 NID g8146 KEYWORDS copia-like element; long terminal repeat; transposon; unidentified reading frame. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 6995) AUTHORS Inouye,S., Yuki,S. and Saigo,K. TITLE Complete nucleotide sequence and genome organization of a Drosophila transposable genetic element, 297 JOURNAL Eur. J. Biochem. 154 (2), 417-425 (1986) MEDLINE 86108354 COMMENT Data kindly reviewed (19-JUN-1986) by K. Saigo. FEATURES Location/Qualifiers source 1..6995 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..6995 /note="297 element" /gene="297" /allele="" /db_xref="FlyBase:FBgn0000005" repeat_region 1..414 /note="5' LTR" promoter 276..282 /gene="297" /note="Hogness box" /db_xref="FlyBase:FBgn0000005" misc_feature 304..309 /gene="297" /note="polyadenylation signal" /db_xref="FlyBase:FBgn0000005" misc_feature 414..431 /gene="297" /note="primer binding site" /db_xref="FlyBase:FBgn0000005" misc_feature 773..2044 /gene="297" /note="ORF1" /db_xref="FlyBase:FBgn0000005" CDS 803..2047 /gene="297" /note="put. ORF coding region (aa 1-414)" /codon_start=1 /db_xref="FlyBase:FBgn0000005" /db_xref="PID:g8147" /db_xref="FLYBASE:FBgn0000005" /db_xref="SWISS-PROT:P20828" /translation="MSQPIIALSDINLAEARRQLKDIMPFKGDPETLHTFISRVDYVI SLYQTNDVRQQRILLGAIERNLDGQITRSLGLPNVEDWPTLKARLIAEFKIQTPNYKL LENFRETPYRGSLRAFCEEAERRRQLLISKLHLEGNQSDFLIYIQGIKESIKILIRKL PIQLFTILAHHDITDLRSLITIAQNEGIYEEHINFEFYEKPEYRNKNSNSNQNSKTQK FNTNVQTQNRPSYSQYSQPFQPNFNQYIQPFRPSYTQQITNNPPMWHAPNYFRPNQYI NPQPIIQKNHFQQYPNKAQFPQTTHFRGNTYPRLQQPSTYKNTNFPITKRLRPSDSEQ TKMSIDEIRFQDAHEFEQVQPNYYEQQYFNQNQYNPYQNHSFINEGQQQVQFVQINNK QNQNNSELNENFRLTVPENTNT" misc_feature 1999..5175 /gene="297" /note="ORF2" /db_xref="FlyBase:FBgn0000005" repeat_unit 2001..2010 /gene="297" /note="inverted repeat A" /db_xref="FlyBase:FBgn0000005" misc_feature 2001..2020 /gene="297" /note="palindrome structure" /db_xref="FlyBase:FBgn0000005" repeat_unit 2011..2020 /gene="297" /note="inverted repeat A'" /db_xref="FlyBase:FBgn0000005" misc_feature 5145..6557 /gene="297" /note="ORF3" /db_xref="FlyBase:FBgn0000005" misc_feature 6571..6581 /gene="297" /note="polypurine sequence" /db_xref="FlyBase:FBgn0000005" repeat_region 6582..6995 /note="3 LTR" promoter 6857..6863 /gene="297" /note="Hogness box" /db_xref="FlyBase:FBgn0000005" misc_feature 6885..6890 /gene="297" /note="polyadenylation signal" /db_xref="FlyBase:FBgn0000005" BASE COUNT 2811 a 1356 c 972 g 1856 t ORIGIN 1 agtgacgtat ttgggtggtc caaaccagcc acttccatta tttcaaagaa atcagtaatg 61 cactctagta attttccata actgtatccc agctgcgcag actcgtttat cttttgcagc 121 gcagcgttct ttgtaaacat cctaaagacc tgcctaagca gatttgactg ccctctttca 181 acgctaccta atcttaagaa cccaagagcg aggctctccc gaaatacaaa tattgttcaa 241 atactgaggc ttctcctcaa tccaatttgc atttgatttt tagtcttaag ctgagatcca 301 aagaataaag tcgtgaaact atttctccta aaaactattt tttatttctt ggcgttgtcc 361 ttagtcaact gacgggacat tagttcgact cataaataaa acaacaattt tactggcgca 421 gtcggtagga tacaaaagta tccgaaaaaa aagaaccttc gaatggaaaa taagttaaat 481 tttatagtcc tgtgctcgaa acatctccca aaataaattc gtgaaaactc ttcaacttca 541 attataattc caattcggtt atccaataat aagtggaagt gaaatacgaa acaaaaatat 601 taagtccaaa ggcaactaag ttttaaaacc aacatataaa aataaaaaat taaaacaata 661 tagaatttta ataatacaac acaaaaattt acaaaacaaa aaaacaaaca agtgaaacta 721 gaaagcttaa aaataataat aacattgaat ccgaaacaaa acaaaaaaat aaaacacaaa 781 agttaaaaat tttacaataa aaatgtcaca accaattatt gcgctgagcg acataaacct 841 tgccgaagcc cgtcggcagc ttaaagacat tatgccattc aagggtgatc cagaaaccct 901 tcacaccttt atcagcagag tggattacgt aatttcgctc taccaaacaa atgatgtccg 961 acaacagagg attctactgg gagccatcga aaggaacttg gacggacaaa ttacacgatc 1021 tttgggactt ccgaacgtcg aagattggcc tacccttaaa gcaagactca tcgcggaatt 1081 taaaattcaa acaccaaact acaaacttct ggagaacttc agggagacac catacagagg 1141 aagcctaaga gcattctgcg aagaagcgga gagacgacgt caattactaa tttcgaaact 1201 acacctggaa ggtaaccaat cggattttct tatttatatt cagggtatta aagaatctat 1261 taagatactg ataaggaaac taccaataca attattcact attttagccc atcacgatat 1321 tacagactta agatccttaa ttaccattgc acaaaatgag ggaatttatg aagaacacat 1381 taattttgaa ttttatgaaa aaccagaata tcgtaataaa aattcaaatt ctaaccagaa 1441 ttcgaaaaca caaaaattca atacaaatgt tcaaactcaa aatcgaccaa gttactcaca 1501 atattcccaa cccttccaac ctaattttaa tcaatacatt caaccattta gacctagcta 1561 tacacagcag ataactaaca acccacccat gtggcacgca cctaattatt tcagacccaa 1621 ccaatacata aacccacaac ccattattca aaaaaatcat ttccaacaat atcccaacaa 1681 agcccaattt ccccaaacaa cgcattttag aggaaataca taccctcgac tacaacaacc 1741 ctctacatat aaaaatacta acttcccgat tactaaacga ctaagaccat cggacagtga 1801 acaaactaaa atgtctattg acgaaattag attccaagac gcgcatgaat tcgaacaagt 1861 ccaacctaat tattacgagc aacagtattt taaccaaaat caatacaatc cgtatcaaaa 1921 tcatagcttc attaatgaag ggcaacaaca agttcaattt gtacaaatta ataacaaaca 1981 aaaccaaaat aattctgaac taaacgaaaa ttttcggtta acagttccgg aaaatacgaa 2041 tacataaaaa tagtatacaa agggcgttca tacaaatgcc ttctagacac aggatcaaca 2101 attaatatga tcaatgaaaa tatattttgt cttcccattc aaaatagtag atgtgaagtt 2161 ttaacatcaa atggccctat taccttgaac gacttgatta tgttacccag aaatagtatt 2221 ttcaaaaaaa ccgaaccatt ttatgtgcac agattttcta ataattacga tatgctaatt 2281 ggcagaaaat tgttgaaaaa tgctcaatca gttattaatt acaaaaatga tacagttacc 2341 ctttttgatc aaacatacaa attaattact tcagaatccg aaagaaacca aaatttgtat 2401 atccaaagga caccagaatc aattgcaagc tcagatcagg aatcaataaa aaaattagat 2461 ttttcacagt ttcgattaga tcacctaaat caggaggaaa cttttaagtt aaaaggcttg 2521 ttaaataaat ttagaaatct tgaatataag gagggagaga aattaacatt tacaaataca 2581 attaaacacg tactaaatac aacacataac tccccaattt attcgaaaca atacccactt 2641 gcgcaaacac acgaaatcga agtagaaaac caagtacagg aaatgctgaa tcagggatta 2701 attagggaaa gtaattctcc atacaatagt cctacttggg tcgtaccaaa gaaaccggat 2761 gcttctggtg caaataagta cagggtagta attgattata gaaagctaaa tgaaataacc 2821 atacctgaca gatatccaat tccaaatatg gacgaaattc ttggcaaact gggtaaatgc 2881 caatatttta caacgatcga tctggcaaag ggatttcatc aaatagaaat ggacgaagaa 2941 tcaatttcta aaactgcatt ctccacaaaa agcggtcatt acgaatacct tcgaatgcca 3001 tttggcctta ggaatgcacc cgctactttt caaaggtgca tgaataatat ccttcgaccg 3061 ttgcttaaca aacactgttt ggtgtatctg gatgatatta taattttttc aacatccctt 3121 acagaacatt taaattcaat acaattagtt tttacaaagc ttgcagatgc aaatttaaaa 3181 ttgcaactag acaaatgtga gttcttaaaa aaggaagcta actttcttgg tcacatagtt 3241 acccctgatg gtattaaacc aaatcctatt aaagttaaag ccatagtttc atacccaatt 3301 ccgacaaaag ataaagagat aagagctttc cttggattaa caggttatta tcgcaaattt 3361 attccaaatt acgcagacat agcaaaaccc atgaccagct gcttaaaaaa aaggacaaag 3421 atagatacac aaaaacttga gtacatagag gcattcgaaa aacttaaggc tttgataatt 3481 cgtgacccaa ttttacaatt acctgatttt gaaaagaaat ttgttttaac cacagatgca 3541 agtaacttgg ccctcggggc tgtcctttct caaaacggtc atcctatatc ttttattagt 3601 agaacactta acgatcacga attaaattac agtgctatcg aaaaagaatt acttgccata 3661 gtttgggcca caaaaacttt tcgacattat ttactaggac gacaatttct cattgccagt 3721 gaccatcaac ctcttagatg gcttcataac ttaaaggaac caggtgctaa gttagaaaga 3781 tggagagtta gattaagcga ataccaattt aaaatagatt atattaaagg gaaagaaaat 3841 tcagttgccg atgcattatc aagaattaaa attgaagaaa atcatcatag tgaagctact 3901 caacatagtg cagaagagga caatagcaac cttattcatt taacagaaaa accaataaat 3961 tatttcaaaa aacaaataat ctttattaaa tccgataaaa ataaagtaga gcattcaaaa 4021 atattcggta actccattac cacaattcaa tatgacgtaa tgacacttga aaaggccaaa 4081 caaattttac tcgatcactt tatccataga aacattacca tttatattga gagcgatgta 4141 gattttgaaa tcgttcaaag agcacacata gaaattgtta ataccaccta cacaaaagta 4201 attcgcagtc ttttcctatt aaagaacgtt ggttcatacg ccgaattcaa agaaatcata 4261 cttcaatcac atgaaaaact tttacaccct ggtatacaga aaatgacaaa attatttaaa 4321 gaaaatcact tctttccaaa tagccaacta ttaattcaga atataataaa cgaatgcaac 4381 atatgcaatt tggccaaaac agaacataga aacaccaaaa tgcctttaaa aatcacaccc 4441 aacccggaac attgccgaga aaaatttgta gtagatattt attcatctga gggaaaacat 4501 tacatcagtt gcattgatat ttattctaaa ttcgctacac ttgagcaaat taaaactaag 4561 gattggatag aatgcagaaa cgcattaatg cgcattttta atcaactagg aaaacccaaa 4621 ttattaaagg cagacagaga cggagctttc tccagtttag ctttaaagcg atggcttgaa 4681 gaagaagaag tcgaattaca gctcaataca gcaaaaaacg gagtagcaga cgtcgaaaga 4741 ttacacaaaa caataaatga aaaaattcgt ataatcaatt catctgatga tgaagaagta 4801 aaattaagca agatagaaac aatcctctac acatacaacc aaaaaattaa acatgacact 4861 actggacaga gacctgctca aattttctta tacgctgggc atcccatatt agacactcaa 4921 aaaattaaag agaagaaaat agagaaaata aatgaagaca gacgggaatt taatattgac 4981 actaattaca gaaaaggtcc actacagaaa ggcaaattag aaaacccatt taaaccaacc 5041 aaaaatgtag aacagacaga ccctgaccat tacaaaatca ctaatagaaa tagagttacg 5101 cactactaca aaacacaatt caaaaaacaa aagaaaaata ataaactctc aatttcacag 5161 gcacctggta cccgataaca ctattgttta tactgatcac agctgttcat ggacaacaaa 5221 ttcaaattaa taatattgac accaaccacg gatatctcct tttttctgat aagccagtac 5281 agataccatc ctcctttgaa catcactcct taaaaatcaa tttaactgaa atagacatcg 5341 tggttgacta ttttgagcaa agactacgaa ccgattacca tgcaccccag atcaattttt 5401 tatacaataa aataaaaaga gaactagcca gaataaccct gaaacataga aacaaacggg 5461 gttttattaa cattgtgggt tcaggtttta aatacctatt tggaacacta gatgaaaatg 5521 atcgagtcga aatacagaaa aaacttgaaa tcaacgtcca taactcagta aaattacatg 5581 aactcaacga cgccatacga ttgataaatg acggaatgca aaaaatacag aattatgaaa 5641 ataaccacac catcattgac agtcttttgt tcgaactaat gcagtttacg gaatacatag 5701 aagatttgga aatggctatg cagctttcca gacttggact gtttaacccc aaattactaa 5761 actacgacaa acttgaaaat gtgaacagcc aaaacatttt gaacattaaa acatccactt 5821 ggattaacta caatgataac caagtattaa tcatatccca catacccatt tacctttcac 5881 taataagcac aattaaaata attccttacc cagactccaa cggctatcag ctagattaca 5941 cagacacaca atcatatttt gaaaaagaaa ataaagttta taataccgaa aataaagaag 6001 taaaaaatga atgtgtcacc aatattatta aacacttaaa tccaatttgt aattttaagc 6061 cagtacacac gaacgaaata ataaaataca tagaaccaaa cacaattgta acttggaact 6121 taacccaaac aattcttaac caaaattgcc aaaattcaat taataaaata aaaatagaag 6181 gaaacaaaat gataagagta acgcaatgca aaatagaaat caataatata aattttagtg 6241 aaactctgtt agaaccagaa atagatttga caccactata cacaccactt aatataacaa 6301 aaataaaaat tgtaaaacac aacgacatta ttgagatgat ttcagagaac aatattacac 6361 tttacataca aatgatcatt gtaataatcg cactaatttt gttgtactca tatttaagat 6421 atgtatcatt taaaccattt atgatgttgt atgcaaaact taaaataaga aaaaatcaaa 6481 atcaaaacac accacaacaa acagaaatag aagaaattcc atttcccaca ctatatccat 6541 caatcccagc ccaagtatag gcttctcttt aagggaaggg gagtgacgta tttgggtggt 6601 ccaaaccagc cacttccatt atttcaaaga aatcagtaat gcactctagt aattttccat 6661 aactgtatcc cagctgcgca gactcgttta tcttttgcag cgcagcgttc tttgtaaaca 6721 tcctaaagac ctgcctaagc agatttgact gccctctttc aacgctacct aatcttaaga 6781 acccaagagc gaggctctcc cgaaatacaa atattgttca aatactgagg cttctcctca 6841 atccaatttg catttgattt ttagtcttaa gctgagatcc aaagaataaa gtcgtgaaac 6901 tatttctcct aaaaactatt ttttatttct tggcgttgtc cttagtcaac tgacgggaca 6961 ttagttcgac tcataaataa aacaacaatt ttact // LOCUS DMKRAKEN 1294 bp DNA INV 22-JUL-1997 DEFINITION Drosophila melanogaster kraken gene. ACCESSION AJ000516 NID g2274925 KEYWORDS kraken gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1294) AUTHORS Chan,E.H. TITLE Direct Submission JOURNAL Submitted (22-JUL-1997) Chan E.H., Genetics, University of Cambridge, Downing Street, CB2 3EH, ENGLAND REFERENCE 2 (bases 1 to 1294) AUTHORS Chan,E.H., Harris,S.J. and O kane,C.J. TITLE Isolation and characterization of kraken, a Drosophila gene which expressed in the gut JOURNAL Unpublished FEATURES Location/Qualifiers source 1..1294 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="2" 5'UTR <1..140 gene 141..1136 /gene="kraken" CDS 141..1136 /gene="kraken" /codon_start=1 /db_xref="PID:e330265" /db_xref="PID:g2274926" /translation="MGQTRVAATTAAQSPAAELSPETNGQTEEPLQLLGEDSWEEFSI AVPWGTVEAKWWGSKERQPIIALHGWQDNCGSFDRLCPLLPADTSILAIDLPGHGKSS HYPMGMQYFIFWDGICLIRRIVRKYNWKNVTLLGHSLGGALTFMYAASFPTEVEKLIN IDIAGPTVRGTQRMAEGTGRALDKFLDYETLPESKQPCYSYDEMIKLVLDAYDGSVDE PSVRVLMNRGMRHNPSKNGYLFARDLRLKVSLLGMFTAEQTLAYARQIRCRVLNIRGI PGMKFETPQVYADVIATLRENAAKVVYVEVPGTHHLHLVTPDRVAPHIIRFLKEA" 3'UTR 1137..1294 polyA_site 1272 BASE COUNT 292 a 350 c 384 g 268 t ORIGIN 1 aatagctatt gacaatcgaa ttccgttgat cggcaaaact ttgcgacttt agttagtcgc 61 tttttgagat tccccgaggc aggagctcgc ccgatccgcg tccagcatta cggagcacca 121 tttgcgagca gcaattagcc atgggccaga cacgcgtggc agcaacaaca gcggcgcaat 181 ctcccgcggc ggaactttcg ccagagacaa atggccagac ggaggagccc ctgcagctgc 241 tgggcgagga cagctgggag gagttctcta tcgcggtgcc ctggggaacc gttgaggcca 301 agtggtgggg ctcgaaggag aggcagccca tcatcgccct gcacggctgg caggacaact 361 gcggcagctt cgacaggctg tgccccctgc taccggcgga cacctccatc ctggccatcg 421 atctgcccgg gcacggcaag tcgtcgcact atccgatggg catgcagtac ttcatcttct 481 gggacggcat atgcctgatt cgccggatag tccgcaagta taactggaag aacgtcactc 541 tgctgggcca ctcgctgggc ggagctctga ccttcatgta cgcggccagc tttcccacgg 601 aggtggagaa gctgatcaac atcgatatcg cgggtcccac ggtgcgcggc acccaacgga 661 tggcggaggg cactggcagg gcgctggaca agttcctgga ctacgaaacc ctgccggaga 721 gcaagcagcc ctgctactcg tacgacgaga tgatcaaact ggtgctggac gcgtacgatg 781 ggtccgtgga tgagccttcg gttcgtgtgc tcatgaacag gggaatgagg cacaatccga 841 gcaagaatgg ctacctcttt gccagggatc tgaggctaaa agtaagcctg ctgggcatgt 901 tcaccgccga gcagacgttg gcctacgcac gccagattcg ctgtcgcgtg ctcaacattc 961 ggggtattcc cggcatgaag ttcgagacgc cacaggtgta tgcggatgtg attgccacgc 1021 tgcgggagaa tgccgcgaag gtggtctacg ttgaggtgcc cggcacccat catctgcacc 1081 tggtcacccc ggatcgagtg gcgccccaca ttattcgatt cctgaaggag gcgtaagatt 1141 ccattactta agtagacggc tagatagaga gtactgtgtg tgtatatagt tagtgtattt 1201 catcccactt gtgatgtaca gtgatcaaag gtatgtgccc gatttgcacg gctctaaatg 1261 ttataacaga taataaacac aaatttatga ctaa // LOCUS DMLYSDG 690 bp DNA INV 06-NOV-1996 DEFINITION D.melanogaster LysD gene for lysozyme D. ACCESSION X58382 S35547 NID g8197 KEYWORDS LysD gene; lysozyme; lysozyme D. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 690) AUTHORS Hultmark,D., Klemenz,R. and Gehring,W.J. TITLE Translational and transcriptional control elements in the untranslated leader of the heat-shock gene hsp22 JOURNAL Cell 44 (3), 429-438 (1986) MEDLINE 86106221 REFERENCE 2 (bases 1 to 690) AUTHORS Kylsten,P., Kimbrell,D.A., Daffre,S., Samakovlis,C. and Hultmark,D. TITLE The lysozyme locus in Drosophila melanogaster: different genes are expressed in midgut and salivary glands JOURNAL Mol. Gen. Genet. 232 (3), 335-343 (1992) MEDLINE 92269751 REFERENCE 3 (bases 1 to 690) AUTHORS Kylsten,P. TITLE Direct Submission JOURNAL Submitted (12-AUG-1991) P. Kylsten, Dept of Microbiology, Stockholm University, Svante Arrehenius vg 16, Hus F Plan 4, Stockholm S-106 91, SWEDEN FEATURES Location/Qualifiers source 1..690 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /germline /clone_lib="Charon 4" /clone="Lambda 7M13" /chromosome="3L" TATA_signal 41..46 exon 72..552 misc_signal 72..78 /note="6/7 match to insect cap consensus sequence" /citation=[1] exon 78..552 mRNA 82..554 /note="sequence identical to the cDNA clone L2" gene 91..513 /note="Lysozyme D" /gene="LysD" /allele="" /db_xref="FlyBase:FBgn0004427" CDS 91..513 /gene="LysD" /EC_number="3.2.1.17" /note="lysozyme D precursor" /codon_start=1 /product="lysozyme" /db_xref="PID:g8198" /db_xref="FLYBASE:FBgn0004427" /db_xref="SWISS-PROT:P29614" /translation="MKAFIVLVALACAAPAFGRTMDRCSLAREMSNLGVPRDQLARWA CIAEHESSYRTGVVGPENYNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALLTD DITHSVRCAQKVLSQQGWSAWSTWHYCSGWLPSIDDCF" mat_peptide 145..510 /gene="LysD" /db_xref="FlyBase:FBgn0004427" /product="mature lysozyme D" polyA_site 552 BASE COUNT 151 a 209 c 144 g 186 t ORIGIN 1 ataacattgt gaagatctac cagttaagat aataccgccc tataaaagca cggcctacgc 61 tccctcccgt cattagtttc aattcgaatc atgaaggctt tcatcgttct ggttgccctg 121 gcctgtgccg ccccagcttt cggtcgcacc atggaccgtt gctccctggc ccgcgagatg 181 tccaacctgg gcgttcctcg tgaccaattg gctcgttggg cctgtattgc cgagcacgag 241 tcctcctacc gcaccggagt ggttggtccc gagaactaca acggctccaa cgactacgga 301 atcttccaga tcaacgacta ctactggtgc gctcctccca gcggtcgctt ctcctacaac 361 gaatgcggat tgagctgcaa tgccctcttg accgacgaca tcacccactc cgtccgttgt 421 gcccagaagg tcctcagcca gcagggttgg tccgcctggt ccacctggca ctactgcagc 481 ggatggttgc cgtccatcga tgactgcttt taaactgatt ttgaccccga ttaaaacgat 541 tgcataaaac taaatccttt cttaacattg ttgggcacct taaactcaga taccctttaa 601 gtcctctttc aattcagcca catctctctc tataactatt ccgaacatta tcatagcttt 661 ctggaattgt atttattgcg ttcggaattc // LOCUS DMLYSPG 1366 bp DNA INV 06-NOV-1996 DEFINITION D.melanogaster LysP gene for lysozyme P. ACCESSION X58383 S35548 NID g8199 KEYWORDS lysozyme; lysozyme P; lysP gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1366) AUTHORS Hultmark,D., Klemenz,R. and Gehring,W.J. TITLE Translational and transcriptional control elements in the untranslated leader of the heat-shock gene hsp22 JOURNAL Cell 44 (3), 429-438 (1986) MEDLINE 86106221 REFERENCE 2 (bases 1 to 1366) AUTHORS Kylsten,P., Kimbrell,D.A., Daffre,S., Samakovlis,C. and Hultmark,D. TITLE The lysozyme locus in Drosophila melanogaster: different genes are expressed in midgut and salivary glands JOURNAL Mol. Gen. Genet. 232 (3), 335-343 (1992) MEDLINE 92269751 REFERENCE 3 (bases 1 to 1366) AUTHORS Kylsten,P. TITLE Direct Submission JOURNAL Submitted (12-AUG-1991) P. Kylsten, Dept of Microbiology, Stockholm University, Svante Arrehenius vg 16, Hus F Plan 4, Stockholm S-106 91, SWEDEN FEATURES Location/Qualifiers source 1..1366 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /germline /clone_lib="Charon 4" /clone="Lambda 7M13" /chromosome="3L" TATA_signal 646..651 exon 680..1295 misc_signal 680..686 /note="5/7 match to insect cap consensus sequence" /citation=[1] exon 686..1295 gene 694..1119 /note="Lysozyme P" /gene="LysP" /allele="" /db_xref="FlyBase:FBgn0004429" CDS 694..1119 /gene="LysP" /EC_number="3.2.1.17" /note="lysozyme P precursor" /codon_start=1 /product="lysozyme" /db_xref="PID:g8200" /db_xref="FLYBASE:FBgn0004429" /db_xref="SWISS-PROT:P29615" /translation="MKAFLVICALTLTAVATQARTMDRCSLAREMSKLGVPRDQLAKW TCIAQHESSFRTGVVGPANSNGSNDYGIFQINNKYWCKPADGRFSYNECGLSCNALLT DDITNSVKCARKIQRQQGWTAWSTWKYCSGSLPSINSCF" mat_peptide 751..1116 /gene="LysP" /db_xref="FlyBase:FBgn0004429" /product="mature lysozyme P" polyA_site 1295 /note="As determined in RNase protection experiments" BASE COUNT 385 a 335 c 310 g 336 t ORIGIN 1 gaattcgtct gggccagaga aagagctact gccacagcca caaccgtagt catgcagtgc 61 agtttgcact gttcgaatag ctcgaatgcc gcacaatgaa taacgttgaa taattagccc 121 ccacatgcaa ccccacccga gttgcgtgac aggggaccca ccgcggaatg gccaagacaa 181 tgcaatgcct actttattag agataaatat tccgaatagt tgatggaaga cagacttcag 241 ccgacttcaa ccgaatggat ctcttacgca caaagctgag atacgcttca cttcgacgta 301 tttaatgcgt agatcgtccg ctcgagagtg aaggaaccac caccatatct ggtggctaaa 361 gacttccgta tttttggagg tactcgaagt gacgtgcctg ttttgaagca tagtaggagt 421 gattttctag cggctaagat ggtaaacaaa tgataggcta acaacaaaca taacctacag 481 ataagaactt aacttggtgg aacatttaat tcaacgaagg agtgaattga actacctaca 541 ttgtatggga aagccacctt gtttgcaccc taatgatggg taaacagtac tgattgctga 601 ttctaccatg ttgactcaac tgcgaccact tgcatgctct tcggctataa atattttgcg 661 accgctcatc gaattataaa tgaattcagt aagatgaaag cttttcttgt gatttgtgct 721 ctgactctca cagcagtcgc tacccaggcc cgaacgatgg ataggtgttc cctggccaga 781 gagatgtcca aactgggcgt tccccgggac cagctggcca agtggacctg catcgcccag 841 catgagagtt ccttccgcac cggcgtcgtt ggaccggcca actccaacgg atccaatgac 901 tacggcatct ttcagataaa caacaagtac tggtgcaagc cggccgacgg acgcttctcc 961 tacaacgagt gcggcttgag ctgcaatgcc ctcctaaccg acgacatcac gaattccgtg 1021 aagtgcgccc ggaagatcca acgccagcag ggatggactg cttggtccac atggaagtac 1081 tgcagcggat ccctgccctc gatcaacagt tgcttctagt ctcgccccct cccccccctt 1141 cacacactca tactaaatga aagttgttgc caaaggaaga tgagaagaag agttggttga 1201 agtacaaaaa tgtatcttcg agataagtat ctgtgagctg aagacatctt aatcggataa 1261 agtcgaacaa tagccagtta gtgttataaa tcatataact cctcgttgac tttttcgata 1321 ttcatgcact ttaagactca tatttctcga gtgtaattgg ttcgtg // LOCUS DMMDG3 5519 bp DNA INV 12-SEP-1996 DEFINITION D.melanogaster mdg3 retrotransposon DNA. ACCESSION X95908 NID g1542876 KEYWORDS long terminal repeat; mobile dispersed genetic element; retrotransposon; retrotransposon mdg3. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 5519) AUTHORS Avedisov,S.N. and Il'in,Iu.V. TITLE Drosophila retrotransposon mdg3: general structure and functional domains of a full-scale copy JOURNAL Dokl. Akad. Nauk 344 (6), 823-826 (1995) MEDLINE 96109558 REMARK (sites) REFERENCE 2 (bases 1 to 5519) AUTHORS Dzhumgaliev,E.B., Mazo,A.M., Baev,A.A. Jr., Gorelova,T.V. and Arkhipova,I.R. TITLE Structure of long terminal repeats of transcriptionally active and inactive copies of the mobile dispersed gene MDG3 in Drosophila melanogaster JOURNAL Genetika 22 (3), 368-377 (1986) MEDLINE 86165835 REMARK (sites) REFERENCE 3 (bases 1 to 5519) AUTHORS Ilyin,Y.V., Arkhipova,I.R., Gorelova,T.V. and Schuppe,N.G. TITLE Detection of RNA reverse transcription intermediate forms of the mobile dispersed genes mdg1 and mdg3 in Drosophila cells JOURNAL Mol. Biol. 19, 162-172 (1985) REMARK (sites) REFERENCE 4 (bases 1 to 5519) AUTHORS Avedisov,S. TITLE Direct Submission JOURNAL Submitted (16-FEB-1996) S. Avedisov, Engelhardt Institute of Molecular Biol., RAS, Department of Genome Mobility, Vavilov Str., 32, Moscow, 117984, RUSSIA FEATURES Location/Qualifiers source 1..5519 /organism="Drosophila melanogaster" /transposon="mdg3" /db_xref="taxon:7227" /cell_line="67J25D" /clone="Dm38" LTR 1..267 /note="5' long terminal repeat" misc_feature 178 /note="transcription initiation site" /evidence=experimental gene 296..4780 /note="mdg3 element" /gene="mdg3" /allele="" /db_xref="FlyBase:FBgn0002698" CDS 296..4780 /gene="mdg3" /note="orf" /codon_start=1 /db_xref="PID:e223896" /db_xref="PID:g1542877" /translation="MDDKIILNDFSLTTLKDWLRILGQNTEGTKTELIARLQDIPTAV RGDCPPEHPQKNAPPGNDIFSSLDFQNCEINTDHVSVNAMNRKESTETGSERETNMFE LQQLRAELAEAKAMLNGTRSSLQFQEQQQPEQSKATVSSVIQTAQFTQAGATKENTTF HSPQRSNERAESQRFPVDALALAKETITDYDGKTCARAWITVVKNIARTFNIDDNHLR ILLITKLKGNAQVWLHAHPARLIEPIDNLLDQLSLTFGEQSSKAEIRRKFESRKWKTE ENFCSYYDEKMALSNGINIDDDELLDQMIEGIPLQNFRTQARIQCFSTPSEMLRAFSN IRLPARREPPVQPTDYKDAIRCANCNSRGHKADICKKPKREPGSCYACGQLGHLVAQC PTRKSVSSNNYVRWFKINFFENAYKPIISECLIDSGSPISIIKKSLINETMKLALVNT CYFGLNNCILKTHGQTTCYVLKGSIKIYFRLIIVCDQSMRYNVILGRDFLTACNLNLD PYTLGMIALRKPMEINKISMFTENDSPEKSLENEIVSPKSLENEIVSSQSLENEIVSP KSLENEIVSPKSFKNATISPKSLENKIVNQQHKETGPISLRDEIVNQQKNVSKSKLSE DEIVNTSKEIVSFKLPKDKNVYEQLNHNFDKEVLRICHVTESELEYKIGENVSNRLQL EFDRLFRNFYINAKRPNEPTVRSEIQLCLKNPKPFSCSPRRLSYTEKDRLQKLLDEYL ENGFIRPSDSEYASPIVLVKKKTGDLRMCVDFRKLNKMTMKDNYPLPLIDDLLDRMNE KTVFTKLDLKNGFFHVHVKKESIKYTSFVTPLGQYEWLRMPFGLKNAPSVFQRFVNKI FADMIRENKVVVYMDDILLATENINEHLETLKEIFKRLVENKLELRIDKCEFMQSSIK YLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLH DILKKDKPFKFGSEEMICFNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQ KKEDQKWHPVSFFSKRTTDIESKYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNS LILTLSKKELNPRIARWALEFQGYDFEIVHRAGSRMQHVDALSRCTNIMVIQTNSFED NLVICQGKDTKLKEIRQLLENTENKLYEMRNGIVYKKTNENRLLFYVPIEMEEQVLYK YHNELGHVGRDKMIEAIMKNYWFPNLKQKCSTHISNCLKCISFSPKTGKTEGFLHNIP KGNKPFEIIHIDHYGPVDLARPKKHILVIVDAFTKFVRLYATKTTNTKEVIQSLNDYF RAYSRPKCIISDRGACFTSGDFDSFLKECNVKHIKIATGSPQANGQVERINRSLGPMI SKLIEPDQGLHWDLVLEKVEYTLNNTLHRSIKQYPSIMLFGLQQKGQIMDELKEKIEE IGETIEERDLESIRNKGEASQKIAQAYNKEYVDKKRKRSGVFTKGTTSWLKILTQQQA " LTR 5253..5519 /note="3' long terminal repeat" polyA_signal 5462..5467 BASE COUNT 2078 a 1005 c 1029 g 1407 t ORIGIN 1 tgtagtaggc tgcaccttct accctcttcc tttactctta gtcatacata cctaattata 61 catagccaat ctagtcataa gcttatacac tcatacaccc atccttaaca tacaaatatt 121 atcgagaaac ttatcgacta atcgactcgc cactctgcag agagcgcggc agtcagtcgc 181 tgttgaacca agctaaagga cagatcaaaa ataaaagaga cacgtgaaat tgtattagaa 241 tattaacttc tgtaaacggc ggctaaaatc tcagaagtgg gattaataat ccaaaatgga 301 cgataaaatc atcctgaacg acttttcgct gacaacccta aaagattggc tacgtattct 361 gggccaaaat acggagggca caaaaaccga attaatcgcg aggctgcaag acatcccaac 421 ggcagttcgg ggcgattgtc caccggagca cccccagaaa aacgctccac caggaaacga 481 cattttttct tcactggatt ttcagaattg tgaaattaac accgatcacg taagtgtgaa 541 tgcgatgaac agaaaagaat caaccgaaac tggcagtgag agggagacaa acatgttcga 601 gctacagcaa ctacgcgcag agctagcaga agcgaaggca atgcttaacg gaacacgatc 661 gagcttgcag ttccaagaac aacaacaacc agagcaaagc aaggctacag ttagttccgt 721 tatccagacg gcgcagttta cgcaggctgg cgccacaaaa gagaacacaa catttcactc 781 gccgcagcga tccaacgaga gagcggagag ccagcgtttt ccagttgatg ctctcgctct 841 cgccaaagag acgataaccg attacgatgg gaaaacttgc gcgcgtgcct ggataacagt 901 ggtcaaaaat atcgcacgca ctttcaacat cgatgacaac catttacgca tcttactcat 961 cactaaactt aaaggaaacg cgcaagtctg gttacatgcg caccctgctc gattgatcga 1021 accaattgac aatttgcttg atcaattgtc attgactttt ggcgagcaat catccaaggc 1081 tgagatccgg cgaaaattcg agagtcgcaa gtggaaaacc gaggagaatt tctgcagtta 1141 ttacgacgag aagatggctc tctcaaacgg gataaacatc gacgacgacg aactactgga 1201 ccagatgata gagggcatac cgctacaaaa tttccgtacc caagcacgga ttcaatgctt 1261 ctctactcca tcggagatgc tacgcgcatt ttcgaacatc cgtttgccag ctcggaggga 1321 gccacctgta cagccaaccg actacaaaga tgccatacga tgcgcaaact gtaattcaag 1381 aggacacaaa gctgacatct gcaagaagcc caaacgtgaa ccaggttcgt gctacgcctg 1441 tggacaactt ggacacctgg tggcacaatg tcccacaagg aagagcgttt catctaataa 1501 ttatgtaaga tggtttaaaa ttaatttttt tgaaaatgct tataagccca taatttcaga 1561 atgcctcata gactctggca gtcctatatc tatcattaaa aagtcactta ttaacgagac 1621 aatgaagtta gccctagtta atacttgcta ttttggttta aacaactgta ttctcaaaac 1681 acatggacaa accacatgtt atgttttgaa aggatcaata aaaatatatt ttcgtttaat 1741 cattgtttgc gaccagtcta tgaggtataa tgttattctc ggcagagatt ttttaactgc 1801 atgcaattta aatttagacc cgtacacctt gggaatgatt gcgttgagaa aacccatgga 1861 aataaacaaa atatcaatgt ttactgaaaa tgatagtcct gagaaatctt tagaaaatga 1921 aattgttagt ccaaaatcgt tagagaatga aattgttagt tcacaatcgt tagaaaatga 1981 aattgttagc cccaaatcgt tagagaatga aattgttagt ccaaaatcgt ttaaaaatgc 2041 aactattagt ccgaaatcgt tagaaaataa aatcgttaat caacagcata aagaaactgg 2101 tccaatatcg ttaagagatg aaatagttaa tcaacaaaag aatgtcagta aatcaaaatt 2161 atcagaagat gaaattgtta acacttcaaa agaaatcgtt agttttaaat tgccaaaaga 2221 taaaaacgtt tacgaacaat taaatcacaa ctttgataag gaagtactaa gaatatgtca 2281 tgtaactgaa agtgagttag aatacaaaat aggagaaaat gttagcaata ggttacaact 2341 agaattcgat aggttgttta gaaattttta tataaatgca aaaaggccaa atgaaccgac 2401 agttagaagt gaaatacaat tgtgtttgaa aaacccgaaa ccgtttagct gttctcctag 2461 gaggctttca tacacagaaa aagacaggtt acaaaaacta ttagacgaat atttggaaaa 2521 cggatttata cgaccaagcg actcggaata tgcatcgcct attgttttag tgaaaaagaa 2581 aactggagac ttacgtatgt gcgtcgactt tagaaaactt aataaaatga caatgaaaga 2641 caactatcct ctacctctta tagatgactt gttagataga atgaatgaga aaactgtttt 2701 caccaaactc gatcttaaaa acggtttttt ccacgtgcat gttaaaaaag aatcaataaa 2761 atacacctct ttcgttacac cattaggcca atacgagtgg ctgcgaatgc catttggcct 2821 caaaaacgcc ccgtctgtgt tccaaagatt tgttaacaaa atttttgcgg atatgattag 2881 agaaaacaaa gtagtagtat atatggacga cattctattg gcaaccgaaa atataaacga 2941 acacttagaa acgttgaaag aaatttttaa aagattagtt gaaaataaac ttgaattaag 3001 aatagacaaa tgtgagttta tgcaatcaag tataaaatat cttgggttca taataaataa 3061 agacggcata atgcccaatg acaaaggaat cgaggcaata aaaaatttcc caatacctaa 3121 taatgttcat acagtacaaa gttttttggg attatgctca tattttcgac ggtttataaa 3181 agatttttct agactagcta aaccattgca tgacattcta aaaaaagata aaccgttcaa 3241 atttggtagt gaagaaatga tttgttttaa tatgttaaaa gataaattaa tacagtcacc 3301 ggtcttagct atatacaacc ataaacacga aacagaattg cattgtgatg caagttcttc 3361 tggattcggt gctgtactta tgcaaaagaa ggaggaccag aaatggcacc cagtttcatt 3421 cttttcaaaa cggacaacag atattgaatc aaaataccac agtttcgagt tagaaacttt 3481 agccattgtt tattcgttac gtagatttag agtttatctt cattggagga catttaaaat 3541 agtcaccgac tgcaactcat taattttgac cctaagcaaa aaagagctaa accctaggat 3601 agccaggtgg gctttagaat tccaaggtta tgattttgaa attgtgcata gggcaggtag 3661 ccgcatgcaa catgttgacg cactgagtag gtgtacaaat attatggtaa tacaaacaaa 3721 cagtttcgaa gataatctag ttatatgtca agggaaagat acaaaattaa aagaaatcag 3781 gcaattgtta gaaaacacag aaaataaatt gtatgagatg agaaatggta tagtttacaa 3841 aaagacaaat gaaaatagat tgctgttcta cgttccgata gaaatggaag aacaagtgtt 3901 atacaaatat cacaacgaac ttggacacgt aggaagagac aaaatgatag aagctataat 3961 gaaaaactat tggtttccaa atttaaaaca gaagtgtagc acacatatca gcaactgttt 4021 aaaatgtatt tcattcagtc ccaaaacagg aaaaacagaa ggatttctac acaacatacc 4081 taagggaaac aaaccttttg aaataatcca tattgaccat tatggtccag tagacttggc 4141 tagaccgaag aaacatattc tagtgatagt agatgcattc acaaagtttg tcagactata 4201 cgcaacaaaa actacgaaca caaaagaagt catacaatcg ttaaatgact acttcagagc 4261 atacagtagg cctaagtgta tcatatcaga tagaggagca tgtttcacgt ctggcgattt 4321 tgactcattt ttgaaagaat gcaatgttaa acacataaaa attgcaacag gatcgccaca 4381 agccaacggt caagttgaac gtataaaccg aagtcttggt ccaatgatta gcaagttaat 4441 tgaacctgat caaggtctac actgggactt agtcttagaa aaggtcgaat ataccctgaa 4501 caatacacta caccgcagca ttaaacagta tcctagcata atgttatttg ggttacaaca 4561 aaaaggacaa attatggatg agttaaaaga aaaaattgag gaaattggag aaacgattga 4621 agaaagagat ttagaaagta ttagaaataa aggcgaggca agtcagaaaa tagcacaagc 4681 atacaataaa gaatatgttg acaaaaaacg aaaacgatca ggagtgttca caaaaggcac 4741 tacgtcatgg ttaaaaattt tgactcaaca acaggcatag ctaagaagtt aattccaaag 4801 cataaaggac cctatgtcat aagcaaagtt ctcaaaaatg atcgcttcct tctggaagat 4861 gttgatggat ttcaaatttc tcgcaatcct taccggggtg tatggagcat acagaatata 4921 aaacactggc aaagaaaaat taagagtcta caaaatagaa agtataattt gagaaactct 4981 gtacaaaata gaaagtataa tttgagaaac tctgtacaaa atagaaagta taatttaaga 5041 aactctgtac gaaatcgaaa gtataattta agaagcaatt gtaaaacaaa gaaaacaaac 5101 aagaagaaaa gaaaaccaaa aaaatgttta agaccgttca aaagtatctc cactaagaag 5161 aataaaataa gaaacaggac ccttagcttt aagaaacgtt aattgttata aaatcctacg 5221 atcgggagat ctagttgtca ggacggccga gttgtagtag gctgctcctt ctaccctctt 5281 cctttactct tagtcataca tacctaatta tacatagcca atctagtcat aagcttatac 5341 actcatacac ccatccttaa catacaaata ttatcgagaa acttatcgac taatcgactc 5401 gccactctgc agagagcgcg gcagtcagtc gctgttgaac caagctaaag gacagatcaa 5461 aaataaaaga gacacgtgaa attgtattag aatattaact tctgtaaacg gcggctaaa // LOCUS DMMSTBAGE 1071 bp DNA INV 27-JAN-1997 DEFINITION D.melanogaster gene for protamine (mst35Ba). ACCESSION Z46783 NID g608699 KEYWORDS protamine. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1071) AUTHORS Russell,S.R. TITLE Drosophila melanogaster mst35B genes encode very similar protamine like molecules JOURNAL Unpublished REFERENCE 2 (bases 1 to 1071) AUTHORS Russell,S.R. TITLE Direct Submission JOURNAL Submitted (22-NOV-1994) Steven R.H. Russell Dr., Genetics, University of Cambridge, Downing Street, Cambridge, CB2 3EH, U.K FEATURES Location/Qualifiers source 1..1071 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /clone="Gmst35Ba" /clone_lib="EMBL3 genomic" /chromosome="2L" gene 1..1071 /note="Male-specific-transcript-35Ba" /gene="Mst35Ba" /allele="" /db_xref="FlyBase:FBgn0013300" CDS 302..634 /gene="Mst35Ba" /note="genomic DNA for mst35Ba cDNA" /codon_start=1 /db_xref="FlyBase:FBgn0013300" /product="protamine" /db_xref="PID:g608700" /db_xref="FLYBASE:FBgn0013300" /translation="MSTNNVNECKSLWNGIISISAKDESPKGLTEMCNHPIRRAPQKC KPMKSCAKPRRKAACAKATRPKVKCAPRQKCSKQGPVTNNAYLNFVRSFRKKHCNLKP RELIAKAR" intron 684..732 /gene="Mst35Ba" /db_xref="FlyBase:FBgn0013300" BASE COUNT 298 a 225 c 255 g 293 t ORIGIN 1 gtcgggaggc agcttgcaac tgttattaat tatgggcttt gttgcagttg caccgcttgt 61 ctcctgctgt tcagatcttc atcctggtcg gtagggcttg ggctttactt ctggtttgag 121 actcgggttg ctcactgatt aagtgacttc tctaggacgc aactctgcgg cttctggggc 181 caacactcac atgcgggggg actatactcc atcacagttg atggctgaca tcgtacacaa 241 ataaatccca tataaaactt ccctttcctt ttcttttcag attttgtaaa aattttctac 301 gatgagtaca aacaatgtaa atgagtgcaa gagcctgtgg aatggcataa tttccatttc 361 tgcaaaagat gaaagtccta aaggtctcac tgaaatgtgt aatcatccaa taaggagagc 421 acctcaaaaa tgtaagccaa tgaagtcctg tgcaaagccg cgccgaaagg cagcctgtgc 481 caaggcgact cggcccaagg tcaagtgtgc accgaggcag aagtgcagca agcagggacc 541 tgtcactaac aacgcctatt tgaattttgt gcgttccttc cgaaagaagc actgtaactt 601 gaaaccgcgg gaattaattg caaaggcccg ctaaagcgtg ggccaggctc tcggagaata 661 gaaaggatcg ataccgccgg atggtacgta ttttttttat gttatgaaga ctattcattg 721 gtgtcctttc aggcatgcaa ggtcaccacc agtgaacgcc acaagcgccg acggatttgc 781 cagcaatact gagataggaa aaagtctgat gcagttaagt ccaggcatat cctttcctaa 841 cattcgatga atttagaaat aaaaaccaat taacaatcgt gtacttttta ttacgattct 901 aggatgttgg aatagcgcga atgggtattt gtggttgttt ccaggtgccc gtcgaatttc 961 aatttattat tccactatat gagctttcgc acttaatttg catgaataga taatgagctg 1021 tgatccgagg aaatggaacg ggaaaactgc taaggctgag cggtaaatgg g // LOCUS DMNESTED 594 bp DNA INV 21-JUL-1993 DEFINITION D.melanogaster nested gene for putative Sgs protein. ACCESSION X52118 NID g394803 KEYWORDS nested gene; sgs gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 594) AUTHORS Furia,M. TITLE Direct Submission JOURNAL Submitted (14-MAR-1990) Furia M., Univesita' di Napoli, Dipartimento di Genetica, Biologia Generale e Molecolare, Via Mezzocannone 8, 80134 Napoli, Italy REFERENCE 2 (bases 1 to 594) AUTHORS Furia,M., Digilio,F.A., Artiaco,D., Giordano,E. and Polito,L.C. TITLE A new gene nested within the dunce genetic unit of Drosophila melanogaster JOURNAL Nucleic Acids Res. 18 (19), 5837-5841 (1990) MEDLINE 91016924 FEATURES Location/Qualifiers source 1..594 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /chromosome="X" /map="3C11-12 polytene bands" gene 93..416 /note="new glue 1" /gene="ng1" /allele="" /db_xref="FlyBase:FBgn0002933" CDS 93..416 /gene="ng1" /note="nested" /codon_start=1 /db_xref="PID:g394804" /db_xref="FLYBASE:FBgn0002933" /db_xref="SWISS-PROT:P23938" /translation="MKITVVLVLLATFLGCVMIHESEGSTTTTSTSASATTTTSASAT TTTSASATTTTSASATTTTASPSSSSKKKTVTHYKRKVKRPKKVRKITRRRGLRSRNG RRSDE" sig_peptide 93..161 /gene="ng1" /db_xref="FlyBase:FBgn0002933" mat_peptide 162..413 /gene="ng1" /db_xref="FlyBase:FBgn0002933" polyA_signal 439..444 BASE COUNT 181 a 165 c 112 g 136 t ORIGIN 1 aaacccagtt gagaagacta ctataaaagc tggcttcgtt ccttcaagac agcatcagta 61 gcaaggtcaa tctattgtag catttgctca ccatgaagat caccgtggta ctggtacttc 121 tcgccacctt cctcggctgt gtgatgatcc acgagtcgga ggggtccaca accaccacgt 181 ccacctccgc ctcggccact accactactt ccgcttcggc gaccaccact acttccgcct 241 cggccaccac caccacttcc gcttcggcca ccacaacaac agcctcacct tcctcgagct 301 caaaaaagaa gactgtcact cactataagc gaaaggtcaa gaggccaaag aaggtcagga 361 aaatcacaag gagaaggggt ctcaggagcc gcaatggtcg cagatccgat gaatgaaaga 421 tccacaggac caataggaaa tccactccaa tccaatgctg aacccaatga caaccatagc 481 acttaacttt tgaatagttt ataatgaaat agcaatattg ttcgtttata ggcaaatata 541 taaatcaatc aatagtattc tcatgtgatt ctgcattttc aatcagttaa tgtt // LOCUS DMNEU 3299 bp DNA INV 30-JUN-1993 DEFINITION Drosophila neu mRNA. ACCESSION X61617 S58394 NID g11024 KEYWORDS neu gene; neuralized gene; neurogenesis. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3299) AUTHORS Boulianne,G.L., de la Concha,A., Campos-Ortega,J.A., Jan,L.Y. and Jan,Y.N. TITLE The Drosophila neurogenic gene neuralized encodes a novel protein and is expressed in precursors of larval and adult neurons JOURNAL EMBO J. 10 (10), 2975-2983 (1991) MEDLINE 92007742 REMARK Erratum:[EMBO J 1993 Jun;12(6):2586]] REFERENCE 2 (bases 1 to 3299) AUTHORS Boulianne,G.L. TITLE Direct Submission JOURNAL Submitted (13-JAN-1992) Boulianne G.L., University of Toronto, CRND-Tanz Neuroscience Building, 6 Queens Park Cresent, Toronto, Ontario M5S 1A8, Canada FEATURES Location/Qualifiers source 1..3299 /organism="Drosophila melanogaster" /strain="Oregon-R" /db_xref="taxon:7227" /dev_stage="embryo" /clone_lib="lambda gt10, Kauvar E6-8" /chromosome="3R" /map="85C" exon 1..545 /number=1 gene 274..1509 /note="neuralized" /gene="neur" /allele="" /db_xref="FlyBase:FBgn0002932" CDS 274..1509 /gene="neur" /codon_start=1 /product="neuralized protein" /db_xref="PID:g11025" /db_xref="FLYBASE:FBgn0002932" /db_xref="SWISS-PROT:P29503" /translation="MGLSDIPANYMQGSHPHLTLHPQQQHHQNQQHLQHLQQMQQLHN AMPTPAQQAAQVLAMESNELLMSTKDKLSSKKKMHLLKKIKKRFGLVRRSPSSCPGPN NLPPLQFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNNW NGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAG DVIYGINNEEKGVILSGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMAT VPAQQQQMPQPAANASSALNSHHPHQQSRRSLPGHTAAIEHDLERHVMPSLQSLHLAG NGGSVASVEQAAIAHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTE SDFCQGYVFTARPFALVRS" exon 546..2294 /number=2 exon 2295..3299 /number=3 BASE COUNT 871 a 863 c 785 g 780 t ORIGIN 1 aaaaaaaact cagcgaaagg ttgtctcgaa gttgtcgtcg tcggtctttg tgtttcgtat 61 cgtttcgttt cgtttgttcc cgttgcgcgc agacaaacaa ccaaccaaat tcaaaatgtt 121 ttaacggaaa acattcaaat tcgaagaaga actctatcgc taaatttaat gccaaataaa 181 atacgcagct tgtgcatttt cattagcatt acgcgtgttc gtttagttcg tctgttttaa 241 tttaaataac gaaataagaa ataatccact accatgggtc tatcggatat accagccaac 301 tatatgcagg gcagccatcc gcacctaact ctccatccgc agcagcagca ccaccagaat 361 cagcagcact tgcagcatct gcaacagatg cagcagctgc acaacgccat gcccactccc 421 gcccagcagg ccgcccaggt cctggccatg gagtccaacg agctgctcat gagcaccaag 481 gacaagctct ctagcaagaa gaaaatgcac ttgctcaaga agatcaagaa gcgctttgga 541 ttggttcgcc gctcaccctc ttcatgtcct ggccccaaca acctgcctcc gctgcaattc 601 cactccgtac atggcgacaa catccgaatt tcaagggacg gaaccctggc ccgtcgcttt 661 gagagcttct gcagggccat caccttttca gcgcgtccgg ttcgcatcaa cgagaggatc 721 tgcgtgaagt ttgctgagat ctcgaacaac tggaacggtg gaattcgctt tggattcacc 781 agcaacgatc ctgtaacgct ggagggaacg ctgcccaagt acgcctgtcc ggatctgacc 841 aacaggcctg gcttctgggc caaggctctg cacgagcagt actgcgagaa ggacaacata 901 ctttactact atgtcaatgg agctggcgat gtgatctatg gtataaacaa cgaggagaag 961 ggtgtgatac tgtccggcat cgatacgaga agcctgctgt ggacggtgat cgatatctat 1021 ggcaactgca cgggcattga gtttctcgat tctcgcattt acatgtacca gcagcagcca 1081 gcggctatac caatggccac tgtgcccgcc cagcaacagc aaatgcccca gccagctgcc 1141 aatgcctcct ccgccctgaa ttcccatcac ccgcatcagc agtcgaggag atccctgcca 1201 ggacacactg cggccatcga gcacgatctg gagcgccatg tgatgccgtc cctgcaatcc 1261 ctgcacttgg caggaaacgg tggaagcgtg gctagcgtag aacaggcggc cattgctcat 1321 gatttggcga atggactgcc tcctctgcgc tacaatgcca acggacgact gattccagtg 1381 cccttccaca acaccaaggg ccggaatgtg cggctctcgc aggatcgctt tgtggcttct 1441 cgtacggaat ctgacttctg ccagggatat gtgttcactg cccgtccatt cgcattggtg 1501 agaagctgat tgtgcaggtc ctgaaaacgg aacagatgta cgtgggtgcc ttggctttgg 1561 gtctgacctc ctgcaatccg gccatgttgc agcccaatga tttgcccaat gattcggatt 1621 tcctgctcga tcgccccgag tactgggtgg tgagcaagga tattgcagct gctcctcagc 1681 gcggcgatga gattgccttc ttcgtggcgc cgaacggtga agtgagcatc agcaagaaca 1741 acggaccagc tgtggtggtg atgcatgtgg accagtccct ccagctgtgg gccttcctgg 1801 atgtctacgg ctcgacgcag tctgaggatg ttccgccagc agttacccaa catggttgcg 1861 tatccatcgc agccgcaggt gaatgtgaat gccagcagct cgtccgcctg caacgctgcc 1921 tccacgtccc tccacgtccc tcatgctgcc catgaccgag tcgatgagca gtctgaatgc 1981 cggagccact gccaagctgt tgcatcatcc ctcgcagctg agcgtagccc agagtacgag 2041 caatttggcc tcagctggcg gagtcaatgg cagccgcatg atcagcatgc cctccaacgg 2101 agatattctc cagatccagc cgaatggtgg tggcaccgtt ctggtggtca acctgccacc 2161 tgctagcagc tcgcacgata taaacggcca actcgcggcc aggccaacgg ccacggtaac 2221 ctccagcggt gttctggccg gagcctgctc cagcggcacc cttatcagca ccaccagcag 2281 ccagtacatt gagcagccca tggccaatag cacaaataat gcggccaaca agtggaagga 2341 cagcctgagc gaccagcaga gaaccgattc gagtgccgaa tgcacctacg tcatcgagaa 2401 tccatcgact cggtgctgat catgtgcgga cacatgtgca tgtgcatcga ctgcgccatc 2461 gagcagtggc gcggatgggg tggtggccag tgcccactgt gccgggcggt gatccgggac 2521 gtcatccgca cctacaccac gtagaaaggt cgcgggcgtt tcctagccaa gcaacattta 2581 ctcgcaatca aacctactaa agctacacat tataccatac acacaagttg ttgcatttaa 2641 gcgcaattga gcgcaaagaa tattatattg gagagatagg cattattttt gcagactaaa 2701 gattagatag tttacgcagc tagattagtg tatgaacata tcaactaatt tatcacacgt 2761 atgtttaatt tttttgtgat gttataagta agtgcgcccc agagccaaaa ctatgtattg 2821 ttcaatccaa caaagatatc ttcgtttttt caattttttt caaaccttga atcgcccatt 2881 tgtgcattgt atactgaaaa accaaagtat tgtataggag tttatagtat tttgaattta 2941 aattggaatt aattgaaagt tgttgcaaat ttacttagtt tttctctatg tctaaattcc 3001 aaacgatgtg caaaaggaac aaacacaaac tacaaggatt ctttatttgg cgattaatca 3061 ttttggtgct aaatgttttg aaaggcaaaa taaaattgtt aacggatttg aaaagttatg 3121 tttaagcttg cagcaactac gaatgacctt aatttgatat gaaatcacaa gaagcaaaat 3181 attgactact ttccagcaag gaaatggata tcgacgcaac tcaaataagt ttgcagcaca 3241 aattaatgaa caaagattga tcagaaaaca cttatgcacg taaccaaaat agaaaactg // LOCUS DMNG4 1525 bp DNA INV 21-JUL-1993 DEFINITION D.melanogaster ng-4 gene. ACCESSION X67501 NID g296043 KEYWORDS ng-4 gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1525) AUTHORS Furia,M. TITLE Direct Submission JOURNAL Submitted (22-JUL-1992) M. Furia, Dipartimento di Genetica, Biologia Generale e Molecolare, via Mezzocannone 8, 80134 Napoli, ITALY REFERENCE 2 (bases 1 to 1525) AUTHORS Furia,M., D'Avino,P.P., Crispi,S., Artiaco,D. and Polito,L.C. TITLE Dense cluster of genes is located at the ecdysone-regulated 3C puff of Drosophila melanogaster JOURNAL J. Mol. Biol. 231 (2), 531-538 (1993) MEDLINE 93287124 FEATURES Location/Qualifiers source 1..1525 /organism="Drosophila melanogaster" /strain="Oregon-R" /db_xref="taxon:7227" /dev_stage="adult" /chromosome="X, 3C11-12 polytene bands" TATA_signal 218..224 /gene="ng4" /db_xref="FlyBase:FBgn0010296" gene 218..514 /note="new glue 4" /gene="ng4" /allele="" /db_xref="FlyBase:FBgn0010296" CDS 276..449 /gene="ng4" /note="ng-4" /codon_start=1 /db_xref="PID:g296044" /db_xref="FLYBASE:FBgn0010296" /db_xref="SWISS-PROT:P40141" /translation="MEWKLLLIVLPWLLVCKIFYKVEDFTEPDVAYQSIDYHPEDYID SFTDFQKHDYFQY" polyA_signal 509..514 /gene="ng4" /db_xref="FlyBase:FBgn0010296" BASE COUNT 522 a 248 c 252 g 503 t ORIGIN 1 gcttggccac ttactttccc ccattttcga ttcttttttt tttttcgccc gcctgaaagt 61 attccactgg cggctggctg tgcggatgaa agtgggttag tcacatattt gagcttgtac 121 agggacagac gccagctgca caaactgacc cacatcctgg ctgtgtggct atatagctat 181 atggctatat ggaagcttta tacattttag cttcccctta attagtactt cgtcggtcat 241 cgcagaaacc gctgttattt tggacgagag agataatgga atggaaactg ctgctgatag 301 tcctgccctg gctgctcgta tgtaaaattt tttataaggt cgaggacttt acggagcctg 361 atgtcgctta ccaaagcatt gactatcatc ccgaggacta catcgattcc ttcaccgact 421 ttcagaagca tgactacttt cagtattgag agtatgctag tgtttccttt ttgtttaatt 481 tttttttttt gtttgttaaa aagtcttgaa taaagcgttg tgtatgttga atattaatta 541 agcgaatata tctttatcta tgataaacta atggacaaaa ttggaacgta atgttgaaaa 601 atatgatctt gctcaggttt ggtttgcatt tatctgtgcg atcaaattaa aaaatctcaa 661 gttaagtaat caaattgaaa acataattaa agggtaaata ttaatcaatg gctttaaaac 721 gtaaatatta atcgttggat ttaaagggta aatattaatc aaacaattgt ttagcaaaaa 781 catgatccta tcatcagtct attattattt aaacagactt gtgggaaaga ccaaaatggt 841 catagactgg gttattatag aaaataattg tacagaccag ctaaatttat actacgccac 901 atagataaaa catctttgaa caagtgaaag agaaagttcg catacatttt tgcatttaaa 961 tataatcaag caaaaatatt caaatattta aacaattgac agaaaaccca tttgcaatgg 1021 ttcaaatata caatagtatt caattgtaga cgacgccagt tgacctcgaa aacatagcaa 1081 tctttattgc ttaccaaaat ttttgcattc ggatatttgc gaagtccaaa catgaatgct 1141 acataagcta aggtaaacaa attaagcatt atacgtttta agttaatctc tattttttgt 1201 ttgttcaaga gacaaaagca gcacaaaaca cagctttttt tttgtagcac acttttgcgg 1261 gatgattgtt tattaaagct ttcattttat aagtgagaaa agttactaac ctaaatgata 1321 tatgagcgaa agatcataca attcttagaa ttttgaaaat gcaactatga tcagccgtaa 1381 tattactaaa taaatacata taattaacac aaactttttc aactactgat aactttacat 1441 tcagtcaatc tgtcaaccaa aaaaaaaaaa acattaactg attgaaaatg cagaatcaca 1501 tgagaatact attgattgat ttata // LOCUS DMNULLOG 972 bp DNA INV 10-AUG-1992 DEFINITION D.melanogaster nullo gene. ACCESSION X65444 NID g8300 KEYWORDS nullo gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 972) AUTHORS Rose,L. TITLE Direct Submission JOURNAL Submitted (03-APR-1992) L. Rose, Genetics and Development, Biotechnology Bldg, Cornell University, Ithaca NY 14853, USA REFERENCE 2 (bases 1 to 972) AUTHORS Rose,L.S. and Wieschaus,E. TITLE The Drosophila cellularization gene nullo produces a blastoderm-specific transcript whose levels respond to the nucleocytoplasmic ratio JOURNAL Genes Dev. 6 (7), 1255-1268 (1992) MEDLINE 92331931 FEATURES Location/Qualifiers source 1..972 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="0-4 hour embryo" /clone_lib="charon 4" /chromosome="X" /map="polytene bands 6F1-2" TATA_signal 36..41 prim_transcript 67..>816 gene 175..816 /note="nullo" /gene="nullo" /allele="" /db_xref="FlyBase:FBgn0004143" CDS 175..816 /gene="nullo" /function="actin-myosin network stability during cellularization" /codon_start=1 /db_xref="PID:g8301" /db_xref="FLYBASE:FBgn0004143" /db_xref="SWISS-PROT:P32845" /translation="MGSTHSAEKVKSVEDSTSPANPGIFCTPLPGFISKIQRLVLRKL SISARKQKRLNKRSKHLLRPMPRCSSFGSCGTLLTPTKKSASNIADRRYAQWKCSFEH LAQKQPRLHDISEAMTGQTTPRGFPSHTDPKRCLMVMDSSSPESPLYDMVGGQKVRRR LSLRSHALVRRPSARQKAEQAKLDAQFQRDLRDLEDYYGGFHFAQRRERLVKV" polyA_signal 895..901 BASE COUNT 267 a 277 c 209 g 219 t ORIGIN 1 ggtacctgat cctttcagat tttcggtatt ttcggtatat atgcccgccg ctcgatggca 61 atcagcatca gttgtccaac aacagttaca ccgctaacaa cgttctccaa aacaatatta 121 tatatattaa tatattacga acttgtgact ataccattct caagaaatct caaaatgggc 181 agcacacatt ccgctgagaa ggtaaagagc gtcgaggact cgaccagtcc tgcaaatcct 241 ggcatcttct gcactcccct gcccggtttt ataagcaaaa tccagagact cgtcctccgc 301 aaactgagca tctcggccag aaaacaaaag cgactaaaca agcgctccaa gcatctcctg 361 cgccccatgc cacgctgctc gtccttcgga tcctgcggca ccctactgac gcccaccaag 421 aagtccgcat ccaacatagc cgatcgccgc tacgcccaat ggaagtgcag tttcgagcat 481 ctggcccaaa agcagccgcg tctccatgac atcagcgagg ccatgaccgg acagaccaca 541 ccacgcggct tcccctccca cacggatccc aagaggtgtc tgatggttat ggactccagt 601 tcgccggagt caccgctcta cgacatggtc ggtgggcaga aagttcgccg ccgcctgagt 661 ctgcgcagcc acgcccttgt gcgacgccca tcagcccgcc agaaggccga acaggccaag 721 ctggacgccc agtttcagcg ggatctgcgc gatctggagg attactacgg tggattccac 781 tttgcccagc gccgcgagcg attggtgaag gtttaagata agataaaaag attaacatag 841 agccatttgt atagccaata ttgtgatagc tcgtaagccc aaaaaaaagt tctgaataaa 901 attcatattg aaaatcaaac tgaaaaagta gcccacttta ttatttattc gtttattcat 961 atttattagt ta // LOCUS DMPP1 1913 bp DNA INV 30-NOV-1993 DEFINITION D.melanogaster gene for protein phosphase 1. ACCESSION X55198 S47852 NID g8361 KEYWORDS protein phosphatase; protein phosphatase 1. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1913) AUTHORS Dombradi,V., Axton,J.M., Barker,H.M. and Cohen,P.T. TITLE Protein phosphatase 1 activity in Drosophila mutants with abnormalities in mitosis and chromosome condensation JOURNAL FEBS Lett. 275 (1-2), 39-43 (1990) MEDLINE 91085574 REFERENCE 2 (bases 1 to 1913) AUTHORS Dombradi,V. and Cohen,P.T. TITLE Protein phosphorylation is involved in the regulation of chromatin condensation during interphase JOURNAL FEBS Lett. 312 (1), 21-26 (1992) MEDLINE 93050155 FEATURES Location/Qualifiers source 1..1913 /organism="Drosophila melanogaster" /db_xref="taxon:7227" CAAT_signal 53..57 TATA_signal 298..304 gene 687..1595 /note="Protein phosphatase 1 at 87B" /gene="Pp1-87B" /allele="" /db_xref="FlyBase:FBgn0004103" CDS 687..1595 /gene="Pp1-87B" /codon_start=1 /product="protein phosphase 1" /db_xref="PID:g8362" /db_xref="FLYBASE:FBgn0004103" /db_xref="SWISS-PROT:P12982" /translation="MGDVMNIDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIF LSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI CLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLPVA AIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND RGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDN AGAMMSVDDTLMCSFQILKPADKRKK" polyA_signal 1723..1728 BASE COUNT 522 a 496 c 441 g 454 t ORIGIN 1 tgaattaacc tatgttctgt aaacgaatat tcttattggc ttatttgaat ttccaatgta 61 tttaaatatc cccttgttac cggtatatcg aatagcctcg ccaaatgcat cagtctccca 121 tctcttttcc acagtaagtc atgccaggcg tgcctgagtg caagcgggat ggctagtgtc 181 cccctgatca ggctgccaca ccgctgaaat agagtaactg gacgccatgc gtttaatcga 241 ttactaacag cagtttcgag ccactatagg gtcgagaaga cccgtttcga atgaaaatat 301 aaaagtagag ctattgcgga actcttgcaa tggattggaa atgtccttaa tgtaataaga 361 gtaatattac agcaacttcg ttatcgatta tgcactatat ttgcatgtta tcgattagat 421 aagatggcgt ctattatctg gccatatccg cgacttccgg cagtgtggca acatcagcta 481 gaagcacact cgccatcccg cccgcactca cgcaacagca tacgaagaaa ttttcatact 541 tgttagctgt gaaaagtatt tagcagaaat agatttcgga aattaaagat ttcgaggcta 601 tttcggcgct accaacgatc gttcgcggta acctcgacac ccaacagcag cactagtgca 661 ccagatccac actttcgcac gcaaacatgg gcgacgtgat gaatatcgac agcataatat 721 cgcgacttct cgaggtgcgt ggggcacggc caggtaaaaa cgtacagctc tcggagggcg 781 agatccgggg actttgcttg aagtcgcgcg agatcttcct gtcgcagccc attctgctcg 841 agctagaggc accgttgaag atctgcggcg acatccatgg acagtactac gatctgttgc 901 gtctgttcga gtacggcggc tttccgccgg aatcgaatta cctgttcctc ggcgactacg 961 tcgatcgcgg caagcaatcg ctggagacga tctgcctgct gctcgcctac aagatcaaat 1021 actcggagaa tttcttcctg ctgcgcggca accacgaatg cgccagcatt aatcgcatat 1081 acggattcta cgacgaatgc aagcgtcgct acagcatcaa gttgtggaag acattcacgg 1141 actgcttcaa ctgcctgcca gtggcggcca ttgtcgacga gaagatcttc tgctgccacg 1201 gtggtctcag tcccgatttg acctccatgg agcagatccg tcgcattatg cggccaaccg 1261 atgtgcccga ccagggactg ctgtgcgatc tcctgtggtc cgatcccgat aaggatacca 1321 tgggctgggg cgaaaacgac cgcggcgtta gcttcacctt cggtgccgag gtggtggcca 1381 agtttttgca gaagcacgag ttcgatctca tctgccgagc ccatcaagtc gtcgaggatg 1441 ggtacgagtt ctttgccaaa cgcatgctgg tcaccctgtt ctcggcgccc aactactgcg 1501 gcgagttcga caatgccggc gccatgatgt ccgtggacga tacgctgatg tgctcgttcc 1561 aaatcctcaa gccagccgac aagcgtaaaa agtaatatca cacaactgca gcaccacgag 1621 cagtcttttt ctatctaaaa cagatcaata agaaatccaa acaagataca aaagataaac 1681 acgacaaaaa caaccacaaa cccaaccaca caatcaacca gaaataaaat cctttgaaac 1741 aacacatcaa atgatgcatg aaacgtaagt atgggctgct gacgcagagt aacaaactag 1801 tgaatcacac tctcacccca accttatctc tgtttttggt cacttttatc atcggcagcc 1861 ggggcgagtc gaaatccaca agaaattgca ccattaattt ggtatggaat agc // LOCUS DMRAS3 682 bp DNA INV 12-SEP-1993 DEFINITION Drosophila Dras3 gene. ACCESSION X02200 NID g8407 KEYWORDS cellular oncogene; ras cellular oncogene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 682) AUTHORS Schejter,E.D. and Shilo,B.Z. TITLE Characterization of functional domains of p21 ras by use of chimeric genes JOURNAL EMBO J. 4 (2), 407-412 (1985) MEDLINE 85257468 COMMENT Data kindly reviewed (18-AUG-1986) by E. Schetjer. FEATURES Location/Qualifiers source 1..682 /organism="Drosophila melanogaster" /strain="Daekwanryeong" /db_xref="taxon:7227" CDS 60..608 /note="Dras3 polypeptide" /codon_start=1 /db_xref="PID:g8408" /db_xref="FLYBASE:FBgn0004636" /db_xref="SWISS-PROT:P08645" /translation="MREYKIVVLGSGGVGKSALTVQFVQCIFVEKYDPTIEDSYRKQV KVNERQCMLEIVNTAGTEQFTAMRNLYMKNGSDSCWSTRSRRNRRLTICRTREQILRV KDTDDVPMVLVGNKCDLEEERVVGKELGKNLATQFNCAFMETSAKAKVNVNDIFYDWS GRSTRSRPRRNRRSRKVPCVLL" BASE COUNT 219 a 158 c 192 g 113 t ORIGIN 1 tagaatttag cacaaaacaa gagatatacg aaggatatac aaacagcaca gcagccagca 61 tgcgtgagta caaaatcgtg gtcctcggaa gcggcggcgt gggcaaatcc gcgctgacgg 121 tccagtttgt ccagtgcatc ttcgtggaga agtacgatcc caccatcgag gacagctaca 181 ggaagcaggt gaaggtgaac gaacgccagt gcatgctgga gatcgtgaac acggcgggta 241 cggagcagtt cacggccatg cggaatttgt acatgaagaa cggcagcgat tcgtgctggt 301 ctactcgatc acggcgcaat cgacgtttaa cgatctgcag aacgcgcgag cagatactcc 361 gggtgaagga cacagacgat gtgcccatgg tgctcgtggg caacaagtgc gacctcgaag 421 aggagcgcgt cgtcggcaag gagctgggca agaacttggc cacccagttc aactgcgcct 481 tcatggagac ctcagccaaa gccaaagtga atgtgaacga tattttctac gactggtccg 541 gcagatcaac aagaagtcgc ccgagaagaa acagaagaag ccgaaaagtt ccatgtgttc 601 tgctataaga cttccaaaaa ccaacaaaac taaaaaacaa aaaaaaaata tatagcagag 661 gaggaggaga gaggagcaaa ac // LOCUS DMREPDNA2 1750 bp DNA INV 27-JAN-1994 DEFINITION D.melanogaster (Canton S) repeat region DNA. ACCESSION Z29571 NID g452249 KEYWORDS direct repeat; repeated DNA. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1750) AUTHORS Samant,S.A., Patki,A.H. and Deobagkar,D.N. TITLE Characterization of mosquito (Anopheles stephensi) genome JOURNAL Unpublished REFERENCE 2 (bases 1 to 1750) AUTHORS Deobagkar,D.N. TITLE Direct Submission JOURNAL Submitted (17-JAN-1994) Deobagkar D. N., University of Poona, Department of Zoology, Ganeshkhind, Pune, Maharashtra, INDIA, 411007 FEATURES Location/Qualifiers source 1..1750 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone="pDdm1.7" /clone_lib="derived from Lambda Dm56" /chromosome="left arm of the second chromosome of D. melanogaster." gene 1..1750 /note="Larval serum protein 1 &bgr" /gene="Lsp1&bgr;" /allele="" /db_xref="FlyBase:FBgn0002563" repeat_region 16..43 /note="(CAGA)n, n=6 :reported as hypervariable minisatellite DNA sequences, a probable recombination hot spot." /rpt_type=DISPERSED /rpt_unit=16..20 repeat_unit 22..32 /gene="Lsp1" /note="This sequence is also repeated between nucleotide no. 34 to 44." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 117..125 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 838-846." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 138..146 /gene="Lsp1" /note="This sequence is also repeated between nucleotide no. 721-729." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT TATA_signal 289..295 /gene="Lsp1" /db_xref="FlyBase:FBgn0002563" repeat_region 364..393 /note="(TG)n REPEAT; (TG)n, n=3,4 at nt. no. 962-969 and 1160-1165. The (TG)n motif is :1) capable of adopting Z-DNA structure 2) potential recombination signal with (CAGA)n, n=5,6." /rpt_type=DIRECT repeat_unit 436..444 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 931-939." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT CDS 450..818 /gene="Lsp1" /codon_start=1 /db_xref="FlyBase:FBgn0002563" /product="unknown" /db_xref="PID:g452250" /db_xref="FLYBASE:FBgn0002563" /translation="MASNLPTHSAPEHHYQGLLCCLFYRLQIFVWLQLISGCTCSSPR PAKPFGPLARAINNAFASPRWPRHRISPTAPFAKETPCHLVAVSFFKPLGLRKPQAKQ ADKVKSSHMSEFAYTRNYDR" repeat_unit 489..497 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1281-1289." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 528..536 /gene="Lsp1" /note="This sequence is also present between nt. no.715-723." /db_xref="FlyBase:FBgn0002563" /rpt_type=INVERTED repeat_unit 716..724 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 904-912." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 766..774 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1500-1508." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 847..855 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1257-1265." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 964..972 /gene="Lsp1" /note="This sequence is also present between nt. no. 1158-1166." /db_xref="FlyBase:FBgn0002563" /rpt_type=INVERTED repeat_unit 970..978 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1086-1094." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT polyA_signal 1004..1009 /gene="Lsp1" /db_xref="FlyBase:FBgn0002563" repeat_unit 1223..1233 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1266-1276." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1352..1360 /gene="Lsp1" /note="This sequence is also present between nt. no. 1656-1664." /db_xref="FlyBase:FBgn0002563" /rpt_type=INVERTED repeat_unit 1419..1433 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1668-1682." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1576..1586 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1594-1604." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1576..1588 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1588-1600." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1578..1590 /gene="Lsp1" /note="This sequence is repeated between nt. no. 1590-1602." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1579..1591 /gene="Lsp1" /note="This sequence is also repeated between nt. no. 1591-1603." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT repeat_unit 1580..1592 /gene="Lsp1" /note="This sequence is also repeated between nt.no. 1592-1604." /db_xref="FlyBase:FBgn0002563" /rpt_type=DIRECT misc_recomb 1646..1656 /gene="Lsp1" /standard_name="Nakamura sequence" /note="Nakamura sequence found in human genome is present with two mismatches in this sequence. Implicated as a recombination hotspot." /db_xref="FlyBase:FBgn0002563" /organism="Homo sapiens" BASE COUNT 498 a 373 c 411 g 468 t ORIGIN 1 gagctcaaac ggcagcagaa gcagaaacag aaacagaaac agaagtccac tgaattgcat 61 aatttgatta aaatattacg gcgtatttat tcttgggccc gttttcactt ttctgcccaa 121 atcgaatatt tcatgcgaac cgctcgaaat attttccagc ggttgacccc aagggaaaat 181 ctgatgggga ggaaggcgga aaagggcaac cattgctgac tcggaaaatg gcggcggaga 241 tatgtacaag cagacaacca aaaagtagtt tggtgtaaat ttacatttta tattaaagtg 301 acgcagctgt cgtttcggtt tttgctccga gcaaaatgag tttttaagcg ctttccctcc 361 tcatgtgtgg gtgtgtgtgt gtgtgtgtgt gtgaaaccgc agaaatcaag gcaaaggaca 421 acatttctgg gtggattcct atttgaagga tggcatctaa tttacctact cattcggcgc 481 ccgaacatca ttatcaagga cttctgtgct gccttttcta ccgattacaa atttttgtgt 541 ggctgcaact aattagtggc tgcacctgct catcaccgcg tcccgcaaaa ccctttggtc 601 ctttggctcg ggccattaat aatgctttcg catctccgcg ttggccacgt catcggatat 661 cgccgactgc cccttttgcg aaggagactc cgtgtcatct ggtcgccgtc tcatttttta 721 aaccgctcgg tctgcgaaaa ccccaagcca aacaagctga taaagttaaa agcagccaca 781 tgagtgagtt tgcttacacg cgaaactatg atcgttaatc aaaatgcatg taattatcca 841 aatcgattaa ttcattgatt aagcatatgg tttaaagcat attcatactt acaagttaaa 901 tagttttaaa ccataatcta tacaatctgc ttcctatttc tcgcagtgca ggcctgtgcg 961 agtgtgtgtg cggcatgacg gtcagcaagc gacaaagcac acgattaaat tacaaaatgt 1021 caataacgat aacgaaatga aattgattga aacgagtggc gaccacacaa tggatgcaac 1081 atcccgcggc atgagtacgt ttatatagtg tgctcccgga cctggacatc gtcattccct 1141 gtcgcgtgat aaatgatgcg tgtgtgcttg agtggatgac accttgccga tatggcagat 1201 atgcgccgca caatggcatg tcaattaaaa tgcccggatg ttgaaatcat tcgcaattaa 1261 ttcataatta aaatgcgaca cattatcaaa agtgtgcagc ggggtggtat ttacacaaat 1321 tgcgaatgaa tattttatga ggttcatcgg gttcagttcg ttcacttggg aaaaactagt 1381 ttggtgttcc ggccagcaca cctcaagttc ccccggttca actggtcctt cgcaatggtg 1441 cggacatttt tcgggggctt ccaactttgg cagcccggag cgagaacaat gaaatgcact 1501 taaaagcatt tagttgttgc gacaaaattt gcagcacaga aatgcggttg ccgaaagcag 1561 gaaaatgaga gtgggagtgg aagtggaagt ggaagtggaa gtggccaatc ctttgcaaat 1621 aatgtgcgtg cataaacaaa aagcagggcg agggggcttg acttcggcaa ctggtccttc 1681 gcttacatag atacacgcag atgaggtcct gctccttcca aattagcgcc ataaagtatg 1741 caacaagctt // LOCUS DMRH92CD 2500 bp DNA INV 12-SEP-1993 DEFINITION Drosophila R7 photoreceptor cell opsin gene. ACCESSION Y00043 NID g8437 KEYWORDS opsin; photoreceptor; Rh62CD gene; rhodopsin. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2500) AUTHORS Fryxell,K.J. TITLE Direct Submission JOURNAL Submitted (17-MAR-1987) Karl J. Fryxell, Division of Biology, 156-29, Pasadena ca 91125 REFERENCE 2 (bases 1 to 2500) AUTHORS Fryxell,K.J. and Meyerowitz,E.M. TITLE An opsin gene that is expressed only in the R7 photoreceptor cell of Drosophila JOURNAL EMBO J. 6 (2), 443-451 (1987) MEDLINE 87218500 FEATURES Location/Qualifiers source 1..2500 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /clone="nDm6030" gene 1..2500 /note="Rhodopsin 3" /gene="Rh3" /allele="" /db_xref="FlyBase:FBgn0003249" precursor_RNA 585..2194 /gene="Rh3" /note="primary transcript" /db_xref="FlyBase:FBgn0003249" CDS 607..1758 /gene="Rh3" /note="opsin (AA 1-383)" /codon_start=1 /db_xref="FlyBase:FBgn0003249" /db_xref="PID:g8438" /db_xref="FLYBASE:FBgn0003249" /db_xref="SWISS-PROT:P04950" /translation="MESGNVSSSLFGNVSTALRPEARLSAETRLLGWNVPPEELRHIP EHWLTYPEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAF CDFMMMVKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVIT RPMEGKMTHGKAIAMIIFIYMYATPWVVACYTETWGRFVPEGYLTSCTFDYLTDNFDT RLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLRSNVDKNKE TAEIRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACID PFVYAISHPRYRMELQKRCPWLALNEKAPESSAVASTSTTQEPQQTTAA" polyA_site 2194 /gene="Rh3" /note="polyA site" /db_xref="FlyBase:FBgn0003249" BASE COUNT 704 a 597 c 551 g 648 t ORIGIN 1 gtcgactgaa ccacctcgtt ccatatggag aagtctacga gttcaagttt aatggagcag 61 ctgactgcac tgaattttgt agtttaatac acaaatccgc aaattgcatc tcacttcaaa 121 tagcctggta catagtttct actaacataa ctcatattaa aataaagcaa ccaaccagag 181 ggccgaagtt ctattaataa aactaatatt taactattat atatacattt tatttacttg 241 gtaagcttat gataaccttc gaaagagaac aaacacaata cgctttgtca tttgaaaaat 301 aaatttgctg taactacttt acaaggtgaa actcttgtca gaagataaga ggctaggtaa 361 gttgattatt caatcagttt acttactgca acccaaaatg gtcactgcac taaccttcag 421 atgagctgca ctacaccctc aatcgagaat caatgcaaac gcagtgccag cgaaaatgtc 481 agcaagggat taggccaatc ccaaacgggt aatcccgctg cgacaatgct aatccaattc 541 cgatgggccg tataaaagcc ccaagctggg ctggctgtga tttcgtcttg gcccgcagac 601 cggagcatgg agtccggtaa cgtgtcgtcg agtctgtttg gcaacgtgtc caccgcgctg 661 cggccggagg cgcggctctc cgccgaaacg cgtctgctgg gctggaatgt gccgccggag 721 gagctgcggc acattcccga gcactggcta acttacccgg agccgcccga atcgatgaac 781 tacctgctgg gcacgctcta catcttcttc accctgatgt cgatgctggg caatggactg 841 gtgatttggg tcttctccgc agccaaatcg ctgcgaactc cctccaatat actggtcatc 901 aatctggcct tctgcgactt catgatgatg gtcaagactc cgatattcat ctacaatagc 961 ttccaccagg gatatgcgct gggtcatctg ggatgccaga tctttggaat cattggctcc 1021 tatacgggaa tcgctgccgg tgccaccaat gcgtttatag cctacgatcg attcaatgtg 1081 atcactcgac ccatggaggg caagatgacg catggcaagg ccattgccat gatcatattc 1141 atctacatgt acgccactcc atgggtggtt gcctgctaca cggagacttg gggccgtttt 1201 gtgccggagg gatatctgac atcctgcacc tttgactatc tcaccgataa cttcgatacg 1261 cgactctttg tggcctgcat cttcttcttc agcttcgtgt gtcccaccac gatgatcacg 1321 tactactact cccagattgt gggccatgtc tttagccacg agaaagcact gcgggatcag 1381 gccaagaaga tgaacgtgga atcgctgcgt tcgaatgtgg acaaaaacaa ggagacggcg 1441 gaaatccgga tagccaaagc ggccatcacc atatgcttcc tgttcttttg ctcgtggacg 1501 ccgtacggag ttatgtcgct gattggcgcc tttggggata agaccctttt gacgcccgga 1561 gccacaatga ttcccgcctg tgcctgcaaa atggtggcct gcatcgatcc gttcgtgtac 1621 gccataagtc atcccagata ccgcatggag ctgcagaagc gatgtccctg gctggcgctc 1681 aacgaaaagg cgccggaatc gtcggctgtc gcctccacca gcaccaccca ggaaccacag 1741 cagaccaccg ccgcctaatg caaattccca cccaacagcc acccatccaa aaaatgctga 1801 caatgatgat gaactgaaac ggcaacgaac tcgtaatacc aaacgccagg gaaaattgta 1861 taaatatttc acggagtttc tgctagagtg caaagagttg aaaatatttt cttgttatga 1921 tttgtagtca cttttgtgtt tatgaaagaa atatagtaaa attacagcaa gctatggaaa 1981 aaagcgttat ataaactgtt tttttttttt aatttcgtcg aactaaccaa ataatgatgg 2041 aagttaaaga ggatttaatt ttacacaact tttttgtgtt aaatatggcc aatgtaagta 2101 actgaacata aaaagttaag taaatactct tatcaactga ataagtcatt aactcagttg 2161 acaactttaa taaaataaat tcttaaaaat cttgagttga tataatcagg tcatactcaa 2221 cgcattgtgc aaaacaccta ttgtttcacc aggtttactt atgtttatag aaatcctaaa 2281 tgtttggtgt tttgctgata acgaaaatgt gcattcattc gaaggggaaa aacttcttga 2341 tgtaaaaatg taggctcagt cccgctttga actttgcccc cttgtcaatt gtcaatcgtc 2401 cacttgacgc ggccattgca gggcactcag acgagccgaa gaaggcggct taatgctccc 2461 aggagcggag atggccaaca gcaaaagagt tggccaagaa // LOCUS DMRPA1G 1035 bp DNA INV 12-SEP-1995 DEFINITION D.melanogaster rpA1 gene. ACCESSION X05016 NID g8479 KEYWORDS ribosomal protein; rpA1 gene; unidentified reading frame. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1035) AUTHORS Qian,S., Zhang,J.Y., Kay,M.A. and Jacobs-Lorena,M. TITLE Structural analysis of the Drosophila rpA1 gene, a member of the eucaryotic 'A' type ribosomal protein family JOURNAL Nucleic Acids Res. 15 (3), 987-1003 (1987) MEDLINE 87146465 COMMENT related sequence: X05466. FEATURES Location/Qualifiers source 1..1035 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" gene 1..1035 /note="Ribosomal protein A1" /gene="RpA1" /allele="" /db_xref="FlyBase:FBgn0003274" TATA_signal 193..201 /gene="RpA1" /db_xref="FlyBase:FBgn0003274" precursor_RNA 253..851 /gene="RpA1" /note="primary transcript" /db_xref="FlyBase:FBgn0003274" CDS 342..683 /gene="RpA1" /codon_start=1 /db_xref="FlyBase:FBgn0003274" /product="r-protein" /db_xref="PID:g8480" /db_xref="FLYBASE:FBgn0003274" /db_xref="SWISS-PROT:P05389" /translation="MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIK ELAGKSIDDLIKEGREKLSSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESES EDDDMGFALFE" misc_feature 543..599 /gene="RpA1" /note="hydrophobic domain" /db_xref="FlyBase:FBgn0003274" misc_feature 600..659 /gene="RpA1" /note="hydrophilic domain" /db_xref="FlyBase:FBgn0003274" polyA_signal 816..821 /gene="RpA1" /db_xref="FlyBase:FBgn0003274" polyA_site 851 /gene="RpA1" /db_xref="FlyBase:FBgn0003274" BASE COUNT 270 a 227 c 255 g 283 t ORIGIN 1 catgctgtaa gaacggtcat attatcaagc tcatataaat actttttgct gttgtaaata 61 tataaaaaaa aaacaccaaa ttgttcaaaa atcaataata ttgctctaat ttttatttaa 121 aagcaaaatg gaaaataata tttgaattta tcgtttcatt agggtattgc tagataagaa 181 gtgtatattt tgtatatata agtatgagct gtattttcga gcctcgaccg cgcggccaca 241 ctgacttccg cctctttttc gacgacaact tgcaaaggaa agttgtgttt ttcgtacatt 301 ttgccaattc acgtttcgtg tcaagaaccc aagacttaaa catgcgttac gtggctgctt 361 accttctggc cgtcctcggt ggcaaggact cgcccgccaa cagcgatctg gagaagatcc 421 tcagctctgt gggcgttgag gtcgacgccg agcgtctgac caaggtcatc aaggagctgg 481 ctggcaagag catcgacgac ctgatcaagg agggtcgcga gaagctctcc tcgatgccgg 541 tgggcggcgg tggtgccgtc gcagccgctg atgccgcacc cgctgccgcc gccggtggcg 601 acaagaagga ggccaagaag gaggagaaga aggaggagtc cgagtccgag gatgacgaca 661 tgggcttcgc tctcttcgaa taagcggttg aatgtggcga atatactgtg caacacactt 721 gcgaggcgag aaagcagcgt tctggagcag ccattcatac atggccggcc agtctacaca 781 cttgtgtagc acccatccgt tcaccatttc tacgtaataa aaatcagcag tgtttgcact 841 ttatataaac caagtgaaat tgtgtttttt gtgccgttta cgcggttatt ttcatggttt 901 ttgtaccgtt ttttcaccca taacagtgga cccacgtgtt ggctaacatt ctgttggacg 961 cccgcggaat ggattatgtt aacttaacag tcggcggggt gcactgttaa gacagcgaat 1021 tcttattgga ttttt // LOCUS DMRPS31 780 bp DNA INV 25-MAR-1993 DEFINITION Drosophila melanogaster gene for putative ribosomal protein S31. ACCESSION X14247 NID g8493 KEYWORDS ribosomal protein; ribosomal protein S31. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 780) AUTHORS Itoh,N. TITLE Direct Submission JOURNAL Submitted (25-JAN-1989) Itoh N., Division of Biological Engineering, Kyoto Sangyo University, Kamigamo, Kita, Kyoto 603, Japan REFERENCE 2 (bases 1 to 780) AUTHORS Itoh,N., Ohta,K., Ohta,M., Kawasaki,T. and Yamashina,I. TITLE The nucleotide sequence of a gene for a putative ribosomal protein S31 of Drosophila JOURNAL Nucleic Acids Res. 17 (5), 2121 (1989) MEDLINE 89183616 COMMENT The sequence overlaps with that reported by Itoh et. al. in Nucl. Acids Res. 17:441-441(1989) x13265. Data kindly reviewed (23-Mar-1989) by Itoh N. FEATURES Location/Qualifiers source 1..780 /organism="Drosophila melanogaster" /strain="CantonS" /db_xref="taxon:7227" gene 1..780 /note="Ribosomal protein S26" /gene="RpS26" /allele="" /db_xref="FlyBase:FBgn0004413" TATA_signal 15..20 /gene="RpS26" /db_xref="FlyBase:FBgn0004413" exon 61..135 /gene="RpS26" /db_xref="FlyBase:FBgn0004413" /number=1 intron 136..218 /gene="RpS26" /db_xref="FlyBase:FBgn0004413" /number=1 exon 219..737 /gene="RpS26" /db_xref="FlyBase:FBgn0004413" /number=2 CDS 227..571 /gene="RpS26" /codon_start=1 /db_xref="FlyBase:FBgn0004413" /product="ribosomal protein S31" /db_xref="PID:g8494" /db_xref="FLYBASE:FBgn0004413" /db_xref="SWISS-PROT:P13008" /translation="MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNI VEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLRSF PKDMARNNQNRK" BASE COUNT 188 a 235 c 198 g 159 t ORIGIN 1 tcgctccggc taggtatttt ttagtccgtt tatccgagtt tcgccgggtg cgtccacact 61 attttctttc ttttcgtttc ccgaaacgtg aacacacgcg gatttcgctg ggcggatttt 121 gaaatgataa ataaggtaat tatggcagcc atccgctgag caaaggcagt gctaaatgct 181 aatggccgtg caaactgttt ccccccactg acaagcagcc gccaagatga ccaagaagcg 241 ccgtaacgga ggacgcaaca agcacaatcg cggccatgtg aagcccgtgc gctgcaccaa 301 ctgcgcccgc tgcgtgccca aggacaaggc aatcaagaag ttcgtcatcc gcaacatcgt 361 ggaggctgcc gccgtgcgcg acatcacgga ggccagcatc tgggactcgt acgtgctgcc 421 caagctctat gcgaagctcc actactgcgt gtcctgcgca atccactcca aggtggtgcg 481 caaccgttcg cgcgaggccc gccgcatccg cacgccgcca ctgcgttcct tccccaagga 541 catggcccgc aacaaccaga acaggaagta gaggtctcgt ccagccggag gagaggagca 601 ctgggtgcac cacctgacat ctccatatgg agtctaccaa tctagccgga ctcgcgcccc 661 agtgcgttcc acgctggcgt cgaggaatcg ccaagataag cagacgaaat atatgcatcc 721 agttcttttt taatttcaaa taaacagcgt gcttcattgg gaaacagcta ctacctacaa // LOCUS DMRUDG 7168 bp DNA INV 12-SEP-1993 DEFINITION Drosophila melanogaster rudimentary gene. ACCESSION X04813 NID g8508 KEYWORDS ATCase; CAD protein; CPSase; DHOase; GATase; multifunctional enzyme; rudimentary gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 7168) AUTHORS Freund,J.N. TITLE Direct Submission JOURNAL Submitted (12-MAY-1987) Freund J.N., L.G.M.E. 11 rue Humann, 67085 Strasbourg Cedex, France REFERENCE 2 (bases 1 to 7168) AUTHORS Freund,J.N. and Jarry,B.P. TITLE The rudimentary gene of Drosophila melanogaster encodes four enzymic functions JOURNAL J. Mol. Biol. 193 (1), 1-13 (1987) MEDLINE 87226179 COMMENT *map: X chromosome, band 15A 1-2; The CAD protein is a 'fusion' protein encoding four enzymatic activities of the pyrimidine pathway (GATase, CPSase, ATCase, DHOase). The sequence is derived from a mixture of genomic and cDNA clones. FEATURES Location/Qualifiers source 1..7168 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..7168 /note="rudimentary" /gene="r" /allele="" /db_xref="FlyBase:FBgn0003189" misc_feature 12..1154 /gene="r" /note="GATase domain (AA 1 - 381)" /db_xref="FlyBase:FBgn0003189" CDS 12..6722 /gene="r" /note="CAD protein (AA 1 - 2236)" /codon_start=1 /db_xref="FlyBase:FBgn0003189" /db_xref="PID:g8509" /db_xref="FLYBASE:FBgn0003189" /db_xref="SWISS-PROT:P05990" /translation="MASTDCYLALEDGTVLPGYSFGYVPSENESKVGVGGEVVFQTGM VGYTEALTDRSYSAQILVLTYPLIGNYGVPAPDEDEHGLPLHFEWTEGRRPGQPPWWW ARLAKRQLFNWRKWKTLPELAEATTRCPEFEFSIDTRALTKKLREQGSMLGKIVYEKP PVEGAMPKSSFVDPNVQDLAKECSVKERQVYGNPNGKGPRIAILDCGLKLNQLRCLLQ RGASVTFVPWSARLEDEQFDALFLSNGPGNPESCDQIVQQVRKVIEEGQKPVFGICLG HQLLAKAIGCSTYKMKIGNRGHNLPCLHRATGRCLMTSQNHGYAVDLEQLPDGWSELF VNANDGDQRGHCPCQQALLFGSVPSGASCWTAGHGVPVRCLYGEHSTEGFDHSAADRA ATASDYACHRFGSSDAAQSPNPGIRGLSIGQAGEFDYSGSQAINGMRESNIQTVLINP NIATVQTSKGMADKCYFLPLTPHYVEQVIKSERPNGVLLTLAARPSQLWRATGASRSF LQIQCPHFGHTHPVDHRDGGSQALCRAGNEIGEQVAPSEAVYSVAQALDAASRLGYPV MARAAFSLGGLGSGFANNEEELQTPGPTALAHSSQLIVDKSLKGWKEVEYEVVRAMPT TTRITVCNMENFDPLGIHTGESIVVAPSQTLSDREIKVLRSTAWKVIRHFGVVGECNI RYASVPRLQYYIIEVNERLSRTSALASKAPGYPLAYVAAKVGLGLPLPDIKNSVTGMR RPAFEPSLDYCVVKMPRWDLAKFVRVSKHIGSSMKSVGEVMAIGRQLRGSVPKSPAHG GQRMCLALNPDVVPLNKEQLAEQLSEPTDRRPFVIAAALQLGMSLRELHQLTNIDYWF LEKSERIILLQSLLTRNGSRTDAALLLKAKRFGFSDKQIAKYIKSTELAVRHQRQEFG IRPHVKQIDTVAGEWPPDQLSVTTHITEASRRSPVPRRTHYCGGLGVYRIGSSVEFIG SVGCLRELRKLQRPTIMINYNPETVSTDYDMCDRLYFEEISFEEWSWTSTRWRIARAS FCPMGGQLPNNIAMDLHRQQEVLGTSPESIDCAENRFKFSRMLDQEGYLAATLGKELT NLQSAIEFCEEVGYPCLVRPSYVLSGAAMNVAYSNQDLETYLNAASEVSREHPVVISK FLTEAKEIDVDAVASMDASCARLFPEHVENAGVHSGDATLVTPPQDLNAETLEAIKRI TCDLASVLDVTGPFNMQLIAKNNELKVIECNVRVSRSFPFVSKTLDHDFVATATRAIV GLDVEPLDVLHASARWASSAPVQFLAAPGAECTAGRRAWTSTGEVACFGDNRYEAYLK AMMSTGFQIPKNAVLLSIGSFKHKMELLPSYGIWPRWVTSYSFHGHCDFYANGVNVES VQWTFDKTTPDDINGELRHLAEFLANKQFDLVINLPMSGGVPRRVSSFMTHGYRTRRL AVEYSIPLVTDVKCTKLLVESMRMNGGKPPMKTHTDCMTSRRIVKLPGFIDVHVHLRS RSHAQGGLCQWNSSRSGWRLTLVCAMPNTNPSIVDRETFTQFQELAKAGARCDYALYV GASDDNWAQVNELASHACGLKMYLNDTFGTLKLSDMTSWQRHLSHWPKRSPIVCHAER QSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKGVKVNLRVCPHHLFLSTKDVD GLGHGMSEVRPLLCSPEDQEALWENIDYIDVFATDHAPHTLAEKRSERPPPGFPGVET ILPLLLQAVHEGRLTMEDIKRKFHRNPKIIFNLPDQAQTYVEVDLDEEWTITGNEMKS KSGWTPFEGTKVKGLVYRSVLRGELAFRRWPILLERLRGINGGAPNKDVHWRRRHHRI CCPATTMPMTPLPASSPPKDPGGWPYTEYRPKVPLWDGANFRAPSSPSPRIRLDSASN TTLREYLQRTTNSNPVAHSLMGKHILAVDMFNKDHLNDIFNLAQLLKLRGTKDRPVAL LPGKIMASVFYEVSTRTPCSFAAAMLRLGGRVISMDNITSSVKKGETWRTASRLCPAM PTSWLLRHPSPGAVARTTFSQSRLSMPACRREHSHQALLDIFTDPRVGGTVNGLTITM WRLEERTDRALAGPPADPVQCEPAVMWRRDSLQMPDEVVQFVHQRGVKQLFARDLKEC AARHGCALHDSHSRERFDNVEDYEKCCGHLVLTPEHMMRAKKRSIVLHPLPRLNEISR EIDLDPRAAYFRQAEYGMYIRMALLAMVVGGRNRRSRGFTMENHNL" misc_feature 1272..4430 /gene="r" /note="CPSase domain (AA 421 - 1473)" /db_xref="FlyBase:FBgn0003189" misc_feature 4281..4283 /gene="r" /note="put. phosporylation site (AA 1424)" /db_xref="FlyBase:FBgn0003189" misc_feature 4476..5417 /gene="r" /note="DHOase domain (AA 1488 - 1802)" /db_xref="FlyBase:FBgn0003189" misc_feature 5763..6719 /gene="r" /note="ATCase domain (AA 1918 - 2236)" /db_xref="FlyBase:FBgn0003189" BASE COUNT 1619 a 1923 c 2045 g 1581 t ORIGIN 1 actcgtccaa tatggcctct acggactgtt acctcgcact ggaggatggc acagtgttgc 61 ccgggtactc ctttggctac gttccctcgg agaatgaatc caaagtgggt gttggtggcg 121 aggtggtctt ccaaacgggc atggttggct acacggaggc gctcacggat cgatcgtaca 181 gtgctcagat cctggtgctt acctatccac tgatcggtaa ctatggggta ccagcgccgg 241 atgaggacga gcacggactg ccgctgcact tcgagtggac tgaaggacgt cgtccaggcc 301 agccgccttg gtggtgggcg aggctggcta agaggcagct cttcaactgg cgcaaatgga 361 agacgctgcc cgagttggct gaagcgacga caaggtgccc ggaattcgaa ttcagcattg 421 atactcgagc cctgaccaaa aaactgaggg agcagggaag catgctaggc aagattgtct 481 acgagaaacc gccggtcgaa ggggctatgc ccaagtccag tttcgtagat ccgaacgttc 541 aggatttggc caaggagtgc agcgttaagg agcgacaagt gtacggtaat cccaatggca 601 agggaccacg gatcgccatt ctggactgtg gactgaagct caaccagttg cgctgcctgc 661 tgcaacgtgg cgcctcggtg accttcgtcc cctggagcgc tcgtctcgag gatgagcagt 721 tcgacgccct ctttctgtct aacggacctg gtaatccgga gagctgcgac cagatcgtcc 781 aacaggtgag aaaagtgatt gaggagggtc aaaagccagt ctttggaata tgtctgggtc 841 accagctgct ggcgaaggca atcggctgct ctacttacaa aatgaagatc ggcaatcgag 901 gacacaatct gccctgcctg caccgagcaa ctggacgctg cctgatgacg tcgcagaatc 961 acggatacgc ggtcgatttg gagcagttgc ccgacggctg gtcggagcta tttgtgaatg 1021 ccaacgacgg cgaccaacga gggcattgtc catgccagca agccctactt ttcggttcag 1081 ttccatccgg agcatcatgc tggaccgcag gacacggagt tcctgttcga tgtctttatg 1141 gagagcattc aacagaagga tttgaccatt ccgcagctga tcgagcagcg actgcgtccg 1201 actacgcttg ccatagattc ggctccagtg atgccgcgca aagtcctaat cctgggatcc 1261 gtggactgtc cattggtcag gctggcgagt ttgactactc cggatcgcag gccatcaacg 1321 gcatgaggga atcaaacatt caaacagtgc tcatcaatcc gaacatagcc accgttcaga 1381 cctctaaggg aatggccgac aagtgctact tccttcccct aacacctcac tatgttgagc 1441 aggtgattaa gtcggagcgt ccgaacggag tactgctcac tttggcggcc agaccgtctc 1501 aattgtggcg tgcaactgga gcgagccgga gttttctcca aatacaatgt ccgcattttg 1561 ggcacaccca tccagtcgat catcgagacg gaggatcgca agctctttgc cgagcgggta 1621 acgagattgg cgagcaggtg gcgccatctg aggctgtgta ctccgttgcc caggcactgg 1681 atgcggccag tcgcttgggt tatccggtga tggcccgtgc tgccttctcc ctgggcggac 1741 tgggttccgg gttcgccaac aacgaggagg agctgcagac gcctggccca acagcactgg 1801 cccactcgag ccaactaatt gtggacaaat ccctgaaggg ttggaaggag gtggagtacg 1861 aggtggtgcg cgcgatgcct acaacaactc gcattaccgt atgcaacatg gagaacttcg 1921 atcccctggg catccacacg ggcgagagta ttgtggtggc cccatcgcag accctctcgg 1981 atcgcgagat caaagtcctc cgcagcacgg cctggaaggt tatccgtcat ttcggtgtcg 2041 ttggcgagtg caacattcga tacgcttctg tccctcgatt gcagtactac attatcgagg 2101 tgaacgaaag actgtcgcgc acgtccgcgt tggccagcaa ggcacccggc tatccactgg 2161 cctatgtggc cgccaaagtt ggtttgggat tgcccctgcc agatatcaag aactcggtga 2221 cgggcatgag gaggcctgct ttcgagccat ccctcgatta ctgtgtggtc aagatgccac 2281 gctgggattt ggccaaattc gtgcgggtta gcaagcacat tggcagctcg atgaaaagtg 2341 tcggtgaggt gatggccatc ggtcggcaac ttcgaggaag cgttccaaaa agccctgcgc 2401 atggtggaca gcgaatgtgc ttggctttga atccggatgt ggttccgctt aacaaggagc 2461 agctggccga gcagctttcg gagccgacgg atcgtcgtcc cttcgtcatt gccgctgctt 2521 tgcaattggg catgagcctt agggagctgc atcaactaac caatatcgat tattggtttc 2581 tggaaaagtc ggaaaggatc atcttactgc agtccctgct cacccgtaat ggcagtcgaa 2641 ccgatgccgc tctgctgtta aaggccaagc gttttggttt ttcggacaag cagatagcta 2701 agtacattaa gagcacggag ctggctgttc gtcaccagcg gcaggagttt ggcatccgcc 2761 cgcatgtgaa gcagatcgac acggtggccg gcgaatggcc gccagaccaa ctatctgtaa 2821 ccacacatat aacggaagcg agcagacgat ctccagttcc ccggcggaca cactattgtg 2881 gtgggctcgg cgtctatcgt atcggatcct cagtggagtt tattggttcc gtgggctgcc 2941 tgcgcgaatt gaggaagcta cagcgaccca ccattatgat taactacaat cctgaaacgg 3001 tgtccaccga ctacgatatg tgcgatcgct tgtatttcga ggagattagc ttcgaggagt 3061 ggtcatggac atctacgaga tggagaatag cgagggcatc attctgtcca atgggcggcc 3121 agctgcccaa caatatagcc atggatctgc atcgccagca ggaggtgttg ggcacatcgc 3181 cggagtccat cgactgtgcc gaaaatcgat ttaaattctc gcgcatgctg gaccaggaag 3241 ggtatcttgc agccacgctg ggaaaggagc taaccaacct acagtcggcc atcgaatttt 3301 gcgaggaggt tggctatccc tgtctggtta ggccatccta tgtgctctcc ggtgcggcca 3361 tgaatgtggc ctattccaat caggatctgg agacatatct gaacgccgcc tccgaggtga 3421 gccgcgagca tccggttgtc atttcgaagt tcctcaccga ggccaaggag atcgatgtgg 3481 atgcagtggc atcgatggac gcatcctgtg ctaggctgtt tccggagcac gtggagaatg 3541 ccggagtgca ttcaggtgat gccacgctgg tcaccccacc gcaggatctg aatgcggaga 3601 ccctggaggc cattaaacgg atcacatgcg atctggccag cgtactggat gtcaccggtc 3661 ccttcaacat gcagctaatt gccaagaaca acgagctgaa ggtcatcgaa tgcaatgtcc 3721 gtgtgtcgcg atccttcccc ttcgtctcca agacgctgga ccacgacttt gtggccacgg 3781 cgacgcgtgc gattgtggga ctcgatgtcg agccactgga tgtgctccat gcgtcggcaa 3841 ggtgggcgtc aagtgcccca gttcagtttc tcgcggctcc gggcgcggag tgtacagctg 3901 ggcgtcgagc atggacctcc accggtgagg ttgcctgctt cggggacaac cgctatgagg 3961 catatctcaa ggccatgatg tccacgggct tccagatacc caagaacgcc gtacttctct 4021 ccattggcag tttcaagcac aagatggagc tgctgccttc atacgggatc tggccaagat 4081 gggttacaag ctatagcttc catgggcact gcgactttta tgccaacgga gttaatgtgg 4141 aatccgtgca gtggacattc gacaagacga ctcccgatga catcaacggt gagctgagac 4201 acctggccga gttcctggcc aacaagcagt tcgacctggt catcaacctc ccgatgagcg 4261 gcggggtgcc aaggagggtc tcctcgttca tgacccatgg ctaccgcacc cgtcgcctgg 4321 ccgtggagta ctctattccg ctggtgaccg atgtgaagtg caccaagctg ctggtagaat 4381 caatgcgaat gaacggtggc aagccgccaa tgaagacgca cacggattgt atgacctcgc 4441 gtagaattgt gaagctgccg ggcttcatcg atgtgcatgt gcatttgcgg agccggagcc 4501 acgcacaagg aggactttgc cagtggaaca gcagccgctc tggctggcgg ctgaccctcg 4561 tgtgcgccat gcccaataca aatccctcga tcgtggacag agagacgttc acccagttcc 4621 aggagctggc caaagcggga gctcgatgcg actatgccct gtatgtgggg gcctcggatg 4681 acaattgggc gcaggtcaac gagctggcca gtcatgcgtg tggccttaag atgtacttaa 4741 acgacacttt cggcacccta aaactgagcg acatgaccag ctggcagagg catctcagcc 4801 actggcccaa gcggtctccc atcgtttgtc atgcggagag gcagagcaca gcggctgtga 4861 ttatgctggc ccatcttctc gaccgttcgg ttcacatctg ccatgtggcg cgaaaggagg 4921 agatccaatt gattcgttcc gccaaggaaa agggcgtcaa ggtgaacctg cgagtgtgcc 4981 cccatcactt gttcctcagc accaaggatg tggacggttt gggtcacgga atgtccgagg 5041 taaggccatt gctctgctca ccggaggatc aagaggctct gtgggagaat attgattaca 5101 tcgatgtatt tgccaccgat cacgcgccac acacactggc cgagaaacgt tcggagcgtc 5161 caccgcctgg atttccgggc gtggagacca ttctgccgct cctcctgcag gctgttcacg 5221 agggtcgttt gacgatggag gacatcaaga ggaagttcca tcgcaatcca aaaatcatct 5281 tcaacctgcc tgatcaggcg cagacctacg tggaggtgga tctcgacgag gagtggacca 5341 taacgggcaa tgagatgaag agcaagtccg gttggacacc atttgagggc accaaggtca 5401 agggactcgt ctaccggtcg gttcttcgcg gcgagctggc cttccgtcga tggccaatat 5461 tgctggagcg gcttcggggc ataaatggtg gcgccccaaa caaggacgtc cattggcgtc 5521 ggaggcatca caggatctgc tgcccagcga caacgatgcc aatgacacct ttacccgcct 5581 cctcacctcc gaaggacccg ggtggatggc cgtacacgga atatcgacct aaggtccccc 5641 tctgggacgg agccaacttc cgcgccccaa gctcgccatc cccacgcatc cgtctggatt 5701 ccgccagcaa caccacgctg cgggaatact tgcagcgcac taccaactca aatccggtgg 5761 cccactcgct aatgggcaag cacatccttg ccgttgacat gttcaacaaa gatcacctca 5821 acgacatctt taacctggca cagctgctca agctgcgggg tacgaaggat cgtccggtgg 5881 cgctgctgcc aggcaagatc atggccagtg tgttttacga ggtcagcacg cggacgccgt 5941 gcagctttgc agctgccatg ctgcgtttgg gagggcgagt gatcagcatg gacaacatca 6001 cgtcgtcggt gaagaagggc gagacgtgga ggacagcatc aaggttgtgt ccagctatgc 6061 cgacgtcgtg gttgctccgt catccatcgc ccggagctgt agcgcgcacg accttctccc 6121 aaagccgctt atcaatgccg gcatgtcgtc gtgagcattc ccaccaggcg ctgctggaca 6181 tcttcaccga tccgcgagta ggtggcactg tgaacgggct gaccatcacc atgtggcgac 6241 ttgaagaacg gacggaccgt gcactcgctg gcccgcctgc tgaccctgta caatgtgaac 6301 ctgcagtgat gtggcgccga gatagcctgc agatgcccga tgaggtcgtc cagttcgtcc 6361 atcagcgcgg cgtcaagcag ttatttgcac gcgacctaaa ggaatgtgct gcccgacacg 6421 gatgtgctct acatgactcg cattcacgcg agcgttttga taacgtggaa gattacgaga 6481 agtgctgtgg ccatctggtg ttgacgcccg agcatatgat gcgggccaag aagcgttcga 6541 ttgttctgca tccgctgccg cgtctgaacg agatcagccg ggagatcgac ttggacccaa 6601 gggccgccta cttccggcag gcggagtacg gcatgtacat ccgtatggcc ttgctggcca 6661 tggtcgttgg tggacgcaat aggcgctcta gaggatttac catggaaaac cacaatcttt 6721 gactctctac tatttttttt gtatactatc ttttttatac cacacatgta cgcagctgca 6781 tacgaatata ttgatccatt tgggttgatg tttgtgtctt tatggatgaa catataatac 6841 ttgtatctgc atccaaaaca tgcaaaaatc atatctttct ctggaaaatg tgaaacagtt 6901 ttacggtttt ccctttaatt ctaacaaata tatattttca catatttcat agtatagcag 6961 tataatattt taacaagcaa aaaaaaaata aggtgtcata tgttatatag attaattata 7021 agatggtgat ggaaatcctt attctaagtg tcagtctcaa acgtttacaa taaacatcac 7081 gtgcccatgt gccgctggtt gacggtggtg cttggtgctc tcctgcttca tagtaccgct 7141 acaccaccat cggctgtggg tcgccact // LOCUS DMSLP1D 1679 bp DNA INV 22-NOV-1993 DEFINITION D.melanogaster sloppy paired 1 gene for slp1 protein. ACCESSION X66095 S37037 NID g8616 KEYWORDS slp1 protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1679) AUTHORS Grossniklaus,U. TITLE Direct Submission JOURNAL Submitted (20-MAY-1992) U. Grossniklaus, Universitaet Basel-Biozentrum, Dept of Cell Biology, Klingelbergstrasse 70, CH 4056 Basel, SWITZERLAND REFERENCE 2 (bases 1 to 1679) AUTHORS Grossniklaus,U., Pearson,R.K. and Gehring,W.J. TITLE The Drosophila sloppy paired locus encodes two proteins involved in segmentation that show homology to mammalian transcription factors JOURNAL Genes Dev. 6 (6), 1030-1051 (1992) MEDLINE 92275347 FEATURES Location/Qualifiers source 1..1679 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /clone_lib="charon-4A" /chromosome="2" /map="24D (cytological map)" TATA_signal 128..135 gene 268..1236 /note="sloppy paired 1" /gene="slp1" /allele="" /db_xref="FlyBase:FBgn0003430" CDS 268..1236 /gene="slp1" /codon_start=1 /product="sp1 protein" /db_xref="PID:g8617" /db_xref="FLYBASE:FBgn0003430" /db_xref="SWISS-PROT:P32030" /translation="MVKSEMEFKSNFSIDAILAKKPINTATQPIKTEPVHHHHQYVHP YSNSDGELSASEDFDSPSRTSTPMSSAAESLSSQNNDKLDVEFDDELEDQLDEDQESE DGNPSKKQKMTAGSDTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKAN KRGWQNSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRKNPG ASRTRLAAYRQAIFSPMMAASPYGAPAPSYGYPAVPFAAAAAAALYQRMNPAAYQAAY QQMQYQQAPQAHHHQAPHPAQMQGYPPQLNAELFQRMQFFGKFPSS" misc_feature 292..330 /gene="slp1" /note="conserved region II" /db_xref="FlyBase:FBgn0003430" misc_feature 595..924 /gene="slp1" /note="fork head domain" /db_xref="FlyBase:FBgn0003430" misc_feature 1051..1098 /gene="slp1" /note="conserved region III" /db_xref="FlyBase:FBgn0003430" polyA_signal 1607..1612 BASE COUNT 465 a 477 c 386 g 351 t ORIGIN 1 gagggtttaa ctgcccaact acctgctgcc catccctttc gcactccctg tgcgcattag 61 ctacccgtct ctttcggcct gtgggctctc ttcgtgtaga cttcgttcga gcgaccgggg 121 gttggactat aaatagcccg atccggggct gtagagaatc agtttagagc tagcatctca 181 agagcaaaca tctcaagcga tcccaagtcg tgtgtgagaa tcagaaacca aagaaaacaa 241 aaatctaaag atatccgaat cagaaaaatg gtgaaaagtg aaatggaatt caagagcaac 301 ttctccatcg atgccatttt ggccaagaaa cccatcaaca ccgcaactca acccatcaaa 361 accgaaccgg tgcatcatca tcatcagtac gttcatccgt actccaattc cgatggcgaa 421 ctctcggctt cggaggattt cgacagcccc agcaggacca gcacacccat gagcagtgcc 481 gccgagagtc tatcgtcgca aaacaatgac aagctcgacg tggagttcga cgatgagctg 541 gaggatcagc tggacgagga ccaggagagc gaggatggca atcccagcaa gaaacagaaa 601 atgaccgccg gcagcgatac caagaaaccg ccctacagct acaacgccct catcatgatg 661 gccatccagg atagtcccga gcagcggttg actttgaatg gcatctatca gtatctgatc 721 aatagattcc cctacttcaa ggccaacaag cggggctggc agaactccat tcgccacaat 781 ctgagtctga acaagtgctt cacgaagatt ccccgcagct acgatgatcc cggcaagggc 841 aactactgga tcctggaccc ctcggccgag gaggtattca ttggcgagac caccggcaag 901 ctgaggcgca agaatcccgg cgccagtcgc actcgcctgg ccgcctatcg tcaggccata 961 ttctcgccga tgatggctgc ttcaccctac ggagctccag ctcccagcta tggatacccg 1021 gctgttccat ttgccgccgc tgccgccgcc gccctgtacc agcgcatgaa tcccgccgcc 1081 tatcaggctg cctatcagca gatgcagtac cagcaggctc cccaggccca ccatcatcag 1141 gcgccccatc ccgcccagat gcagggctat ccaccacaat tgaacgccga gttgttccag 1201 cgcatgcagt tctttggcaa gttcccatcc agctaaatct tggcagtcgg cgcagaacca 1261 agcccagcgc tttggatcga caaaaaaaac ccagggacaa aatgggtcgc ttggggaaga 1321 gctaggactg gtaggacttc ctgctcgctt gccccgtgga aaaacccgtg acgtctaaat 1381 gctgcattta gcaaattcct ttggtcatca tcgcattgac cgcttcgctt cttcagcggc 1441 tccttcgaat cgacttggaa agtcgatggt taacggcaat gaatgcgcag ccaaatcttc 1501 aggactgctg aagaaggatt cctgccagcc gagagccctt gtagtttgct caccaacttt 1561 tgtacatatg taattaggaa atataaaaaa aaaagaaaaa aaaaataata aacaaattta 1621 aaaagaaaaa tttcaaacgg ctttcttatt tttaaaatta tttcagaata ctacaattt // LOCUS DMSLP2D 1979 bp DNA INV 22-NOV-1993 DEFINITION D.melanogaster sloppy paired 2 gene for slp2 protein. ACCESSION X66098 S37043 NID g8620 KEYWORDS slp2 protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1979) AUTHORS Grossniklaus,U. TITLE Direct Submission JOURNAL Submitted (20-MAY-1992) U. Grossniklaus, Universitaet Basel-Biozentrum, Dept of Cell Biology, Klingelbergstrasse 70, CH 4056 Basel, SWITZERLAND REFERENCE 2 (bases 1 to 1979) AUTHORS Grossniklaus,U., Pearson,R.K. and Gehring,W.J. TITLE The Drosophila sloppy paired locus encodes two proteins involved in segmentation that show homology to mammalian transcription factors JOURNAL Genes Dev. 6 (6), 1030-1051 (1992) MEDLINE 92275347 FEATURES Location/Qualifiers source 1..1979 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /clone_lib="charon 4A" /chromosome="2" /map="24D (cytological map)" gene 332..1669 /note="sloppy paired 2" /gene="slp2" /allele="" /db_xref="FlyBase:FBgn0004567" CDS 332..1669 /gene="slp2" /codon_start=1 /product="slp2 protein" /db_xref="PID:g8621" /db_xref="FLYBASE:FBgn0004567" /db_xref="SWISS-PROT:P32031" /translation="MVKIEEGLPSSEISAHSLHFQHHHHPLPPTTHHSALQSPHPVGL NLTNLMKMARTPHLKSSFSINSILPETVEHHDEDEEEDVEKKSPAKFPPNHNNNNLNT TNWGSPEDHEAESDPESDLDVTSMSPAPVANPNESDPDEVDEEFVEEDIECDGETTDG DAENKSNDGKPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYR DNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRT TAASRSRLAAFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPSLLASMYQRYNPFAPKGG PGHPGLPPGLRDYPDHRDLKDRQDHHHRPSSHHPRAVSSTSDCSTNSCCINMQQPPLW RLIKGNSRWRQHRRRHNHRPLITTHTWRWVRRPFRLAAIPRDPRHSLFTNPSP" misc_feature 500..544 /gene="slp2" /note="conserved region II" /db_xref="FlyBase:FBgn0004567" misc_feature 839..1168 /gene="slp2" /note="fork head domain" /db_xref="FlyBase:FBgn0004567" misc_feature 1292..1339 /gene="slp2" /note="conserved region III" /db_xref="FlyBase:FBgn0004567" BASE COUNT 587 a 515 c 463 g 414 t ORIGIN 1 acggacgtga aatcgtgtat ttttgtgggc tgtgtattaa cgtcgagcgt cggtaaaact 61 gaacgtaaag cgagagaact gaacgaatga gccccaattt gaatagctag tgactttgaa 121 gcggccaaat aaatcaatta gaagttaatc aaatatagcc tttagcaaag cctttagaaa 181 aaaaatgaac ttaaggtttt ggctatcttg aattctggca aaaccataaa gaactttatg 241 aaagcacatc ggcaaatcaa actaaaacca aaactaataa agctaacttc caaggcaatg 301 tggagttttt aaaccatctg acctaagaat catggtgaag atcgaggaag gtctgccgtc 361 cagcgagatt agcgctcaca gtctccactt tcagcaccat caccacccac tgccgcccac 421 cactcaccat tccgcgctcc aaagtcccca tcccgtcggg ctaaatctca ccaatctaat 481 gaaaatggcc aggacgccac atctgaagtc cagcttttcc attaattcca ttctacccga 541 gactgtggag catcacgacg aggatgagga agaggatgtg gagaagaaat caccagcgaa 601 atttccgccc aaccataata ataacaatct gaataccacg aactggggat cgccagagga 661 tcatgaggcg gaaagcgatc ccgaatcgga tctcgatgtg acctccatgt caccggctcc 721 cgttgcgaat cccaatgaaa gcgatccgga tgaagtcgac gaggagttcg tggaggagga 781 tatcgaatgt gatggggaga caaccgatgg cgatgcggaa aataaatcaa acgatggcaa 841 gccggtgaag gataagaaag gcaacgaaaa gccaccttac agctacaatg ccctgatcat 901 gatggccatt cgtcagagtt ccgagaagcg tctaaccctg aatggcatct acgagtacat 961 aatgaccaat catccatact accgggacaa caaacagggc tggcagaact ccataagaca 1021 taacttgagc ctgaataagt gtttcgtcaa ggtgccaaga cactatgatg atcctggcaa 1081 gggcaactac tggatgttgg atccctcggc ggaagacgta ttcattggcg gatcgacggg 1141 gaagctgagg agaagaacca cagccgcctc tcgctcccga ctggccgcct tcaagagatc 1201 gctgatagga cccatgttcc cgggactggc tgcctatccg cagtttggac aatttcttac 1261 ctatcctccg acggcgccta gcttgctggc cagcatgtat cagcgttata atccctttgc 1321 cccgaaaggt ggaccaggac atccgggctt gccaccgggc ttgcgggatt acccggacca 1381 ccgggacctc aaggaccgcc aggaccacca ccaccgccct tcgtcgcacc acccacgagc 1441 agtgagctct accagcgatt gcagtaccaa cagctgttgc atcaacatgc agcagccgcc 1501 gctctggcgg ctcatcaaag gcaactctcg gtggcggcag catcggcggc gtcacaacca 1561 ccgcccactc atcaccaccc acacctggcg gtgggtcagg cgcccctttc gcctggcggc 1621 gattccccgg gaccctcgcc acagcctctt cacaaacccg tcaccgtagt ctcccgcaat 1681 agctgaagat tctggcgaga agaatcggaa gattctttgg cttgaggagc agcatatgta 1741 gctcataagt attcactgta catagatata gccgcgactg aggcgctaga cgcttgtaaa 1801 tagttgagaa ctgggttaaa tatatgaaaa ctaaagaaag aacttaaact aaaaccatat 1861 tcggttgacc ggatttaata aaagcctttg cagagtttgt gaaaatatcg gaactattaa 1921 aataagaaaa taccatccct actctttcgt ctaaatgaga atataattta taatggaac // LOCUS DMSPERM 2521 bp DNA INV 29-MAR-1993 DEFINITION Drosophila Mst87F gene for put. structural sperm protein. ACCESSION Y00831 NID g8650 KEYWORDS sperm protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2521) AUTHORS Schaefer,M. TITLE Direct Submission JOURNAL Submitted (10-FEB-1988) Schaefer M., Institut fuer Genetik, Universitaet Duesseldorf, Universitaetsstr. 1, 4000 Duesseldorf 1 REFERENCE 2 (bases 1 to 2521) AUTHORS Kuhn,R., Schafer,U. and Schafer,M. TITLE Cis-acting regions sufficient for spermatocyte-specific transcriptional and spermatid-specific translational control of the Drosophila melanogaster gene mst(3)gl-9 JOURNAL EMBO J. 7 (2), 447-454 (1988) MEDLINE 88211557 COMMENT strain=Canton S; library=Charon4; developmental stage=embryo. FEATURES Location/Qualifiers source 1..2521 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="87F" mRNA join(1653..1731,1823..2160) /gene="Mst87F" /db_xref="FlyBase:FBgn0002862" exon 1653..1731 /gene="Mst87F" /db_xref="FlyBase:FBgn0002862" /number=1 prim_transcript 1653..2160 /gene="Mst87F" gene 1653..2160 /note="Male-specific RNA 87F" /gene="Mst87F" /allele="" /db_xref="FlyBase:FBgn0002862" intron 1732..1822 /gene="Mst87F" /db_xref="FlyBase:FBgn0002862" /number=1 exon 1823..2160 /gene="Mst87F" /db_xref="FlyBase:FBgn0002862" /number=2 CDS 1841..2011 /gene="Mst87F" /codon_start=1 /product="structural sperm protein" /db_xref="PID:g8651" /db_xref="FLYBASE:FBgn0002862" /db_xref="SWISS-PROT:P08175" /translation="MCCGPCGPCCGPCCGPCCGPCGPCGGGCGPCYGPNVCGPCYACG PCGGCYCGYPCC" polyA_signal 2138..2143 /gene="Mst87F" /db_xref="FlyBase:FBgn0002862" BASE COUNT 771 a 529 c 465 g 756 t ORIGIN 1 gaattcgata tttccggccg gagaaagaca tttggttcac tgaacccaat aaaaatcctt 61 gaactcccgt cgccagagaa atacaaaata tttgtataca tatgtattgc caataatcta 121 tttcaaacaa aggccagcca caaatatgaa cgaaaaaact aagttagagc agcgtctgct 181 gcccttttgg cggcaccctc acaaaattat tgaccagagt tccatccatc tcgagtttga 241 aaaaaaaaaa aacagagagc cacagagaga aaaattcaat gaaagtcatt taaccacatt 301 taggtggtaa gaaaatcatt atttaaaatc tgctaccgct ttccgattcg attgagacgc 361 gcttcgtcac taagtccgct actagattta tgtaactaag tttgattcac tttatattag 421 aaactttgta atataagcta gatttgtatt taatatatct tactctactt cttcgttcac 481 atttctttga ggagcctttc gtcactacgc tatatatttt ttctatgata gtgatttttc 541 accgtgccga aacagaacga ctttgagttg gacttgtccg tctcctcgga tgcgagattc 601 tacccaaata tttctgctag aagggagagg acttctgtgc ggtttgacga cggggttttt 661 gcttcggttt ctgcctctgc tgatcgacac acacacaaat acatacatac attctaatca 721 acatgcggga aaacatataa ttcgaatttt tgatatttcg cccgaccatt ttgcggagaa 781 aattgcattt aaacgcctat tatgcgcttt ttatttgcaa cccatacttt tctgcccgaa 841 tgctccggct gactcagtca tgcacaaata taaatcattg tataatcatt gtgtataaca 901 ctagggttcc attttggagg caggcgagct ctgtcaactg gtccactagg cttcctgctt 961 ttcgggagtt aattaaatcc gatatcgtaa aatcgttagc aaatgaaata aattgcgctc 1021 aattacaccg agtgacatcc aaggcgcaat cgctggtgat tgacctcttt caatgcgacg 1081 acattcttgg ctcgattcgg ctggggaaaa aaaccaagaa aaaacaaaaa aaaaaaaaaa 1141 cataagcaac acaagtcttc ggtcagataa tgaacttaat atacacttgc atatatagta 1201 tacccgttca gccccgatac ccggattctc ggcaatcggc aatcggctat gcgccatgca 1261 cttaatcaaa aagtacgaca aaatcaagag taaacaaaag tgcagcgcag aactcgactt 1321 gagaaccggc agcgattcga acttcagccg ggtgcaatga acacatgatc cgacaaaaca 1381 aaaatttaaa tctcatttac ctcgtttata tgttacagtg cactggaaaa atagtggcaa 1441 cttgatgcgt tcctaccaag ttggatgata actacatagg taggatcgaa atataaaggt 1501 taattcacat gaagattgag catttcccta cttacaatac aatcattata agctttacca 1561 atgctttaaa caaaatattt tatatagtat cctttgcctc ttcagtccga cttgtcaaac 1621 cgatatacct gtgcgtaacc agattttgta tcattattat ttgtcctttc ggcctgaaca 1681 catcaaaatt tgtcgtctag tctcaaatta tttctttttg ttcggttcaa agtgagtgaa 1741 aataagtgaa aatttacaaa aatgaaaatg tgtaaaaaaa ttcctatggc atatcattta 1801 aacgtacctt ttctcccttc agaactttta cgaattaatc atgtgctgcg gaccctgtgg 1861 accctgctgc ggaccttgct gcggaccctg ctgtggtcca tgcggaccat gcggaggagg 1921 atgtggaccc tgctatggac cgaatgtctg cggaccatgc tatgcctgtg gaccctgtgg 1981 cggctgctat tgtggatacc cttgctgcta gacagttgca actggccatg tccaagaagg 2041 gttcaccaga acaccaagac gataggatag aacctatccc tatttcatcc tcgtattcat 2101 ctaatattcg tgaaccacaa atataggtat ttgagacaat aaaaatgagg tgtaagcttc 2161 aagacggttt ggtttttgat tagtgataat agtcaaatgc aatttgctta gccaaatatc 2221 tgattttaga acacagatac agatgtttag acgcaaatgc gacccgaatt agaatcgatc 2281 cgcagtcttc taatgcgatg tggtcgacct tgacgtttcg ccgagagttt attgtccttt 2341 caatagaaca cgctaaataa aacttattta agcaggtaca tacatattta acccgcacac 2401 actcatgcat gttcttgtgt ttttgttttt atttttattt ttattttact tttgtgtata 2461 tttactgcac taattctgcg acgaactagt ttcggcacag cggattccga ttcctgaatt 2521 c // LOCUS DMSUPFUSE 1863 bp DNA INV 29-MAY-1998 DEFINITION D.melanogaster suppressor of fused gene. ACCESSION X95652 NID g1199513 KEYWORDS PEST region; suppressor of fused. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1863) AUTHORS Pham,A., Therond,P., Alves,G., Tournier,F.B., Busson,D., Lamour-Isnard,C., Bouchon,B.L., Preat,T. and Tricoire,H. TITLE The Suppressor of fused gene encodes a novel PEST protein involved in Drosophila segment polarity establishment JOURNAL Genetics 140 (2), 587-598 (1995) MEDLINE 96120238 REFERENCE 2 (bases 1 to 1863) AUTHORS Tricoire,H. TITLE Direct Submission JOURNAL Submitted (13-FEB-1996) H. Tricoire, Institut de physique nucleaire, 91406 Orsay cedex, FRANCE FEATURES Location/Qualifiers source 1..1863 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="87c8" gene 296..1702 /note="Suppressor of fused" /gene="Su(fu)" /allele="" /db_xref="FlyBase:FBgn0005355" CDS 296..1702 /gene="Su(fu)" /note="encodes novel PEST protein" /codon_start=1 /db_xref="PID:e223181" /db_xref="PID:g1199514" /db_xref="FLYBASE:FBgn0005355" /db_xref="SPTREMBL:Q27279" /translation="MAEANLDKKPEVKPPPGLKAIIDHLGQVYPNQPNPLQVTTLLKY WLGGQDPLDYISMYKFPGDVDRNVPPHWHYISFGLSDLHGDERVHLREEGVTRSGMGF ELTFRLAKTEIELKQQIENPEKPQRAPTWPANLLQAIGRYCFQTGNGLCFGDNIPWRK SLDGSTTSKLQNLLVAQDPQLGCIDTPTGTVDFCQIVGVFDDELEQASRWNGRGVLNF LRQDMQTGGDWLVTNMDRQMSVFELFPETLLNLQDDLEKQGSDLAGVNADFSFRELKP TKEVKEEVDFQALSEKCANDENNRQLTDTQMKREEPSFPQSMSMSSNSLHKSCPLDFQ AQAPNCISLDGIEITLAPGVAKYLLLAIKDRIRHGRHFTFKAQHLALTLVAESVTGSA VTVNEPYGVLGYWIQVLIPDELVPRLMEDFCSAGLDEKCEPKERLELEWPDKNLKLII DQPEPVLPMSLDAAPLKM" mRNA 1217..1276 /gene="Su(fu)" /note="PEST region" /db_xref="FlyBase:FBgn0005355" BASE COUNT 491 a 473 c 479 g 420 t ORIGIN 1 ataaacagat gtaaatatac cacgcaagaa tactcatact gactggtggt ggtttaagct 61 atatgatata tattttcact gtttttctct acattttaaa aataagcaga aaaaagtaag 121 taggtaataa ttattataaa aaagttttga aaataaataa tggttttaaa agaaactcat 181 gtaagtttcc attgtcaaat ccgcacttta tatggcagta tttttattca tggatattca 241 agcggtggta ttccgcaacg ttccaactga ggtcatactg atcaaactgg atgaaatggc 301 cgaggcgaat ttggacaaaa aacctgaggt gaagcctccg ccgggcctta aggccatcat 361 agaccacctc gggcaggtgt accccaacca gccgaacccg ctgcaggtga ccacactgct 421 caagtactgg ctgggcggtc aggatccgtt ggactacatt agcatgtaca agtttcccgg 481 agatgtggat aggaacgttc cgccgcactg gcactacatt agtttcggac tcagcgacct 541 acacggggac gagcgagtcc acttgcgcga ggagggcgtc actcggtctg gcatggggtt 601 cgagttgacc tttcgcttgg ccaaaacaga aatagagcta aagcagcaga ttgagaaccc 661 ggaaaagccc caaagagcgc ccacctggcc ggcgaacctg ttgcaggcca tcggacgcta 721 ctgttttcaa acaggcaacg gattgtgctt cggagacaac atcccgtggc gcaagagtct 781 ggatggcagt accacttcca agctacagaa cctgctcgtc gcccaggacc cgcagttggg 841 ctgcatcgac actcccacgg gcacggtgga cttctgccag atcgtcggcg tctttgacga 901 cgaacttgag caggcatcgc gttggaacgg gcgcggtgtg ctcaacttcc ttcgccagga 961 tatgcaaact ggcggtgatt ggctggtgac taacatggat cgccagatga gcgtcttcga 1021 actgtttccc gaaacgctgc tcaacctaca ggacgatctg gagaagcagg gttccgatct 1081 ggccggcgtt aatgcagatt ttagcttccg tgagctgaaa cctaccaagg aggtgaagga 1141 ggaggtggat ttccaggcgc tgagcgagaa gtgcgccaac gacgaaaaca atcggcagct 1201 gacggatact caaatgaaac gcgaggaacc aagctttcca caatccatgt cgatgagcag 1261 caattcgctg cacaagtcct gtcccctgga ctttcaagcg caggcaccaa actgcatttc 1321 actggacggt attgagatta ctctcgcacc tggtgtggcc aagtacctcc tactggccat 1381 caaggatcgc atccgacatg ggcgccactt caccttcaag gctcagcatc tggcgctcac 1441 tttggtggcg gaatccgtca ccggctcggc ggtgacagtg aacgaaccgt acggcgtgct 1501 gggctactgg attcaggtcc tgattcccga tgaactggtg ccgcgcctga tggaagactt 1561 ctgcagcgcg ggcctagacg agaaatgcga gcccaaggag cgactggagc tcgagtggcc 1621 cgacaagaat ctgaagctga tcatcgacca gccggaacct gtgctgccca tgtcgctcga 1681 cgctgctcct ctgaaaatgt gatggtgtcc atcggttagc tagtagttat ttaaattaat 1741 cgaattgaat cttccactaa cgagtaagtt ttacatttat catctcatct aacacaatgc 1801 acgtggcctt tgctcctcgc cggagtccag tcaaaatata caacacatac tatacccgaa 1861 aaa // LOCUS DMTHB1 1941 bp DNA INV 18-OCT-1996 DEFINITION Drosophila melanogaster transposon HB1. ACCESSION X01748 NID g8693 KEYWORDS inverted repeat; terminal repeat; transposon; unidentified reading frame. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1941) AUTHORS Brierley,H.L. and Potter,S.S. TITLE Distinct characteristics of loop sequences of two Drosophila foldback transposable elements JOURNAL Nucleic Acids Res. 13 (2), 485-500 (1985) MEDLINE 85215492 FEATURES Location/Qualifiers source 1..1941 /organism="Drosophila melanogaster" /db_xref="taxon:7227" misc_feature <1..188 /gene="HB" /note="FB4 inverted repeat fragment" /db_xref="FlyBase:FBgn0001181" gene 1..1941 /note="HB element" /gene="HB" /allele="" /db_xref="FlyBase:FBgn0001181" repeat_unit 189..220 /gene="HB" /note="put. terminal inverted repeat" /db_xref="FlyBase:FBgn0001181" source 189..1841 /organism="Drosophila melanogaster" /transposon="HB1" CDS 575..1021 /gene="HB" /note="pot. open reading frame" /codon_start=1 /db_xref="FlyBase:FBgn0001181" /db_xref="PID:g8694" /db_xref="FLYBASE:FBgn0001181" /translation="MLILKLRKEGKTYKDIQKTLKCSAKMVSNAIKYKWKPENRGTKH KTTDIEDRRIVSYSKVYRFASFRDIKSELNLGISDVTIRRRLLNQNFSARSPRKVPLP SPRHIKARLSLAKTYLNWPVSKWRNILWTDGSKIMLFGGTGSLQYI" repeat_region 587..677 /note="imperfect direct repeat" repeat_unit 1810..1841 /gene="HB" /note="put. terminal inverted repeat" /db_xref="FlyBase:FBgn0001181" misc_feature 1842..>1941 /gene="HB" /note="FB4 inverted repeat fragment" /db_xref="FlyBase:FBgn0001181" BASE COUNT 670 a 328 c 351 g 592 t ORIGIN 1 taaataattt cgattgccca ccttttaaaa ctaaataatt tcgtttgccc atcctttaaa 61 attcattttt aacgtttgcc caccctttaa aatttgtttt gtaagatgtg gcgccaattc 121 agatatttta ggatcggcgg atagaagcac ttacttatat gatgatgatg aacatacata 181 gacataatat gtacagctgt gttcagaaaa atagcagtgc gaaggaaact aagtaataca 241 aaggtatttt tccatgtccc ttttcggaat cgacttttta ttcctcttat ttttgttaaa 301 tggaatgtgt agatagggaa aaaaagaaaa tccggtcagt ttttcttgtt atcctttttt 361 tatttacatt cttgagcaaa atcacaattt ttaggctgtt cataagaata gcagtgtctg 421 gttctgacca acgtaaagtc ccgaaatgat caatattttc taaaaagtga gtttggttaa 481 gttaattcgt atatttaaaa ggacaataaa ttaaaaaaat taaaaaaatt ttattttagt 541 gggtagagga cagcactact cccaggggaa aagaatgtta attcttaagc ttagaaagga 601 aggaaaaaca tataaggaca ttcaaaaaac ccttaaatgt tctgccaaaa tggtatccaa 661 tgccattaaa tataaatgga agcccgaaaa ccgtggtacc aaacataaaa ccacagatat 721 agaggatcga cgcattgttt cttacagcaa agtctatcgt tttgcatcct ttagggacat 781 aaagtctgag ctgaacttgg gaatcagcga cgttactatt cgtagacgac tactgaatca 841 aaatttcagt gcgaggagtc cacgaaaggt tcccctacct agcccaaggc atattaaggc 901 aaggttaagc ttagctaaaa cctacctaaa ctggccagtc tccaaatggc gtaatatcct 961 ttggactgat gggtcaaaaa tcatgctatt tggtggaact ggttcactac agtatatctg 1021 acgacctcca aacacggagt atcacccaaa acacccagtg aagactttca atcacggtgg 1081 acctaaaatc atggtatggg cttgtttttt ttataatggt atgagtcatg ctatggatta 1141 tgatttatgg tattatagac caaaacgcat atgtaaatat acttagtgat gtcttattgt 1201 catattctga ataaaatata cccttaaaat ggacattcca acaggataat gatcagaaac 1261 gcagatgtaa atcggctaag aataggttca cccaaaatag aatagatgca atgccgtggc 1321 aagcaccacc ttcccattta aacccgattg aaaacctgta tggggacatt aaacagtttg 1381 tgtcgaagaa gtccccgacg tctaagactc agatttggca agttgtgcag gatacatggg 1441 caaaaattcc tcccaaacct tgctaggact tggtggactt catgccgcgt gggtgtaagg 1501 ctgtgctggc taacaaaggc tatccagcca agtattaggc ccgaattaac atattaaaaa 1561 gaaaaactaa gttcgttcta ggtcaagtta aattttgtta ctattttttc atagcactgc 1621 tattttattg aacaccagaa tttctgccta tttattgttt taatctatat tttcgaaact 1681 attgaagaaa taaaagtgaa acatttgtta aattgtttga aatgaaatac ctaatgatat 1741 tattaaaaaa aaattcccat taaaactgta aatcatagga attttttatc ttaaactctg 1801 aagtccaaag cactgctatt attctgaaca cagctgtaca taacgaaata atttattttt 1861 aaagggtggg caaacgttaa aaatgaattt taaaggatgg gcaatcgaaa ttatttagtt 1921 ttaagagtgg gcaaacgaaa a // LOCUS DMTPOD 416 bp DNA INV 12-SEP-1993 DEFINITION Drosophila DNA for transposable element D near 3'end of dnc gene. ACCESSION X05643 NID g8714 KEYWORDS transposable element; transposable element D; unidentified reading frame. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 416) AUTHORS Pittler,S.J. and Davis,R.L. TITLE A new family of the poly-deoxyadenylated class of Drosophila transposable elements identified by a representative member at the dunce locus JOURNAL Mol. Gen. Genet. 208 (1-2), 325-328 (1987) MEDLINE 87286416 COMMENT Data kindly reviewed (15-Apr-1988) by Davis R.L. FEATURES Location/Qualifiers source 1..416 /organism="Drosophila melanogaster" /strain="450" /db_xref="taxon:7227" /clone_lib="(lambda)J1" /clone="450B" /map="dunce locus; coordinates 45-46" gene 1..416 /note="D element" /gene="D-element" /allele="" /db_xref="FlyBase:FBgn0000430" repeat_region 5..18 /note="direct repeat 1" CDS 71..145 /gene="D-element" /note="ORF (AA 1-24)" /codon_start=1 /db_xref="FlyBase:FBgn0000430" /db_xref="PID:g8715" /db_xref="FLYBASE:FBgn0000430" /translation="MLTLGLESKEDSSDTTLMTSLTWF" repeat_region 399..412 /note="direct repeat 1" BASE COUNT 167 a 78 c 54 g 117 t ORIGIN 1 aagcttttag ttctcatatt attacacccc aacagcctag caaggaagct aggaactgca 61 gctgtggtca atgctcaccc tcggactaga gtcaaaagaa gactcaagcg acaccaccct 121 catgacctcc ctaacctggt tttgacctag aaagtcttag ttttaaaatt cattagaata 181 atcaaataaa taataattac tatgttatat caactattat aattctccct atcattttta 241 ggattaaaaa tctgttagtc ttaagtaacc aagacacatt gtaaaataaa ataattttaa 301 gcagatcaaa ttaagttgcc gcatggtaac agtgcgtctg atcaaataat aaaaacatca 361 tcgtaatcga aaaaaaaaaa aaaaaaaaaa aaaaaaaatt ttagttctca tacgtc // LOCUS DMTRYAG 885 bp DNA INV 06-FEB-1995 DEFINITION Drosophila melanogaster alpha-gene for trypsin-like enzyme. ACCESSION X02989 NID g8741 KEYWORDS serine protease; signal peptide; trypsin; zymogen. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 885) AUTHORS Davis,C.A., Riddell,D.C., Higgins,M.J., Holden,J.J. and White,B.N. TITLE A gene family in Drosophila melanogaster coding for trypsin-like enzymes JOURNAL Nucleic Acids Res. 13 (18), 6605-6619 (1985) MEDLINE 86041859 FEATURES Location/Qualifiers source 1..885 /organism="Drosophila melanogaster" /db_xref="taxon:7227" promoter 13..19 /note="pot. TATA-box" gene 67..837 /note="&agr;Trypsin" /gene="&agr;Try" /allele="" /db_xref="FlyBase:FBgn0003863" CDS 67..837 /gene="Try" /codon_start=1 /product="trypsin-like enzyme" /db_xref="PID:g8742" /db_xref="FLYBASE:FBgn0003863" /db_xref="SWISS-PROT:P04814" /translation="MLKIVILLSAVVCALGGTVPEGLLPQLDGRIVGGSATTISSFPW QISLQRSGSHSCGGSIYSANIIVTAAHCLQSVSASVLQVRAGSTYWSSGGVVAKVSSF KNHEGYNANTMVNDIAVIRLSSSLSFSSSIKAISLATYNPANGASAAVSGWGTQSSGS SSIPSQLQYVNVNIVSQSQCASSTYGYGSQIRNTMICAAASGKDACQGDSGGPLVSGG VLVGVVSWGYGCAYSNYPGVYADVAVLRSWVVSTANSI" sig_peptide 67..132 /gene="Try" /db_xref="FlyBase:FBgn0003863" misc_feature 133..834 /gene="Try" /note="put. zymogen" /db_xref="FlyBase:FBgn0003863" mat_peptide 157..834 /gene="Try" /db_xref="FlyBase:FBgn0003863" /product="trypsin-like enzyme" polyA_signal 875..880 BASE COUNT 161 a 280 c 235 g 209 t ORIGIN 1 tagcgtgggc tgtatataag gttggacggg cggcatgtaa gccagcactt gttagcaacg 61 cccatcatgt tgaagatcgt gatcctcttg tccgccgtgg tctgcgccct gggaggcacc 121 gtccctgagg gactcctgcc tcagttggat ggccgcattg tcggcggctc tgctaccacc 181 atcagcagct tcccctggca gatctccctg cagcgcagtg gcagccactc ctgcggtgga 241 tccatctact ctgccaacat cattgtgacc gccgctcact gtctgcagtc cgtgtccgct 301 tcagtcctgc aggtccgtgc tggatccacc tactggagct ctggtggcgt cgtcgccaag 361 gtttcctctt tcaagaacca cgagggatac aacgctaaca ccatggtcaa cgacatcgct 421 gtcatccgtc tgagctcttc cctgagcttc agctcaagca tcaaggctat tagcctggcc 481 acttacaacc cagctaacgg agcctctgcc gccgtttccg gttggggtac ccagtcgtcc 541 ggatccagct ccatcccctc ccagctgcag tacgtgaacg tgaacatcgt tagccagagc 601 cagtgtgctt cctccaccta cggatacggt agccagatcc gcaacaccat gatctgcgct 661 gctgccagcg gcaaggatgc ctgccagggt gactccggtg gcccactggt ctccggcgga 721 gtcctcgtcg gtgttgtctc ctggggatac ggatgcgctt actccaacta ccccggtgtc 781 tatgccgatg ttgctgtcct ccgctcttgg gtggtgagca ctgctaacag catctaagct 841 ggtacccagt aggttggatg tgtcaaaagc cttcaataaa tattt // LOCUS DMU01335 1358 bp DNA INV 10-FEB-1996 DEFINITION Drosophila melanogaster ribosomal protein S2 (sop) gene, complete cds. ACCESSION U01335 NID g430713 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1358) AUTHORS Cramton,S.E. and Laski,F.A. TITLE string of pearls encodes Drosophila ribosomal protein S2, has Minute-like characteristics, and is required during oogenesis JOURNAL Genetics 137 (4), 1039-1048 (1994) MEDLINE 95073591 REFERENCE 2 (bases 1 to 1358) AUTHORS Laski,F.A. TITLE Direct Submission JOURNAL Submitted (08-SEP-1993) Frank A. Laski, Molecular Biology Institute, University of California at Los Angeles, 405 Hilgard Ave., Los Angeles, CA 90024-1570, USA FEATURES Location/Qualifiers source 1..1358 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone_lib="Statagene genomic library in lambda FIX II" /chromosome="2L" /map="30D/E" exon 114..148 intron 149..488 exon 489..1358 gene 490..1293 /note="string of pearls" /gene="sop" /allele="" /db_xref="FlyBase:FBgn0004867" CDS 490..1293 /gene="sop" /standard_name="string of pearls" /codon_start=1 /product="ribosomal protein S2" /db_xref="PID:g515972" /translation="MADEAPARSGFRGGFGSRGGRGGRGRGRGRWARGRGKEDSKEWV PVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQKQTRAG QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKP HTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGTLGN FAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFLSKPTPRLHADA" BASE COUNT 317 a 348 c 346 g 347 t ORIGIN 1 tttaaatatt tgtatatata tcgatttccc atacgatatt atgcttatcg atggtatcgg 61 cactatcgta agtgattgcc ccagctctaa gcggatggct cggcatttcg tttttgtctt 121 caccccaata aagttgatag acctacaagt aagcattttc gatgggatta tgtgggaaat 181 aaatggtgtt taatttaatc agcatgcgcc ataccacagt cagagttttt aaatatgcta 241 aaagctagct aaaagtgtaa aatccgtgtg atgggttgta tctttcgtaa aaatcaattg 301 tccctttggg gacacccacg tgttccaaaa tggcgactat atgtagtagg gttaacacct 361 ttactttatt ttgcggtagt cactatgaga cttgcggcta aagattaggt atctggcttg 421 ggagcagaaa atcttaggat ttacaataaa aaacgtgaac ctaacctatt tttttaactc 481 tctttcagaa tggcggacga agctccagcc cgtagtggat tccgtggcgg atttggctct 541 cgtggtggtc gtggtggacg cggtcgtggc cgtggacgct gggcccgtgg acgtggaaag 601 gaggactcca aggagtgggt gccagtgacc aagctaggac gcctggtgcg cgagggcaag 661 atcaagtctt tggaggagat ctacctgtac tcgcttccca tcaaagagtt cgagatcatc 721 gacttcttcc tgggatcctc gctgaaggat gaggtgctga agatcatgcc cgtccagaag 781 cagacccgtg ctggtcagcg tacccgtttc aaggccttcg ttgccatcgg cgacaacaat 841 ggccacattg gtctgggcgt taagtgcagc aaggaagtgg ccaccgccat ccgtggtgcc 901 atcattctgg ccaagctctc cgtggtgccc gtgcgccgtg gctactgggg caacaagatc 961 ggcaagcccc acaccgtgcc ctgcaaggtc accggcaagt gcggttccgt ctccgtgcgc 1021 ctcatccccg ctccccgtgg tactggcatt gtctcggccc ccgtgcccaa gaagctgctg 1081 accatggccg gtattgagga ttgctacacc tcggcccgtg gctccactgg aaccctcggc 1141 aacttcgcca aggctacata tgccgccatc gccaagacgt acgcgtactt gacccccgat 1201 ctgtggaagg agatgcctct gggctccact ccttaccagg catactcgga cttcctgtcc 1261 aagcccactc ctcgtctgca cgccgatgcc taaatgaaca ctttcgaggc caatcaatcc 1321 agagtttttg aataaagtca taaactttta aatgtaaa // LOCUS DMU03277 747 bp DNA INV 12-NOV-1993 DEFINITION Drosophila melanogaster Sevelin clone D69 cell cycle arrest protein gene, complete cds. ACCESSION U03277 NID g415629 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 747) AUTHORS Edgar,B. TITLE D69 JOURNAL Unpublished REFERENCE 2 (bases 1 to 747) AUTHORS Edgar,B. TITLE Direct Submission JOURNAL Submitted (05-NOV-1993) Bruce Edgar, Basic Sciences, Fred Hutchinson Cancer Research Center, 1124 Columbia Street, Seattle, WA 98104, USA FEATURES Location/Qualifiers source 1..747 /organism="Drosophila melanogaster" /strain="Sevelin" /db_xref="taxon:7227" /clone="D69" /clone_lib="REP-DM" /dev_stage="embryo" CDS 1..735 /note="cloned by ability to arrest the cell cycle when expressed in the fission yeast Schizosaccharomyces pombe" /codon_start=1 /db_xref="PID:g415630" /translation="MNSGSDTRLDEFKPNYIKFHTRNVGMSGIGLWLKSLRLHKYIEL FKNMTYEEMLLITEDFLQSVGVTKGASHKLALCIDKLKERPNILNRVEQELLSGQMEL STAVEELTNIVLTPMKPLESPGPPEENIGLRFLKVIDIVTNTLQQDPYAVQDDETLGV LMWILDRSIHNEAFMNHASQLKDLKFKLSKMKISMVPKMHHVKPAGVGPNNGNINKPR WNEIPRSERRRKMVYLVKNYKMNSAS" BASE COUNT 221 a 171 c 181 g 174 t ORIGIN 1 atgaacagcg gttccgatac tcgtctggat gaattcaagc ccaattatat taagttccac 61 acgcgcaacg tgggcatgtc gggaatcgga ctctggctaa aatccttgcg tctgcacaag 121 tacatcgagc tgttcaagaa catgacgtac gaggaaatgc tcttgatcac cgaggacttt 181 ctgcagagtg ttggcgtcac caagggcgcc tcccacaagc ttgccctttg cattgataag 241 ctgaaggaac ggcccaatat tcttaaccgg gtagaacaag aactgctatc gggtcaaatg 301 gagctgagca cggcggttga ggagctaaca aatattgtgc tgacaccaat gaagccactg 361 gagtctccag gaccaccgga ggaaaacatt ggtctgcgtt ttcttaaggt cattgacatt 421 gtgaccaata cgttgcagca ggatccgtat gctgtccaag acgacgagac tttgggtgtg 481 cttatgtgga ttctagaccg ttctatccac aacgaggcat ttatgaatca tgccagtcaa 541 ctcaaggacc tgaagtttaa gttgtccaag atgaagatct ccatggttcc caaaatgcat 601 cacgttaagc cagccggcgt cgggccaaac aatgggaaca ttaacaagcc aagatggaat 661 gaaatacccc gatctgaacg acgacgaaaa atggtttatc tagtaaaaaa ttataaaatg 721 aactctgcat cgtgaccatg agactga // LOCUS DMU03288 656 bp DNA INV 12-NOV-1993 DEFINITION Drosophila melanogaster Sevelin clone D52 cell cycle arrest protein gene, complete cds. ACCESSION U03288 NID g415631 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 656) AUTHORS Edgar,B. TITLE D52 DROME cell cycle arrest in S. pombe JOURNAL Unpublished REFERENCE 2 (bases 1 to 656) AUTHORS Edgar,B. TITLE Direct Submission JOURNAL Submitted (08-NOV-1993) Bruce Edgar, Basic Sciences, Fred Hutchinson Cancer Research Center, 1124 Columbia Street, Seattle, WA 98104, USA FEATURES Location/Qualifiers source 1..656 /organism="Drosophila melanogaster" /strain="Sevelin" /db_xref="taxon:7227" /clone="D52" /clone_lib="REP-DM" /dev_stage="embryo" CDS 1..654 /note="cloned by ability to arrest the cell cycle when expressed in the fission yeast Schizosaccharomyces pombe" /codon_start=1 /db_xref="PID:g415632" /translation="MENSRTPTNKTKITLNRTPTLKERRWNTLKVNTSNVRCSTPIFG NFRSPNLSPIENMGTKGKSPVSPMRFATFKKVPTKVHPKQQQQQQHQHCHRTQFKPPP FVLPKPQEEIIEPEREIKSCSSPDTCSDDSNMETSLALESRRRSIKASNHSYVVNHAA NVEQILMHMGLENYVTNFEEAHIDLVELASLERADLVKIGLNTDEDCNRIMDVLHTL" BASE COUNT 175 a 186 c 164 g 131 t ORIGIN 1 atggagaatt ctcgcacgcc cacgaacaag accaaaatta cgcttaatcg cacgccaacg 61 ctaaaggagc gcagatggaa caccctgaag gtgaacacct ccaacgtgcg atgctctact 121 ccgatctttg gcaacttccg ttcgcccaat ctctcgccca tcgagaatat gggcacgaag 181 gggaagagtc cagtgtcgcc catgcggttc gctaccttca agaaagtgcc aacgaaggtg 241 catcccaagc agcagcagca gcagcagcat cagcactgcc atcgcactca gtttaagccc 301 ccgccattcg tgctgcccaa gccgcaggag gagatcatcg aaccggagcg agaaataaag 361 agctgcagca gcccggatac ctgttcggat gactcgaata tggagacctc actggcgttg 421 gagtcgcgtc gtcgttccat caaagcatcg aaccactcgt acgtggttaa ccatgccgcc 481 aatgtggaac agattctcat gcacatgggc ctggagaact atgtgaccaa tttcgaagag 541 gctcacatcg atctggtgga actggcatcc ttggagcgtg ctgatcttgt taaaatcggc 601 ctaaataccg atgaggattg caaccgcatc atggatgtgc tccacactct ttaagt // LOCUS DMU05850 1910 bp DNA INV 04-MAY-1994 DEFINITION Drosophila melanogaster spatzle (spz) gene, complete cds. ACCESSION U05850 NID g458315 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1910) AUTHORS Morisato,D. and Anderson,K.V. TITLE The spatzle gene encodes a component of the extracellular signaling pathway establishing the dorsal-ventral pattern of the Drosophila embryo JOURNAL Cell 76, 677-688 (1994) MEDLINE 94170368 REFERENCE 2 (bases 1 to 1910) AUTHORS Morisato,D. TITLE Direct Submission JOURNAL Submitted (31-JAN-1994) Donald Morisato, Molecular and Cell Biology, University of California, Berkeley, Life Sciences Addition 555, Berkeley, CA 94720, USA FEATURES Location/Qualifiers source 1..1910 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /map="97E2-4" gene 865..1626 /gene="spz" CDS 865..1626 /gene="spz" /standard_name="spatzle" /note="spz is a maternal effect gene, has an N-terminal signal sequence, protein is secreted" /codon_start=1 /evidence=experimental /function="required for establishing the dorsal-ventral pattern of the Drosophila embryo" /product="secreted polypeptide" /db_xref="PID:g458316" /translation="MMTPMWISLFKVLLLLFAFFATYEAKEYERIIKELFTITNDEGV VLFNRTDTEVQSEQPIPPRHPSDTFVFPDSPIAKYRPPQSPARPLRNDTKEHNPCAKD ESQHLRNFCTNVDDYPDLSGLTHKLKNNFAKFFSNDLQPTDVSSRVGGSDERFLCRSI RKLVYPKKGLRADDTWQLIVNNDEYKQAIQIEECEGADQPCDFAANFPQSYNPICKQH YTQQTLASIKSDGELDVVQNSFKIPSCCKCALKTG" BASE COUNT 597 a 480 c 403 g 430 t ORIGIN 1 gagttgcctc ccagacgtcc tctcgctgtc gtgtgttctc gatcgcgaga aatccaaatc 61 gaaatcgcag tcgaaatcga acttggttaa tgcttaacac tctgcatgcc cgggagatat 121 ggtgaaactc tcgatctgac cggaaaatcc cagcgcgcgt cgctataaac acttaagatc 181 ggtggcagat ggtatcgggc ttgaggtcca taaaagcgca ttcatctcga gctttccgtg 241 tcactcaaag acggcgcaca gagccgaaaa gttgaagact cacatatcct gcgatcagct 301 acttggatag ccagcccatt gcccagttgc aagccaaatc ggttataaac gatatcaata 361 tcgcggcatt tcatcagagc aaccaaatcg aaccgatccg aaaacggttc cactaaagcg 421 gcgagacgga aactaaagtg aaaagcaaac cgactaattg aagtgtctgt ctgtgtgtct 481 cgcaaacgtg caaaggaaac aaacaaaacg gaatagccaa catatcacac agagccaccg 541 cacaaaatat ttataaataa ataagaggca acagtaacac cagctaccag tataaaggcc 601 cggcattaac atttagtcgt gccagtttgt ttatttttta tatacgcaaa gcccataaaa 661 aaaaaaaaaa acgcacagat cactaaaaaa caacagcagc cggcgctata ataacaaagt 721 tgtagaaata agaaaattgg tataagccgc caccgatccg ccaatcacct gctacatact 781 attactaatc cccgacgcag acgttcgccg tccgcagaat ctatatatat ttataaatcc 841 aattgattaa gcccgagatc gagcatgatg acgcccatgt ggatatcgct gttcaaagtc 901 ctgctgctgc tgttcgcctt ctttgccacg tacgaggcca aggagtatga acgtatcatc 961 aaagagcttt ttacaataac caatgatgag ggagttgtcc tctttaatag gacggacacg 1021 gaggtgcaat ccgaacagcc gatacccccc cgacatccat cggatacctt tgtcttcccc 1081 gattccccca tagccaagta tcggccacca caatccccag ctcgtccttt gaggaatgac 1141 actaaagagc acaatccctg cgccaaggat gaaagccaac accttagaaa cttctgcacg 1201 aatgtggacg actatccgga cctttcaggc ctcacacata agctaaaaaa caactttgcc 1261 aagttcttta gcaacgatct tcagcccacg gatgtgagct ctcgcgttgg tggctcagac 1321 gagcgattcc tttgcaggag catcaggaag ctggtgtacc caaaaaaggg cttgagggcg 1381 gacgacacct ggcagttaat tgtcaataac gatgagtaca aacaggccat ccagatcgaa 1441 gagtgcgaag gagcggatca accctgtgac tttgccgcca actttccgca gagctataat 1501 ccaatctgca agcagcacta cacacagcag accctggcca gcatcaagag tgatggcgag 1561 ctggacgtgg tgcagaattc cttcaagatc ccctcctgct gcaagtgcgc gttgaagact 1621 gggtgattct ggaaaatggg attctccagt cgatggctgc gacaatgtga tattgagcaa 1681 gaagtttcac ccaccacaga atggcaggcc aaactgatca gtggtcattg atttattcta 1741 taatctgctg aatccacaca tagaccaatg tgcatattaa tttagagctt taagtcgagt 1801 cattttaacc atattcgtgt catatattca tttttggctt ccacgtctaa tgcctaagct 1861 agaaatgcaa gtaattagtc ctagaataca aacaaaacaa aacacaaaac // LOCUS DMU10184 4378 bp DNA INV 14-JUN-1994 DEFINITION Drosophila melanogaster drosE2F1 protein (drosE2F1) gene, complete cds. ACCESSION U10184 NID g499103 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4378) AUTHORS Ohtani,K. and Nevins,J.R. TITLE Functional properties of a Drosophila homolog of the E2F1 gene JOURNAL Mol. Cell. Biol. 14, 1603-1612 (1994) MEDLINE 94158833 REFERENCE 2 (bases 1 to 4378) AUTHORS Nevins,J.R. TITLE Direct Submission JOURNAL Submitted (31-MAY-1994) Joseph R. Nevins, Genetics, Howard Hughes Institute, Duke University Medical Center, Durham, NC 27710, USA FEATURES Location/Qualifiers source 1..4378 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 702..3119 /note="E2f1" /gene="E2f1" /allele="" /db_xref="FlyBase:FBgn0011767" CDS 702..3119 /gene="E2f1" /codon_start=1 /product="drosE2F1" /db_xref="PID:g499104" /translation="MSKFFVNVAPINNSNSSSSHTTTSSNTQRHQQHQQHYGGSGTTG HTMVARRLNYDLHGGTTSINNNNNIVIKNESVDLDYDHVLSSSDSNSNGGVAAHLRDH VYISLDKGHNTGAVATAAAAATAGQTQQQLQQQHHHQNQQQRKATGKSNDITNYYKVK RRPHAVSDEIHPKKQAKQSAHHQTVYQKHTASSAPQQLRHSHHQLRHDADAELDEDVV ERVAKPASHHPFSLSTPQQQLAASVASSSSSGDRNRADTSLGILTKKFVDLLQESPDG VVDLNEASNRLHVQKRRIYDITNVLEGINILEKKSKNNIQWRCGQSMVSQERSRHIEA DSLRLEQQENELNKAIDLMRENLAEISQEVENSGGMAYVTQNDLLNVDLFKDQIVIVI KAPPEAKLVLPNTKLPREIYVKAENSGEINVFLCHDTSPENSPIAPGAGYVGAPGAGC VRTATSTRLHPLTNQRLNDPLFNNIDAMSTKGLFQTPYRSARNLSKSIEEAAKQSQPE YNNICDIAMGQHHNLNQQQQQQQQQLLQQPEEDDVDVELNQLVPTLTNPVVRTHQFQQ HQQPSIQELFSSLTESSPPTPTKRRREAAAAAIAAGSSTTATTTLNSHNNRNHSNHSN HSNHSSSNNSKSQPPTIGYGSSQRRSDVPMYNCAMEGATTTSATADTTAATSRSAAAS SLQMQFAAVAESNNGSSSGGGGGGGGYGSIAGAGANADPHQPYSHDRNSLPPGVADCD ANSNSSSVTLQGLDALFNDIGSDYFSNDIAFVSINPPDDNDYPYALNANEGIDRLFDF GSDAYGP" BASE COUNT 1472 a 1075 c 937 g 894 t ORIGIN 1 tttgttatta aaaatctcac gtgttaaaca acaagttttt cttcaaaatc tcattactgt 61 ttaagtgttt ctatttgaaa agtttgttca aaattgttct gcaacttatt actccagttc 121 ttaaaactat aatacactat tcttatacta tttaacaaaa gccaaattct tttaaagcaa 181 agtaacgctt aattatttat tataccctac tattacattt gaattaagtt tttgtaatta 241 cattagtata taactaagtt agttataaaa tcttataaaa ttcaattcga aattgctgcc 301 aaaaaaaaca ctttggatta tacaagaaaa ttgttcatca aggcttcaat tgtatgtgaa 361 gaatccttag gtgctaattt agttgataag cgcaaactgc aaagagagga agatagagag 421 cgattaacag aaacaggcag tacaataagt caatcgactc gagagctgga aattccgact 481 gggtggcaac ttttcgaagg cagtgcttaa aagtatgcta caatatagtg ccagcgattg 541 ccgactgagg cgaacctaac agaatcggca tatttataga atatatacag aagatatata 601 cacggagcaa agagagagag agagagagcg gaggagagag agggagagag caagagtcag 661 gcggagaatc gccgaggaat cacgatagaa ccggcagcga aatgtccaag ttctttgtga 721 atgttgcccc catcaacaac agcaacagca gcagtagcca cacaaccacc agcagcaaca 781 cccagcgcca ccagcagcac caacaacact atggcgggag cgggacaacc ggccacacga 841 tggtggcccg cagactcaac tacgatctgc acggcggcac caccagcatc aacaacaaca 901 acaacattgt gatcaaaaac gagtccgtcg acttggacta cgatcacgtc ctgagcagca 961 gcgacagcaa cagcaacggc ggcgtggcag cccacctgcg ggatcatgtc tacatcagtc 1021 tggacaaggg gcacaacacg ggggcagtgg caacagcagc ggcggcggca acggcgggcc 1081 aaacgcagca gcaactgcag cagcagcacc accaccaaaa tcagcagcaa cgcaaggcga 1141 ccggcaaatc caacgatatc acaaattatt acaaggtcaa acgtcggcca cacgccgtca 1201 gcgatgagat tcacccgaag aagcaggcca agcagagcgc ccaccaccag acggtgtatc 1261 agaagcatac ggctagcagt gcgccccagc agctccggca cagccaccac cagctgcgcc 1321 acgacgcgga tgccgaactg gacgaggatg tggtggagcg ggtggccaag ccggcatcgc 1381 atcacccctt ttcgctgtcg acgccccagc aacagttggc tgcgtcggtg gccagcagtt 1441 cctcgagcgg agatcgcaat cgggcggaca cctcgctggg aatactgacc aaaaagtttg 1501 tggacctgct gcaggagtca ccggatggcg tggtggatct gaacgaggcc tccaatcgat 1561 tgcacgttca gaagcggcgc atctacgaca ttaccaatgt cctcgaaggc attaacatcc 1621 tggagaagaa gtcgaagaac aacatccagt ggcgctgcgg gcagtcgatg gtcagccagg 1681 agcgttcccg tcacatcgaa gcggattcgt tgcggctgga gcaacaggag aacgagctga 1741 acaaggccat cgatctgatg cgcgagaatc tggctgagat ctcccaggag gtggagaact 1801 ccggcggcat ggcctacgtc acgcagaacg acctgctcaa cgtggatctc ttcaaagatc 1861 agatcgttat cgtgatcaag gcgccgccag aggctaagct tgtgctgccc aacacaaaat 1921 tgccgcgcga gatttacgtg aaagcggaga acagcgggga gatcaacgtc ttcctctgcc 1981 atgacacctc accggaaaat tcgccaatcg cgccgggcgc cggctacgtt ggagcacccg 2041 gtgcaggatg cgtccgtacg gccacctcca cacgactgca tccgttgacc aaccagcgac 2101 tgaacgatcc gctcttcaac aatatcgatg ccatgagcac caagggatta tttcaaacgc 2161 cctaccgctc ggctcgcaac ctcagcaaat cgattgagga agccgccaag cagtcccagc 2221 ctgaatataa taacatttgt gatattgcga tgggccagca tcataatctg aaccagcagc 2281 agcagcagca acaacaacag ttgctacagc agccggagga ggacgatgtg gacgtggagc 2341 tgaaccagct ggttccgaca ctgacgaatc ctgtggtccg gacccatcag ttccagcagc 2401 accagcagcc ctccatccag gagctgttca gcagcttaac agaatcctcg cctccaacgc 2461 ccaccaagcg gcgtcgggag gcagcagccg cagcaattgc cgcaggcagc tcaacaacag 2521 caaccactac gcttaatagt cataacaaca gaaaccacag caatcatagc aaccacagca 2581 accatagcag cagcaacaac agcaaatccc aaccacccac aataggctac ggcagcagtc 2641 agcgacgcag cgatgtgccc atgtataatt gtgcaatgga aggcgcaacc acaacatctg 2701 caacagcaga tacgacagct gccacatcgc gatcggccgc agcaagctca ctgcagatgc 2761 aattcgctgc cgtcgcggag agcaacaacg gcagtagcag cggcggtggt ggcggcggcg 2821 gcggctatgg cagcatcgct ggcgctggcg ccaacgctga tccccatcag ccgtacagcc 2881 atgaccgcaa cagcctgccg cccggcgtgg ctgactgcga tgccaacagc aacagcagca 2941 gtgtcacgct gcagggcctc gatgctctct tcaacgacat tggctcggac tacttcagca 3001 acgatatcgc ctttgtgtcc atcaatccgc cggacgacaa tgactatccg tatgcgctga 3061 acgcgaacga gggcatcgat cggctgtttg acttcggttc ggatgcctat ggaccctaag 3121 aggagacgtc cacgaacaca atcacaacca cacacacaca cacacatgtc tacaaaattg 3181 ggattctggg ggtgtttata attttaaatt atatacaaat ggcaaaagaa aaaaaaagat 3241 acaaagccag ccagcaaatt attaaattat ttgattgcaa atactagaag ccacaaaaaa 3301 tccaaaaaca aaacacaaaa aaaagcgaat cagcaaaact taatgaaact aagttgtgtg 3361 tacaatttta agcgtaaaaa tatatacatt taaatttata acccaaacta atttaagcga 3421 aacaaaacga aaacactaaa tctactttac aaaaactcag cctcacgaga gaaataggga 3481 gaagtcgtag caagaagagc cacattttat aagcaaattt taattttagc ctttaaaaga 3541 aagcaaaaag aatcaggaat actatttaaa cgattggata acacacaaaa aatgcgaata 3601 cttccctctt atcaaacaac tttttgggct agaactgtct gtaaattagt aaaaataata 3661 ccaacacaca cacacacaca cacttatata attttaaatt ataaaacaaa atagttgtaa 3721 agccaatcaa cattaaacaa taaaaagaaa atcaatttca aattgtaaaa tatatcgaag 3781 acatttcaaa ttaatatgga gcagtagtag aagaggaaga gaacactcct gggcccccaa 3841 caagatggct ttggttcctg ttttagtgac gcatgcaaca gaatcctctt ctcttcattt 3901 gcttggattt atcgattgat ttttaattat aatattatta aagctataac tatgtatcat 3961 aatttgttat tgttataaaa tttaaactgt aaacacacac atgggcccaa tagcagttta 4021 ttcatagaag ccaaatcatc ccacaaaaca aacaaccaac cacttaacag agtcaactac 4081 aagtacataa ataattattt aaactctctc ctagtagtta tatatttaac taaacgatag 4141 ataaaagcaa caaacaaatg caaatcatac aattgttaaa aaaaatcaat aaataaacga 4201 aggagaaccg caacaagccg aaaccactgt ataattgtac gtttaatttt tataagagaa 4261 aacacacttg ttaggtactt ttctttcttt ccaaaaacaa acacatgaaa aaaagagaaa 4321 ataaatatta caaaaacgaa ggaaacttta aaataaacaa aataaatttt taaaaccg // LOCUS DMU13014 2474 bp DNA INV 30-MAR-1995 DEFINITION Drosophila melanogaster phosphorylase kinase gamma gene, complete cds. ACCESSION U13014 NID g531470 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2474) AUTHORS Bahri,S.M. and Chia,W. TITLE DPhK-gamma, a putative Drosophila kinase with homology to vertebrate phosphorylase kinase gamma subunits: molecular characterisation of the gene and phenotypic analysis of loss of function mutants JOURNAL Mol. Gen. Genet. 245 (5), 588-597 (1994) MEDLINE 95107257 REFERENCE 2 (bases 1 to 2474) AUTHORS Bahri,S.M. TITLE Direct Submission JOURNAL Submitted (05-AUG-1994) Sami M. Bahri, Institute of Molecular & Cell Biology, National University of Singapore, 10 Kent Ridge, Singapore 0511, Singapore FEATURES Location/Qualifiers source 1..2474 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone_lib="cDNA PNB40" /map="10D1-2 (X-chromosome)" /dev_stage="12-24h embryos" CDS 672..2354 /codon_start=1 /product="phosphorylase kinase gamma" /db_xref="PID:g531471" /translation="MAKDEEDDLLPDKDAAKGFYAKYEPKEILGRGISSTVRRCIEKE TGKEFAAKIIDLGATTESGETNPYHMLEATRQEISILRQVMGHPYIIDLQDVFESDAF VFLVFELCPKGELFDYLTSVVTLSEKKTRTIMRQIFEGVEYIHAKSIVHRDLKPENIL LDENHNVKITDFGFAKAVARGREITNLCGTPGYLAPETLKCNMFEGSPGYSQEVDIWA CGVIMFTLLVGCPPFWHRKQMVMLRNIMEGKYSFTSPEWADISEDPKDLIRKCLVVDP SQRITVKEVLRHPFFNQMVLMGDRRHPAPPIAPAQTNSRHLLQPEASSYRFGQLNSSC AGAPNYLYCAPQSSYSSNRMRDGALDDAGASAASATCHVMSPSNASNSYATNTTANTS NSALASASSHKTLTAMVYYQQQPQQHQTQQQQQQYQQQQTTQLPVQLQLPNPLLQTGG DGKQSVYAPPTVQLRKQSRFNARKKFQFAILVIRAIIRIRRLRFTAEPLHVEEAIRDP YRVKVMRKVIDGCACRVYGHWVKKGEGQDRAALFENTPRTELHALYINNLSR" BASE COUNT 658 a 675 c 654 g 487 t ORIGIN 1 ggtgattgtg tcaaaaatac agggttttat tgttgcacta gcaatttaat ccgaggaata 61 taaattttgt gtggagttat gttcgagacg tcgttgccag cgattcttga ggcgagcggt 121 cacacgtttg gcattcgtta ttaattaaat cagccgccaa cagctgaaca gctgagcgag 181 agagcaatcg agagcgacag gagaggatcc acttccaatc gaatcgggtg gaatcgaata 241 gcaggggctt ggtaattaaa aggaagaccg aactgaactg aactaaactg aaacggaagc 301 gaagcgaagc gaagcgcggc gagggcggca agaaacgaaa agaaaagaac gaaagtcggc 361 agagtcggaa agtcggcaag tctgattgtc ggcaaagtcg caaagtcgga gagtcacagt 421 ctcaatcgca gtcggcgaga gattccactc gtgtcgcacg tccgttcgtt tccacattgt 481 cgttataaaa atagcaacgc cttaaacgat cgcatcaacc tcatcaacag aacaccacca 541 gaaatcaccg ccccctccta cgcctcaatc gccatcgcca ccgcatccca tccccatcat 601 cttcattagc aggcagcctg acagaattcc aaactgccgt ttcggcagcc ggcaagattt 661 cacgaaatct aatggccaag gacgaggagg atgatctgct gcccgacaag gatgcggcca 721 agggcttcta tgccaaatac gagcccaagg agattctggg caggggcatc agttcgaccg 781 tgaggcgatg tatcgaaaag gagacgggca aggagtttgc cgccaagatc atcgacttgg 841 gcgccaccac agagtcaggc gagacgaatc catatcacat gctggaagca accagacaag 901 aaatctcaat actgcgccag gtcatggggc atccctacat aattgatctg caggatgtgt 961 tcgagtcaga tgcatttgtt ttcctcgtct tcgagctgtg tcccaaaggt gaactcttcg 1021 actatctgac ctctgtggtg acgctatccg agaagaagac gcgcaccatt atgcgacaaa 1081 tctttgaggg cgtcgagtac atacacgcga agagcattgt ccatcgggat cttaagcccg 1141 agaatatctt gctggacgag aaccacaacg ttaagatcac ggattttggc ttcgccaaag 1201 cagttgcaag agggcgagaa attacaaatc tgtgcggaac gccgggttat ttggctcccg 1261 aaacgctcaa gtgcaacatg ttcgagggat cccccggcta ctcgcaggaa gtcgacatat 1321 gggcctgtgg cgtgattatg tttacgctgc tcgtcggttg tccacctttc tggcaccgca 1381 agcagatggt catgctgcgg aatatcatgg agggcaagta cagcttcacc tcgccggagt 1441 gggctgatat ttcagaggat cccaaggatc tgatacgcaa atgtctagtc gttgatcctt 1501 cgcaacgtat aaccgtcaag gaagtattaa gacatccatt cttcaaccaa atggtgttaa 1561 tgggtgatcg ccggcatccg gccccgccca tcgcgcccgc ccaaacgaac agcaggcatc 1621 tgctgcaacc cgaggcgtca tcgtatcgct ttggtcagct gaacagtagt tgcgccggtg 1681 cccccaatta tctgtactgt gcgccacaga gctcctactc gtcgaatcga atgcgcgacg 1741 gggcgctgga cgatgcgggt gccagtgctg catccgccac ctgccatgtc atgtcgccat 1801 ccaacgcctc caattcctac gccaccaaca ccacagccaa cacctcgaac tcggccttgg 1861 catccgcctc ctcccacaaa acgctcacgg cgatggtcta ctatcagcag caaccgcagc 1921 agcatcagac gcagcagcag cagcaacagt accagcagca acagacgaca cagctgccgg 1981 tgcagctgca gttgccgaat ccactattgc agaccggtgg cgatggcaag caatcggtgt 2041 atgcacctcc tacagtgcag ctgcgcaaac aaagtcgctt caacgcgcgc aaaaagttcc 2101 aattcgccat actcgtgata cgggccatca ttcggatacg gcgcctacgc ttcaccgccg 2161 agccgctgca cgttgaggag gccatccggg atccgtatcg cgtcaaggtt atgcgcaagg 2221 tcatcgatgg ctgtgcttgc cgtgtctacg ggcattgggt caagaagggt gagggccaag 2281 atcgggccgc cctcttcgag aatactcccc gcacggagct ccacgcgctc tacatcaaca 2341 atctcagccg atagaaggcg gtcgggcatg gggcatgggc caatgggcca tggggaatgg 2401 ggcgtggcgg agtcgcgctg atctacacaa gcacacacac acacacacac acagaaagaa 2461 agaaaaaaaa aaaa // LOCUS DMU18130 3652 bp DNA INV 15-FEB-1995 DEFINITION Drosophila melanogaster masquerade (mas) gene, complete cds. ACCESSION U18130 NID g665544 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3652) AUTHORS Murugasu-Oei,B., Rodrigues,V., Yang,X. and Chia,W. TITLE Masquerade: a novel secreted serine protease-like molecule is required for somatic muscle attachment in the Drosophila embryo JOURNAL Genes Dev. 9 (2), 139-154 (1995) MEDLINE 95154720 REFERENCE 2 (bases 1 to 3652) AUTHORS Murugasu-Oei,B. TITLE Direct Submission JOURNAL Submitted (05-DEC-1994) Bernadette Murugasu-Oei, Institute of Molecular and Cell Biology, National University of Singapore, 10 Kent Ridge Crescent, Singapore, 0511, Republic of Singapore FEATURES Location/Qualifiers source 1..3652 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3L" /map="3L; 64B" gene 180..3323 /note="masquerade" /gene="mas" /allele="" /db_xref="FlyBase:FBgn0011653" CDS 180..3323 /gene="mas" /note="similar to the trypsin family of serine proteases including canine chymotrypsinogen, Swiss-Prot Accession Number P04813, but does not contain a serine catalytic residue" /codon_start=1 /function="required for somatic muscle attachment in embryo" /product="masquerade" /db_xref="PID:g665545" /translation="MPRHSSTMSRLVLPLIFSILLVSKPSPSQAQDESLAGSFLSGLL DTITSTADSKDCPGVCVHTLATLICYEVLDDVACPSPSMKCCIENAPAGKNATAVRAT TTPKTTTTASTTTTQRTTTTVATTSTTKRTTTTSTTPKPKPKPQTKRPATSSTTKPTA ATTKKPSTTKKVATAKPKDKEEATKADDANKDCTGVCVADRIAEYCEAYLTSDGLCKE GTKCCVSLDEYSNGKLPKDIYIPAKHMSKLKPNQTLSEKSAPAKSSSTSTTSTTTTTS TTTTPEPARINNSCPKPTKHKKHPTTTTTEAAEEEEEQETEEDGEEEEPPLSNKLKSG QGQGQVLKECEGECMNGIFAIFCDDIDSDAFCPGEGSCCVTGGASEATPSSKAPPTKP AIKHAPKPAAKPARPASPPPAPPSSTSGGGGGGDFLSQIISFAESTLNSPSPPPPPPQ APIQVPRCPGFCLLNIMAAFCERPSVLVSTPTTCAKGSVCCDNSRAGAPKPKLPPPTP SPTASPTAPPYVLPNTPSPDPREECPGSCIVSLLSFTCFKNAEMTDLFRCKRSGQICC APKSKILEKQQFQTRNDTAYYPAPPPPPIGPPQAYPPQTPPYSYMNNPPPQGPPPQMA PHHPNPYQPPPPAPNYADYYPVWPPGLPPQPQPPMTTPPTTTTTTTTPRPHVYSKYVC GVKGTLRTGRSQALSFVSYARAKYGVQRTACQMTSAAGYSPNFNKSNERLVLGSAIVP IQIHNDKLGDLVESSSLQSNQLRSYHNHQAQADQPDLVYPEYYQQRSLYGLQSNFSGR RRARVVGGEDGENGEWCWQVALINSLNQYLCGAALIGTQWVLTAAHCVTNIVRSGDAI YVRVGDYDLTRKYGSPGAQTLRVATTYIHHNHNSQTLDNDIALLKLHGQAELRDGVCL VCLPARGVSHAAGKRCTVTGYRYMGEAGPIPLRVREAEIPIVSDTECIRKVNAVTEKI FILPASSFCAGGEEGHDACQGDGGGPLVCQDDGFYELAGLVSWGFGCGRQDVPGVYVK TSSFIGWINQIISVNNL" BASE COUNT 957 a 1090 c 878 g 727 t ORIGIN 1 agtcggcttt tggctttcgc aaggtgcagt cgcgtcgtga tcgcatcctc cagatactat 61 atatacagat actatatata tacacacaaa agagataccg aggatcgttc taatttaaac 121 agaaaccttt attcttggta agaaatgaac acgtgctgac cattttggac caacgaatta 181 tgccaagaca ttcgagcaca atgagccgcc ttgttctgcc cctgatcttc agcattttgc 241 tggtcagtaa gccatcgcca tcacaggctc aggatgaatc cctggctggc agtttcctat 301 caggtctttt ggacaccata acgagcaccg cagactccaa ggattgccct ggagtatgtg 361 tccacacttt ggcaacttta atttgctacg aagttctaga cgatgtggct tgtccttcgc 421 ccagcatgaa atgctgcata gaaaatgctc cagccggcaa gaatgccact gctgtgagag 481 caacaacaac gcctaaaacc acaaccactg ctagcaccac taccacccag agaaccacca 541 ccacggtggc cactactagc accacaaaga gaaccaccac aacgagcacc actccaaaac 601 caaaaccaaa gccacagacc aagcgacctg ccacgagctc caccacaaaa cccactgcgg 661 ccaccacaaa gaaaccgagc accaccaaga aagtggctac ggccaaaccc aaggacaagg 721 aggaggccac caaggccgat gatgcaaaca aagactgcac tggagtttgc gtggccgatc 781 gcatagcgga gtactgtgag gcctatttga ccagcgatgg actgtgcaag gaaggcacca 841 agtgctgcgt ctccctggat gagtattcca atggcaagct gcccaaggat atctatattc 901 cagccaaaca tatgagcaag ttgaagccca accagacgct gtccgaaaaa tcggctcccg 961 ccaagagttc cagtacgtcc acgacgtcca ctactaccac caccagcact accacaacac 1021 ccgaaccggc tagaataaac aacagttgtc cgaagcccac caaacacaag aagcatccga 1081 ccaccacaac gacggaggca gccgaggaag aggaggagca ggagacggag gaggatggcg 1141 aggaggagga gccaccactg agcaacaagc tgaagtccgg acaaggtcag ggtcaggtgt 1201 tgaaggaatg cgagggcgag tgcatgaatg gaatatttgc gatcttctgt gatgacatcg 1261 attccgatgc tttctgtccc ggagaaggaa gctgttgtgt gactggaggt gcctcggagg 1321 caacaccctc ctccaaggct ccacccacca agccggccat caagcatgct cccaagccag 1381 cagccaagcc cgctcgtccc gcgtctccac cgccagcacc accatcttcg acctctggag 1441 gcggaggagg tggtgacttc ctctctcaaa tcatatcctt tgcggagagc actctgaact 1501 cgccatctcc accaccgcca ccacctcagg ctccgattca ggtgcctcgc tgtccaggat 1561 tctgtctgct caacattatg gccgccttct gcgagagacc ctcggtgctg gtttccacac 1621 ccacaacgtg tgccaagggt tcggtatgct gcgacaactc aagagccgga gctcccaagc 1681 ccaagttgcc accaccgacg ccgtcgccca cggcctcgcc cactgctcca ccatatgtcc 1741 tgcccaatac cccgagtccc gatccgcgag aagaatgccc aggatcctgt atcgtcagcc 1801 tgctcagctt cacttgcttc aaaaacgccg agatgactga cttgttccgc tgcaagcgtt 1861 ccggccagat ttgctgtgcg cccaagagca agatccttga gaagcagcag ttccagacgc 1921 gcaacgacac cgcctactac ccggcaccgc cgccaccgcc cattggtcca ccacaggcat 1981 atcccccaca gacaccaccc tactcctaca tgaacaatcc accgccacag ggacctccac 2041 cccagatggc gcctcaccac cccaatccct accagccacc gccaccggcg cccaactacg 2101 cagattacta tccagtttgg ccaccgggac tacctccaca acctcagcca ccgatgacca 2161 cgcctccgac gacaactaca accaccacga ctccacggcc acatgtctac tccaagtatg 2221 tgtgtggtgt gaagggaact ctgcgaacgg gaagatccca ggctctatct ttcgtctcct 2281 acgcccgtgc caagtacgga gtacagagaa cagcttgcca gatgacctcc gccgccggat 2341 actctcccaa cttcaacaaa tccaatgaga gattggtcct aggatccgcc attgtgccca 2401 tccagattca caacgacaaa ctgggtgacc tagtggagtc cagcagtcta cagagcaacc 2461 aattacgttc gtaccacaat caccaagctc aggcagatca gccggatctg gtctatccgg 2521 aatactacca acagaggtct ctttacggac tccagtcgaa cttcagcgga agacgaaggg 2581 cacgagtggt gggaggagag gatggcgaga atggagagtg gtgctggcag gtggctttga 2641 tcaattcctt gaatcaatat ctatgtggag ctgctttaat cggaacccag tgggttctta 2701 ccgcagccca ttgtgtgacc aacattgttc gttccggaga tgctatctac gtgcgggttg 2761 gtgattacga tctaacccgg aaatacggca gtccaggagc acagacattg cgcgtggcca 2821 ccacctacat tcatcacaac cacaatagcc agactctgga caacgatatt gctctcctga 2881 agctccatgg tcaagcggag cttcgagatg gagtgtgctt ggtgtgtctt cctgcacgag 2941 gagtcagcca tgcggcgggc aagcgatgca cggtgaccgg atacagatat atgggtgaag 3001 ctggtcccat tcccctgcgc gtgcgtgagg cggaaattcc gatcgtgagt gatacggagt 3061 gcatccggaa ggtgaacgcc gtgacggaga agatcttcat cctgcccgcc tccagtttct 3121 gtgccggcgg agaggaggga cacgatgcct gccagggcga tggaggtggt ccactagttt 3181 gccaagatga tgggttctac gagctggccg gcctcgtctc ttggggattc ggctgcgggc 3241 gacaggatgt gcccggcgtc tatgtgaaga cgtcctcgtt catcggctgg atcaaccaga 3301 tcatcagcgt gaataactta tagtgaggaa tctcgcaaag gacacactga caccatgtgc 3361 gggaggaacc ccgctcttgt ggcgatttcc aggactgacg actagcctgg tgtagcctac 3421 gattgtttcc aggggttccc gctcttcgac tgctaacgta actccatcct agtgtaatct 3481 attcatacct aaacctaact ctaatgactc caaatccaga aagcaactat attaactatt 3541 atgattatcg gtagcgtaga cggcaatctt taaaagtatt cccctatttg ataacgccct 3601 atggtaaaat atttttgtat atacaaaata aatacaaaat cttcagttat at // LOCUS DMU18307 3344 bp DNA INV 17-APR-1998 DEFINITION Drosophila melanogaster heat shock locus (hsr-omega), omega-pre-c, omega-c and omega-n transcripts and omega-ORF, complete cds. ACCESSION U18307 NID g604428 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 538 to 2457) AUTHORS Garbe,J.C., Bendena,W.G., Alfano,M. and Pardue,M.L. TITLE A Drosophila heat shock locus with a rapidly diverging sequence but a conserved structure JOURNAL J. Biol. Chem. 261 (36), 16889-16894 (1986) MEDLINE 87057398 REFERENCE 2 (bases 1 to 2472) AUTHORS Garbe,J.C., Bendena,W.G. and Pardue,M.L. TITLE Sequence evolution of the Drosophila heat shock locus hsr omega. I. The nonrepeated portion of the gene JOURNAL Genetics 122 (2), 403-415 (1989) MEDLINE 89357452 REFERENCE 3 (bases 688 to 771) AUTHORS Fini,M.E., Bendena,W.G. and Pardue,M.L. TITLE Unusual behavior of the cytoplasmic transcript of hsr omega: an abundant, stress-inducible RNA that is translated but yields no detectable protein product JOURNAL J. Cell Biol. 108 (6), 2045-2057 (1989) MEDLINE 89291945 REFERENCE 4 (sites) AUTHORS Hogan,N.C., Slot,F., Traverse,K.L., Garbe,J.C., Bendena,W.G. and Pardue,M.L. TITLE Stability of tandem repeats in the Drosophila melanogaster Hsr-omega nuclear RNA JOURNAL Genetics 139 (4), 1611-1621 (1995) MEDLINE 95309676 REFERENCE 5 (bases 1 to 3344) AUTHORS Pardue,M. TITLE Direct Submission JOURNAL Submitted (07-DEC-1994) Mary-Lou Pardue, Massachusetts Institute of Technology, Biology, Bldg 68-670, 77 Massachusetts Ave, Cambridge, MA 02139, USA FEATURES Location/Qualifiers source 1..3344 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /clone="cDRM6" /clone_lib="cosmid" /map="93D6-8" /chromosome="3R" /germline gene 1..3344 /note="Heat shock RNA 93D" /gene="Hsr93D" /allele="" /db_xref="FlyBase:FBgn0001234" promoter 265..278 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" promoter 274..287 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" promoter 317..330 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" promoter 327..341 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" promoter 337..350 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" promoter 510..524 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" /function="possible heat shock element" TATA_signal 539..543 /gene="Hsr93D" /db_xref="FlyBase:FBgn0001234" misc_RNA 571..2457 /gene="Hsr93D" /note="can be terminated at either the first or second polyadenylation site" /product="omega-pre-c transcript" /db_xref="FlyBase:FBgn0001234" misc_RNA 571..>3344 /gene="Hsr93D" /note="continues through >5 kb of tandem repeats (some are GenBank Accession Nos. M14578-M14583) and then terminates in GenBank Accession No. U02277." /product="omega-n transcript" /db_xref="FlyBase:FBgn0001234" exon 571..1044 /gene="Hsr93D" /citation=[1] /db_xref="FlyBase:FBgn0001234" /evidence=experimental /product="part of omega-n, omega-c and omega-pre-c RNAs" misc_RNA 571..1044 /gene="Hsr93D" /note="can be terminated at either the first or second polyadenylation site" /product="omega-c transcript" /db_xref="FlyBase:FBgn0001234" misc_RNA 571..2473 /gene="Hsr93D" /note="can be terminated at either the first or second polyadenylation site" /product="omega-pre-c transcript" /db_xref="FlyBase:FBgn0001234" CDS 688..771 /gene="Hsr93D" /note="omega-ORF; evidence of in vivo translation but product apparently does not survive for any time; no product detected in vivo." /citation=[3] /codon_start=1 /db_xref="FlyBase:FBgn0001234" /function="proposed that act of translation, not product, important" /evidence=experimental /db_xref="PID:g604429" /translation="MEKCKNRVPADEQQQYEYCKMQGQGPT" intron 1045..1757 /gene="Hsr93D" /note="Intron is removed from omega-pre-c to make omega-c. It is never removed from omega-n." /citation=[1] /db_xref="FlyBase:FBgn0001234" misc_RNA 1758..2473 /gene="Hsr93D" /note="can be terminated at either the first or second polyadenylation site" /product="omega-c transcript" /db_xref="FlyBase:FBgn0001234" misc_RNA 1758..2457 /gene="Hsr93D" /note="can be terminated at either the first or second polyadenylation site" /product="omega-c transcript" /db_xref="FlyBase:FBgn0001234" exon 1758..2473 /gene="Hsr93D" /note="Exon is an internal part of omega-n but alternative termination/polyadenlyation makes it 3' end of omega-pre-c and c. Polyadenylation can also occur at nt 2457 to give a shorter omega-pre-c and c." /citation=[1] /db_xref="FlyBase:FBgn0001234" /product="exon present in omega-c, omega-pre-c, and omega-n" exon 1758..2457 /gene="Hsr93D" /note="Exon is an internal part of omega-n but alternative termination/polyadenlyation makes it 3' end of omega-pre-c and c. Polyadenylation can also occur at nt 2457 to give a shorter omega-pre-c and c." /citation=[1] /db_xref="FlyBase:FBgn0001234" /product="exon present in omega-c, omega-pre-c, and omega-n" polyA_signal 2431..2436 /gene="Hsr93D" /note="first of two signals used for omega-pre-c" /db_xref="FlyBase:FBgn0001234" polyA_signal 2455..2460 /gene="Hsr93D" /note="second of two signals used for omega-pre-c" /db_xref="FlyBase:FBgn0001234" misc_feature 2474..3344 /gene="Hsr93D" /note="This is the region between the termination of omega-pre-c (and omega-c) and the start of the regular tandem repeats of omega-n" /citation=[4] /db_xref="FlyBase:FBgn0001234" /evidence=experimental BASE COUNT 1080 a 680 c 615 g 969 t ORIGIN 1 atcgatattc tttcgttaaa ttcggcatgg aaaaagcaac cctgtgaatc aataaaaaaa 61 agcatgcggt ccctctctcg aaaactgaac attatttgtc tccttctgga tatttccatt 121 ctacactaat caacaagaat tgctttattt ttttcgaaag cgatgtacat ttgtacataa 181 tatatatatt ttttccgcat ttgtttattg taaccacata gctttagagc agtaattaaa 241 gcataagaaa gaatatcgct gaagcacgaa attcttagac attatatgtg tgcatattca 301 gatttggtta gtatgtgcag tagtttccag aacacaagag aaaaatccat atgtatgtgc 361 ttaaccggct tacccacctt tctcacgaaa tgagggtagt ttttgtagca cagtgatgta 421 gacactcgtg agaaaccgta ggagcacgta tacgatgtat gtatatagtg tactcgctcc 481 aaccccaatg ccgcagaccc gagagacagg cagatttttc ccgaacccag cggttgggta 541 taaatagagc cgcctcagtc cggtcacgtc actctcaaat gaaaagtgtt caagtgcatt 601 caaagtgaag ctgaaaaaat aaccagttaa aaatagtaca aagaaatttt ctttcttgca 661 atttgcaagc agtagctaca accaaaaatg gaaaagtgta aaaatcgtgt cccagcagac 721 gagcagcagc agtacgagta ttgcaaaatg caggggcaag ggcccacgta gtatttttcc 781 acgtcgggca tttaatgctc tcgagttgga aacaaagaaa ccatacgcaa accccctgga 841 aaagatgtga ttagtcatcg attttgctgg tcagcgtcgg ggaatttcgc aatgcagcag 901 gcagttttct caaatttggc tagaaagtga cccactaggc agtctgaggc agttatccag 961 gatgtaagga tgtgtgcagt actctctgtg tcgaatggcg atggcctgac ctgcggattt 1021 tgaaagattg aaataggaag ccaggtatac atacacagca acgaatgcag cgtgttctat 1081 attcttaatt cgtaagccaa acctatgttt aagacgtagt ttatataacc gtacatatgt 1141 atgtagcgaa acacgttttc aaacgtcgca tcgaagccat ttcttctgca gccattgcaa 1201 tttcatcgtg ttgcgtaatc gcaaattgta aatgtgtccc tactacttca catttgtgtg 1261 tatccaagtc gaaagttctc gaactattct cgtgagcaac ccccggatcg aaaggccacc 1321 aactggctcg ttctctctct ccagaaacag cttactctta cgtttacaat tgactctcta 1381 cctatcgggt atacacattt ttatatatgt atacactcag agacacccca atcccccacc 1441 atacatatgg cgagatgtgt gaatgtatcg cagttggacg aaaacggcag ctgcgcagaa 1501 aacgctgcgg cgtacataca aacgagctct ttgtttgcct ttccccagtt ttgcttcccc 1561 atacgtataa ctgggtgttt atcagcggta atctcgccag cctgactttg tccctgtcgc 1621 ttctattgac attctaaact agattgtaga cgttttaaca tttacctagc tgttaatctt 1681 atttgtaaac atctctatat gcaacctgcc ataccactta accaagcaat atgtatttct 1741 ttctctaaac tttatagttg ggcgttgaaa gttgatatcg atatcgatcc gtgaaaagtc 1801 gataccctgc gcaagcatgg ggcggcatat gggtgctgaa aacgcactcg gcccgatccc 1861 gattgcagcg ttattcgaaa gctgtgtctg cgaccgtgac tgagatcata tgcgtacata 1921 tatctaatgt ccggggtcgt gggccagcca gggtgctcga ttctgtcaga ttgattgtgc 1981 ggattgtgtt ataggaacac tggtgtatcg acttctctgc tccactatgg gtgaaggata 2041 ccctaccgaa aaggccttct gtcgcttact atcatcgaac aagttccgta aagggcagac 2101 atacgtacac gtggcagcat attacgttca atgacacatc gtctctggat tagtagttga 2161 accaacgagc tcgaatatac cctgccagtt ggttgtaaat attaattttg ttcttatatt 2221 cagttgtaaa gtcaatacgg aagacatttc cacaccaacc atgtgtcact tatgttctta 2281 aataccagaa actgtttaaa tttttgttct tatacacttc accaattaag aattacctgt 2341 actgatgtaa gtgtacctgt tgaatcacaa caaaaataga aaaaatgaat aacaaaagag 2401 ctctataaca gaaaagccac agaaaaagtg aataaaaaat tcaaaaattc aaaaaataaa 2461 tttcgaaaca tttgctcgtg atatttttat ttcaagaaaa gatccgattt cagttatacc 2521 atctagctta aatttagcgt tacgagaata gtccctcgga ggaaaggccc tttatcaaga 2581 tgccaatatc gttcgtccta tacacaaatt actcacgtta tgaaaccaag tcgaaaaatc 2641 ggacaaagtg tctctacaat tgaggaaagg tctattgatc tcctgtgagc gcaaaaagtt 2701 tgtattcgaa cgagaatttt aaggtttaaa atcagctgaa aagtacgtat attccgcatt 2761 tatttttctc cacattttta ggatcagaac atcagaacta tatttttttg gaaaaatcaa 2821 cggatattat tttgtttgga ggtcccaaat tctatacacc ttcacacata tttttgcata 2881 caaaaaaacc taaaaataat attattgcat ggcaaaaaaa accatttata acatgaaaat 2941 tactcgaagt acttcaattt aattaccgaa ccaaaatata tacacgtacg actcgtgttg 3001 gacgagatta cattaagaga acttgaaaat aataaaaaag ttgaattgaa actgtaagta 3061 taatatattc gtaataagga atttataaag ataaataacc acaacaaaat gaaccacaat 3121 aataatgaaa ccatgaacaa taggtatgat ttatgtcgat tagcctcttg gtaaaataaa 3181 cttaaaatcc atataggtgt gtgttataaa actgccccaa ttcaaaattg cgtctcgtaa 3241 taaaccaaaa gtacatcgta caactgcaac atgacccgca attatttgaa ctctttaaca 3301 ataggtttca tttactccga ttaccccaat cacaatcctt cgaa // LOCUS DMU21123 3414 bp DNA INV 05-JAN-1996 DEFINITION Drosophila melanogaster ena polypeptide gene, complete cds. ACCESSION U21123 NID g758428 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3414) AUTHORS Gertler,F.B., Comer,A.R., Juang,J.L., Ahern,S.M., Clark,M.J., Liebl,E.C. and Hoffmann,F.M. TITLE enabled, a dosage-sensitive suppressor of mutations in the Drosophila Abl tyrosine kinase, encodes an Abl substrate with SH3 domain-binding properties JOURNAL Genes Dev. 9 (5), 521-533 (1995) MEDLINE 95212903 REFERENCE 2 (bases 1 to 3414) AUTHORS Hoffmann,F.M. TITLE Direct Submission JOURNAL Submitted (15-FEB-1995) Michael F. Hoffmann, Oncology/McArdle Lab for Cancer Research, University of Wisconsin-Madison, 1400 University Avenue, Madison, WI 53706, USA COMMENT On Apr 5, 1995 this sequence version replaced gi:755820. FEATURES Location/Qualifiers source 1..3414 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone="ena cDNA7" /clone_lib="pNB40-Brown and Kafatos, J. Mol. Biol. 1988, 203:425-437" /dev_stage="12-24 hr" CDS 408..2462 /codon_start=1 /product="ena polypeptide" /db_xref="PID:g755821" /translation="MTEQSIIGARASVMVYDDNQKKWVPSGSSSGLSKVQIYHHQQNN TFRVVGRKLQDHEVVINCSILKGLKYNQATATFHQWRDSKFVYGLNFSSQNDAENFAR AMMHALEVLSGRVANNPGGPPTNGNGYEEDMGYRTMTSEDAAILRQNNSIGGHVTPSA QTPTSQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHYGPTGN GPTSNGLPQQVNSQIPPAPQQQPQQQQFQQQQQQQQYQQMVQAGYAPSQQYQQPHYVL SNSNPNLTVHQYPTQQAQQQPPQAPQPPLQNGGMYMVGHSHLPSSASANSVVYASQQQ MLPQAHPQAPQAPTMPGPGYGGPPVPPPQQQAENPYGQVPMPPPMNPSQQQQPGQVPL NRMSSQGGPGGPPAPAPPPPPPSFGGAAGGGPPPPAPPQMFNGAPPPPAMGGGPPPAP PAPPAMGGGPPPAPGGPGAPPPPPPPPGLGGAPKKEDPQADLMGSLASQLQQFKLKKN KVTTSAPENSGSSTSSGGSGNYGTIGRSSNGMASMMDEMAKTLARRRAQAEKKDPDPE AEVKKRPWEKSNTLPHKLSGGAGSGSAGSGHEGANGNSGGAGSNTTNSGGESPRPMRK RFGSASEETILKVNGDGLSLALSNGDLDTLKAEIVREMRLEIQKVKNEIIDAIKSEFN RR" BASE COUNT 1009 a 954 c 830 g 621 t ORIGIN 1 ccccccacac tgtcgcgaaa aacgaatcga aacggaacgc aaagcggaca cggactgttt 61 tttccgggaa aaacgccgcc tttcctttga tttgtttggt gctgtcgcgg aaatgacacc 121 gccaaacgcc agcgattagt tagacgtgaa aattgcaatc aatcgctctc tttctcgctc 181 cctctctctt tgtgggaagc tgaagaagaa gcagcagcag cgaagcagac gccgcacacc 241 aatacaaacg cattttcgct gtggaaacgg aatcaaccaa aatgttgtga tctcataccc 301 ttgaaaagcc caaacactgg aagcgaattt tcctccacag cagagaaccg aagagaaacg 361 tgaaagctga aggcagcagc taggaaaaca acggaaacca aattgcaatg actgagcaga 421 gtattatcgg ggcgcgggcc tctgtgatgg tgtacgatga caaccagaag aagtgggtgc 481 catcgggcag ctcgtcggga ttgagcaagg tgcagatcta ccaccaccag cagaacaaca 541 cgttccgtgt ggtgggacga aagctgcagg atcacgaggt ggtcatcaac tgctccattc 601 tgaagggact gaagtacaat caggccacgg caacatttca tcagtggcgc gattcgaaat 661 tcgtttacgg cttgaacttc tcgagccaaa atgatgcgga gaactttgct agggccatga 721 tgcatgccct ggaagtgctc agtggtcgcg tggcgaacaa cccaggtgga ccgcccacaa 781 atggcaatgg ctatgaggag gacatgggct atcgcacgat gaccagcgag gatgcagcca 841 tactgcgtca gaacaacagc ataggtgggc acgtcacgcc ctcggcccag acgcccacct 901 cgcagaccaa ccagaataac atcccccaga gcccgccgac gccccagggt catcatcgca 961 ccagcagcgc cccaccggca ccacagcctc aacagcagca gcagcagcag caggcgcagc 1021 aaatgggtca gccaggatcc cactatggac ccactggaaa tggacccact tcgaatggcc 1081 tgccacagca ggtcaactca cagattccgc cggcaccgca gcagcagcca caacagcaac 1141 agtttcagca gcagcagcag caacagcaat atcagcaaat ggtccaggcg ggctatgcgc 1201 cctctcagca gtatcagcaa ccccactacg tgctctccaa ttctaatccc aatctaactg 1261 tgcaccaata cccgacacag caggcgcagc agcagccacc gcaagcgcca cagccgccgc 1321 tccagaacgg tggaatgtac atggtgggtc atagtcatct accgagctcc gcgagcgcca 1381 acagtgttgt gtacgccagc cagcagcaga tgctcccgca ggcgcatcca caggcacctc 1441 aggcgccgac gatgccaggt ccgggctacg gtggtccacc agtacctccg ccccagcagc 1501 aggcagagaa tccgtacggt caggtaccca tgccgccgcc aatgaatccg tcacagcaac 1561 agcagccagg tcaggtgcct ctaaaccgga tgagcagcca gggtggtcca ggtggcccac 1621 cggctcctgc tccgcccccg ccaccaccca gttttggtgg agctgctgga ggaggaccac 1681 caccaccagc cccgccacag atgttcaacg gcgcaccgcc gccgccagcc atgggcggtg 1741 gaccaccgcc ggctccaccg gcaccgccag caatgggtgg cggaccaccg ccagcaccgg 1801 gcggaccagg ggcaccacca ccaccgcctc cgccgccggg attgggagga gcgcctaaga 1861 aggaagatcc ccaggcagat ctcatgggct cgctggcctc ccagctgcag cagttcaagc 1921 tcaaaaagaa taaggtcacc acctctgctc cggagaatag cggcagcagc acgtccagtg 1981 gcggcagcgg caactatgga accataggac gaagctctaa tggcatggcc tccatgatgg 2041 acgagatggc caagacgctg gcacgacgac gcgcccaagc agaaaagaag gatcccgatc 2101 ctgaagccga agtgaaaaaa cgcccctggg aaaagtccaa tacactgccc cataagctaa 2161 gcggcggagc tggcagcgga tctgctggaa gtggccatga aggagcgaat ggtaactcgg 2221 gcggtgctgg tagcaacaca acgaacagtg gcggcgagtc cccgcgaccc atgcgcaaac 2281 gattcggtag tgccagcgaa gagaccattc tcaaggtcaa tggcgatggc ctgtcgctgg 2341 cgctttccaa tggcgacttg gacacactga aggctgagat tgtgcgcgaa atgcgattgg 2401 agattcagaa agtcaaaaat gagataatag atgctatcaa atcggagttt aatcgcagat 2461 agatcaaaat gctgtcacga taaacgcgaa tgtgtaccag gctctatcca actcacacca 2521 ctgctgtcgt ccgtaatggg acgaagatca ggatcagaat catgagactg gagaggacaa 2581 ggagccgggc gtgtaattta aggcattcgc gacatattcg atgatcgaag ctcgcaacat 2641 tgccagaatg ttgacgatcg atcgacgagg tgatggcatg tgcataggca taaatacgca 2701 tatttatgat gcatttgctc taggttaaca caaacatcta ggctaacaaa aaaaaaaaca 2761 aacacacaca cacacacaca caaagatgca gacgatgagg agaaatttag tcaaagtaat 2821 tatattttaa tgggaagaac tgcttaccga catctataag ttatgtaact aactctgttg 2881 tacattattt tgcataagtc tataagccaa ttttagtgtg agaacaagag aattgcttgc 2941 aatcttcggt atatcgtaat catccccccc ttttttcgtt tgttctccat actaccccac 3001 ctctaccttt tagtttgtta tgctcgccgg gatttatcta ttgtttcgta ccaaaaaaca 3061 acaaaatcaa aatgaacaac gtttgtaatt atacatagaa cgtatctctc tatacacagc 3121 cacaaaaaca tgcatatata tatatatata tggtttaata tatatggact actcattaaa 3181 ctaacctaaa gggaactagt attacgactc aaaaacgaaa tgaaaacaat tccacaaacg 3241 tcatccatca aagctcctga aaaaatggaa aaactccacg catttcctac aacaaaacca 3301 caacattttc ctaagcacac gatctcatac gactcaattt aagaaccagc aagtcttcag 3361 caaatcagaa acataaacaa acaaacaaaa aaaaaaaacg aatgctgcgg ccgc // LOCUS DMU23420 6126 bp DNA INV 10-JUL-1996 DEFINITION Drosophila melanogaster transposon BEL unknown protein gene, complete cds. ACCESSION U23420 NID g733531 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 6126) AUTHORS Davis,P.S. and Judd,B.H. TITLE Nucleotide sequence of the transposable element, BEL, of Drosophila melanogaster JOURNAL Drosoph. Inf. Serv. 76, 134-136 (1995) REFERENCE 2 (bases 1 to 6126) AUTHORS Davis,P.S. TITLE Direct Submission JOURNAL Submitted (24-MAR-1995) Patricia S. Davis, Laboratory of Genetics, NIEHS, P.O. Box 12233, Research Triangle Park, NC 27709, USA FEATURES Location/Qualifiers source 1..6126 /organism="Drosophila melanogaster" /transposon="BEL" /strain="white-zeste mottled" /db_xref="taxon:7227" LTR 1..361 /gene="3S18" /db_xref="FlyBase:FBgn0005384" gene 1..6126 /note="3S18 element" /gene="3S18" /allele="" /db_xref="FlyBase:FBgn0005384" CDS 919..5742 /gene="3S18" /codon_start=1 /db_xref="FlyBase:FBgn0005384" /product="unknown" /db_xref="PID:g733532" /translation="MFIGSIASNSSLTDCQRFHYLKSYLAGDALALVKHIPVTNDNYR EAWERLEQRYNKQSLIIRSFLNSFMSLPSAINSNIGTVRKIADGADEVIRGLRALNCE ERDPWLIFILLSKLDSDTRQAWAQCAESEEKGVTINRFLKFLTSRCDTLEAFELTRST QARRAATTHHADTHPRREEPKCTSCQQNHQLFKCPQFIALDIASRRDFLKSRKLCFNC LSPAHMVGNCTSRHTCRICRRKHHTLVHGSSQPIQNGNNIDTASVDSRDRPAVSHAGS TIGHNQPLAREGHRLGSETPAENNFTHHTLENIPAAGSQTLLPTILADVIDAWGNTTT CRLLLDTGSTITLASESFVQRIGVRRTHARISILGLAANSAGVTRGRAHIKLRSRHSG QTVELVSFILTSLTSSLPAQVIDTSSSTWRQICELPLADPTFCTPGAIDVIVGSDQLW SLYTGDRKHFGNDFPIALNTVFGWILAGSYSAFDDHPTSAVTHHADLDTMVRSFMEMD SIQPNQALLDASDPTERHFAATHKRSTDGVYVVEYPFKEKAPPIDSTLPQAINRFFSL ERKFRRYPELKQQYEAFLDDYLQRGHMEKLTSAQVEESPDTCFYLPHHAVIKLDSLTT KCRVVFDGSGKDSSGVSLNDRLHIGPPIQRDLFGVCLRFRQHQYVLCADVEKMFRGIK VFKPHTNFQRIVWRTTENEPLLHFRLLTVTYGLAPSPFLAVRVLKQLADDHGHEYPAA AHALLHDAYVDDIPTGANTFEELMILKDELIALLDKGKFKLRKWSSNSWRLLKSLPEE DRCFEPIQLLNKSAADSPVKVLGIQWNPGKDVLYLNLKGCDATISPTKRELLSQLSRI YDPLGLVAPVTVLLKLIFQESWTSVLQWDDPIPESLRTRWRALVEDLPALTQCQVPRY IASPFRDVQLHGFADASSHAYGAVVYARVAVGCSFQVTLVAAKTRVAPIKPVSIPRLE LNAALLLSRLLSIVKTSLTIPLFSTSCWTDSEIVLHWLSAPPRRWNTYVCNRTSEILS DFPRSCWNHVRTEDNPADCASRGLHPSKLLEHRLWWKGPSWLATPTSEWPPSTSKFSV SSSFDVNTEERAIKPTTLHNFPDESIHELLIHKFSTWTRLIRVSSYCHRFIHTLRSHH RNSAPFLTSEELLDAQRRLIRHVQQKSFAREYEQLENRRQLNAKSHLIRFSPFLDDYG VMRVGGRIEQSTLNYNAKHPILIPKDTPLAGLLVRHFHVSYLHTGVDATFTNLRQQYW ILGARNLVRKAVFQCKSCFLQRKGTSNQIMGELPIPRVQASRCFQHTGLDYAGPIAIK ESKGRTPRIGKAWFSIFVCLTTKALHIEVVSELTTQAFIAAFQRFIARRAKPTDLYSD NGTTFHGGKKTLDDMRRLAIQQAKDEELAGFFANEGISWHFIPPSAPHFGGMWEAGVR SIKLHMKRILGSKALTFEELSTVLTQIEAILNSRPLCPTGDNSLDPLTPAHFLTGSPY TALPEPCRLDMQVNRLERWNQLQAMVQGFWKRWHMEYLTSLHERTKWHLETENLKIDT LVVLKEPNLPPSKWILGRITAVHAGIDNKVRVVTVKTAHGLYKRPIAKIAVLPLC" LTR 5766..6126 /gene="3S18" /db_xref="FlyBase:FBgn0005384" BASE COUNT 1623 a 1556 c 1346 g 1601 t ORIGIN 1 tgtttgggaa cgagacaccc tgtatacgcg aacaagtcac cctttatctt tatttacatt 61 cttatttgtc tgcagcttca tcggagctta tcagcggaat caatgtaagc atcgcaccgc 121 tgtaattgtc cgcgagcttg cccagtactt ttccaaactt ctaactccct tctaactgta 181 acttgtttac gtcttatgct agactaatcg tatggcgtga ttacagccaa agctgaagtc 241 agtcacaatt ttgatctgcg agaaaacgta cgcatcggtg tcgaaataat taatattaag 301 tgtctgaact taaccaataa atgaaaatta acagtaacac tggcggtttt atttataaac 361 ataaaaattg gtccttcgag ccggataacc ggaagtgcgt ttcgttcggg catttgattt 421 tgattattgg ccttttggca aacgataatc tatagattcc tacatcgtgt agaatcgttc 481 ccttctttcg accaccatgc ggagtgtgat tcaacaacgg ggcttctgca aaagccaaat 541 tactcgtgcg cataataatg ccttaaaatt tgttgatgac attcactcag tgcaaacaat 601 agttgtccgc ctggcgcaac tacaggaaaa ttatttgcgg ttcgtacggc tctcggaaga 661 gctgtatgca tttcaatcgg aagccgattg ggagaaccct gacgaggatt ttgacgcata 721 tgaggacaaa cattatgcta cacacgctat tctcagcaat actttggagg agttgagacg 781 ggatgtcacc tcaaacagta ttgatgccac agttcaagcg caggcacacc ccagagaagt 841 catgtcgatt ttcagttcga gagaattaaa cttccgactt tttctggaaa ttatgaggac 901 tggaaacatt tttcggacat gtttattgga tcgattgctt ccaattcgag cctgacggat 961 tgccaacgat ttcattattt aaaatcgtac cttgccggag acgcgcttgc attagttaaa 1021 catattccag ttactaatga caactatcgg gaagcatggg agcggctgga acagcgatat 1081 aacaaacaat cgctaattat tcgatcgttc ttaaacagtt tcatgagcct tccgagtgct 1141 ataaattcaa atatcggcac agtgcggaaa attgccgatg gtgcagacga agttattcgt 1201 ggtctacgag ctcttaattg cgaagagagg gatccctggc taattttcat tctactttca 1261 aaattagata gcgatacccg ccaagcctgg gctcagtgcg cagaatccga ggaaaaaggt 1321 gtgaccatca accgattctt gaaatttctc acatcacgct gcgatacgtt ggaggctttt 1381 gaattaactc gatcaaccca agctcgacgc gcagctacca cgcaccacgc agacacgcat 1441 ccaagacggg aagagccgaa gtgcacatcg tgccagcaga atcaccaact gtttaagtgt 1501 cctcaattca tcgcactcga cattgcatct cgccgagact tcctcaaatc aagaaagctc 1561 tgtttcaatt gcctcagccc ggctcatatg gtgggcaact gtacatcgag gcatacttgt 1621 cggatctgcc gccgcaagca tcatactttg gttcatggct cgtcgcagcc aattcaaaat 1681 ggcaacaaca ttgacacagc aagtgttgac agccgcgatc gaccagcagt ctcacatgcg 1741 ggatctacaa ttggccacaa tcaaccgcta gctcgagaag gtcatcgctt gggaagcgag 1801 actcccgcgg aaaacaactt tacgcatcat actctggaga atattccggc ggctggttct 1861 cagactctgt tgccaaccat ccttgctgac gtcatcgacg cctggggaaa cactacaacc 1921 tgcaggctgc tcctggacac tggatctaca ataaccttgg catcggaatc atttgttcag 1981 cgaataggcg tgcgtcgaac gcacgcacgg atttctattc tcggtctcgc cgccaacagc 2041 gcgggcgtta cccgaggacg cgcacatatc aagctgcgct ctcgtcattc gggccaaact 2101 gtcgaattgg tctcgttcat tctcacctcg ctgacgtcat cacttcctgc ccaagttatt 2161 gacacctcat cctctacgtg gaggcaaatc tgcgagcttc ctttggcaga cccaacgttc 2221 tgcacacctg gagcaatcga tgtcattgtt ggatcggatc aactttggtc tctatacaca 2281 ggagatcgga aacactttgg taacgacttt cctatcgctc tcaatactgt atttggttgg 2341 attcttgcag gctcttactc tgcattcgat gatcacccta cttctgcggt tactcatcac 2401 gcggacctag acacgatggt tcgttcattc atggagatgg acagcattca gcctaaccag 2461 gctctcctgg acgccagcga tcccacagag cgtcattttg ctgccacaca caagcgctcg 2521 acggacgggg tgtacgtcgt cgagtatccc ttcaaggaaa aggcaccgcc tattgattcg 2581 accttgccac aggccatcaa tcgcttcttc tcgctggaac gcaaatttcg tcggtatcca 2641 gaattgaagc agcagtacga agctttcctg gacgactact tgcaacgtgg acatatggaa 2701 aaactgacct cggctcaggt tgaagagtcc ccagacacct gcttctattt gccgcaccac 2761 gctgtcatca aactggacag tctgactacc aaatgtcgtg tagtttttga tggatcagga 2821 aaagacagct ctggagtatc gctcaatgac agactacata ttggtccacc gattcaacgc 2881 gatctttttg gcgtttgtct acgcttccgg cagcaccaat atgttttatg tgcagatgtc 2941 gaaaagatgt ttcgaggcat taaagtcttt aagccacaca ccaattttca gcgcattgtt 3001 tggcgcacga ctgagaatga acctctgctt cattttcgcc tgctgacggt tacctacgga 3061 ttggcaccgt caccatttct ggctgttcga gttctaaagc aacttgccga cgatcatggc 3121 catgaatacc ctgcagcagc tcacgctctt ctgcacgatg cctatgtgga cgatatcccg 3181 acaggcgcca acacattcga ggagcttatg attctcaagg acgagcttat agccctcttg 3241 gataagggaa aattcaagct acgcaaatgg agttctaata gttggcgtct tctgaaatca 3301 ttaccagagg aagatagatg ttttgaacct atccagctcc tcaacaaatc agctgcggat 3361 tcacctgtca aagttcttgg tatccaatgg aaccctggga aggacgtcct gtatctcaac 3421 ctaaagggat gcgatgcgac catttctccg acgaaaagag aactcttgtc tcagctatca 3481 agaatttatg atccgcttgg actggtagcg ccggtcacag ttctactcaa gctaatcttc 3541 caagaaagct ggacaagtgt cctgcagtgg gacgacccca tacctgaaag tctacgtacg 3601 cgctggagag ccttagtaga ggatttgcca gcacttacgc aatgccaagt accacggtat 3661 attgcgtcac catttcgaga tgttcaacta cacggattcg ccgacgcatc ctcgcacgcc 3721 tacggtgcgg tagtttacgc tcgagttgca gttggatgca gctttcaagt aactctggtt 3781 gccgccaaaa cacgggtggc cccgatcaag cccgtatcaa ttccacgttt ggagctaaac 3841 gctgcgttac ttctatctcg attgctttct attgtcaaaa catcactaac aattcctctt 3901 ttcagcacga gctgctggac agattcagaa attgtgctac actggctttc agctccccct 3961 cgacggtgga acacctacgt ctgcaaccga acttctgaga tattgagcga ctttccccgt 4021 agctgctgga accatgttcg cacggaagac aatcctgcag attgtgcttc ccgaggactt 4081 catccgtcaa agcttctgga gcatcgactg tggtggaaag gtccgtcttg gctggccaca 4141 cccacctctg agtggccacc ttctacaagc aagttcagcg tatcttcaag tttcgatgtc 4201 aacaccgaag aacgagccat aaagcccacg actctacata actttcctga tgaaagtata 4261 cacgagttac tcatccacaa attctcaacc tggacgcgtc ttataagggt atctagctac 4321 tgtcatcgct ttattcacac tcttcgatcc catcatagga attcggcacc attccttacg 4381 tctgaagagt tgctggacgc acagcgccga cttattcgac atgtgcaaca aaaatccttt 4441 gccagagaat atgagcagct agagaatcga cgccagctta acgctaaatc gcatcttatc 4501 cggttttctc cgtttctgga tgattatgga gtaatgcgag tcggtgggag aatcgagcaa 4561 tctacactca actataacgc caagcacccg attctgatac ctaaagatac accactagct 4621 ggactcctgg ttcgacattt tcatgtctcc tatctgcaca ctggagttga tgcaacgttc 4681 accaatcttc gtcagcagta ctggattctg ggagcccgca atctcgtcag aaaggcagtc 4741 ttccaatgca aatcctgttt tcttcaacga aagggcacaa gcaaccagat catgggagag 4801 ctaccaattc ctcgagttca agctagccgc tgctttcaac acacagggct ggactacgct 4861 ggaccgatcg caatcaagga atcaaaggga agaactccac gcatcggaaa ggcatggttt 4921 tctattttcg tgtgtctcac tacaaaggca cttcacatcg aggttgttag tgagctaact 4981 acacaggctt tcatcgcagc ctttcaacga ttcattgccc gccgagcgaa gcctactgac 5041 ctgtattcgg ataatggaac aacatttcat ggaggcaaga aaactttgga tgacatgaga 5101 cgtctggcca ttcaacaagc caaagatgag gaactagcag gattctttgc caatgaaggg 5161 atttcttggc actttatacc cccgtctgct ccacattttg gagggatgtg ggaagctgga 5221 gttcgctcaa ttaaactcca tatgaaacga atacttggat caaaggcttt aacgtttgag 5281 gagctctcta ctgtcctgac ccaaattgaa gctatcctga attcacgccc gctgtgccca 5341 actggggata attctttgga tccactgacg cctgctcatt ttttgactgg atctccgtat 5401 actgcattgc ctgaaccctg tcgtctggat atgcaagtca atcgattgga gaggtggaat 5461 cagctgcaag ccatggttca aggcttttgg aaaaggtggc atatggaata cctgacatct 5521 cttcatgagc ggacaaagtg gcatctggaa accgagaatc tgaagatcga cacactggta 5581 gtactcaagg agcccaatct accgccctct aaatggattc ttggccgcat cacagcagtg 5641 cacgcaggaa tcgacaacaa ggtccgagtc gttacagtga agactgctca cggattatac 5701 aaacgcccaa ttgccaaaat cgctgtactg cctctctgct gaacaaccgt tcaggggggc 5761 cggtatgttt gggaacgaga caccctgtat acgcgaacaa gtcacccttt atctttattt 5821 acattcttat ttgtctgcag cttcatcgga gcttatcagc ggaatcaatg taagcatcgc 5881 accgctgtaa ttgtccgcga gcttgcccag tacttttcca aacttctaac tcccttctaa 5941 ctgtaacttg tttacgtctt atgctagact aatcgtatgg cgtgattaca gccaaagctg 6001 aagtcagtca caattttgat ctgcgagaaa acgtacgcat cggtgtcgaa ataattaata 6061 ttaagtgtct gaacttaacc aataaatgaa aattaacagt aacactggcg gttttattta 6121 taaaca // LOCUS DMU26939 2983 bp DNA INV 12-JUN-1995 DEFINITION Drosophila melanogaster arginine kinase (Argk) gene, complete cds. ACCESSION U26939 NID g857562 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2983) AUTHORS Hecht,L.B., Scott.,L.M. and Collier,G.E. JOURNAL Unpublished REFERENCE 2 (bases 1 to 2983) AUTHORS Hecht,L.B., Scott.,L.M. and Collier,G.E. TITLE Direct Submission JOURNAL Submitted (11-MAY-1995) Leslie B. Hecht, Biological Sciences, Illinois State University, MC4120, Normal, IL 61970-4120, USA FEATURES Location/Qualifiers source 1..2983 /organism="Drosophila melanogaster" /note="From construct Cos1 by John W. Tankun" /db_xref="taxon:7227" /map="66F of 3L" /chromosome="3" gene 1428..2492 /note="Arginine kinase" /gene="Argk" /allele="" /db_xref="FlyBase:FBgn0000116" CDS 1428..2492 /gene="Argk" /codon_start=1 /product="arginine kinase" /db_xref="PID:g857563" /translation="MVDAAVLAKLEEGYAKLAASDSKSLLKKYLTKEVFDNLKNKGHA HLQVDPADVIQSGLENHDSASAIYAPDAEAYTVFADLFDPFIEDYHGGFKKTDKHPAS NFGDVSTFGNVDPTNEYVISTRVRCGRSMQGYPFNPCLTEAQYKEMESKVSSTLSGLE GELKGKFYPLTGMEKAVQQQLIDDHFLFKEGDRFLQAANACRFWPSGRGIYHNDAKTF LVWCNEEDHLRIISMQQGGDLGQIYKRLVTAVNEIEKRVPFSHDDRLGFLTFCPTNLG TTILASVHIKVPKLPSNKAKLEEVAAKYNLQVANPREHTEAEGGSYDISNKRRMGLTE FEAVKEMYDGITELIKLEKS" BASE COUNT 819 a 756 c 750 g 658 t ORIGIN 1 ctgcagacag aagcagagag agagctcaga gtagtcagtc agccgagcag cagtcagcaa 61 gtcctttgct ccccaaaata gcatcgtgag tgtttgtttt agtgtagtat acatttgggc 121 gcggcaagag aaagcagagt cgcaagagtc tctcgaaagg ataacgcata aaggatatag 181 aatatacaac attgttgcgt ccgatatttg ataccaacga aaaagaccac caatcaaaca 241 gatatatacg ctgaaacgag aatcaatcaa tcaatcccaa tcaccgaaaa tcaaaagcaa 301 tagcgttaag ccaagcgtgc gtctgtgtct gagaaaagag tgtgtgtgtg tctaaaataa 361 ggatcccaaa acgagatcct tgaagactaa agctgcattg tgatttcatt ttacctgcaa 421 acgcaaccaa acatacgaag attggttttt tctatatacc aaaataccga ctttgtgacc 481 aagcaaacgc caaattttta aacgtttttt gaaaatcttt acatcaaacc ctacaaaaaa 541 aaaacaccac acgcgaaatg gtctctgcgc ctccaaggac aaaaaggaga agtgatcgag 601 gcgaggtgca atggcgaacc caatggtacc gcacggacag ctggcgctgg aggagatggg 661 tgtgtatccc ggagttccgg gctcttatat tcaatttttt ttgtagtggg cctacgactc 721 ctagacagga gttgtctgta tatccctggt tgggtgaccg accgaccgaa gggctgacgt 781 catgtgtgtg tgtgtgtaag ttgcatgaac gctgctctgt cgaaaaagcg gccaaaaata 841 aagtgccata aaaaaattat tattgccctg gtccttcgtt ttgtccagga cttcgctggt 901 agccatgttg ttgtagtcgc atgtccttcg acaaggagga aggcagaggg cggtggtggt 961 gtatagtgtg ccgtcgattt gcgtattcag cggcagcggc aaaatttata gtcagtcagc 1021 caccaccgaa gcaggcacat cgagaaacaa aaccagagtc accaccacta aaaagggcgt 1081 tgtgggatca agggtgatgg gtgttcggtt ctgggtactg ctttctgggt gtagcgagct 1141 gaaggggaaa gggagcgtgg gtatatgtgg cagtcgcgtg ccacagaccc aagtcgagta 1201 tgagcacatg gccataaccc gaaacttaat tgcgggcaaa caggcaggaa ttgaggaaaa 1261 cagaaacaca agaaaactgt tgccgacttt tggcgccaca aaatgaagat aggcgagtcc 1321 tttgtagcaa taaaatgttg tactgtcgcc ccagccacgc ccttttacaa tggtcaatac 1381 cccattctct ccttctctct acgtattttt gcagcaaaca agacaccatg gttgatgccg 1441 ctgttctcgc taaactggag gagggttatg ccaagttggc tgcctccgac tccaagtcgc 1501 tgttgaagaa gtacctgacc aaggaggtct tcgacaacct gaagaacaag ggtcacgccc 1561 accttcaagt cgaccctgct gatgtgatcc agtctggcct ggagaaccac gattccgcgt 1621 cggcgatcta cgctcccgat gccgaggctt acacagtgtt cgccgacttg ttcgatccat 1681 tcatcgagga ctaccatggt ggcttcaaga agaccgacaa gcacccggcc tccaactttg 1741 gcgatgtgtc caccttcggc aacgttgacc ccaccaacga gtacgtgatc tccactcgcg 1801 tgcgttgcgg tcgctccatg cagggatacc ccttcaaccc ctgcttgacc gaggcccagt 1861 acaaggagat ggaaagcaag gtcagcagca ccctgtccgg tctggaaggt gagctgaagg 1921 gcaagttcta ccccctgact ggcatggaga aggccgtcca gcagcagctg atcgacgacc 1981 acttcctgtt caaggagggc gatcgtttcc tgcaggccgc aaacgcttgc cgcttctggc 2041 ccagcggccg tggcatctac cacaacgatg ccaagacctt cctggtctgg tgcaacgagg 2101 aggaccatct ccgcatcatc tccatgcagc agggcggtga tctgggccag atctacaagc 2161 gtctggtgac cgccgtcaac gaaatcgaga agcgtgtgcc cttcagccac gacgaccgtc 2221 tcggtttcct gaccttctgc cccaccaacc tgggcaccac catcctggcc tccgtgcaca 2281 tcaaggtgcc caagctgccc tccaacaagg ccaagctgga ggaggttgcc gccaagtaca 2341 acctgcaggt cgcgaacccg cgtgagcaca ccgaggctga gggcggtagc tacgacatct 2401 ccaacaagcg tcgcatgggt ctgaccgagt tcgaggccgt caaggagatg tacgatggca 2461 tcaccgagct gatcaagctc gagaagagct aaattgccgc aacgccgagc atcgtccccc 2521 cggctggagg tgcatcgctc cggagttaac atctatccag ggtgccacca gttcggggca 2581 tacgcaacaa tcaagaacaa caacagcaac acttagaaat cttcggctcc gtcgcttgtc 2641 gcttttgggc ggttcgaact gcaaataatg tctagtttgt agctatggtg tgagctgctg 2701 tcccagtccg gaaccttcgg cattttcgta tactttgaga tcgcgggatc cgcaggcagg 2761 tgactccatc ttagcaacac catcaacacc tagcagcagc agcagcagac aacggataac 2821 tatttgacaa aaacatttgc ttaattacaa cccaacaatg taaacatttt gacatctgtg 2881 tcagagcaaa aaacaaaaaa gaggcacttt taaaatactt ttattgagtt gaaggtttat 2941 aagagttaaa ttttaaaaat aaaaaactta actcatgaat gtt // LOCUS DMU41064 1300 bp DNA INV 21-DEC-1995 DEFINITION Drosophila melanogaster putative extracellular ligand trunk gene, complete cds. ACCESSION U41064 NID g1127840 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1300) AUTHORS Casanova,J., Furriols,M., McCormick,C.A. and Struhl,G. TITLE Similarities between trunk and spatzle, putative extracellular ligands specifying body pattern in Drosophila JOURNAL Genes Dev. 9 (20), 2539-2544 (1995) MEDLINE 96033803 REFERENCE 2 (bases 1 to 1300) AUTHORS Casanova,J. TITLE Direct Submission JOURNAL Submitted (21-NOV-1995) Jordi Casanova, C.I.D. (CSIC), Jordi Girona 18-26, Barcelona, 08034, Spain FEATURES Location/Qualifiers source 1..1300 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="II" /map="2-36; 31A-C" gene 1..1300 /note="trunk" /gene="trk" /allele="" /db_xref="FlyBase:FBgn0003751" mRNA 284..1063 /gene="trk" /db_xref="FlyBase:FBgn0003751" CDS 325..1005 /gene="trk" /note="putative extracellular ligand" /codon_start=1 /db_xref="FlyBase:FBgn0003751" /product="trunk" /db_xref="PID:g1127841" /translation="MKSQSELAIVLTWLAVLGTAQDDADYCAELSTQSLAKILGQAFN PRYMSIDPPGEPEEKSYHLGYKRSSYELPFYADSDAISVSHFPAWETNHFALVEKKKE APRSKSLRTRSAFMDRVGHPRIDGFKQRPWECSSKINWIDLGLNYFPRYIRSIECIAR KCWYDHFNCKPKSFTIKVLRRKTGSCIRINDKLILITAEKFENDYTQLWIWEEIAVNF CCECVMLY" BASE COUNT 380 a 264 c 278 g 378 t ORIGIN 1 accttatgat gacaatttta ttatgacttc aaatatttag acccatcttt tatagtttaa 61 tttaaaaaaa aaaactttaa atttatccaa agtttagaat gcgttttaat tatatatatg 121 aataaattta atttataatc tttcgcaatg acactgaaat taaaatcctt ctttttattg 181 aattggctgt tattacttta gtacctaaat aagttacagt gtagagagca acgataactg 241 ctgtaaacac gataaatcaa ttggttgata ttggtgtagc cctgttttta gccagccatg 301 tttctgcgta tactgtgtcc aactatgaaa tcccaaagtg aactggccat tgtgctcact 361 tggttggcag tgctggggac ggctcaagat gatgccgatt actgcgccga gctatctacg 421 cagtcgctgg ccaaaattct gggacaggca tttaatccgc gctacatgag catcgatccg 481 ccgggcgagc ccgaggagaa gagctatcat ctgggataca agcgatcgtc gtacgagctg 541 cccttctatg cggacagtga tgcgatttcg gttagtcact ttcccgcctg ggagaccaac 601 cactttgcgc tggtagagaa gaagaaggag gcaccgagga gcaagagtct gcgcacgaga 661 agcgccttca tggatcgtgt gggacatccg agaatcgatg gattcaagca gcggccgtgg 721 gagtgctcgt cgaagatcaa ctggattgac ttaggcttaa attactttcc acgctatatc 781 cgttcgatcg agtgtattgc cagaaaatgt tggtatgatc actttaattg caagccaaaa 841 tcatttacaa taaaagtact gcgccgtaaa actggctcat gcattcgaat aaacgataaa 901 ttgattttga tcaccgcaga gaagtttgag aatgattata cgcagctctg gatttgggaa 961 gaaatagcgg ttaacttttg ctgtgaatgt gttatgctat actagtagcg ccatttaatc 1021 aagatttaat taatatacac gtttaaaatg tcaacaaaaa actttaatag cattgggaac 1081 aacagatacc ttaatgggtc ttgcatcata ctcctcgcca tcgatggagt aaaacttctc 1141 gcccatttca ccatccggat gcagttgaat agtcctgctc ttaaccacca agctgggtaa 1201 aattttgctg cacgtgactt ccggaatttg tttgataaac tcccagcccg gctgcaggga 1261 gcttataaac tgactttcca gctccgcaaa gttatccttg // LOCUS DMU41476 1428 bp DNA INV 24-DEC-1995 DEFINITION Drosophila melanogaster iota trypsin (iotaTry) gene, complete cds. ACCESSION U41476 NID g1134971 KEYWORDS . SOURCE fruit fly strain=Oregon R. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1428) AUTHORS Gao,L., Wang,S. and Hickey,D. TITLE Direct Submission JOURNAL Submitted (27-NOV-1995) Lifeng Gao, Biology, University of Ottawa, 30 Marie Curie, Ottawa, Ontario K1N 6N5, Canada FEATURES Location/Qualifiers source 1..1428 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /chromosome="2" /map="2; 47D-47F" gene 415..1173 /note="&igr;Trypsin" /gene="&igr;Try" /allele="" /db_xref="FlyBase:FBgn0015001" CDS 415..1173 /gene="Try" /codon_start=1 /product="iota trypsin" /db_xref="PID:g1134972" /translation="MAVYGIVATVLVLLLLGDASDVEATGRIIGGSDQLIRNAPWQVS IQISARHECGGVIYSKEIIITAGHCLHERSVTLMKVRVGAQNHNYGGTLVPVAAYKVH EQFDSRFLHYDIAVLRLSTPLTFGLSTRAINLASTSPSGGTTVTVTGWGHTDNGALSD SLQKAQLQIIDRGECASQKFGYGADFVGEETICAASTDADACTGDSGGPLVASSQLVG IVSWGYRCADDNYPGVYADVAILRPWIVKAANAI" BASE COUNT 359 a 342 c 371 g 356 t ORIGIN 1 gaattcttcg tagctctgag tgctataaac agccctaagt ttggcatcgt tgcgcagttc 61 atagagttct ccatcacgga tgcactgcaa gcagctctcc cgcagacgga taagctcctc 121 cgcggttatc ttccagttat ccatgtcggt attatctctc aaaagtcctt ttttcgatat 181 tcacaacatc taaataaatt tgtttggcaa tagttgtctg ggcaacgtgt tttcatatcg 241 aactagagaa ccgggtaagg agcagtgctg accaagacca atcaagggta tcagtaatat 301 atactaacga taagccatca attagccgaa gattaacttt tacagcccta gtaaaaagca 361 cgccatgaag gggtttcgtg gacaaatatg agcagtttgc acttggcttt cggaatggct 421 gtttacggaa tagtggctac ggtgctggtc cttttgctgc tcggcgatgc gtcagatgtc 481 gaggccactg gacgaattat tggcggaagc gatcagctga ttcgtaacgc cccctggcag 541 gtgtctattc agatcagtgc gcgccacgag tgcggcggag tcatctatag caaggagatc 601 atcatcacag ccggacactg tctacatgag agatccgtga cgctgatgaa ggtgcgtgtg 661 ggtgcacaga atcacaacta cggcggcaca ttggtacctg tggcggcgta caaagtccac 721 gagcagtttg attcccgctt cctgcactac gacattgccg tgcttcgtct gtccacacca 781 ctgacctttg gcctctcaac cagagccatc aatttagcca gtacgagtcc atcgggtgga 841 acaacagtca ctgtcacggg ttggggccac actgataatg gagccctctc cgatagcttg 901 cagaaggccc agctgcagat catcgatcgc ggagagtgtg cctcgcaaaa gtttggctac 961 ggtgcagatt ttgtgggcga ggaaacaatt tgcgctgcca gcactgatgc agatgcctgt 1021 acgggagact ctggaggtcc tttggtggcc agtagccagc tggtgggcat tgtatcctgg 1081 ggttaccggt gtgcggacga caactacccc ggtgtctatg ccgatgtggc gattctgcga 1141 ccttggatag tcaaggcggc caatgccata tgaacagatt ttggaaaata aagaccatgc 1201 ttaaaaaagt ttaagaatgc aactccatta atattcgccc cccaggtgga atcgaaccac 1261 ttcgacgcaa atcgactacg gatttgaagt ccgcaccccg gaccaccgaa gttcagtggg 1321 gcatttagtg tgctagagtt tccctaatta tatacacgtt gtgctgaata agcacttggg 1381 aattttaaga gtacgtgtag agcaaattcc agtagatccg gggaattc // LOCUS DMU42425 2500 bp DNA INV 13-MAR-1996 DEFINITION Drosophila melanogaster putative Toll-related transmembrane receptor DmMstProx gene, complete cds. ACCESSION U42425 NID g1223895 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2500) AUTHORS Mitcham,J.L., Parnet,P., Bonnert,T.P., Garka,K.E., Gerhart,M.J., Slack,J.L., Gayle,M.A., Dower,S.K. and Sims,J.E. TITLE T1/ST2 signaling establishes it as a member of an expanding interleukin-1 receptor family JOURNAL J. Biol. Chem. 271 (10), 5777-5783 (1996) MEDLINE 96215042 REFERENCE 2 (bases 1 to 2500) AUTHORS Sims,J.E. TITLE Direct Submission JOURNAL Submitted (06-DEC-1995) John E. Sims, Molecular Genetics, Immunex Corporation, 51 University Street, Seattle, WA 98101, USA COMMENT DmMstProx is presumably a type I transmembrane receptor protein, yet it appears to lack a suitable signal peptide cleavage site. Since the sequence was derived from genomic DNA, it is conceivable that it encodes only a partial reading frame and the first methionine codon is not the true initiation site. According to this scenario, translation would begin in a hypothetical exon upstream of the present sequence. The in-frame stop codon, 126 bp upstream of the CDS, would then be predicted to lie in an intron which would be spliced out of the final mRNA. FEATURES Location/Qualifiers source 1..2500 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2500 /gene="MstProx" /allele="" /db_xref="FlyBase:FBgn0015770" CDS 272..2407 /gene="MstProx" /note="putative Toll-related transmembrane receptor" /codon_start=1 /db_xref="FlyBase:FBgn0015770" /product="DmMstProx" /db_xref="PID:g1223896" /translation="MKVRNYIPNKNFTALICTHKNCNFIRGINGLECPKLCQCLYIID DLELNIDCSNLGLLQIPPLPIPIYGDVKLNFSNNSLSQLPTMTLPGYKLVKRLDVSRN RLTNLSINHLPAKLDYLDVSFNEIINMGNDVIKYLRTVPIFKQTGNQWTIHCDDKPLL NFFRHLKLIIRMKSAEMKPMFLHSLTELPKGFLKFLGKHFIWLGVRKQEYYLINEEQL LQSMHRKLNNLNTIMSIYKYMEWLHRKLIFVNREYDLFYIRQMAAPCPHKCECCYSRD SLILKIDCRNKFVYNFPDIVARNSRLMRKQNMSSPMELHLSKNNISNITIAMLPKELR FLDLRFNNLVTLDDKVLSYLKKNSIKTKLSGNPWNCDCKSRSVLSILRDHEPLEYDVT LKRCNISPTDCPDVCVCCLDNLTWPSFIVDCRGEGLLQMPSLSSRVTYVDLRNNNLTA LSQKNRSSIENRSLKLHLLDNPWSCSCNDIEKINFMKSVSSSIVDFTEIKCSNGEKLV SINQHIVCPSDLFYYLALAISLVATIIALNFLIWFRQPVLVWFYEHGVCLSLAAKREL DKDKRFDAFLAFTHKDEALLEEFVDRLERGRPRFQLCFYLRDWLAGESIPDCIGQSIK DSRRIIVLMTENFMNSTWGRLEFRLALHATSRDRCKRLIVVLYPNVKNFDSLDSELRT YMAFNTYLERSHPNFWNKLIYSMPHTKLR" misc_feature 1841..1900 /gene="MstProx" /note="encodes transmembrane sequence" /db_xref="FlyBase:FBgn0015770" BASE COUNT 752 a 499 c 483 g 766 t ORIGIN 1 accatttgct cagtttatta atctcaaaag gatggttctt accaattgca cggttaggaa 61 tttgacattt ttaaggtttg taaaattgat taaaattata gcttcctata cattgctctc 121 tcattaagtt gtttgcaatt cagtataaat aattaatttt ctattacaaa ctctatttag 181 aactcttcaa aagagccttg aacatttgga gctggatatc gacaacgagg tggatttaaa 241 atactttaca aacttttcca gtctcaaatt tatgaaggtt aggaactaca ttcccaacaa 301 gaacttcaca gctttaatat gcacacacaa aaattgtaat tttatccgtg gaatcaatgg 361 gttagaatgc cctaaacttt gccaatgtct ctatataatt gatgacttgg aattaaacat 421 agactgcagc aatctgggtc ttttgcaaat tccgccccta ccaattccaa tttatggcga 481 tgtgaagttg aatttttcca ataattctct ctctcagttg ccaactatga ctttacctgg 541 atataaattg gttaaaagac ttgatgtttc gcggaatagg ttaaccaact taagtatcaa 601 tcaccttcca gcgaaactgg actatcttga tgtaagcttc aacgaaataa ttaatatggg 661 gaacgatgta atcaaatact taagaactgt ccccatcttt aagcaaacag gcaatcaatg 721 gactattcat tgtgatgaca agccgttatt aaatttcttt agacatctca aattgataat 781 acggatgaaa agtgctgaaa tgaaacctat gttcttgcac tcgttaaccg aattacctaa 841 ggggtttttg aagtttttgg gaaagcactt catttggcta ggtgtgagaa aacaagaata 901 ctatttgatc aatgaggaac agttgttgca aagtatgcat cgcaaactaa acaaccttaa 961 tacaattatg agcatctata agtatatgga atggcttcac cgaaaactaa tattcgtcaa 1021 tcgggagtat gatctatttt atattcgtca aatggcagcc ccctgtcctc ataagtgcga 1081 gtgttgttat agccgcgatt cacttatttt aaaaatagac tgcaggaata aatttgtata 1141 taactttccc gatatcgttg ctagaaatag tcgtcttatg cgaaaacaaa atatgtctag 1201 tcctatggaa ctgcatttat ctaaaaataa tatatcaaac ataaccatcg caatgctacc 1261 aaaggaacta aggtttcttg atctacgttt caataatctc gttaccctgg atgacaaagt 1321 cctgagttac cttaagaaaa attcaattaa aactaaactt tctgggaatc cctggaattg 1381 cgactgtaag tcgagatcag tcctttccat tttgagagat cacgaacccc ttgagtatga 1441 cgtcacgttg aaacgttgca atatatctcc aacggattgt ccagatgttt gtgtctgctg 1501 cttggataac ttgacatggc catcatttat tgtcgattgc agaggagaag gacttctaca 1561 gatgccttca ctttcaagca gggttaccta tgtggaccta aggaataaca accttacggc 1621 cctgtcacag aagaatcgtt cttctatcga gaacagatcg ttaaagctgc atttgcttga 1681 caatccctgg tcttgttctt gcaacgatat agaaaagata aatttcatga agagtgtgtc 1741 ttcaagtata gtagacttca ctgagataaa gtgcagtaat ggtgagaagc tagtctcgat 1801 taatcagcat attgtgtgtc catctgacct cttttattat ttggcactcg cgatctccct 1861 agtggccacg atcattgcct taaacttttt gatatggttc agacaaccgg tcctggtctg 1921 gttctatgag cacggtgtgt gtctcagtct ggcagccaag cgggaacttg ataaggacaa 1981 aaggttcgat gcctttctgg cgtttaccca taaggacgag gctctgctgg aggagttcgt 2041 ggataggctg gaacgtggta ggcccaggtt ccaactctgc ttctacctgc gagactggct 2101 ggcgggcgaa tctattcccg attgcattgg tcaatctata aaggactcgc ggcgcattat 2161 tgtcctcatg acagagaact ttatgaattc cacttggggt cgcctcgagt tccgactggc 2221 cctccacgcc acctcacgcg atcggtgcaa gcgtctgata gtggtgctct atccaaacgt 2281 gaagaacttc gacagtctgg atagcgagct aaggacctac atggcattta acacctatct 2341 ggagagaagc catccgaact tttggaacaa gctgatttac tcgatgccgc ataccaagct 2401 acgttgacta ggacattaca ttattaattt caataagaaa caaaaatata taatttgttg 2461 tctcccacac agcttatttt ttgagattta catagttccc // LOCUS DMU43583 4995 bp DNA INV 30-JAN-1996 DEFINITION Drosophila melanogaster kinase suppressor of ras (ksr) gene, complete cds. ACCESSION U43583 NID g1171239 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4995) AUTHORS Therrien,M., Chang,H.C., Solomon,N.M., Karim,F.D., Wassarman,D.A. and Rubin,G.M. TITLE KSR, a novel protein kinase required for RAS signal transduction JOURNAL Cell 83 (6), 879-888 (1995) MEDLINE 96107327 REFERENCE 2 (bases 1 to 4995) AUTHORS Therrien,M. TITLE Direct Submission JOURNAL Submitted (19-DEC-1995) Marc Therrien, Molecular and Cell Biology, University of California, Berkeley, Life Sciences Annex, Box 539, Berkeley, CA 94720-3200, USA FEATURES Location/Qualifiers source 1..4995 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="III" /map="3; 83 A3-5" gene 787..3687 /note="kinase suppressor of ras" /gene="ksr" /allele="" /db_xref="FlyBase:FBgn0015402" CDS 787..3687 /gene="ksr" /standard_name="kinase suppressor of ras" /note="protein kinase related to Raf protein kinases; protein kinase" /codon_start=1 /product="KSR" /db_xref="PID:g1171240" /translation="MSSNNNAPASAPDTGSTNANDPISGSLSVDSNLVIIQDMIDLSA NHLEGLRTQCAISSTLTQQEIRCLESKLVRYFSELLLAKMRLNERIPANGLVPHTTGN ELRQWLRVVGLSQGTLTACLARLTTLEQSLRLSDEEIRQLLADSPSQREEEELRRLTR AMQNLRKCMESLESGTAASNNDPEQWHWDSWDRPTHIHRGSVGNIGLGNNSTASPRTH HRQHGVKGKNSALANSTNFKSGRQSPSATEELNSTQGSQLTLTLTPSPPNSPFTPSSG LSSSLNGTPQRSRGTPPPARKHQTLLSQSHVQVDGEQLARNRLPTDPSPDSHSSTSSD IFVDPNTNASSGGSSSNVLMVPCSPGVGHVGMGHAIKHRFTKALGFMATCTLCQKQVF HRWMKCTDCKYICHKSCAPHVPPSCGLPREYVDEFRHIKEQGGYASLPHVHGAAKGSP LVKKSTLGKPLHQQHGDSSSPSSSCTSSTPSSPALFQQRERELDQAGSSSSANLLPTP SLGKHQPSQFNFPNVTVTSSGGSGGVSLISNEPVPEQFPTAPATANGGLDSLVSSSNG HMSSLIGSQTSNASTAATLTGSLVNSTTTTSTCSFFPRKLSTAGVDKRTPFTSEYTDT HKSNDSDKTVSLSGSASTDSDRTPVRVDSTEDGDSGQWRQNSISLKEWDIPYGDLLLL ERIGQGRFGTVHRALWHGDVAVKLLNEDYLQDEHMLETFRSEVANFKNTRHENLVLFM GACMNPPYLAIVTSLCKGNTLYTYIHQRREKFAMNRTLLIAQQIAQGMGYLHAREIIH KDLRTKNIFIENGKVIITDFGLFSSTKLLYCDMGLGVPHNWLCYLAPELIRALQPEKP RGECLEFTPYSDVYSFGTVWYELICGEFTFKDQPAESIIWQVGRGMKQSLANLQSGRD VKDLLMLCWTYEKEHRPQFARLLSLLEHLPKKRLARSPSHPVNLSRSAESVF" BASE COUNT 1364 a 1287 c 1222 g 1122 t ORIGIN 1 ggatccctga agtgtggtat taatgacgag gcccccaatt ttctgatttc catttgcata 61 aatgtcattc ggccacttaa tggaaatatc cagcacctga aggtgatatg aataaattaa 121 gtaaaactcg cctatctccg taatattaca tatcataaaa tataaattgg aacatcaaat 181 attaacttaa aaaaattatt tttagttata aaattaaaat attaaaataa tatctaccta 241 atttccattt ccaaataata aaatataaat attaaaatat ttgacttatt tcgactaata 301 aaataaaaat gtgaaaataa tttctggatt aatttttcaa atagaattga aatatatatg 361 ctatatacac tcgaagacat aatataatta caacataaga ataataatac ttaacgttct 421 atttttttta aatacagagg agtgccccta agtttttcgg ataagtgctt ttagtacatt 481 ttggtgtgca gtgagaagga gtcctcccgg gtatggtcac acttctctcg atgcgctact 541 tgggtgtaga gaaatttcaa caacagccga ggaacttgta caaattattg ctttttcgca 601 ttgcctaagc cgtttagagt tgcgggcgtt agcgtgcgcg atagccggag caccgaacgt 661 caaggtcgct tggcgagggc cacaatgcgg ggcggagtcc cagccattgg tcccatcgaa 721 tcgtcgagtc cccgaggggg cgtctgaaaa aatcaatcgg gctccactcc gtcgcgaata 781 agcaggatga gcagcaacaa caacgcaccc gcatcggctc cagacacggg ctccaccaat 841 gccaacgatc ccatctccgg ttcgctgtcc gtagacagca acctggttat cattcaggac 901 atgattgatc tctcggccaa ccatctggag ggcctgcgaa cgcagtgcgc gatcagctcc 961 acgctgacgc agcaggagat tcgttgcctg gagtcgaagc tggtgcgata cttctccgag 1021 ctgctgctgg cgaagatgcg gctaaatgag cgcatcccgg ccaacgggct tgtgccccac 1081 acaacgggca acgaactgag gcaatggctg cgcgtagtgg gccttagcca ggggactctt 1141 accgcctgcc ttgctcgcct gaccactcta gagcaaagcc tgcgtctcag cgacgaggag 1201 atccgtcaac tcctggctga cagccccagc cagcgagagg aggaggaact gcgacgcctg 1261 accagggcca tgcagaactt aaggaagtgc atggagtcgc tggagagcgg tactgcggct 1321 agcaacaacg atccagagca gtggcactgg gactcctggg acaggcccac ccacattcat 1381 cgcggcagtg tgggaaacat tggactgggt aacaattcaa ccgcctcccc gagaacccat 1441 catcgccagc atggtgtcaa gggaaagaat tccgctctgg ccaactccac caacttcaaa 1501 agtggccgcc aatcgccctc agcgacagaa gagctgaaca gcacacaggg ttcccagctg 1561 actttaaccc ttacgccctc gccacccaat tcgcccttca cgccttccag tgggctgagc 1621 agcagcctta atggaacacc acagaggagt cgtggtaccc cgccgccagc tagaaagcac 1681 cagaccttgc tgagccagag tcatgtgcaa gtggacgggg agcaattagc ccgcaaccgt 1741 ttgcccactg atcccagccc cgatagccac agctccacca gctcggacat ctttgtggac 1801 ccaaatacta atgccagctc cggaggaagt tcctcgaacg tgcttatggt gccatgctct 1861 ccgggcgtgg gtcacgtggg catgggtcat gcaatcaagc atcgtttcac caaggccctg 1921 ggcttcatgg ccacctgtac cctgtgccag aagcaggtct ttcaccgctg gatgaagtgc 1981 accgactgca agtacatctg ccacaagtca tgcgcaccgc acgtaccgcc ctcctgtgga 2041 cttccacgag aatatgtgga cgagtttcgg cacataaagg agcagggagg atacgccagt 2101 ctgccgcatg tgcatggcgc ggcgaaagga tcccctttgg taaaaaagag caccctgggt 2161 aagcccttgc atcagcagca cggcgatagc agttcgccga gttccagctg cactagttcc 2221 acgcccagca gtccggcgct gttccagcaa agggagcgcg agctggatca ggcgggcagc 2281 agctctagcg ccaatctgtt acctacgcct tcgcttggca agcaccagcc gagtcaattc 2341 aactttccca acgtgacggt gacgagcagt ggcggaagcg gtggtgtatc gctcatctcc 2401 aatgaaccag tgccagagca attccccacg gcgcctgcaa cagccaacgg aggacttgat 2461 agtctggtga gcagctccaa cgggcacatg agctcgctca tcggtagcca aacttcaaac 2521 gcttctactg cggccacctt gacgggcagt ctggtcaata gcacaaccac caccagcacc 2581 tgcagtttct ttccgcgaaa attgagcaca gccggtgtgg ataagaggac gccgttcacc 2641 agcgagtaca cggataccca caagtcaaat gacagcgaca agacagtctc cttgtctgga 2701 agtgccagca cggactcgga ccggacaccc gttcgtgtgg attcaacgga agacggagac 2761 tcgggacaat ggcgccagaa ctcgatctca ctcaaggaat gggacatccc gtatggtgat 2821 ctgcttctgc tcgagcggat agggcaggga cgcttcggca ccgtgcatcg agccctttgg 2881 cacggagatg tggcggttaa gctgctcaac gaggactatc tgcaagacga acacatgctg 2941 gagacgtttc gcagcgaggt agccaacttc aagaacactc gacacgagaa cctggtgctg 3001 ttcatgggag cctgcatgaa cccaccatat ttggccattg tgacttcatt gtgcaagggc 3061 aacaccttgt atacgtatat tcaccagcgt cgggagaagt ttgccatgaa ccggactctc 3121 ctcattgccc agcagatcgc ccagggcatg ggctacctgc acgcaaggga gatcatccac 3181 aaagatctgc gcaccaagaa catcttcatc gagaacggca aggtgattat cacggacttt 3241 gggctgttca gctccaccaa gctgctctac tgtgatatgg gcctaggagt gccccacaac 3301 tggttgtgct acctggcgcc ggagctaatc cgagcattgc agccggagaa gccgcgtgga 3361 gagtgtctgg agttcacccc atactccgat gtctactctt tcggaaccgt ttggtacgag 3421 ctaatctgcg gcgagttcac attcaaggat cagccggcgg aatcgatcat ctggcaggtt 3481 ggccgtggga tgaagcagtc gctggccaac ctgcagtctg gacgggatgt caaggacttg 3541 ctgatgctgt gctggaccta cgagaaggag caccggccgc agttcgcacg cctgctctcc 3601 ctgctggagc atcttcccaa gaagcgtctg gcgcgcagtc cctcccaccc cgtcaacctt 3661 tcccgttccg ccgagtccgt gttctgaggg aactgcagca tggccactgt cactgtctag 3721 tacaatttcg atctaccaac taagctagct cgctttgtgc cctcgtccac tctacacaaa 3781 ctctctccca aggcgaagtt ctatcgagcc gagcgaagat tgtaaataca taaacgtaac 3841 taccaaatta tagcaatcca ttttaaaaac tacatacata tgtgtaggca tgtatcggga 3901 gcactccagt tgcagttgtt agcaaacgaa acaaaggcaa atcaaatgtt aactcgaaaa 3961 agacaaaacg cttaaatgtt taagagcaga ggcaaacaga gaaggcatag acatacatat 4021 acaaacaaac aaacaagcac tgtggcaaac ataaatgtaa acgttaatca ggtgagcaat 4081 ttctaaattg ttaattatgt gtaagagaac tatatatata tatatatata tatatatata 4141 tatatatata tatatacatg tatatacagc agcaatgtat tgtatatgac ggactagtgt 4201 taaattaaat atatattgtg aattatgtat ggtcaagtgt atatagtaaa tggactttaa 4261 atgcgaaatc gaaacaaaat gtcaaataaa cttattaaac ctaaaaaatc actttgtgca 4321 cttggcagtt ttacagatcc tgaggttcgt cccatcgtcc cacaggcgga gataatcgaa 4381 acaatcttaa cttaagattc aactaaatgg taaaacttta cagtcttgac tcaccccgta 4441 ctcttcatga ctgcggagcg aattaacaat cgccgttcca acaaggtgct gcaacagagg 4501 cagccgagag ctcaaagcgc tgtccatggt caggtgcagc tgcagcgaga acatggcaca 4561 gcccggcgga ctaagccact ggaaagcaca aagcgatgat ttcaacaaga acttaaatct 4621 ggatgcttct agagtactaa cttgattatt tctgcgaccc actccggacg tctgctgcac 4681 ggggagcaca gccaggccgt ggatgagctc caggttgttt atgagatgca tggagctgct 4741 gaccaccggt gcatagatga ccagtcgtcc gatgtgttcc gtcttaagat tctttaaaat 4801 aagaggaatt tgggttaatt ctgctataga ctagaattag aatgcgctca catcgaagta 4861 atccacggtg gagaagtcat ccggacagga atgtatgagt atgggcagga cattgttgtt 4921 ggccactgga ggcttatcgt ccttgccaca gaacttcatc gtcaggttcg gcgttgctat 4981 cacgttgtcg gatcc // LOCUS DMU46008 1183 bp DNA INV 20-SEP-1996 DEFINITION Drosophila melanogaster testes-specific proteasome subunit alpha-type gene, complete cds. ACCESSION U46008 NID g1220185 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1183) AUTHORS Yuan,X., Miller,M. and Belote,J.M. TITLE Duplicated proteasome subunit genes in Drosophila melanogaster encoding testes-specific isoforms JOURNAL Genetics 144 (1), 147-157 (1996) MEDLINE 97032933 REFERENCE 2 (bases 1 to 1183) AUTHORS Belote,J.M. TITLE Direct Submission JOURNAL Submitted (11-JAN-1996) John M. Belote, Biology, Syracuse University, 130 College Place, Syracuse, NY 13244, USA FEATURES Location/Qualifiers source 1..1183 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="92F" CDS 134..883 /codon_start=1 /product="testes-specific proteasome subunit alpha-type" /db_xref="PID:g1220186" /translation="MSSRYGRALTIFSPDGHLLQVEYGQEAVRKGSTAVGVRGANCVV LGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFEN QVTLEYITRYLAQLKQKYTQVNGRPSFGISCLIGGIDADGSARLFHTEPSGIFHEYKA TATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVAVLENGKP MKMLDSVVISEIVKIVQNEKELQAKAHKMKR" BASE COUNT 329 a 239 c 284 g 331 t ORIGIN 1 ataatcatta cactatgtgt agaacaaagg atttgacttc aaacttcaaa tgtaagaaaa 61 ttcatattgt ttcaagtaat aacttgtcac aagcaaattg ttgttttgtt ttgcctgcta 121 actaacccaa aggatgtcct cacgctacgg tcgagctcta accatattct cgccggatgg 181 ccacctgttg caggtggagt acggccagga agctgttcga aagggctcca cagcggttgg 241 cgttcgtgga gccaattgtg tggtgctggg tgtggagaag agctcggtgt ccgagatgca 301 ggaggatcgg acggtgcgca agatcagcat gctcgatcgc cacgtggcgt tggcatttgc 361 cggtctcacg gctgatgcac ggatccttat aaatcgaggg caggtcgagt gccagagcca 421 tcgactcaac ttcgaaaacc aggtgaccct cgagtacatt accagatacc ttgcccagct 481 caagcagaag tacacgcagg tcaatggacg tccgtctttc ggtatatcgt gtctaatagg 541 aggcattgac gccgatggct ctgcacgtct ctttcatacc gaaccatccg ggatattcca 601 cgagtacaag gcgaccgcaa ctgggcgttg ggcaaatact gtgagggagt tttttgagaa 661 ggcctatagc gatcatgaag tgacaaccaa atgtgatgcc atcaaactag ccatgcgtgc 721 ccttctcgaa gtaacccaga tgagccagat gcgcctggag gtggccgtat tggagaatgg 781 caagccaatg aaaatgctgg acagtgtagt aatttcggaa atagtcaaga tcgttcagaa 841 cgaaaaggag ctccaagcga aggcacataa aatgaagaga tgaattgcta cacctacaga 901 tcgttgattt tttatgttca tcaaattgtt attagatatt catgttatat tgttttggag 961 ctttgtttaa attttgttgt ttttgttttg tttttaaatt aattaatata cagttttaac 1021 catgttttga tgtttgtgaa ggattttatc tttgtataat gcagtaatta attaagatta 1081 cgactttaaa tttataactt ttgaatttca aatatgcaga tataaagcac tcactctaac 1141 gcccacgaac tgctcgtgca ggtcacccag gatagcaggt aca // LOCUS DMU52192 6831 bp DNA INV 15-JUN-1996 DEFINITION Drosophila melanogaster phosphoinositide 3-kinase (cpk) gene, complete cds. ACCESSION U52192 NID g1272419 KEYWORDS . SOURCE fruit fly strain=Oregon R. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 6831) AUTHORS Molz,L., Chen,Y.W., Hirano,M. and Williams,L.T. TITLE Cpk is a novel class of Drosophila PtdIns 3-kinase containing a C2 domain JOURNAL J. Biol. Chem. 271 (23), 13892-13899 (1996) MEDLINE 96278830 REFERENCE 2 (bases 1 to 6831) AUTHORS Molz,L.M. TITLE Direct Submission JOURNAL Submitted (22-MAR-1996) Lisa M. Molz, CVRI, University of California at San Francisco, 505 Parnassus Ave. Box 0130, San Francisco, CA 94143, USA FEATURES Location/Qualifiers source 1..6831 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /chromosome="3" /map="68D" gene 148..5778 /gene="Pi3K68D" /allele="" /db_xref="FlyBase:FBgn0015278" CDS 148..5778 /gene="Pi3K68D" /note="PtdIns 3-kinase" /codon_start=1 /product="phosphoinositide 3-kinase" /db_xref="PID:g1272420" /translation="MSNQAHIDYDKQFQDDLAKATALSLEQHALDDYRRNKKYGSGYQ QSSTVAGRDYQAAQRSQSLHQPRRHSEVHQVAISPENAERSRTPPAQGTDNDLICFAS PTSKQPESSSPFGKLIEDLQRMQPTNPQSALVPMGPVASASIPPQYGFPPHQQRPTAA QPTPYGMVAGGVVGGPAYGDLQLVPYQPAAQQQRPLNSEELQRLYSMPAQMAVVPVPQ PNAYMYYPGAVVTPYTAPIVPGSAAFMPPQYPAQGYGFGGAYTHMDLRRPQSQPAPQQ TAPTTSHHHSQPSNHSTSSPAEANGVAFPARRQVPSTVGVSSSSHTGNNGHSSVPRRG NDLIDLNHEDYSRVSVLEAFDPLLNDNTGNDTASDSTSYYAEYDPFDFLYSGDAATQY SDPMYEAVNRWDKTVATVSPNVGLIGWRQDFLSQPSTSSSQYGVAPPEESLKLAENGS GTISPPPPLPPRNQQCYESNQAAMPVSRPPQSSVLTDSYTSSIPANVVLDRRKTCTRL YELISDQRTDDPELLEFYHMVKEVRARYPHDDAPTNVGHVVAAEFNYHYMMDTSIKVI VHPALNTLQSTVLAASMGKEQVKGYGMPVTFTCDIDSVVAQVVAQALASLEGQVKGTV TDYAVKPIGLLEWLAPTSRLSQLECVHNSFQLEKDVHLGLCLSTAANMQAIARTERDD EHDADLLPEHLLPNEVVQIVTYDNMMILIETLEMEIDKLESAADGVPGRSVVSCSGVV QAVKAICALLGSIDTMEIARCVADLKRICEVEQKKYSTGASNPEIVSDYGDYAQVVLR PRSMLEQIKVKCNELRDAVQELVELYANVFRVAFSVKTPDYSTTPIPISCVSKPIVVC ISCLHRPLPNWKFDDYSLCVQIVYGTRLLSKPNVLTCSNDTSGGLFPRLNFSAWLTFD QHPICTLPREARLTFVLYGKQAASEGEPNADQNGERRQVTTELGWCSIQLFDFKRVMI CGPYLLSLWPPMTDKMLGPAPARGCHPQPDFCPVLSIEVPPYGGRIEFPEHQEVPKPA PHYDFASLDANLQEELLDTAELGYTGATERREVFWEKRLYLQSYPNALPKVLHAAHSW DYANLIDLHALLHSWAPLSPLQSLELLLPRYPDAKVREKAVEWISKMPNDQLVDFLPQ LVQSLKHDTYEGSAMARFLLSKCLESPRFAHHMYWLLVHSLPDDPHNSIGAAMVDQEY DESQVTQVRYYRRNKMMLRALMAICGEKMLQRFMYQHRMCQKLTTIAESVKEAKESMR QKSLAAGMDEVHQDLLEQPTCLPLGPELEVTGVSVRNCSYFNSNTLPLKINFVGPDAE SLPAIFKCGDDLQQDQLTIQLIRIMNKMWLAERLDLKMVTFNCVPTGYKSGMIELVSE AETLRKIQVECGLTGSFKDRPIAEWLGKQNPSPLEYQSAVRNFTLSCAGYSVATYVLG ICDRHNDNIMLKTSGHLFHIDFGKFLGDAQMFGNFKRDRTPFVLTSDMAYVINGGDKP STDFHYFVDLCCRAFNIVRKNADLLLHTLAHMATAGMPGVNSNAVQYVRRALLPSQSN PEAAATFAKMIQSSLKSWFTQFNFFLHNLAQMRFTPDEGSGELLSFVPRKYTMQQDGR LKIVKVVCFQKHYSMEKFYMYILEVTRHGQPDPTHLFRSYREFTEFHQKLCMHFPLVK LHSLPAGVHVGRSNIKSVAEKRLPLIQRFLKSLFDASEEIAHSELVYTFFHPLLRDQQ EAKLGMPKIKEVKQQPSRDNPHEIGQIRLSLQYQRGVLTVMIHHAKGLPMLQGGQEPN TYVKCYLKPDPKKETKRKTKVVRKTCVPSFMETLEYRMPLNIIQERRLQVTVWSHDTL QENELLGGFDMDLSKYDLRQELVDWYRLGAVSRN" BASE COUNT 1829 a 1684 c 1670 g 1648 t ORIGIN 1 gcttgttgca ttccgttttg tgttatttcg tgctccccgt caagggaaaa cctcaaccaa 61 aaagagacta gcaacgggtg taaaaagcag cggaggtgac acctcaaaaa gcaactcaac 121 ggaccggacg ctttagacga ggggataatg tcaaatcaag cgcatatcga ctacgacaaa 181 caattccagg atgacctggc caaggcgacc gccctgagtc tagagcagca tgccctcgat 241 gactacaggc gaaacaagaa gtacggctcc gggtatcagc aaagctccac cgttgctggc 301 cgagattacc aggcggcgca acgtagtcag agcctacatc aaccacgacg gcactcggag 361 gtgcatcagg tggccatcag tccggagaat gcggaacgat cgcgcacacc gccggcccag 421 ggaacggata acgatctgat ctgcttcgca agtcccacca gcaagcagcc agagagtagc 481 agtccctttg gcaaacttat agaggatctg cagcggatgc agccgaccaa tccgcagtcg 541 gccctggtgc caatgggtcc agttgcgtcg gcttcgattc ctcctcaata cggctttcca 601 cctcatcagc aacgtccaac ggctgctcag cccacaccgt acggcatggt tgcaggtgga 661 gttgttggtg gaccggctta cggtgacctg cagttggtgc cttaccaacc agctgcccag 721 caacagaggc cactaaacag cgaggagctg cagcggctgt acagcatgcc cgctcaaatg 781 gccgtggttc cagtgccgca gccaaacgcc tatatgtact atcccggagc tgtggttact 841 ccatacacgg ctcccattgt tcccggatcg gctgctttta tgccgccgca gtatcccgca 901 cagggatatg gctttggagg tgcttacacg cacatggatt tgcgtcgacc ccaatcgcaa 961 ccagctcccc aacaaacagc accgacaaca agtcatcatc acagccaacc gtccaaccat 1021 tccacttcct cccccgcaga ggccaatgga gtagccttcc cagcgcgtcg ccaagtgccc 1081 tcgactgtcg gggttagctc tagtagccac actggaaaca atggtcattc ctcggtccca 1141 cgcaggggca acgatttgat cgacctcaac cacgaggact actcccgtgt gagtgtgctg 1201 gaggcattcg atcccctgct aaacgacaat actggcaacg acaccgcctc cgacagcact 1261 tcctactatg cggaatacga tccctttgat tttctgtaca gcggagatgc agcaacccaa 1321 tattccgatc caatgtatga ggcagtcaac aggtgggaca aaactgtggc caccgtgagt 1381 ccgaatgttg gtctaatcgg ttggcgccaa gattttctga gccagccatc tacatcttca 1441 tcgcaatatg gtgttgcgcc gccagaggag agtctgaagc ttgcggagaa cggatctgga 1501 actatctcgc ctcctccgcc gttgccgccc cggaaccagc agtgctatga atcaaaccag 1561 gcagccatgc cggtctccag gcctcctcag tcttctgttt tgacggacag ctacacctcc 1621 agcattccgg ccaacgtggt gctggaccgg cggaaaactt gtacacgact gtacgaattg 1681 atcagcgacc agcgcactga tgatcccgaa cttttggaat tttaccacat ggtaaaggag 1741 gtgagggcac gctatccgca tgacgatgcg cccaccaatg tgggacatgt tgtggccgcc 1801 gagtttaatt atcactacat gatggacacc agcatcaaag tgattgtgca tccggctcta 1861 aatacacttc aatcaacggt cctggctgcg tccatgggca aggaacaggt gaagggatat 1921 ggaatgccag taacattcac ttgcgatatt gattcggttg tggcacaggt ggtggcacaa 1981 gctttggcct cgctggaggg acaagtcaag ggtaccgtca cagattatgc ggtcaagccc 2041 attggtcttc tggagtggct ggcacccacc tcgagactga gtcagctgga gtgcgtgcac 2101 aatagcttcc aattggagaa ggatgtacat ttgggcctgt gccttagtac ggcggcaaac 2161 atgcaggcta ttgcacgaac agagcgggat gatgagcacg atgcggattt gctgccggaa 2221 catcttcttc caaacgaggt tgtgcaaatt gtgacctacg acaatatgat gatactcatc 2281 gaaacgctgg agatggagat tgacaagctg gaatcggcgg ccgacggagt acccggacgg 2341 agtgtcgtga gctgctccgg agttgtccaa gcagtgaagg ccatatgcgc actgctcggt 2401 tcaatcgaca caatggaaat tgcacgatgt gttgccgatc tgaagcgcat ttgcgaggtg 2461 gagcaaaaga agtactcgac gggcgctagc aacccagaga ttgtgagtga ctatggtgat 2521 tacgctcaag ttgtactccg cccgcgctcc atgctggagc agatcaaggt caagtgcaac 2581 gagctgcgag atgcagtgca agagctggtt gaattgtatg cgaatgtttt ccgggtggca 2641 ttctccgtga agacgcccga ttactcaaca acacccatac ccatttcctg cgtgtccaaa 2701 ccaattgtgg tatgcattag ctgcctacac aggccgctgc cgaattggaa gttcgacgat 2761 tattccctgt gcgtacaaat cgtttatgga acgcgcctgc tgtcgaagcc gaatgtgctg 2821 acctgctcca acgatacaag tggaggcctg tttcctcgtc ttaacttcag tgcctggctg 2881 actttcgatc agcatcccat ctgcactctg cccagggagg cgcgccttac gttcgtgttg 2941 tatggaaaac aggcggccag cgaaggcgaa cccaacgccg atcagaatgg agagaggcgt 3001 caggtgacca ctgaactggg ttggtgttcg atccaactgt ttgactttaa gcgagtgatg 3061 atctgcggcc cctacttact gtctttatgg ccaccaatga cggacaaaat gcttggacca 3121 gctccggctc gaggctgtca tccgcaaccc gacttttgcc ccgttttgag cattgaagta 3181 cctccgtatg gaggacgcat tgagtttcct gagcaccagg aggtgccaaa acctgcacca 3241 cactacgatt ttgcctctct ggatgccaat cttcaagagg agctgctgga caccgcagag 3301 ctgggctaca caggagccac agaacgacgt gaagtgttct gggaaaaacg gctctacctg 3361 cagagctatc ccaatgccct gccaaaggtt cttcatgccg ctcacagttg ggattatgcc 3421 aatttgatcg atttgcatgc gctgctgcac tcctgggcac cactctcgcc attgcagtcg 3481 ttggagttac ttctgccacg atatccggat gctaaggttc gcgagaaagc cgtggagtgg 3541 atctccaaga tgcccaacga ccagctcgtc gactttctgc ctcaattggt gcaaagttta 3601 aaacatgaca catacgaagg ctcggcaatg gctcgattct tgctgtccaa atgcctggag 3661 tcaccgcgct ttgcccatca catgtattgg ctgcttgtac acagtctgcc tgacgatccc 3721 cacaactcta ttggagcagc gatggtggat caggagtatg acgagtctca ggttacccag 3781 gtccgttact accgccggaa caaaatgatg ctgcgtgctt taatggcgat ttgcggcgaa 3841 aagatgcttc agcgatttat gtaccagcac cgaatgtgtc agaaacttac tactattgcg 3901 gagtcggtta aagaggctaa ggagtcgatg cgtcaaaaaa gcctagccgc aggcatggac 3961 gaggtgcacc aagacttact ggagcaaccc acttgcctac cgctgggacc agaactggag 4021 gtaactggag tgagtgtgcg taactgtagc tactttaact ccaacacgct gccgctgaag 4081 atcaactttg tgggacctga tgccgaatct ttaccggcta tctttaagtg cggagatgac 4141 ttgcagcagg atcagttaac tatacagcta attaggatta tgaacaaaat gtggttggcc 4201 gaacgattgg acctgaagat ggtcaccttt aattgtgtgc ctacgggata caagagcggt 4261 atgattgagc tggttagcga ggcggaaacg ttgagaaaaa ttcaagtaga gtgcggtctg 4321 acggggtcct ttaaggatcg cccgatcgct gagtggttag gcaagcagaa tcccagtcct 4381 ctcgagtacc agagtgctgt gcgaaatttt acgctatcct gtgctggata cagtgtggcc 4441 acgtatgtgc taggcatctg tgatcgccac aatgacaaca tcatgttaaa gacttcgggt 4501 cacttgtttc acattgactt tggcaagttt cttggcgatg ctcagatgtt tggaaacttt 4561 aagagagatc gcactccatt tgtcctgact tccgacatgg cttatgtcat aaatggcggc 4621 gataagccct ccacagactt tcactatttc gtggacctat gttgtcgagc ctttaatatc 4681 gtgcggaaaa atgctgatct actcttgcac accctggccc acatggctac agcaggcatg 4741 ccgggagtaa actccaatgc tgtgcaatat gtacgacgcg ccctattgcc atctcaatcg 4801 aatcccgagg cagctgccac atttgccaag atgattcaat cctctttgaa aagctggttc 4861 acgcaattca atttctttct gcacaatctg gcccagatgc gtttcacccc agacgaggga 4921 tcaggagagc tgctatcgtt cgtgccacga aaatatacaa tgcagcagga tggtcgcttg 4981 aagattgtaa aggtggtgtg tttccagaag cattacagca tggaaaagtt ttatatgtat 5041 attctggaag tgacgcgaca tggacagccc gatccgacac atttgttccg gtcatatcgg 5101 gaattcacgg aattccatca gaagttatgc atgcactttc ctttggttaa actgcacagt 5161 ctgccggctg gtgtgcatgt gggccgttcc aatatcaaat ccgtggcaga aaaacgacta 5221 cctcttatac agcgattttt gaaatcgttg ttcgatgcgt ccgaggaaat agcccattcc 5281 gagctcgttt acacattctt tcacccgctg ctgcgcgatc agcaggaagc caagcttggg 5341 atgccgaaga taaaggaggt gaagcaacaa ccgtcgcggg ataatcccca cgagattggc 5401 caaatacgac tatcgctgca atatcaacgc ggcgtactta ctgtgatgat acaccacgcc 5461 aaaggactgc ccatgttaca gggcggtcag gagcccaaca catatgtgaa gtgctaccta 5521 aaaccggatc ccaaaaagga gaccaaacgc aagaccaaag tggtgcgcaa gacctgtgtg 5581 cccagtttca tggaaacttt ggagtaccga atgccactga atattattca agagcgccgc 5641 cttcaggtta cggtttggtc gcacgacacc ctgcaggaga acgagctgct tggaggcttc 5701 gatatggatc tgtcgaagta cgacctgcga caggagctcg tcgactggta tcgcctgggc 5761 gcggtgtcca ggaactgacc agatcctagg gacgagctat tttgaacctc ttgggacact 5821 ctgcctaccg acaatcaggc ctaggataat gcaatactaa tatatgtttg tgcctgtctt 5881 ctttcgatcg caataatact tacttactcg aagtgattgt acattccata taccaatatt 5941 aaaaataaca taacagtagt agtattattt cgtaaaatgt gtgcctcaaa tgtaaatatt 6001 ttataatgac cgcaaacaac attcttttgg acatctgaat gtaattataa ctataaagta 6061 tagaacatgc ttactctatt tacatttaaa atcaatcaat tttattgtgc accttgggaa 6121 ttcagaaaat gaattatatt ggtagtttgt ttgaatcgtt ctgtcgtcgg cacctggcaa 6181 ttgttctttt gaagtagtta aatataaaag ttcagtatta tggcttaaat tctataagag 6241 attattaaaa accttctagc tcgctggtct gtaatatcta aaattaaaac ttgcacgaag 6301 aataatcatt actaactttt ttgcactttt ctaattactt aaagtaaaaa gagaactaaa 6361 atttcctaaa gaaattaggc attgcaagca gaataacgca cagatacaga ttctttctga 6421 ttgtattttg tttgtcactt aatattcaca aaattgcttt gtcaaaagca aacgcctgac 6481 tgggtctaaa acaaatttac aaagttatag ggaattacta tcagagagaa caagaactaa 6541 aagtgtctta aaaatgaaac gaatattgta aaatatataa taagagcaca cacacaccgc 6601 aaacaacaaa ttatattttt atagaaaaaa gaaacattca aaagctactt ctgcctgagc 6661 atttcaaata gtactttgat actgattaaa aactacctaa gacgtatctg atgttttcat 6721 aaaattataa ttaataggaa aaaattaaat ttctgaagtg ttgaggaatc gtaaaaatgt 6781 tagctggcgg taatcacttt tggcacaaat atatgagcat aaaaaaaggc a // LOCUS DMU56257 1367 bp DNA INV 27-AUG-1998 DEFINITION Drosophila melanogaster intronic protein 259 (IP259) gene, complete cds. ACCESSION U56257 NID g3462348 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1367) AUTHORS Mottus,R.C., Whitehead,I.P., O'Grady,M., Sobel,R.E., Burr,R.H., Spiegelman,G.B. and Grigliatti,T.A. TITLE Unique gene organization: alternative splicing in Drosophila produces two structurally unrelated proteins JOURNAL Gene 198 (1-2), 229-236 (1997) MEDLINE 98036053 REFERENCE 2 (bases 1 to 1367) AUTHORS Mottus,R.C., Whitehead,I.P., O'Grady,M., Sobel,R.E., Burr,R.H.L., Spiegelman,G.B. and Grigliatti,T.A. TITLE Direct Submission JOURNAL Submitted (23-APR-1996) R.C. Mottus, Zoology, University of British Columbia, 6270 University Blvd., Vancouver, BC V6T 1Z4, Canada FEATURES Location/Qualifiers source 1..1367 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="2" /map="31E" gene 403..1182 /gene="IP259" CDS 403..1182 /gene="IP259" /note="ORF in the intron of the ubiquitin-80 (DUb80) gene" /codon_start=1 /product="intronic protein 259" /db_xref="PID:g3462349" /translation="MPQNEYMERHRKLYGRRLDYEERKRKKEARLPKDRARKARKLRG IKAKLFNKERRNEKIQIKKKIQAHEEKKVKKQEEKVEDGALPHYLLDRGIQSSAKVLS NMIKQKRKEKAGKWDVPIPKVRAQSDAEVFKVLKTGKTKRKAWKRMVTKVTFVGENFT RKPPKFERFIRPMGLRMKKAHVTHPELKATFNLPIIGVKKNPSSPMFTSLGVITKGTV IEVNISELGLVTQTGKVVWGKYAQVTNNPENDGVINAVLLV" BASE COUNT 455 a 287 c 303 g 322 t ORIGIN 1 ttgattctgt tgccgaagca aggtaagttt ttggggttgt tacattttaa gcatcggtta 61 agtgaaaata aacatacaaa tacatactta aagtagtcct taacacttgt aaactcttac 121 gagtgaaata catgacaatt gttgattgaa caatgagaat gattgcagtg cacatgtaaa 181 attgacaagc aatcaaaatt gctaaaagat acccgtgaac aaaaaaaata ttgtgacatt 241 taaatttata cattaaggta agtgaatttc cgcgtgatta gttatctgtg gatggccaca 301 gaggcttccc caggaaacaa atttcgcaca cccccaaccg tccacatgtt aataaccaca 361 tgaatgtatt tcagatctgg tctacagaat taacaattaa caatgccgca gaatgagtat 421 atggaacgcc atcgcaagct gtatggccgg cgattggatt acgaggaacg gaaacgcaag 481 aaggaagcgc gtcttcccaa agaccgagca cgaaaggctc gcaagttgcg cggcatcaag 541 gccaaactct ttaataagga gcgacgcaat gaaaagattc agattaagaa gaagatccag 601 gcccacgaag agaagaaggt caaaaagcag gaggagaagg tcgaggatgg agccctgccg 661 cattatctgc tcgacagagg catccagtcc agcgccaagg tcctgtccaa tatgatcaag 721 cagaagcgca aggagaaggc aggcaagtgg gacgtgccca ttcccaaagt acgcgctcag 781 tcagatgctg aggtcttcaa agtactaaag accggaaaga caaagcgaaa ggcatggaag 841 cgcatggtca caaaagtcac attcgttggc gagaacttca cacgcaagcc accaaagttt 901 gagcgtttca ttcgaccgat gggtctgcgc atgaaaaagg ctcacgttac gcatccagag 961 cttaaagcca ccttcaatct gcccatcatt ggcgtcaaga agaaccccag ctcgcccatg 1021 ttcacttcct tgggtgtaat tacaaagggt actgtgatcg aagtcaacat ctctgagctg 1081 ggtttggtaa cgcaaacggg aaaagttgtc tggggcaaat acgctcaggt cacgaacaat 1141 ccagaaaacg atggtgttat caatgcagtg ctgcttgtct aaccccgaaa atgtcgctac 1201 ctaatttaag agtttgattt aataaacaaa catatacaat aacatgaaca atcgtttgat 1261 tctcttagct tattatacta ttagctgtag caatgccata tatataaaca cacatatcta 1321 taccaacatc tttttgtttc ttgcagtttg gtgactggaa tacaaga // LOCUS DMU65589 2085 bp DNA INV 01-SEP-1996 DEFINITION Drosophila melanogaster Dfz2 (Dfz2) gene, complete cds. ACCESSION U65589 NID g1518050 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2085) AUTHORS Bhanot,P., Brink,M., Samos,C.H., Hsieh,J.C., Wang,Y., Macke,J.P., Andrew,D., Nathans,J. and Nusse,R. TITLE A new member of the frizzled family from Drosophila functions as a Wingless receptor JOURNAL Nature 382 (6588), 225-230 (1996) MEDLINE 96353971 REFERENCE 2 (bases 1 to 2085) AUTHORS Bhanot,P., Wang,Y. and Nathans,J. TITLE Direct Submission JOURNAL Submitted (30-JUL-1996) Molecular Biology and Genetics, Johns Hopkins University School of Medicine, 725 N. Wolfe St., 805 PCTB, Baltimore, MD 21205, USA FEATURES Location/Qualifiers source 1..2085 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="3" /map="76A" gene 1..2085 /note="frizzled 2" /gene="fz2" /allele="" /db_xref="FlyBase:FBgn0016797" CDS 1..2085 /gene="fz2" /standard_name="frizzled2" /note="wingless receptor" /codon_start=1 /product="Dfz2" /db_xref="PID:g1518051" /translation="MRHNRLKVLILGLVLLLTSCRADGPLHSADHGMGGMGMGGHGLD ASPAPGYGVPAIPKDPNLRCEEITIPMCRGIGYNMTSFPNEMNHETQDEAGLEVHQFW PLVEIKCSPDLKFFLCSMYTPICLEDYHKPLPVCRSVCERARSGCAPIMQQYSFEWPE RMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSGSGSGSGGKRKQGGSGSGGS GAGGSSGSTSTKPCRGRNSKNCQNPQGEKASGKECSCSCRSPLIFLGKEQLLQQQSQM PMMHHPHHWYMNLTVQRIAGVPNCGIPCKGPFFSNDEKDFAGLWIALWSGLCFCSTLM TLTTFIIDTERFKYPERPIVFLSACYFMVAVGYLSRNFLQNEEIACDGLLLRESSTGP HSCTLVFLLTYFFGMASSIWWVILTFTWFLAAGLKWGNEAITKHSQYFHLAAWLIPTV QSVAVLLLSAVDGDPILGICYVGNLNPDHLKTFVLAPLFVYLVIGTTFLMAGFVSLFR IRSVIKQQGGVGAGVKADKLEKLMIRIGIFSVLYTVPATIVIGCYLYEAAYFEDWIKA LACPCAQVKGPGKKPLYSVLMLKYFMALAVGITSGVWIWSGKTLESWRRFWRRLLGAP DRTGANQALIKQRPPIPHPYAGSGMGMPVGSAAGSLLATPYTQAGGASVASTSHHHLH HHVLKQPAASHV" BASE COUNT 404 a 663 c 612 g 406 t ORIGIN 1 atgagacaca atcgactgaa ggtcctgatc ctgggactcg tcctcctgct gacatcttgt 61 cgagcggatg gaccgctgca cagtgcggat cacggcatgg gcggaatggg catgggtggt 121 cacggcctgg acgcgagtcc cgcacccggt tacggagtgc cagccatacc caaggatccc 181 aatctgcgat gcgaggagat caccatacca atgtgtcggg gcattggcta caacatgaca 241 tccttcccca acgaaatgaa ccatgagacc caggacgaag cgggcctgga ggtgcaccag 301 ttctggcccc tggtggagat caaatgctcg ccggacctca agttcttcct gtgcagcatg 361 tacacgccca tctgcctgga ggattaccac aagccgctgc ccgtttgccg gagtgtctgc 421 gagagagccc gctcgggatg cgcacccatc atgcagcagt acagcttcga atggccggag 481 agaatggcgt gcgagcactt gccccttcat ggtgaccccg acaatctgtg catggaacag 541 ccctcgtaca cggaggctgg cagcggtggc agctcgggcg gatcgggtgg ctctggcagc 601 ggttccggct ccggcggcaa acggaagcaa ggaggcagtg gctcgggcgg cagtggggcc 661 ggcggcagca gcggttccac ctcaacgaag ccgtgccgcg gacgcaattc aaaaaactgc 721 caaaatcccc aaggagaaaa ggcaagcgga aaagagtgca gctgctcgtg ccgctcccca 781 ctcatcttcc tggggaagga gcagctgctg cagcagcagt cgcagatgcc catgatgcac 841 catccacacc actggtacat gaacctcact gtccaaagga tcgccggcgt tccaaactgc 901 ggcataccgt gcaaggggcc cttcttcagc aacgacgaaa aggatttcgc cggcctctgg 961 atcgccctgt ggtcgggact gtgcttctgc agcacgctca tgaccctaac cacattcatc 1021 atcgacaccg aaaggtttaa gtacccggag cggcccattg tcttcctctc cgcctgctac 1081 ttcatggtgg cagtgggcta cctgtcgcgc aacttcctgc agaacgagga gatcgcctgc 1141 gacggcctgc tgctccggga aagctccacg ggtccgcact cttgcaccct ggtcttcctg 1201 ctcacctact tctttggcat ggcctcgtcc atctggtggg tgatcctcac tttcacctgg 1261 ttcctggccg ctggtctgaa gtggggcaat gaggccatca ccaagcactc gcagtacttc 1321 catctggccg cctggttgat tcccactgtc cagtccgtgg ccgtactcct gctctcggcg 1381 gtggatggcg atcccattct gggcatctgc tatgtgggca acctcaatcc ggatcaccta 1441 aagacctttg tgctggcccc gctcttcgtt tacctcgtaa tcggcaccac cttcctgatg 1501 gccggctttg tgtccctctt ccgcatccgc tcggttatca agcaacaggg cggtgtagga 1561 gctggtgtca aggcggacaa gctggagaaa ctgatgatca ggattggcat cttctcggtg 1621 ctctacacgg tgccggccac catagttatc ggatgttacc tgtacgaagc agcctacttt 1681 gaggactgga tcaaggccct ggcctgtcca tgcgcccagg tgaagggtcc cggcaagaag 1741 cctctctact cggtcctgat gctcaagtac ttcatggccc tggccgtggg catcacctcg 1801 ggcgtgtgga tctggtctgg caagacgctg gagagctggc gacgcttctg gcggagactc 1861 ctaggagcgc cggaccgcac gggcgccaac caggcgctga tcaagcagcg gcctccgatc 1921 ccgcatccct atgccggatc tggaatgggc atgcccgtgg gctcggcggc gggctccctg 1981 ctggccacgc cctacaccca ggcgggcgga gcctcggtgg cctccaccag ccaccaccac 2041 ctgcaccacc acgttctcaa gcagccggcg gccagccacg tatga // LOCUS DMU71219 3570 bp DNA INV 25-APR-1997 DEFINITION Drosophila melanogaster males-absent on the first (mof) gene, complete cds. ACCESSION U71219 NID g2039274 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3570) AUTHORS Hilfiker,A., Hilfiker-Kleiner,D., Pannuti,A. and Lucchesi,J.C. TITLE mof, a putative acetyl transferase gene related to the Tip60 and MOZ human genes and to the SAS genes of yeast, is required for dosage compensation in Drosophila JOURNAL EMBO J. 16 (8), 2054-2060 (1997) MEDLINE 97299882 REFERENCE 2 (bases 1 to 3570) AUTHORS Hilfiker,A. TITLE Direct Submission JOURNAL Submitted (18-SEP-1996) Biology, Emory University, 1510 Clifton Rd, Atlanta, GA 30322, USA FEATURES Location/Qualifiers source 1..3570 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="1" /map="5C3" gene 623..3106 /gene="mof" CDS 623..3106 /gene="mof" /codon_start=1 /product="males-absent on the first" /db_xref="PID:g2039275" /translation="MSEAELEQTPSAGHVQEQPIEEEHEPEQEPTDAYTIGGPPRTPV EDAAAELSASLDVSGSDQSAEQSLDLSGVQAEAAAESEPPAKRQHRDISPISEDSTPA SSTSTSSTRSSSSSRYDDVSEAEEAPPEPEPEQPQQQQQEEKKEDGQDQVKSPGPVEL EAQEPAQPQKQKEVVDQEIETEDEPSSDTVICVADINPYGSGSNIDDFVMDPDAPPNA IITEVVTIPAPLHLKGTQQLGLPLAAPPPPPPPPAAEQVPETPASPTDDGEEPPAVYL SPYIRSRYMQESTPGLPTRLAPRDPRQRNMPPPAVVLPIQTVLSANVEAISDDSSETS SSDDDEEEEEDEDDALTMEHDNTSRETVITTGDPLMQKIDISENPDKIYFIRREDGTV HRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHRISDNADDLGGITVLPAPPL APDQPSTSREMLAQQAAAAAAASSERQKRAANKDYYLSYCENSRYDYSDRKMTRYQKR RYDEINHVQKSHAELTATQAALEKEHESITKIKYIDKLQFGNYEIDTWYFSPFPEEYG KARTLYVCEYCLKYMRFRSSYAYHLHECDRRRPPGREIYRKGNISIYEVNGKEESLYC QLLCLMAKLFLDHKVLYFDMDPFLFYILCETDKEGSHIVGYFSKEKKSLENYNVACIL VLPPHQRKGFGKLLIAFSYELSRKEGVIGSPEKPLSDLGRLSYRSYWAYTLLELMKTR CAPEQITIKELSEMSGITHDDIIYTLQSMKMIKYWKGQNVICVTSKTIQDHLQLPQFK QPKLTIDTDYLVWSPQTAAAVVRAPGNSG" BASE COUNT 980 a 908 c 882 g 800 t ORIGIN 1 aggataggat atcggaacca atccttttgt cggacggtgg ccatagcaac acgcgtcaca 61 ttatatagat atatatacat aacttcatat aagtacggga cccacgtgat ctgactatac 121 tcggcgggtt catgtcatgg tctccgcata atccaactct gtgtacggct tatcgcatat 181 aggaactccc tatcgtaaca gagagctcga cttcttcatt tgttatctat gcatttaaga 241 ttttttaaga attccaaatt catgccgtgc ttttagctgt ctgtatttag caatgtacac 301 aaatcaacta ccaataattg tttgcgcgtt aattctgtag gatagatgtt caataaaaat 361 ttcgaaatca gttccaattt tctaaagtgc tttctctgaa ggttttggat aaataaaata 421 tattataata ctgaatgcac agaaaaatcc agaagggtaa tttcaaaaag ggtgcaaagt 481 attgtacatc gataaccacc gattaataat cgattatctg gacatgttgt gataaatcag 541 ggttgcattt cacgccgtat ttcgtttcat ttccctaaag agtgaacaaa aatacgcaat 601 tggacaaatc tagtggctaa gaatgtctga agcggagctg gaacagacac ccagcgcggg 661 ccacgtgcag gagcagccga ttgaggagga gcatgagccg gaacaggagc caaccgatgc 721 gtacacaatt ggcggtccgc cgaggacgcc ggttgaagat gcggcggccg aattgagcgc 781 cagtctagac gtcagcggct cggatcagtc ggcggagcag tcgctcgacc tcagcggtgt 841 ccaagcggag gccgcggcgg agtcagagcc accggcgaag cgccagcatc gcgacatcag 901 tcccatttcg gaggacagca cgccggcgag cagcacatcg actagttcca ccaggtcgtc 961 cagctcctcc cgctacgacg atgttagcga ggcggaggag gcaccaccgg agcccgagcc 1021 ggagcaacca cagcagcagc agcaggagga aaagaaggag gacggtcagg atcaggtgaa 1081 gtcaccaggt ccagttgaat tggaggcaca ggagcccgcg cagccgcaga agcagaaaga 1141 ggtggtggac caggaaattg aaaccgagga tgagccctcc tccgatacgg taatctgcgt 1201 ggccgacatc aacccctacg gcagtggttc caacattgac gacttcgtta tggatcccga 1261 tgctcctccc aatgcaataa tcaccgaggt ggttaccatt ccagctcctc ttcatctcaa 1321 agggacacaa caactggggc tgccattggc tgccccaccg ccaccaccac ctcctccagc 1381 agcggaacaa gtccccgaga ctcccgcctc gcccacagat gacggcgagg aaccaccagc 1441 agtatattta tccccctaca tacgctctcg ctacatgcag gaatcgacac ctggcctgcc 1501 cacccgcctg gcgccgcgtg atcctcgcca gcgcaacatg ccgccgccag ccgtagttct 1561 gcccattcaa accgtactta gcgccaacgt tgaggccatt tctgacgaca gcagcgaaac 1621 tagcagcagc gatgacgatg aagaggaaga agaggacgaa gatgatgcct tgaccatgga 1681 gcacgacaac acttccaggg agacggtcat cacaacaggt gaccctctga tgcaaaagat 1741 cgatataagc gaaaatcccg acaagatcta ttttattcgg cgcgaggatg gcaccgtgca 1801 ccgtggccag gtgcttcagt ctcgcaccac tgagaatgcg gccgctcccg atgagtacta 1861 cgtccactat gttggtctca atcgccgcct ggacggatgg gtgggcaggc ataggatctc 1921 ggacaatgcg gatgacttgg gcggtattac cgtgctgcca gcgccaccat tagcccccga 1981 tcagccaagt actagcaggg aaatgctcgc ccaacaggcc gccgcggcgg cagctgcctc 2041 ctccgaacgg cagaagcgtg cggccaacaa ggattactat ctgtcctatt gcgagaacag 2101 tcgctatgac tacagcgacc gcaagatgac acgctaccag aagcggcgct acgatgagat 2161 caaccacgtg cagaagagcc acgctgagct gaccgccacg caggcggcgc tggagaagga 2221 gcacgagtcc attacgaaga tcaagtacat tgataagctg cagtttggca actacgagat 2281 cgacacctgg tactttagtc ccttccccga agaatatggc aaggcacgta cgttatatgt 2341 ttgcgagtac tgcctaaagt acatgcgctt caggtcgagc tatgcctatc atctgcacga 2401 atgcgaccgc aggcgtccgc ccggaagaga gatctaccgc aagggcaata tatccattta 2461 cgaagtgaac ggcaaggagg agtcactata ctgccaactt ttgtgtctga tggccaagct 2521 ctttttggac cacaaggttc tatacttcga catggacccg tttctctttt acatcctttg 2581 cgagacggac aaggagggca gtcacattgt gggctatttc tccaaggaaa agaagtcgct 2641 ggaaaactac aacgtggcct gcattctggt attgccgccg catcagcgta agggatttgg 2701 aaagctacta atagccttta gctatgagct gtcgcgcaag gagggcgtaa tcggtagtcc 2761 ggagaaaccg ctctcggatc tgggtaggct gagctatcgc agctattggg catacacgct 2821 gctggagctg atgaaaaccc gctgcgctcc agagcagatc acaatcaagg agctgagcga 2881 aatgagtggc atcacccacg acgacattat ctacacgctg cagtccatga agatgatcaa 2941 gtattggaag ggccagaatg tcatttgcgt tacgtccaag accattcaag accacctcca 3001 gctgccgcag ttcaagcagc ccaagctgac catcgacacc gattacctcg tctggagtcc 3061 gcaaactgca gcggcagtgg tcagagctcc gggaaattcc ggctagcata cggaacctgg 3121 agaccccgtt ctgctatcat cgcatataat tgttattgac gatgacgatt aggttttttt 3181 tttttatttt tttttaaaga aagcgtagga ataagctatt ctattgcacc cctccaaacg 3241 aaaaatgtat agtcatatat ctaaatggaa ccatcagaag gttcaatgta atacttaaca 3301 tttggtttac aatttttttt ttttatagtt aaggagtttt acggataggc tgttgtaact 3361 cttaatgata gaaccaaatg tctaattcgt ttggctaatg tttttggaga aggaatttgg 3421 aacaaccatt taaaaatttt aaaaacttct gtgttcttga aatatatatc tttaactact 3481 ttatctcgaa aaactctgga cttgttaaaa accaaataaa cttccacagc agccgatatg 3541 ccgacgcctg aagagaatac atctctatga // LOCUS DMU73490 1985 bp DNA INV 05-NOV-1996 DEFINITION Drosophila melanogaster putative phosphatidyl-inositol-4-phosphate 5-kinase (skittles) gene, complete cds. ACCESSION U73490 NID g1657963 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1985) AUTHORS Knirr,S. and Renkawitz-Pohl,R. TITLE Direct Submission JOURNAL Submitted (06-OCT-1996) Zoology (Developmental Biology), Philipps University of Marburg, Karl von Frisch Str., Marburg 35032, Germany FEATURES Location/Qualifiers source 1..1985 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="2" /map="57B" gene 53..1441 /gene="skittles" CDS 53..1441 /gene="skittles" /codon_start=1 /product="putative phosphatidyl-inositol-4-phosphate 5-kinase" /db_xref="PID:g1657964" /translation="MSMCASPLRELSNPGASGSIFYLTTDDEFIIKTVQKKECEFLQK LWPGYYMNLSQNPRTLLPKFFGLYCFHYNSKNVRLVAMNNLLPSDIKMHCKYDLKGSS FRRKASKAERQKASPTFKDLDFAEHHPNGIFLETDKYNSLMSTIKRDCMVLESFQIMD YSLLVGIHNLDLAAKEKREERILNARAKLQRKESAAQGPPSLNPDDDAPEADQNQLQA VASYASIPGTSAGAALNRTRSMNRQRLVAHSTALESITADMDVPLEEDEDVPAGGIPA RSENDERLILYIGIIDILQSYRLEKKLEHTFKSILYNGDTVSVCRPSFYAKRFQDAMG KQVFKKTPTFPLKHSPSKRKTSTTQLRSPASRLPPLSTPTNAVRQPIMTMSGMSTPPP AFDDMLGGGHNRRFHQLAPAAEKQQSVEQQSGRDRVPSGKGTTREEAAESPAAPITLN TRTTAPGEQEAP" BASE COUNT 510 a 566 c 520 g 386 t 3 others ORIGIN 1 ggcctttcgc tacttccgag atctgttcgg aatcgcaccc gatgacttcc tcatgtccat 61 gtgtgcgtct cccctgaggg agctttccaa tccgggtgcc tctggttcca tattttacct 121 gacgaccgac gacgagttca ttatcaagac ggtgcagaag aaggaatgcg agttcctgca 181 aaaactttgg cccggttatt acatgaacct atcgcagaat cctcgaacgc tgctgcctaa 241 gttcttcgga ctgtattgct tccactacaa ctcgaagaac gtgcggttgg tggccatgaa 301 caacctgttg ccttcagaca ttaagatgca ctgcaagtac gaccttaagg gatcttcctt 361 ccgacgaaag gcctccaagg cagagcgaca aaaggcgagt cccacgttta aggacctcga 421 ctttgctgag caccatccga atggcatatt cctggagacg gacaagtaca attcactgat 481 gagcaccatt aagcgggact gtatggttct ggagagtttt cagattatgg actactcgct 541 gttggtggga atccacaacc tggacctggc cgccaaggag aaacgcgaag aacgaatcct 601 aaatgcgcga gctaagctgc agcgcaagga aagcgccgct cagggaccac cttccttgaa 661 tccggacgac gatgctccgg aagcggatca gaatcagctc caagcggtgg cctcatacgc 721 ctccataccg ggaacttcgg ctggagctgc cctgaatcga acgcgcagta tgaatcgtca 781 gcgtttggtg gcccattcca ctgcactgga gtccattacg gctgatatgg atgtgccgct 841 cgaggaggac gaggacgtac ccgccggcgg cattccggct cgttctgaaa acgacgagcg 901 gttgatcttg tacatcggca tcatcgacat tttgcagtcg tatcgcctgg aaaagaagct 961 ggagcacaca ttcaaaagca ttctgtacaa cggagacaca gtgtccgtgt gccgaccctc 1021 cttctacgcc aagcgcttcc aggacgccat gggcaaacag gtgttcaaga agacgcccac 1081 atttccactg aaacattccc cctccaagcg caaaacctcg accacgcagc tgcgctcgcc 1141 ggcatcgcgc ttaccgccat tgagtacacc aacaaatgca gttcgtcagc cgatcatgac 1201 gatgtcgggc atgtcgacgc cgccgccggc cttcgatgac atgctcggag gaggacataa 1261 ccgccgcttc caccagctcg ctccagcagc agagaagcag caatcagtcg aacaacaatc 1321 ggggcgagac agagtgccct cagggaaggg aacaacacga gaggaggcag cggagagccc 1381 agcagcacct atcacactca atactcgtac gacagctccg ggcgaacagg aagcgccttg 1441 accagcsact acaggcgacg atgagtccac gggaacggat ctgagctcgc ggttgcccaa 1501 cstgcgcacc caccggctaa caaagacgag tgttcaggtc acgacggttg gctatgtaga 1561 gggggtggac acgccgaagg gcgggcagga tgtggtgcat gcagatgtca acggcaagac 1621 caccatgacg accaccacca tgctgacgac gacaaagacg gcacacatcc aggcgcccag 1681 ctacacgtcc acgctcgtgc tcaacgattt gccgcgttga ttttcagtgc gggattggtc 1741 gggatatgaa aggaatcctg agcagcagca ggagcatgta tatatatagc ccaaatgtgt 1801 atgtgtgtct gcaaggtgaa agcgtcactt ccacgcccaa aaagggaaat tctgaaaacg 1861 agctcgttta tcttgattaa acacaaaacc gaaaagcgaa tacgtattcg atattgaaat 1921 ttatgtggng cccgtgctaa ttgactgcca actagacacg ctaccccccc ccccccccca 1981 acccg // LOCUS DMU84749 1585 bp DNA INV 03-DEC-1997 DEFINITION Drosophila melanogaster cuticle protein LCP65Aa gene, complete cds. ACCESSION U84749 NID g1857599 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1585) AUTHORS Charles,J.P., Chihara,C., Nejad,S. and Riddiford,L.M. TITLE A cluster of cuticle protein genes of Drosophila melanogaster at 65A: sequence, structure and evolution JOURNAL Genetics 147 (3), 1213-1224 (1997) MEDLINE 98043412 REFERENCE 2 (bases 1 to 1585) AUTHORS Charles,J.P., Chihara,C., Nejad,S. and Riddiford,L.M. TITLE Direct Submission JOURNAL Submitted (03-JAN-1997) Zoology, University of Washington, Box 35-1800, Seattle, WA 98195-1800, USA FEATURES Location/Qualifiers source 1..1585 /organism="Drosophila melanogaster" /strain="iso-1" /db_xref="taxon:7227" /chromosome="III" /map="65A 5-6" gene 846..1154 /gene="LCP65Aa" CDS 846..1154 /gene="LCP65Aa" /codon_start=1 /product="cuticle protein LCP65Aa" /db_xref="PID:g1857600" /translation="MKSILVLACLLSALCLAAAAPDAEIVDLVSDVNADSYSYKFETS DGTKQEQHGSLKSLGPEEDALQVAGSFSFVGDDGQTHAISYVADENGFQPQGEDIPHL " BASE COUNT 477 a 299 c 339 g 470 t ORIGIN 1 tcttcggcca cgtaggtgac ggtgtaggtc tggccatcag ggcccacgta gctgaaggag 61 ccgtgggttg agatggcttc tagctcggtg ccggcgttct tcagcacacc ctcctcgctc 121 ttcgaggtac cgtcgctggt ttcaactctg tcggagaagg gggttgcatc ggaattacat 181 actcgaattg ccatctatgc gctttaagaa cttacgcata tgagtagtta tcgattccaa 241 cattgctatc cgatcgcagg acctcgacag taggggcagc cagggccacg gcaaagaggg 301 cgaacaggac gatggcgaat ttcatattga agacgtggta gatcgttgaa gactcaatga 361 ttactatact gtttagggcg tattctcagt ttatttatag ttcaactctt tgggcaaaag 421 cacgcgctac agcaatcaaa actagtttcg gctaagctaa gcttaaaact tgaaatctat 481 agtttgagct aataaatgtg gatcgaaatt taaacgaaaa gtttagaagc ttggtttata 541 tgcaaaattt aattttaata tattgtaatt gtctgaaagg cgtttggaga aaatctttag 601 agtttaattg tttaacaatt ttattccgct tattaaaaaa tcttgaattt tctttttgag 661 tattagattt ttaataaata aattgaacag aagttcaatt aacacctgct gtcctcagat 721 cgcgtcggct atataatgtt aacgacttgt cccaaagtgc taattgcata agctgtctta 781 gcaatcgtat aaaagactcc tgcaatctgg cattttgaat attgagtaat ttttgactat 841 tcaagatgaa atccatcctt gtgctcgcct gccttttaag tgccctgtgc ctagctgctg 901 ccgctccgga tgcagagatt gttgacctgg tgtccgatgt caatgccgat agctatagct 961 acaaatttga gacaagcgat ggcaccaagc aggagcagca cggctccctg aagagccttg 1021 gtcccgagga ggatgccttg caggtggccg gatccttcag cttcgtagga gacgacggac 1081 agacgcatgc catcagctac gtggccgatg agaacggatt ccaaccccag ggcgaggata 1141 ttccccacct ataaatcggt gtatgatggt aattaaaaag gtcttctagt tgaaaactag 1201 aaatcaattg gaaaaacaag tcattaaatc gaaataggct cagaaaccat aatactgaat 1261 aaccttttat cgtagctcag tttaaataaa gaataaaacc aattgttatg ttccttaaaa 1321 atatttttaa gattagtacc ttcgtaaatt ttttagatgg aacatcttgt atattgatca 1381 tttgaatcaa aagaaataaa agtgtgaatt ttcatagcta aatacgataa aatagaaaat 1441 aactctggta cttcgttata attataaagg aaagttatct agtgcagttt catattttga 1501 atgaccttcc cagaactggg tgacttactt tatggggtcc acaaagaaaa catatttttt 1561 cgaaatcgaa attcggcttt aatgc // LOCUS DMU84750 841 bp DNA INV 03-DEC-1997 DEFINITION Drosophila melanogaster cuticle protein ACP65A gene, complete cds. ACCESSION U84750 NID g1857601 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 841) AUTHORS Charles,J.P., Chihara,C., Nejad,S. and Riddiford,L.M. TITLE A cluster of cuticle protein genes of Drosophila melanogaster at 65A: sequence, structure and evolution JOURNAL Genetics 147 (3), 1213-1224 (1997) MEDLINE 98043412 REFERENCE 2 (bases 1 to 841) AUTHORS Charles,J.P., Chihara,C., Nejad,S. and Riddiford,L.M. TITLE Direct Submission JOURNAL Submitted (03-JAN-1997) Zoology, University of Washington, Box 35-1800, Seattle, WA 98195-1800, USA FEATURES Location/Qualifiers source 1..841 /organism="Drosophila melanogaster" /strain="iso-1" /db_xref="taxon:7227" /chromosome="III" /map="65A 5-6" gene 257..562 /gene="ACP65A" CDS 257..562 /gene="ACP65A" /codon_start=1 /product="cuticle protein ACP65A" /db_xref="PID:g1857602" /translation="MLVVGSIALLLALASARPQNDVEVLEYESENTGLGGYKFSYKLS DGTSRTEEGVVNNAGTDNESISIRGSVTWVAPDGQTYTINFVADENGFQPEGAHLPK" BASE COUNT 216 a 224 c 205 g 196 t ORIGIN 1 agctgcttgg ctttcttcca caattgtgca aatttatgac gtttgcaaat gcagccgcga 61 gtgcagtata aaatgcagtg gacgccgatg caacgccacc attagacaac tgccagtttg 121 tccagccgca taggagaatc tgcaatttcg agaaccgctc aacatgatga aattggtagg 181 tgaacttgga taaacgaggc gcaccatgcc caaccaggat acgcaaaagg atacctaatc 241 tcttaccgcc ttgcagatgc tagtcgttgg ctcgatagcc cttctcctgg ccctggccag 301 tgcccggccg caaaatgatg tggaagttct tgagtacgaa tcggagaaca ccggcctcgg 361 cggctacaag ttcagctaca aactgagcga tggcaccagt cgaacagagg agggcgtggt 421 caacaacgcg ggcaccgaca acgaatccat atccattcgg ggatccgtca cctgggtggc 481 tcccgatggc caaacctaca ccattaactt tgtggccgac gagaacggtt ttcagccgga 541 gggtgcccat ctgcccaagt agacctccgc tttcgaggag atcctgtaaa taccaccttc 601 ccgaatgaac ccacaattcc aaccaaccag ccatacagtg aggtgctaag gtcctgtccg 661 gaggagctgt ccttgtcccg tggcagccaa tcggtcagtc agttagtaag tcgatcagtc 721 agtcaagtca gtgtcgtgca ttgttttcta ttttccttgt tactcgcatt aaagccgact 781 ttcgattctc gaaaaaaata tgttttcttt gtggaaccat aaagtaagtc accattctgg 841 g // LOCUS DMU90947 2073 bp DNA INV 16-JAN-1998 DEFINITION Drosophila melanogaster accessory gland protein Acp76A (Acp76A) gene, complete cds. ACCESSION U90947 NID g2772607 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2073) AUTHORS Wolfner,M.F., Harada,H.A., Bertram,M.J., Stelick,T.J., Kraus,K.W., Kalb,J.M., Lung,Y.O., Neubaum,D.M., Park,M. and Tram,U. TITLE New genes for male accessory gland proteins in Drosophila melanogaster JOURNAL Insect Biochem. Mol. Biol. 27 (1997) In press REFERENCE 2 (bases 1 to 2073) AUTHORS Wolfner,M.F., Harada,H.A., Bertram,M.J., Stelick,T.J., Kraus,K.W., Kalb,J.M., Lung,Y.O., Neubaum,D.M., Park,M. and Tram,U. TITLE Direct Submission JOURNAL Submitted (25-FEB-1997) Genetics and Development, Cornell University, 423 Biotechnology Building, Ithaca, NY 14853-2703, USA FEATURES Location/Qualifiers source 1..2073 /organism="Drosophila melanogaster" /strain="Canton S" /note="products of this tissue form part of the seminal fluid" /db_xref="taxon:7227" /chromosome="3" /map="75F/76A" /tissue_type="accessory gland" /sex="male" gene 862..2028 /gene="Acp76A" CDS 862..2028 /gene="Acp76A" /function="responsible for physiological and behavioral changes in mated female flies" /codon_start=1 /product="accessory gland protein Acp76A" /db_xref="PID:g2772608" /translation="MGNHQVTFLVLCTSLLFQNTIQQNVSFQLIREIDRYTPENFVLS VLNIEMILFEIHAAKAVESNNDLERSLIINFGYSEARQEVLDWGLRYKKASSAKFQMA NKVAVSQKLPLSQKLRLVNEVLMTSAKKYDVTKDVRPSKLMDEWLSSHLDGVLANFVQ EKKLNAGENIVAISGMTVTPLWASHFQSEINRYFVNNPGTGYASKDPTCVPMMHSLSS FETMSTDEAKGIYIPFSSANLGMLILLPRKGVTCKDILDNLNNQINVEYNDHKDVHLL LPIFKEKFDYNIAKFFNGINIEDTFKDSAFKSKAKIKINNFRVNHGIRFQPILRLEVV DDINTGKTETFEVNRPFVFVIKDKVNVYAVGRIENLDGLTDKVNCSKKYADLKS" misc_feature 877..2073 /note="overlaps with the sequenced cDNA" /evidence=experimental polyA_site 2073 /note="19 A nucleotides sequenced in the cDNA" /evidence=experimental BASE COUNT 678 a 391 c 447 g 557 t ORIGIN 1 atatcaagct tatgactctt ggataagcca ttgatatagc aattgtaaat atattatgtg 61 caattctcct tattttctaa gacattctta ataatataat gcgaactaag gttacattcc 121 atctgcgcat gcgtgagtcc ttttgctcag caggaacgaa agtacaacgg gtcgtatgag 181 ttatggcaat cgaatgggca cacgtggccg ccggtccaat ggccagtaaa tcaaactttt 241 tggcagggcg agtaaacagt gttataaatc agaaaaccgc aaggcagcca ccaggcagct 301 accatattgt ccatggagga aagcagacag ttggcagact taagtcggac gaaaagacat 361 ccacccacgc gggcggattg caatgtgcca ggatgcaagt gacgcatagt gctattaaca 421 tattaccagg cggtaagtgg gtggataaca cattcagtcg gtggatggaa gtacgtgcat 481 agaacataga gctgccagtg aatattggag caattggagc actgggtgct aaatatgagc 541 acttgatgaa aacataacac tgactaaaca agatatttct ctgcggctga atttatctag 601 cgaaagtgtg aaattgttgt tgatttatgt tatactaagc acgccatata tatgaggtgg 661 cgaatttacg acgatttact aagattttaa tgtactcttc cttggttaga ggatagaaag 721 catgaaattg aatagcagtg caataaatcc gtactaattt ccattcgttt ttgcgtatta 781 tccaatatct taagggtcat tccccttgtg tgtatatata ggaacaaagt aagtttaaga 841 agctcattgc ggctttggaa aatgggcaac catcaagtaa cattcttagt actgtgcacg 901 tcgctcctct ttcaaaatac aatacaacaa aatgtatcat ttcaactgat aagggaaatc 961 gatagataca caccagagaa ttttgtacta tcagtgttga atatagaaat gattcttttt 1021 gagatccatg ccgctaaggc agttgaaagt aataacgatt tggaaaggag cttgatcata 1081 aactttggat actccgaagc aaggcaggaa gtactggatt ggggattgag atataagaaa 1141 gcctcgagcg ccaagttcca gatggccaac aaggtggcag tgtctcagaa actgccccta 1201 tcgcaaaagc tgcgtctggt aaacgaggtg ctgatgacga gcgccaagaa gtatgatgta 1261 acaaaggatg tcagaccatc aaaattaatg gatgaatggt tgtcctccca tttggatggt 1321 gtactcgcca attttgtaca agagaagaag ttaaacgcgg gcgaaaacat tgtagccatc 1381 agcggaatga cagtcactcc cctttgggca tctcatttcc aatcagagat taatagatac 1441 tttgtcaata atcctggcac tggatatgct tcgaaagacc caacatgtgt gcccatgatg 1501 cactcattgt cctcgtttga aaccatgtcc acggacgagg ccaaaggtat atacattcca 1561 ttctcatcgg caaacttggg tatgttgatc ctcctgccga ggaaaggtgt cacctgcaag 1621 gacattttgg ataatttaaa caaccagatc aatgtggaat ataatgatca caaggatgtt 1681 cacttgctac tgcccatatt caaggagaaa tttgactaca atattgccaa attctttaac 1741 ggaattaaca ttgaagacac gtttaaagat tcggcgttta aatcgaaagc caaaatcaaa 1801 atcaacaact tccgagtcaa ccatggcata cgatttcaac ccattctccg tttagaagta 1861 gttgatgata ttaatactgg aaagaccgaa acgtttgaag taaatcgccc atttgtcttt 1921 gtcataaagg ataaggttaa cgtatacgca gttggtcgaa ttgaaaacct agatggactt 1981 actgacaaag tgaattgctc caagaaatac gctgatctca agtcgtaaaa tatccataat 2041 atatttcgaa gcataataaa gcaagaaaat ata // LOCUS DMU91994 2632 bp DNA INV 13-DEC-1997 DEFINITION Drosophila melanogaster selenophosphate synthetase (ptuf1) gene, complete cds. ACCESSION U91994 NID g2411486 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2632) AUTHORS Alsina,B., Serras,F., Baguna,J. and Corominas,M. TITLE Patufet, the gene encoding the Drosophila melanogaster homologue of selenophosphate synthetase, is involved in imaginal disc morphogenesis JOURNAL Mol. Gen. Genet. (1997) In press REFERENCE 2 (bases 1 to 2632) AUTHORS Alsina,B., Serras,F., Baguna,J. and Corominas,M. TITLE Direct Submission JOURNAL Submitted (05-MAR-1997) Genetica, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, Barcelona 08071, Spain FEATURES Location/Qualifiers source 1..2632 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /chromosome="II" /map="50E" mRNA join(753..855,1230..2632) /gene="ptuf1" /product="selenophosphate synthetase" gene 753..2632 /gene="ptuf1" intron 856..1229 /gene="ptuf1" CDS 1242..2438 /gene="ptuf1" /standard_name="patufet" /function="synthesis of selenoproteins" /codon_start=1 /product="selenophosphate synthetase" /db_xref="PID:g2411487" /translation="MSYAADVLNSAHLELHGGGDAELRRPFDPTAHDLDASFRLTRFA DLKGRGCKVPQDVLSKLVSALQQDYSAQDQEPQFLNVAIPRIGIGLDCSVIPLRHGGL CLVQTTDFFYPIVDDPYMMGKIACANVLSDLYAMGVTDCDNMLMLLAVSTKMTEKERD VVIPLIMRGFKDSALEAGTTVTGGQSVVNPWCTIGGVASTICQPNEYIVPDNAVVGDV LVLTKPLGTQVAVNAHQWIDQPERWNRIKLVVSEKNVRKAYHRAMNSMARLNRVAARL MHKYNAHGATDITGFGLLGHAQTLAAHQKKDVSFVIHNLPVIAKMAAVAKACGNMFQL LQGHSAETSGGLLICLPREQAAAYCKDIEKQEGYQAWIIGIVEKGNKTARIIDKPRVI EVPAKD" BASE COUNT 655 a 673 c 633 g 671 t ORIGIN 1 aatgtagccg ccattatcgc tgcccttgca cacattcgca ggggtacaag gcctttgatc 61 tgatttgaaa aaaaaacacc atataagtga agaaatatgt aatatacaat atttggaata 121 actcactttt ttggacactt gaattcgggt tcgccataca catattccga actggctagg 181 gcaatgaagt gcagcaaaac gagagtgcgc aggcgtagct gaatcatgtt ttaatgattt 241 cgtcaccgtt ttaatttagt ttatcccatg gcccaaaacc aagttcgctg ctcaagtctt 301 ttgtgtgggc ttcgatttcc tgaaacttat agttctttgt ttaacgatgt tccgcttgaa 361 tgaggtgggt ttttttttgg gatgtggagt aaagttaact tgtcttatca acgaacaaag 421 gtaaatggtt tcttctactt ttacttttcg ctctgctggc gcaacaggtt ttcatgggcc 481 gctcttgtgc gctctttgtg accagcactt tggagctcta attgaattaa tgccaactat 541 attaactgct cccgaaagtc agagcactgt gaaccacagt ttccacttcg gttccccatt 601 tattccgcgg ttttaacata tttttattta ttttaccctt ggcgcacaat acaatcgata 661 gatttcgggc gagttggcag ccccgttgaa ccatcgcttc agacaatcgg catcccaaat 721 atcgaatcag ccgcacacgc taatacaacc ctgttgtgac atctcgctcg ttggaaaagc 781 aaaaaccagg cgcaaaataa atataatttg ctaacgttac tctacaatta tctttgtaca 841 atcgcacaag caaacgtaag taccaaaaga caaacgaacg caacgaacca aatggccaat 901 tcaaagcgcg cactttttgg cattttgcaa ttgaaatgag tgggcattgt tcacgttgct 961 cgcctcgtcg acagggagaa atactgactt cgcccgtttt agccgccatc gcgactgcag 1021 ccaatcacgg gccgcgctac acacacgcgg cagaaaatcc gtgtacatac acgtctgagc 1081 gctgtggtat tggtggccgg ggagaacgcg agttactcgc tgcatcgctg catagagtag 1141 cccactatgt gtttattgcg cggcaaaagt gcgttaatcg gttaaagccg ctacttacat 1201 tctgttcttt gcatctcccc catccacagc tataaagcaa gatgagctac gccgctgatg 1261 tgctgaactc ggcccatttg gagctccatg gtggtggcga cgccgagttg cgtcgtccat 1321 tcgatcccac ggcccatgat ttggatgcat ccttccgcct tacacgcttc gcagatctaa 1381 aggggcgcgg ctgcaaagtg ccgcaggatg tgctctccaa gctggtgtcc gccctgcagc 1441 aggactactc tgcccaggac caggaaccgc agtttctcaa cgtggccatt ccccgcatcg 1501 gtattggcct ggactgctcc gtcattccgc tgcgacacgg cggactctgc ctggtgcaga 1561 ccaccgactt cttctacccc attgtcgatg atccctacat gatgggcaaa attgcgtgcg 1621 ccaatgtgct cagcgatttg tatgccatgg gagtcacaga ttgcgataac atgctgatgc 1681 tgttggcggt cagtaccaag atgacagaga aggagcgtga cgtggtcatt ccgctgataa 1741 tgcgaggctt taaggactcc gctttggaag caggcaccac tgtgactgga ggccaaagcg 1801 tggtcaatcc gtggtgcacc attggtgggg ttgcctcgac catttgccag ccaaatgagt 1861 atattgtgcc agataatgcc gtggtagggg atgtactggt gctaaccaag ccactgggca 1921 cccaagtggc cgtgaatgcc caccagtgga ttgaccagcc ggagcgctgg aaccgcatta 1981 agctggtggt gtccgaaaaa aatgttcgca aggcctacca ccgggcgatg aactctatgg 2041 ctcgcctcaa ccgcgtagcc gctcgcctca tgcacaagta caatgcccac ggagccaccg 2101 atatcactgg attcggacta ctaggccacg ctcaaaccct ggctgcacat cagaaaaagg 2161 atgtctcctt tgttatccac aatctgccgg tgatcgccaa gatggctgca gtggccaaag 2221 cctgtggcaa catgttccag ctgctgcagg gccactcggc ggagacctcg ggaggattac 2281 tgatctgcct gccgcgagag caggccgctg cttattgcaa ggacatcgag aagcaggagg 2341 gctaccaggc ctggatcatc ggcatcgttg agaagggcaa taagaccgca cgcatcatcg 2401 acaagccccg cgtcattgag gtgcccgcca aggactaggt ctccattgcc tgaccatctg 2461 ctattgtcta ccttaagtat cttaatatta acgtaacggc tgctacattc agttgtaacc 2521 ggcatgatcg gtctttgttt tttataaaaa agcttatcaa ctacagattc actgatcatt 2581 ataattttgc acgtttttac tgcaatacga gtgaataaaa tgaaaacact tg // LOCUS DMU92867 3807 bp DNA INV 14-AUG-1997 DEFINITION Drosophila melanogaster bZIP transcription factor (vrille) gene, complete cds. ACCESSION U92867 NID g2326191 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3807) AUTHORS George,H. and Terracol,R. TITLE The vrille gene of Drosophila is a maternal enhancer of decapentaplegic and encodes a new member of the bZIP family of transcription factors JOURNAL Genetics 146 (4), 1345-1363 (1997) MEDLINE 97403310 REFERENCE 2 (bases 1 to 3807) AUTHORS George,H. and Terracol,R. TITLE Direct Submission JOURNAL Submitted (11-MAR-1997) Institut Jacques Monod, 2 Place Jussieu Tour 43, 75251 Paris Cedex 05, France FEATURES Location/Qualifiers source 1..3807 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /dev_stage="embryo" /chromosome="2" /map="25D" gene 1..3807 /gene="vrille" CDS 318..2507 /gene="vrille" /codon_start=1 /product="bZIP transcription factor" /db_xref="PID:g2326192" /translation="MSIVCTLEQKVNFFKAAATTKNLLILKNNTDTNYINNYKQDNPS NNKFPRIQAQSNNSHLQHQQQLQQKLAQLHHYSQQKLSGSDFPYGPRPPTGGKEEKLL LLAPPGKLYPEASVSTAMPEVLSGTPTNSHNKANIAMMNNVRLSNISPTLSMNGSSNE ASNLHPLSMYGGSISPQSNDSGMSDSLGKYVPGSGYGDGMMAQSPSQGGNGPQSALTA AQKELFSQRKQREFTPDNKKDESYWDRRRRNNEAAKRSREKRRYNDMVLEQRVIELTK ENHVLKAQLDAIRDKFNISGENLVSVEKILASLPTSEQVLSNTKRAKMSGSGGSSSGS SPSGSGSGEGSPQGGHNGYPVGPPLSPLIYGPNGNARPEATVKSVHHIHHAGVAPPPT HLQQLVVPQSQTQHLYQPQPQQHQPHQQQQISQPPQQQQQQQEPSPSAGSSSPVISDP HNRPPSTTIANLQVQLQQALNRNVRPEDLDSLRKVVAAGALYNAARVVGAPPPPPSAG LYVPAPSAYKDHLEAAAAWSHNVEAAVSSSAVDAVSSSSVSGSAASVLNLSRRACSPS YEHMLSSTTSSTLSSASSSGAVSGDDEQEHEPAHMAPLQLQRTSPQQGSDANNCLPLK LRHKSHLGDKDAAATALLSLQHIKQEPNCSRASPPAWNDGGDNSSDERDSGISIASAE WTAQLQRKLLAPKEANVVTSAERDQMLKSQLERLESEVASIKMILAE" BASE COUNT 1097 a 1006 c 896 g 808 t ORIGIN 1 aattgcgatt cagccttctt tcgaagcggt tcaggcgctc gcgataagtc tctagactat 61 actaccaaac catataatat acagccgatc gggttcacaa ccgcgataag caagtgagag 121 ccgtcggtcg agccgttaaa agcatttcgg ccaagtgcat caagcgcaga aacgtcgcgt 181 tacgcaacta aatcggtcaa attggttaaa ccccgaactg cacaagtgtt tgaaaaacaa 241 ttttcaaaag atttggataa tatctgcaag cgcacacaaa aacaatgcca atttgttcgt 301 tctaacaaca aaacattatg tcgattgtct gcacgctgga acagaaagtg aactttttca 361 aagcggctgc aacgaccaaa aatctgttga tactcaaaaa caatacggat acgaattaca 421 tcaataacta caagcaggat aatcccagca acaataaatt tccccgcatc caagctcaaa 481 gcaacaacag ccatctgcaa caccagcagc aactgcagca gaaactagcg cagctgcatc 541 actacagcca gcagaagctg agcggcagcg actttcccta cgggccacgc ccccccaccg 601 gaggcaaaga ggagaagctg ctcctgctag cgccgccggg caaactctat ccggaggcgt 661 ctgtgtccac agcaatgccc gaggtcctca gcggcacgcc caccaacagc cacaacaaag 721 ccaacatcgc catgatgaac aacgtccggc tatccaatat atcgccgact ctctcgatga 781 acggcagctc caacgaggct tctaacttgc atccgttgtc catgtacgga ggatccataa 841 gtccgcagtc aaatgacagc ggcatgtccg acagtctggg caaatatgtc ccgggaagcg 901 gctatggaga tggaatgatg gcccagtcgc cctcacaggg tggcaatgga ccgcagtcgg 961 cgttgaccgc cgcccagaaa gagctcttct cgcagcgaaa gcaacgcgaa ttcaccccgg 1021 acaacaagaa ggacgagagc tactgggatc gccggagaag gaacaacgag gcggccaagc 1081 ggagtcgaga gaagaggcgc tacaatgaca tggttctgga gcagcgcgtc atcgagctga 1141 ccaaagagaa ccatgtgctg aaggcccagc tggacgccat acgcgacaag ttcaacatct 1201 ccggcgagaa tctggtgagc gtggagaaga tcctcgcctc gctgcccacc agcgaacagg 1261 tgctgagtaa cacaaagcgc gccaagatga gcggcagtgg tggctcctcc tcgggctcct 1321 cgccctcggg cagtggatcg ggcgagggat cgcctcaagg tggccacaat ggctatccgg 1381 tgggtccacc actatctcca ctgatctacg gacccaatgg caatgcccgg ccagaggcca 1441 cggttaagag tgtccaccac atacatcatg cgggtgttgc gccgccacca acgcacctac 1501 aacagttggt tgtgccccag tcccagacac agcatctcta ccagccacag ccgcagcagc 1561 atcagccgca tcagcagcag cagatttccc agccaccgca gcaacaacag cagcagcagg 1621 agccaagtcc cagtgccggc tccagttcgc cagtcatctc cgatccgcac aaccgcccgc 1681 caagcaccac cattgccaat ctccaggtgc aactgcagca ggcactaaac cgcaatgtca 1741 ggcccgagga tctggacagc ttgcgcaagg tggtggccgc cggcgctcta tacaatgcgg 1801 cacgcgtggt gggagcacca ccaccgccac catctgctgg tctctacgtg cccgctccca 1861 gcgcctataa ggatcacctg gaagcggctg cagcctggag ccacaatgtc gaggctgctg 1921 tgagcagcag tgctgtggat gcggtcagta gctcatcggt gtccggcagt gcggccagtg 1981 tgctgaatct atcgcgtcgg gcctgctcac ccagctacga gcacatgctc tcctccacca 2041 cctcctccac tctttcctcg gcctcctcat cgggagctgt ttccggcgat gatgagcagg 2101 agcacgaacc agcgcacatg gctccactgc agctgcagcg aacgagtccg cagcagggca 2161 gcgatgccaa caactgtctg cccctcaagc tgcgccacaa gtcccatctc ggcgacaagg 2221 atgcggcggc cacggcgcta ctctcactgc agcacatcaa gcaggagccc aactgcagtc 2281 gggcatcgcc gccggcttgg aacgatggcg gcgacaattc cagcgacgaa agggactccg 2341 gcatctccat cgccagtgcg gagtggacgg cgcagctgca gaggaagcta ctggcgccca 2401 aggaggccaa tgtggtaacc agtgccgagc gcgatcaaat gctcaagtcg cagctggagc 2461 gcctagagtc cgaggtggcc agcatcaaga tgatcttggc ggagtaagca agcccctgtc 2521 caagctggac aggatcacga ctaggcggat caggagagag agcgaagaga cagaggctct 2581 gaagggatca gagtcggggg agcagagcag tagatggcaa agcagagagt tccatggcgc 2641 cagtagttct cctggacaaa gaagttggtt taagcatatg ttagtagaga tgtccaaaac 2701 cgagtgataa ctattagata ccgatgcatg catgtctcca tctctatgta gaactctagg 2761 gccaggtctg gaccacaagg atttgacaca agaccctgtg gcccgaaact ggccaacact 2821 tatctgtgtg tatgtttatc tatccactgt attgagtctt gtaatcgtga atgtttaact 2881 atatagatct cgtcaactcg gagctaaaaa aaaatcctta gggtcagccc aaaagaattt 2941 ctaatttaac ctgtttgttg tatacacaca agctatttgt ttgcatagct agctggtgac 3001 ctgcgatgag catcggggtc accagccacg ttattgttct cttatgcatc ccaagtttcc 3061 ttatgcacag cgaaagtgga gaagataaag aattattatg tttgtaagca aacgttacaa 3121 agtatttgct gttgtacata ttacacaatt aattatatat actatataac tatacagata 3181 tctatattcc tatcatgtac ataattttag ttgcaagcta agcttatttt attttatttt 3241 attttacttt gtattgagta ctattattat tattattatt atgtagtgaa acaaacatat 3301 acattacact taagaaacgc gtgaagcaca ttcaaaacgt gagagatgaa agaaatctga 3361 aaagaattga tgaataaatt ctgcaataaa taattttaaa tatcctccta ccttaatgtt 3421 tgtcgttcgc catttattta tgttttttgc cgcttcggtc acccgtgtgg ctcacagcgc 3481 ttcaactaaa tgttatcgaa gtttataaaa ctttagaaac aaaactaaaa aagaactcta 3541 agccacacaa aaaacacaca ttttatttgt agaccatcta gctgagtaga tcgatcgttt 3601 ggtgtcgtaa ttcgagcatt cacttttaaa gctgtattac actttacaaa taatcgcagt 3661 ggagcacaca agaaaataca tatgactact actatataca tacagcccta tctatatgca 3721 tattaaaata actcgtttgt gttgatcaat gaaaataaac tatttataat aatgaaacaa 3781 accaaaaaaa aaaaaaaaaa aaaaaaa // LOCUS DMUBEX 2699 bp DNA INV 16-NOV-1993 DEFINITION D.melanogaster gene for ubiquitin extension protein. ACCESSION X59943 S45089 NID g8784 KEYWORDS ubiquitin extension protein. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2312) AUTHORS Barrio,R. TITLE Direct Submission JOURNAL Submitted (04-JUN-1991) R. Barrio, Departamento Autonoma de, Biologia Molecolare, Universidad Autonoma de Madrid, Cantoblanco, 28049 Madrid, SPAIN REMARK revised by [3] REFERENCE 2 (bases 1 to 2312) AUTHORS Cabrera,H.L., Barrio,R. and Arribas,C. TITLE Structure and expression of the Drosophila ubiquitin-52-amino-acid fusion-protein gene JOURNAL Biochem. J. 286 (Pt 1), 281-288 (1992) MEDLINE 92392292 REFERENCE 3 (bases 1 to 2699) AUTHORS Barrio,R. TITLE Direct Submission JOURNAL Submitted (06-NOV-1992) R. Barrio, Departamento Autonoma de, Biologia Molecolare, Universidad Autonoma de Madrid, Cantoblanco, 28049 Madrid, SPAIN FEATURES Location/Qualifiers source 1..2699 /organism="Drosophila melanogaster" /strain="Canton-S" /db_xref="taxon:7227" /dev_stage="adult" /clone_lib="Clonetech" /chromosome="97A chromosome 3R" misc_feature 1322..1332 /note="GC box" misc_feature 1336..1357 /note="CT box" intron 1387..1648 CDS 1662..2048 /gene="Ubi-f52" /codon_start=1 /product="ubiquitin extension protein" /db_xref="PID:g8785" /db_xref="FLYBASE:FBgn0003941" /db_xref="SWISS-PROT:P02248" /db_xref="SWISS-PROT:P18101" /translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYAR LHPRATNCRKKKCGHTNNLRPKKKLK" misc_feature 1662..1889 /gene="Ubi-f52" /note="ubiquitin region" /db_xref="FlyBase:FBgn0003941" gene 1662..2048 /note="Ubiquitin fusion 52" /gene="Ubi-f52" /allele="" /db_xref="FlyBase:FBgn0003941" misc_feature 1890..2048 /gene="Ubi-f52" /note="ribosomal region" /db_xref="FlyBase:FBgn0003941" BASE COUNT 731 a 588 c 587 g 793 t ORIGIN 1 aagcttcaaa ctgtgcgtgt aaatgccatc tccgttgacg cccgacgtcc aatcgccata 61 ggtgaggtcc ttctgtagcc agaggagatt cgccttttgc tggaagttaa ccacatcggg 121 attctccgac aaccacacgt gcaggtcaaa gtccgtgccg ttctcgaagt aattccaggc 181 cgtgatcttg ggacccgcat tagcacactt ttgccttgac tggcggcatc gggcgcaggt 241 cgtcggaaaa aggagctcac aaagtagatg atcagggcac gcaggatgag ggactttgtc 301 atcgcaaaga aggactccat gcgggtgggc tgattcggcg ggggttgatt gattgactca 361 ttctggcctt cattttgggc cagctcagcg attaccattg cccgcaatca cctagaaaaa 421 acgatgagaa ccaggtcgct attgtcaggt gattggggtt gagaaaggtt taagtttctc 481 agatactacc gcaccctctg ctgcgggctg atctcgcctg cttcgacatg ctctgttctc 541 aagggttttc cacgcttttc ccttagtttc ccgttttccg cacaacttgt gctactgtca 601 tcgataggta agtgttgagg acctatcgag ccattagaac ttcgatatcg aaaggggtat 661 ttttcagaat ctatcgattt gacgcagaat ggaaaagcac ggtgttctca ctataaagac 721 atactttttt cactaagtca aatacaaatt tatttatata tgtgacatat ttagcaatac 781 acatttttag aatatcgttg gcttaaatgt atatccctta cttacttata cttacttact 841 tacttatact tatacaacct agtattcaat tattgttctt agtaaaatgg acagcaactt 901 gaatattttt gtataaattc aaaaggttta atatctgaaa aaatatttca taaattcatt 961 aaaaatataa tttaaatcga ttaggcggaa aaacaataaa aaaaaatatg cgtaatatgt 1021 aatatttaac cttatctaaa atataattct atatacaagt tttgatttca atttatttgt 1081 atacatgcaa atagcatttt catgccataa taatataatt ttgaattagc ttagctatca 1141 gtgaggtagc gttgggctat aaaaaacacg aaaaactata tgttgatatt gtaaagttgg 1201 tctcggttca aatggtaaag atattttgca ttaattaatt tgagtgtctg aatatttttt 1261 acagttccat ttagaatgtt ttggtattta aaaaatagta ttttggtata tttgcagtgc 1321 tcggcggcgg ccacactctc ttttcccttt ttcttttgaa tagcatttgg ttgcacgttt 1381 cctctggtga gtttccatta aatatattaa aaataaacga aaaatcgcaa taacgtggca 1441 gaatgtaaac atattgttgt ttagtgacgt atttgtgata tgaaaaagat ggacactggt 1501 gcttgtcgac cggtggagct gtttctgtcg aacgaaacat gccagcaagt cggacctaac 1561 ctccaatctt tgcccgctct ttgggacgca caagttcgct aagaaatcgt acgatttggt 1621 actgatttat gttttatatt gctttcagtg acgccgccat tatgcagatc ttcgtgaaaa 1681 ccctcaccgg caagaccatc accttggagg tggagccttc tgacaccatc gagaatgtca 1741 aggctaagat ccaggataag gagggcattc ccccagatca gcagcgtctg atcttcgccg 1801 gcaagcagct ggaggatggc cgcactctgt ccgactacaa cattcagaag gagtccacac 1861 tgcacttggt actccgcctg cgtggtggta tcattgagcc ctcgctcagg attctggccc 1921 agaagtacaa ctgcgacaag atgatctgcc gcaagtgcta cgcccgtctg catcctcgtg 1981 ccaccaactg ccgcaagaag aagtgcggac acaccaacaa cctgcgcccc aagaagaagt 2041 tgaagtagac tatgatcatc cgtcgacggt ccaggctggt ctttctatcg acaaaaccat 2101 ggttaaccat ctaagtaaat atatgtacat tttgtgaaac cacatctaat cgaaatgtat 2161 tgcatttgct gccaaggcac agcctattta caccgtgtat gtttctgttt tcctgtcatc 2221 tgttttcgtt tgtggtctcc gaagaacgag tttctgcggt tttaggaagc tcttatactg 2281 caattagttg gcctctccga gatctcagtt agtttttctg ctctgtttct ggttctgtct 2341 cgccaccagg aaagcgggcg acacgagcag gtaattgata ttccatctgc cagcgatacc 2401 agacccttgc ggtctactct tctgcccaag ggaaacaagg ggactggctg gctagtacgc 2461 cgcggatggt cgagcagacc tacttggcca agctaagcca agtccacttc gagtacagtt 2521 aattggtttc attgaccgcc gactaaggcg cgcaacggct tccgtggcca actggtaaac 2581 tggttgttgg cgctctaatc catgctagca cttggtcgtt ggcccgcgga ggctcttatt 2641 atgaatatct taataaccca agaactggct ggtgacgacc aaagaactga taggcagaa // LOCUS DMY16065 3507 bp DNA INV 06-JAN-1998 DEFINITION Drosophila melanogaster a6 gene. ACCESSION Y16065 NID g2760528 KEYWORDS a6 gene. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3507) AUTHORS Makunin,I. JOURNAL Unpublished REFERENCE 2 (bases 1 to 3507) AUTHORS Makunin,I.V. TITLE Direct Submission JOURNAL Submitted (30-DEC-1997) I.V. Makunin, Institute of Cytology and Genetics, Lavrentieva Ave, 10, Novosibirsk 630090, RUSSIA FEATURES Location/Qualifiers source 1..3507 /organism="Drosophila melanogaster" /strain="Oregon RC" /db_xref="taxon:7227" /chromosome="X-chromosome, 2B6 - 2B7-8" /dev_stage="adult" /clone="Dm1487" mRNA join(<97..397,464..>2325) /gene="a6" exon 97..397 /gene="a6" /number=1 gene 97..2325 /gene="a6" intron 398..463 /gene="a6" /number=1 exon 464..2325 /gene="a6" /number=2 CDS 465..1694 /gene="a6" /codon_start=1 /db_xref="PID:e1226435" /db_xref="PID:g2760529" /translation="MNQKHSEPFYISPRLFDNRRLKRRRCRWMERLLEHQRICMARMR DQVALASKTDRQLSHLQRRHVASTLQPDVTIDLLSDDDETPSAGQPAAAGHNRLLIPA PGHRAHRTGRRQAPRRAATHSYPVTDSILITSDDEHNEQEPSSTARVRSQLSMRSPPP LAPLTQSETIEEVTVSLVPRTSTTANCLTRVSGHPKPCRASTAASNGFATAEGGEGGN ETGCFLEVDVGGGITATLPDETTVHTVIANRIYELSLSKLREGLAFSGVPEYTNDLMP EQLQKLSPALRAKVAPLVAPSPPTPISLKLSSDLSISLISDEDDCESTGPHVNGGVGT EPVHPVVVAAAEAHAAAKLLKQQQPQLSVVQHLQYVGGGLAAPVALALPVMAANPTSS ASVVALPLQLPRRRKLG" BASE COUNT 857 a 1021 c 909 g 717 t 3 others ORIGIN 1 gtcgacgtgc acggttgcac gcagcgtgga ctatcgagag aagcgttatc gatgtgtggt 61 cgcttatcga tgcagtttta taaacagaac tctaaagtac aacaaaagca caaattaagc 121 agctgccgcg cgaaaaaaca accatctcgg ccccgctcgc atctcggcat gtccagcggc 181 gggaggcgca gcgcctagtc ccgcgcctcc gctcctctca aggaaatccc cctgcgccgc 241 cacgcaatta tgcaagttgc agcagtggat ctaactgtac tcgccgccag tggaacagca 301 agaggaggag gaggaggagc cccacgggcc cgagcccatg acccttgaca acccgtggca 361 ggcaccgcca ccgctagaag acgagtccac acactcggta aataggtgcc caccagtggc 421 cgaccaggcg tcacagacta actcttctcc tgccgcctat agacatgaac cagaaacatt 481 ccgaaccatt ctacatatcg ccccggctgt tcgacaaccg tcgtctcaag cggcgccgct 541 gtcggtggat ggaacgcctg cttgagcacc agcggatctg catggcccgg atgcgcgacc 601 aagtggctct cgcctccaag actgaccggc agctgtccca tctgcagcgg cgccatgtcg 661 cctccacttt gcagccggac gtgaccatcg acctgctgtc ggatgacgat gagaccccat 721 cggccggaca gcccgctgca gctggccaca atcgcctcct gattcctgcc ccagggcacc 781 gagcacatag aacgggcaga aggcaggcgc cgcgcagagc tgccacccac tcatacccag 841 tgaccgacag catcctgata accagcgatg acgagcacaa cgagcaggaa cccagcagca 901 cggcaagagt gcgctcccag ctctccatgc gctcaccgcc accgctcgca ccgctcacac 961 agtcggagac catcgaagag gtaactgttt cgttggtgcc gcgcacctcc accactgcca 1021 actgcctgac gcgggtgtca ggtcacccca agccgtgtcg agcgtcgacg gcggccagca 1081 atggattcgc caccgccgaa ggcggagagg gcggcaatga aacgggctgt tttctggagg 1141 tggacgtggg cggaggcatc acagccacgc tgccggacga gacgaccgtt cacacggtca 1201 tcgcaaaccg tatttacgaa ctctcgctga gcaaactacg cgaaggcctg gcttttagtg 1261 gagtgccgga atacacgaac gacctgatgc cggagcagct gcagaaactg tcaccggcat 1321 tgcgcgccaa agtggcgccc ttggtggctc cctcgccgcc cacgcccatc tccctaaaac 1381 tgtccagcga cctcagcata tcactgatct cagacgaaga cgattgcgaa agcaccggtc 1441 cacatgtcaa cggaggagtc ggcaccgaac cggtgcaccc cgtcgtggtg gctgcggcgg 1501 aggcacacgc tgccgccaag ctgctcaagc agcagcagcc acagctctcg gtggtgcagc 1561 atctgcagta cgtcggcggc ggactcgcag ctccagtggc tcttgccctt ccggtgatgg 1621 cagcaaatcc gacctcgtct gcttccgttg ttgccttgcc gctgcagctg ccgcggcgcc 1681 gaaaactggg atgagctgga tgactgatga ccgatgaccc gccagaaccg agtccccatc 1741 gccataatat cattccccga gccggaagca cggcatagac tttaactagc agtggctaga 1801 agtgcaaata tgaacgtagg tttagcgaca acacatcact atttcccagt tatccttgaa 1861 tccaggacta gtccttgtcc ggtcgatttt tgtatccttc ccctttccca agcaccttct 1921 ctccatctca ctcagttgcc cattaatctc cctgtctctg tcattctcat attttaagct 1981 ttaaatgaaa cgagacgaca acgtacaaat gaaagtagaa aagcatcaac ccatatacat 2041 tgttgagcaa aaaacacaaa tttcaaaaga ttataagagg gagtagaaaa tttgaagcga 2101 gtgagaaagg tgagcccaat atttataaag tacaagtagc tagcttaaga tatactatgt 2161 atatgtacat ttgatttagt gtatcatata ttacatggct gaatcacgtc gtgtaatccg 2221 tcgcagtccg ccgtctgtat tacattagct gatcaccaaa ccggaataaa ttttcattgt 2281 atatatatat atatatacat gtacaccagc tgtgagaaaa ggaaactatg cgtatgccat 2341 caaggttcgt ttcgaccaag cgctccttga accacgactg atctctggcc aggatttcgt 2401 gggtgaactc gtatcgcgct agggcactct taatatagag cgagagttgc ggcaggagca 2461 gatcctcaga gtggctgaca aagtcatggg atccttggtc acgcgcttca gtcgctgagc 2521 atgctaatgc ccgcagtggt gttgccgcaa aactgtcgaa tacaatcgta aatgaaaatg 2581 aaatcgagtt gcatcttctg tggccaaact cactcgagtg ttgtccacgt gcggcttgat 2641 cgcgccagag tcagccaagt ccaggatgtg cacgaagggc atgacctgct caccgaaggg 2701 aaactcacga gacgtgatcc ancgtggcct ggttttgggg antccacttt cggcgttcaa 2761 cttcgcggta tctgcctgcg aagtttaaga agtttagcca gaaatccgat actatatagt 2821 atatatatat acccacccac gtcatcacag tggctcaact cgtacggcaa gcggctgatg 2881 tgaggctcga tttcccgcat cagtagttgc tcctccttcg cagtgatgaa gtccctgatg 2941 acccgcatgt ccgattcaaa ctggtgctgc tcacagcgag gccactggcc gggaaactcc 3001 accagggcgt ggctgcgggc ccasacatcc gctgggatcc tggctactcc cggataaaca 3061 agccggcgca ggacaagcat gtgtttcgtc acctgttttt aaaggccttc cgcccagtaa 3121 tcgattggag ccattcgata gccacatgcg ctcaaccgcc aagaaaatta ctcgattgcc 3181 ccggcaccag gtaaacacac acaacagagc agcgtcggaa tgcagggatg ccaggacctc 3241 tgacggctgg atgccaggga acttcgctgg tccgggaaca ctcgattggt aacgcatgcg 3301 ccgttcaagc acgcagtcct cgttcggcta gggcggaaac gctttccggt gtagatatac 3361 cagaaatatt tctgctcttc tggcgttatg ctgcgtcggt ggacgagtgc cgtgtcctga 3421 ctccagaaag ctgtgtagtg acgagtgcaa agcgaagcga attgaatcga atctttatcc 3481 taaggacacg gctaaatcgg tgagctc // LOCUS DRO60AP 2146 bp DNA INV 02-JUN-1994 DEFINITION Drosophila transforming growth factor B-like protein gene (60A), complete cds. ACCESSION M77012 NID g156727 KEYWORDS transforming growth factor-beta. SOURCE Drosophila melanogaster DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2146) AUTHORS Wharton,K.A. TITLE Drosophila 60A gene, a transforming growth factor B family member, is closely related to human bone morphogenetic proteins JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1991) In press REFERENCE 2 (sites) AUTHORS Wharton,K.A., Thomsen,G.H. and Gelbart,W.M. TITLE Drosophila 60A gene,, another transforming growth factor beta family member, is closely related to human bone morphogenetic proteins JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 9214-9218 (1991) MEDLINE 92021021 FEATURES Location/Qualifiers source 1..2146 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 36..1900 /note="Transforming growth factor &bgr; at 60A" /gene="Tgf&bgr;-60A" /allele="" /db_xref="FlyBase:FBgn0004788" TATA_signal 36..40 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" mRNA 234..1900 /partial /gene="Tgf-60A" /standard_name="'cDNA16'" /db_xref="FlyBase:FBgn0004788" CDS 406..1773 /gene="Tgf-60A" /note="'precursor TGF-B-like protein from 60A gene'; Potential glycosylation sites are located at positions 421-429, 1117-1125, and 1153-1161." /codon_start=1 /db_xref="PID:g156728" /translation="MSGLRNTSEAVAVLASLGLGMVLLMFVATTPPAVEATQSGIYID NGKDQTIMHRVLSEDDKLDVSYEILEFLGIAERPTHLSSHQLSLRKSAPKFLLDVYHR ITAEEGLSDQDEDDDYERGHRSRRSADLEEDEGEQQKNFITDLDKRAIDESDIIMTFL NKRHHNVDELRHEHGRRLWFDVSNVPNDNYLVMAELRIYQNANEGKWLTANREFTITV YAIGTGTLGQHTMEPLSSVNTTGDYVGWLELNVTEGLHEWLVKSKDNHGIYIGAHAVN RPDREVKLDDIGLIHRKVDDEFQPFMIGFFRGPELIKATAHSSHHRSKRSASHPRKRK KSVSPNNVPLLEPMESTRSCQMQTLYIDFKDLGWHDWIIAPEGYGAFYCSGECNFPLN AHMNATNHAIVQTLVHLLEPKKVPKPCCAPTRLGALPVLYHLNDENVNLKKYRNMIVK SCGCH" sig_peptide 406..480 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" misc_feature 1396..1410 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" /function="putative proteolytic cleavage site" mat_peptide 1411..1770 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" polyA_signal 1875..1880 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" polyA_site 1900 /gene="Tgf-60A" /db_xref="FlyBase:FBgn0004788" BASE COUNT 578 a 578 c 532 g 458 t ORIGIN chromosome 2L. 1 gtttaaaata tcaaaatatt acgaactttg ccaatataaa cgttatattt tctacattta 61 cacagtttct tctttttttt tttgaagcta ttaaaccaca tatttgctca cgatcgcagc 121 tgaaatgaac tactatgttg gatcttctag ttcgatcttc aagaccgatt cattttccaa 181 gtcgcgggac tgccaactcc cgcgaaatag aaagaaaatg catcttgaag attaagatac 241 acacaacaat ccgtaagtgc gtcagaattt tcagaacccg cggttcgctg gaactctcga 301 aataaacaac taaatgccac tgtacatctg aagctatcgc aagtggatag cgccgtagat 361 atagaaaaac agcgatcgca accgatccgt ccaaaacacg aaataatgtc gggactgcga 421 aacacctcgg aggccgttgc agtgctcgcc tccctgggac tcggaatggt tctgctcatg 481 ttcgtggcga ccacgccgcc ggccgttgag gccacccagt cggggattta catagacaac 541 ggcaaggacc agacgatcat gcacagagtg ctgagcgagg acgacaagct ggacgtctcg 601 tacgagatcc tcgagttcct gggcatcgcc gaacggccga cgcacctgag cagccaccag 661 ttgtcgctga ggaagtcggc tcccaagttc ctgctggacg tctaccaccg catcacggcg 721 gaggagggtc tcagcgatca ggatgaggac gacgactacg aacgcggcca tcggtccagg 781 aggagcgccg acctcgagga ggatgagggc gagcagcaga agaacttcat caccgacctg 841 gacaagcggg ccatcgacga gagcgacatc atcatgacct tcctgaacaa gcgccaccac 901 aatgtggacg aactgcgtca cgagcacggc cgtcgcctgt ggttcgacgt ctccaacgtg 961 cccaacgaca actacctggt gatggccgag ctgcgcatct atcagaacgc caacgagggc 1021 aagtggctga ccgccaacag ggagttcacc atcacggtat acgccattgg caccggcacg 1081 ctgggccagc acaccatgga gccgctgtcc tcggtgaaca ccaccgggga ctacgtgggc 1141 tggttggagc tcaacgtgac cgagggcctg cacgagtggc tggtcaagtc gaaggacaat 1201 catggcatct acattggagc acacgctgtc aaccgacccg accgcgaggt gaagctggac 1261 gacattggac tgatccaccg caaggtggac gacgagttcc agcccttcat gatcggcttc 1321 ttccgcggac cggagctgat caaggcgacg gcccacagca gccaccacag gagcaagcga 1381 agcgccagcc atccacgcaa gcgcaagaag tcggtgtcgc ccaacaacgt gccgctgctg 1441 gaaccgatgg agagcacgcg cagctgccag atgcagaccc tgtacataga cttcaaggat 1501 ctgggctggc atgactggat catcgcacca gagggctatg gcgccttcta ctgcagcggc 1561 gagtgcaatt tcccgctcaa tgcgcacatg aacgccacga accatgcgat cgtccagacc 1621 ctggtccacc tgctggagcc caagaaggtg cccaagccct gctgcgctcc gaccaggctg 1681 ggagcactac ccgttctgta ccacctgaac gacgagaatg tgaacctgaa aaagtataga 1741 aacatgattg tgaaatcctg cgggtgccat tgaattcaat ttaccactta ggctaagcac 1801 tatagcacta tatatataaa gcatttctgt gtagatgtcc atctctgtac taatctcgaa 1861 tatttttata caaaaatata cagcgctgta cctaactgaa gttcgtctct tgaggagttt 1921 catttgtggc tagtattaaa agatacttct tctttattgt ctcacatcta ctcatgattg 1981 ggatgcacaa atttcaaata tttcaaaaca acgatgatag acgcaatgtg gtactaaaag 2041 tacgtatttt gattctggtt agctctcatt taaaattaac agtcatttca cagcaataaa 2101 aggcacaatc aagtctattt ggacttcggc acgcttcttt ggatca // LOCUS DROACS1 2233 bp DNA INV 30-SEP-1988 DEFINITION D.melanogaster achaete gene encoding nerve differentiation, complete cds. ACCESSION M17120 NID g156744 KEYWORDS nerve differentiation; neurogenesis. SEGMENT 1 of 2 SOURCE D.melanogaster (strain Canton-S, adult male) DNA, clone 2RR101. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2233) AUTHORS Villares,R. and Cabrera,C.V. TITLE The achaete-achaete gene complex of D. melanogaster: Conserved domains in a subset of genes required for neurogenesis and their homology to myc JOURNAL Cell 50, 415-424 (1987) MEDLINE 87273503 COMMENT Draft entry and computer-readable sequence for [1] kindly provided by R.Villares, 24-SEP-1988. FEATURES Location/Qualifiers source 1..2233 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2233 /note="achaete" /gene="ac" /allele="" /db_xref="FlyBase:FBgn0000022" mRNA 878..>1838 /gene="ac" /note="achaete mRNA (alt.)" /db_xref="FlyBase:FBgn0000022" mRNA 878..>1827 /gene="ac" /note="achaete mRNA (alt.)" /db_xref="FlyBase:FBgn0000022" CDS 941..1546 /gene="ac" /note="achaete protein" /codon_start=1 /db_xref="FlyBase:FBgn0000022" /db_xref="PID:g156747" /translation="MALGSENHSVFNDDEESSSAFNGPSVIRRNARERNRVKQVNNGF SQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVLHENDQQKQ KQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGAT PPNNFHTKLEASFEDYRNNSCSSGTEDEDILDYISLWQDDL" variation 1128 /gene="ac" /note="g in DNA; a in cDNA" /db_xref="FlyBase:FBgn0000022" variation 1167 /gene="ac" /note="a in DNA; g in cDNA" /db_xref="FlyBase:FBgn0000022" BASE COUNT 723 a 448 c 448 g 614 t ORIGIN 1 bp upstream of EcoRI site; chromosome 1B1/2-1B4/4. 1 gaattctgaa ataatgggac ctcctaaatg ctttcaaaat gctttcggct gagaggaaca 61 actgatacgt tgggcataaa ggccccgggg cattagaagt gttaatagaa aagtcctccg 121 gctgatcagg tttcgttgca ggaccgaatg gatcgccgcc tgaggtgttg atgagctggc 181 cttgaaaatt cctacgactt tggagtcgag cgacaatggt ctagtgttta agataatgtc 241 cgaatgatcc agggatcgga aggtcatcag tacataaaat aaattaaatt aaatgtatta 301 acataaaatt aaagattttt taaaagtcta aaatacctag ccttgttaat taaagattat 361 tttttcgtaa acacttttgg tagtgtataa attgtaaatg tccccatttt tataattgta 421 atgacagtct attccactaa ttttgttgta ttttgttagt tataaaaatt ggatggccac 481 tttcaatagg agatacagct ttttacttcg gaggtgtttt tacttggctc tgatgtctgg 541 accttgttgc ctttttaaac cggttggcag ccggcacgcg acagggccag gttttcgttt 601 ggggacgaca ggcagctgaa aatgaacaaa aacactcaga aactcttccc actcgacaac 661 gggaacactc aggtcaccaa cagctgcgtt ttacagagag aacgagagat aatattacta 721 cctctctatt aaaatcagag aaaacactca tctcaagaga cgatccttca gtgatgatgc 781 tgttgcacct tttccagggg caggtaggta gtcacgcagg tgggatccct aggccctgat 841 acctataaat agcctgaacg gaacggggaa gggcatcaga acagagccag cgctgaagca 901 aggagcatcg tcacacaata acgttatact atctcttaaa atggctttgg gcagcgaaaa 961 tcactctgtt ttcaacgacg acgaggagtc atcttcggcc tttaatggac cctctgttat 1021 ccggagaaat gcccgggaac gcaaccgcgt aaagcaggtc aacaatggct tcagccaact 1081 acgacaacat atccctgcgg ccgtaatagc cgatttaagc aatggtcgcc ggggaattgg 1141 tcccggcgcc aataaaaaac tgagcaaagt tagcacactg aaaatggcag tagagtacat 1201 acggcgcttg cagaaagttc ttcatgaaaa cgaccagcag aaacagaaac agttgcattt 1261 gcagcagcaa catttgcact ttcagcagca gcaacagcat caacacttat acgcctggca 1321 ccaagagttg cagttgcaat ctccaactgg cagcacaagt tcctgcaaca gcattagctc 1381 ttattgcaag ccagcaacat cgacgattcc gggagcaaca cctcctaaca attttcatac 1441 caagttggaa gccagttttg aagactaccg taacaattcc tgcagttctg gtactgaaga 1501 tgaggacatc ctcgactata tatcactctg gcaggacgac ctgtaaaaaa acagatcaaa 1561 tcttcagcta ttgctagtcg cacccaacca taacacacat caaaccattg attggccaac 1621 aagtattacc tcagccacaa agtatttata ttccctagaa ctaccttttt gccttataaa 1681 ttagtattta aggttttata tagtttctaa ggatagtttc taatggaaga caatttatat 1741 ttaagttttt ttttatagca tacattcagg acattaaact gatatatata aaattttaaa 1801 tgaattttta ttgtaaacaa aattaaacgg taattaaagt gaaacaaatt tatgtacaaa 1861 aggagtaaaa ttcagaaaag ttttaatgaa caaatgcttt atgaatatgg gcgtagcaat 1921 gttttgatac aaacttgatc ctgtcctgta taccacagga cacgcttcct tttacctggt 1981 acattccttt aaacgatcct agtatacgct ttattcgggg taagcccgaa aaaagtattc 2041 gaaactgtaa ccgttaagta tttacagatc actagccaat gaagataaat tacaataaca 2101 ttttgtaaac acttttgatc gaaaacgccg atttgcataa ataaagttgg attgagtagg 2161 gtgaaaaagg aaaatattta cctgctgcat ttttgcatat gaaccggtca aggtaataag 2221 atcctgagaa ttc // LOCUS DROACS2 2131 bp DNA INV 15-JUN-1988 DEFINITION D.melanogaster scute gene encoding nerve differentiation, complete cds. ACCESSION M17119 NID g156745 KEYWORDS nerve differentiation; neurogenesis. SEGMENT 2 of 2 SOURCE D.melanogaster (strain Canton-S, adult male) DNA, clone 9RR64. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2131) AUTHORS Villares,R. and Cabrera,C.V. TITLE The achaete-achaete gene complex of D. melanogaster: Conserved domains in a subset of genes required for neurogenesis and their homology to myc JOURNAL Cell 50, 415-424 (1987) MEDLINE 87273503 REFERENCE 2 (bases 1 to 2131) AUTHORS Villares,R. JOURNAL Unpublished (1988) COMMENT [2] revises [1]. Draft entry and computer-readable sequence for [1] kindly provided by R.Villares, 24-SEP-1988. The mutation at position 1147 generates a stop codon in strain sc-10-1. FEATURES Location/Qualifiers source 1..2131 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2131 /note="scute" /gene="sc" /allele="" /db_xref="FlyBase:FBgn0004170" mRNA 544..>1965 /gene="sc" /note="scute mRNA (alt.)" /db_xref="FlyBase:FBgn0004170" mRNA 549..>1965 /gene="sc" /note="scute mRNA (alt.)" /db_xref="FlyBase:FBgn0004170" variation 645 /gene="sc" /note="a in DNA; t in cDNA" /db_xref="FlyBase:FBgn0004170" CDS 661..1698 /gene="sc" /note="scute protein" /codon_start=1 /db_xref="FlyBase:FBgn0004170" /db_xref="PID:g156748" /translation="MKNNNNTTKSTTMSSSVLSTNETFPTTINSATKIFRYQHIMPAP SPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQ RRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIR SLQDLVDDLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNRISVSP VQQQQQLQRQQFNHQPLTALSLNTNLVGTSVPGGDAGCVSTSKNQQTCHSPTSSFNSS MSFDSGTYEGVPQQISTHLDRLDHLDNELHTHSQLQLKFEPYEHFQLDEEDCTPDDEE ILDYISLWQEQ" variation 676 /gene="sc" /note="a in DNA; t in cDNA" /db_xref="FlyBase:FBgn0004170" variation 1143 /gene="sc" /note="c in DNA; g in cDNA" /db_xref="FlyBase:FBgn0004170" mutation 1147 /gene="sc" /note="c in wt; t in sc-10-1" /db_xref="FlyBase:FBgn0004170" variation 1305 /gene="sc" /note="t in DNA; c in cDNA" /db_xref="FlyBase:FBgn0004170" variation 1433 /gene="sc" /note="c in DNA; t in cDNA" /db_xref="FlyBase:FBgn0004170" variation 1452..1454 /gene="sc" /note="aac in DNA; ac in cDNA (causing a frame shift)" /db_xref="FlyBase:FBgn0004170" BASE COUNT 629 a 491 c 434 g 577 t ORIGIN About 21 kb after segment 1; chromosome 1B1/2-1B4/5. 1 aaaaaatttt gatccttttg ataatttaat tggagaaata agtgaaattg tttgaacacc 61 tttagggagc gtactccgaa tgtctaataa ggaggatccc aggatcggct gtcgatccct 121 tggatccgtc cggcgctaat gaatagaagc gtgcgtgagc tgcacataaa attggcgatc 181 gcgacttttg ctaagttaat taacacagaa atcaaattcc tggcgtgccg tagcaaaaag 241 agccctcact cagatacctt gatcgttttt cgatatttcg agttgatatt ttgagtttaa 301 aatttgagtg tttcttttgg actgtcgagt gagaacagtt ttcctgtggg atactcgagt 361 acctgagaca gagaaagaga gagagactac ctgtggctca ctcacttcga gttccctacc 421 tgtgcaggca gctcttgccg tcactctctc tctctctttc tctccgattc tctcgcccgt 481 ttctctgcct gagtgttgtg cagagagttg cataaagggt acataacgcg agggtttagg 541 acgaagggac tcattcttgt gtaaggtgtc aaacgatcaa gttcaagtat tgtactctgt 601 tcatttattt ttttctgttg atcgttatcc ggaaagtgaa agaaagctcc gagtgtgtta 661 atgaaaaaca ataataatac aacgaaaagc actaccatgt catcgagtgt gctgtccacc 721 aacgaaacgt ttccaacgac catcaattcg gcaacgaaga tctttcgtta tcagcacata 781 atgccagccc ctagtccatt aattcccggt ggcaatcaaa atcaacccgc tggcacaatg 841 ccaattaaga ctcgcaagta tacaccaagg ggtatggcac tgaccagatg ctctgaatca 901 gtatcatctc tatcgcctgg ttcctcgccg gctccatata atgtagacca atcccagtcg 961 gtccaaaggc gcaatgctag agaacgaaat cgtgtaaagc aggtgaacaa cagcttcgcc 1021 aggttgcggc aacatatacc acaatccata atcacggatt tgacaaaggg tggtggtcga 1081 ggacctcaca aaaagatctc caaagtagac acactgcgca ttgccgtcga gtacatccgg 1141 agccttcagg atctggtgga tgacctaaat gggggcagca atattggtgc caacaatgca 1201 gtcacccagc ttcaactttg tttggatgag tccagcagtc acagttcgag cagcagtact 1261 tgcagttcct cagggcataa tacctactat caaaacagga tctctgtcag tcctgtgcaa 1321 caacagcagc agctacagag gcagcagttc aatcaccaac cgctgacagc gctctcatta 1381 aataccaact tggtgggcac atccgtacca ggtggagatg caggatgcgt atccaccagc 1441 aaaaaccagc aaacctgcca ctcgccaaca tcatcattca actccagcat gtcctttgat 1501 tcaggcacct acgaaggagt tccccaacaa atatccaccc acctggatcg tctggatcat 1561 ctggacaacg aattacacac gcactcccaa cttcagctaa aatttgaacc gtacgaacat 1621 tttcaattag acgaggagga ctgcaccccc gacgacgagg agattttgga ctacatctct 1681 ctatggcagg agcagtgact taatccccaa aatttaccac cacgccctat tttcttctag 1741 tcaatgttga gttgaaccaa gtgcctcaaa ttgtaaataa cactaataca aaaacaacat 1801 acccccaatt tttttttctt actttaagct atttttttac attgttaaga accacgagac 1861 cagtttcaaa tttatatatt tatgaaataa ctatagcatg gaaacgaaaa catatttttt 1921 tggctaatac aattttatgt taattagttt tggtggaaaa ataaaatgaa aaaattaaac 1981 gaaaaataat atttaagttt ttttgtacaa aggggatcca tctattgcat caggtttgta 2041 aaacattcgg gtactacttg cattgccttg cagtgccgat gggaccatgt gcagccgtta 2101 tgtacattgg ttgctttgca ttggttttcc a // LOCUS DROAMA 2135 bp DNA INV 15-MAR-1990 DEFINITION D.melanogaster amalgam protein (ama) gene, complete cds. ACCESSION M23561 NID g156920 KEYWORDS amalgam protein. SOURCE D.melanogaster (Oregon R P2) embryo, cDNA to mRNA, and DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2135) AUTHORS Seeger,M.A., Haffley,L. and Kaufman,T.C. TITLE Characterization of amalgam: A member of the immunoglobulin superfamily from Drosophila JOURNAL Cell 55, 589-600 (1988) MEDLINE 89028670 FEATURES Location/Qualifiers source 1..2135 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2135 /note="Amalgam" /gene="Ama" /allele="" /db_xref="FlyBase:FBgn0000071" prim_transcript 83..>1980 /gene="Ama" /note="ama mRNA and introns" intron 311..626 /gene="Ama" /note="ama intron" /db_xref="FlyBase:FBgn0000071" sig_peptide 634..702 /gene="Ama" /note="amalgam protein signal peptide" /db_xref="FlyBase:FBgn0000071" CDS 634..1635 /gene="Ama" /note="amalgam protein precursor" /codon_start=1 /db_xref="FlyBase:FBgn0000071" /db_xref="PID:g156921" /translation="MARLRLLIGLIFCLAISLDSVLSAPVISQISKDVVASVGDSVEF NCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDKRYNVTVTEGPKTGSAIYTF RIQNIEVSDMGPYECQVLVSATEKVTKKLSLQIKTPPVIAENTPKSTLVTEGQNLELT CHANGFPKPTISWAREHNAVMPAGGHLLAEPTLRIRSVHRMDRGGYYCIAQNGEGQPD KRLIRVEVEFRPQIAVQRPKIAQMVSHSAELECSVQGYPAPTVVWHKNGVPLQSSRHH EVANTASSSGTTTSVLRIDSVGEEDFGDYYCNATNKLGHADARLHLFQTVIPVPSLS" mat_peptide 703..1632 /gene="Ama" /note="amalgam protein" /db_xref="FlyBase:FBgn0000071" BASE COUNT 576 a 520 c 506 g 533 t ORIGIN 1 bp upstream of Xba site. 1 tctagacaca gccgcggtaa tcaatcataa tggtgtctat ctgcttcatt ctcgcggtgt 61 acaaatttcg ggactttcct tgagaaaccg agccatcgac gtcggcgcgt caggaagaat 121 acaaaaataa gaacccgatt ctcagaacct cagcagagat acggattttt gagccgagct 181 cggtcgcctc tttcaattca gtcgagtccc gaacgcgaag tgaagcgcat tgaacccaca 241 ttgaactgag agatagtcga ggaaaaagag tcacaaaatc aacagcaaca tcctgtaaat 301 aaacagaaat gtatgaatta tattaaaata agacgataaa gctgaaaagt gtgtacaagc 361 cttaaaaatg tttcaaaacg agtgtgtgtg cagaattctt tccttcttat ttacttttga 421 aagatacttt taaagatata cttgtgacct ttaaattatt attctataat tgaacctagt 481 tttagtttat tatattgaat tcgaagatgg gttaaaaatg gcagttctcc attacatacg 541 aaatatttag aatggctaac gcgatcaaaa gactcaacat aaagtgatac actaataaat 601 ctcaaatcta ttttgatttc ttacagacca gacatggcgc gtctgcggct tctaatcggt 661 cttatattct gccttgcgat cagcttggat tcggtgctta gtgccccagt gatcagccag 721 atcagcaagg acgtggtggc cagtgtgggc gactctgtgg agttcaactg caccgtggag 781 gaggtgggac agctctcggt gagctgggcc aagcgtccca gcgagtcgga caccaactcg 841 gtggtgctct ccatgcggaa tatcctcagt ctgcccgaca agcggtacaa cgtaacggtc 901 accgaaggac ccaagaccgg aagtgccatt tacaccttcc gcattcagaa catcgaagtc 961 agtgacatgg gtccgtacga gtgtcaggtg cttgtttcgg ccacggagaa ggtgaccaag 1021 aagctgagcc tgcagatcaa gaccccgccg gtgattgcgg agaacacccc caagagcacc 1081 ctggtgacag agggacagaa tctggagctg acctgccatg ccaatggctt tcccaagcct 1141 acgatctcct gggcccgcga gcataatgca gtgatgcctg ccggtggcca tttgctggcc 1201 gaaccaactc tccggattcg ttccgtgcac cggatggatc gcggcggcta ctactgcatc 1261 gcgcagaacg gagagggcca gccggacaag aggttgatcc gggtcgaagt ggagttccgt 1321 ccgcagattg ccgtccagag gcccaagatc gcccaaatgg tgtcccattc cgcggagctg 1381 gagtgctccg tgcagggcta cccggctccg actgtagttt ggcacaagaa tggcgtgccc 1441 ctgcagtcta gccggcacca cgaggtggcc aacaccgcct cctcctcggg aaccacaacc 1501 tctgtgctgc gcatcgatag cgtgggcgag gaggactttg gggactacta ctgcaatgcc 1561 accaataagc tgggacacgc cgatgcgcga ctgcatctct tccagaccgt catcccagtg 1621 ccctccttgt cgtaataagc cctcaacgtc tgatttccat tcccacgcaa caagactgga 1681 accctcactt tcgcctctcg tctcgctttt tcggcaattc gccagtccgg atgcggtctg 1741 tgtttatatt attaatgatt cattcaatta gctcccattc agacttcatt attttcggac 1801 acacttgaga tcgagccacc gcttgtgcct tatgaatttt gctctgcatc cgtcggcttg 1861 tgcaaacaca cattaatatg cttaagtaaa taacgttctc tgataaagtt taatcggtct 1921 tttcctatgt ggttgggttg gcttgtatac ggtgtaagtt aaataccatg agagaataaa 1981 cacctcttga agcaacgaat taaagggttt gtcattcaat aaaactaagc caggagacaa 2041 ggcattgtca aaagtatttc attgttttat cgagagggaa tctaaaaata tatggtaagt 2101 gcagatataa atgaaaaatt aatcacttct aaaca // LOCUS DROANKY 5069 bp DNA INV 25-OCT-1994 DEFINITION Drosophila melanogaster ankyrin mRNA, complete cds. ACCESSION L35601 NID g557083 KEYWORDS ankyrin. SOURCE Drosophila melanogaster. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 5069) AUTHORS Dubreuil,R.R. and Yu,J. TITLE Ankyrin and beta-spectrin accumulate independently of alpha-spectrin in Drosophila JOURNAL Proc. Natl. Acad. Sci. U.S.A. 91 (22), 10285-10289 (1994) MEDLINE 95024098 FEATURES Location/Qualifiers source 1..5069 /organism="Drosophila melanogaster" /isolate="A11" /isolate="A631" /db_xref="taxon:7227" /clone_lib="Nick Brown and Carl Thummel" /clone="Nick Brown and Carl Thummel" mRNA 1..5069 /gene="Ank" /db_xref="FlyBase:FBgn0011747" 5'UTR 1..33 /gene="Ank" /db_xref="FlyBase:FBgn0011747" gene 1..5069 /note="Ankyrin" /gene="Ank" /allele="" /db_xref="FlyBase:FBgn0011747" CDS 34..4683 /gene="Ank" /codon_start=1 /db_xref="FlyBase:FBgn0011747" /product="ankyrin" /db_xref="PID:g557084" /translation="MTLGDVRVENKIQTRSETCAINGMALDNKNGIIKQNDATISFLR AARSGDIKKVMDFLDCGEISDINSCNANGLNALHLAAKDGYVDICCELLRRGIKIDNA TKKGNTALHIASLAGQHDVINQLILYNANVNVQSLNGFTPLYMAAQENHDNCCRTLLA NGANPSLSTEDGFTPLAVAMQQGHDKIVAVLLENDVRGKVRLPALHIAAKKNDVNAAK LLLQHDPNADIVSKSGFTPLHIAAHYGNVDIATLLLNNKADVNYVAKHNITPLHVACK WGKLSLCTLLLCRGAKIDAATRDGLTPLHCASRSGHVEVIKHLLQQNAPILTKTKNGL SALHMAAQGEHDEAAHLLLDNKAPVDEVTVDYLTALHVAAHCGHVKVAKLLLDYKANP NARALNGFTPLHIACKKNRIKMVELLIKHGANIGATTESGLTPLHVASFMGCINIVIY LLQHEASADLPTIRGETPLHLAARANQADIIRILLRSAKVDAIVREGQTPLHVASRLG NINIIMLLLQHGAEINAQSNDKYSALHIAAKEGQENIVQVLLENGAENNAVTKKGFTP LHLACKYGKQNVVQILLQNGASIDFQGKNDVTPLHVATHYNNPSIVELLLKNGSSPNL CARNGQCAIHIACKKNYLEIAMQLLQHGADVNIISKSGFSPLHLAAQGGNVDMVQLLL EYGVISAAAKNGLTPLHVAAQEGHVLVSQILLEHGANISERTRNGYTPLHMAAHYGHL DLVKFFIENDADIEMSSNIGYTPLHQAAQQGHIMIINLLLRHKANPNALTKDGNTALH IASNLGYVTVMESLKIVTSTSVINSNIGAIEEKLKVMTPELMQETLLSDSDDESCDDL LDHNHYKYMATDDLKANYGQDQKNFDTTNTDHDLTDVSVLNKKEILPNEMSCIELTEI GHKPDNVVIARSQVHLGFLVSFLVDARGGSMRGYRHNGVRIIVPPKACAEPTRITCRY VKPQRVVNPPPLMEGEALVSRILEMSPVDGMFLSPITLEVPHYGTLRKNEREIIILRS DNGESWREHNLYKDIIGEDINQTEEFHSDRIVRIVTQNVPHFFAVVSRVRQEVHVIGP DGGTVFSTAVPQVKAIFPPHALTKKIRVGLQAQSVDLVECSKLLGQGVAVSPVVTVEP RRRKFHKAITLSIPAPKACTNSMVNACYGNGNSSSPTLRLLCSISGGQTRATWEDVTG STPLSFVRDSVTFTTTVSARFWLIDCRNIIDAGRMATELYSHLAKVPFYVKFVIFAKR ISQTEAKFSVFCMTDDKEDKTLEQQEYFTEVAKSRDIEVLQNQIVYLEFAGNIVPILK KGEQLYTKFQPFCENRLSFSAHIKDQEFPHGRICFMTYPMVGPDEVPLKPLCTLNISV DFKTITNHLERDNLHSLNDCINAHGKLNHNENIVFGVKEQQVKKIDITKACIMSSDIK LIHEADVILDDICSHLGSDWPLLANVLGVSQADIDLVKTEFLLNDSVKQSMAMLQLWL EHGGILTGNVLAEALYKIGRSDIVEKSFKNAEFGTHQPEKVLPTAGIGKDGDYEQ" 3'UTR 4684..5069 /gene="Ank" /db_xref="FlyBase:FBgn0011747" BASE COUNT 1612 a 996 c 1048 g 1413 t ORIGIN 1 gcaattctta ataattggcc attatattaa attatgacgc ttggtgatgt acgagttgag 61 aacaaaatac aaacaagaag tgaaacctgt gctatcaatg gaatggcttt agacaacaag 121 aatggaatca taaaacagaa tgacgcaacc atttcgttct tacgtgctgc tcgcagcgga 181 gacattaaaa aggtgatgga ttttttggac tgtggagaaa tatcagacat aaatagctgc 241 aatgcaaacg gtcttaatgc acttcattta gctgcaaagg acggatatgt ggacatatgc 301 tgcgagttgc taagaagggg cataaagatc gataatgcca caaaaaaggg aaacacagcc 361 ttgcacattg cgtctttggc ggggcagcat gatgtcatca atcagctaat tttatataat 421 gctaatgtga acgtgcagtc tcttaatggt ttcaccccgc tttatatggc agcacaagaa 481 aaccacgaca attgttgtcg aaccctattg gccaatgggg caaatccgtc attatctaca 541 gaagatggct tcacaccact tgcggtagca atgcagcagg gacacgacaa aattgtagct 601 gtcttacttg aaaatgacgt gcgtgggaag gttcgcctac cagctcttca tattgctgcg 661 aaaaaaaatg atgtaaatgc agctaagtta ttacttcaac atgatcccaa tgctgacatc 721 gtttccaaat caggattcac ccctttgcac atagcagctc attatgggaa cgtggacatt 781 gccactttgc ttttgaacaa caaagcagat gtaaactatg tagccaaaca taacataact 841 cccttacatg tggcatgtaa atggggaaag ttatcacttt gcactttatt actgtgccga 901 ggagcaaaaa tagatgcggc gactcgtgat ggtcttacac cacttcactg tgcgtctcgc 961 tccggtcatg tagaagttat taagcatttg ttgcagcaaa acgcgccgat actgacaaaa 1021 acgaagaatg gtctgtctgc gctccacatg gctgcacagg gtgagcacga cgaagcagct 1081 catttattgt tggacaacaa ggctccagta gatgaagtta ctgtggatta cttaacagct 1141 cttcacgttg ctgctcactg tggtcatgtt aaagtagcta agcttttact tgattacaag 1201 gcaaatccaa atgcccgcgc gctcaacggt ttcactcctc ttcatattgc gtgcaagaaa 1261 aatcgtatta agatggttga actacttatt aagcacggag ctaacattgg cgcaaccacg 1321 gaatctggct taacaccttt acatgtagct agttttatgg gatgtataaa tattgtaata 1381 tatttactac aacatgaggc tagtgcggat ttaccaacaa tacgcggaga aacaccactt 1441 cacttggcag ctcgtgctaa tcaggcggat attattcgaa ttttacttcg cagcgcaaaa 1501 gtggatgcta ttgtccgtga aggccaaacg ccacttcatg tagcttctcg attaggaaat 1561 attaatataa ttatgttatt actgcagcat ggagcagaga taaatgctca atctaatgac 1621 aaatattcgg cgctgcatat tgctgcaaaa gaaggacaag agaatatagt ccaagtgtta 1681 ctggaaaatg gtgcggaaaa taatgctgtt accaaaaaag ggtttactcc actgcattta 1741 gcttgcaaat acggaaagca gaatgtggtt caaatattac tacaaaatgg agcttctatt 1801 gattttcagg ggaaaaatga tgtgacccca ttacacgtgg ccacgcacta caataatccc 1861 tcaatagtag aactcctttt aaaaaatggg tcatcgccaa atttatgtgc ccgaaatggt 1921 caatgtgcta ttcacatagc ttgcaaaaaa aattatctgg aaattgcgat gcagctgttg 1981 caacacggtg cagacgttaa tattattagc aagagtggct tctctccgtt acatttggcg 2041 gctcaagggg gaaacgttga tatggtccaa ctacttctag agtatggagt tattagcgcc 2101 gctgcaaaaa atggcctaac accattacat gtggctgccc aggagggcca tgttcttgta 2161 tcacagattt tactggagca cggtgctaac atttcagagc gcactaggaa tggttatact 2221 ccccttcata tggctgccca ttatggtcac ctcgatcttg tcaagttttt tattgagaac 2281 gacgctgaca ttgagatgtc ttctaatatc gggtataccc cgcttcatca agccgctcag 2341 caaggtcaca ttatgattat taatctttta ttacgccata aagcgaatcc aaatgcttta 2401 acaaaagacg ggaacacagc tctccacatt gcaagtaacc ttggatacgt aactgtaatg 2461 gaatccctca aaattgtcac ttcaacatcc gttattaatt caaatattgg tgcgattgaa 2521 gaaaaactca aggtaatgac tccagagctt atgcaagaaa ccttactttc cgattccgat 2581 gacgaatctt gtgatgatct tttggatcat aaccattaca aatacatggc aactgatgat 2641 ttaaaagcca actacggcca ggatcagaag aacttcgata ctacaaacac cgaccacgat 2701 cttactgatg tttcagtact aaataagaaa gaaatactac ccaatgaaat gagctgtatt 2761 gaattgactg aaatcgggca caaacccgat aacgttgtta ttgcccgatc ccaagttcat 2821 ttagggtttc tggtgtcgtt cttggtagat gcacgtggcg gatccatgcg cggatatcgg 2881 cacaatggtg tgcgcattat cgtacctcca aaggcctgcg ctgaaccaac acgaataaca 2941 tgtcgatatg ttaagccgca aagggtagtc aaccctccgc ctttaatgga gggtgaagca 3001 cttgtgagtc gcattttgga aatgtcacct gttgacggaa tgtttttaag tccaataact 3061 ttagaagttc cacactatgg cacccttaga aaaaacgagc gcgaaattat tatactccgg 3121 tccgacaatg gagaaagttg gcgtgagcat aacttatata aagacataat aggtgaagat 3181 ataaaccaaa cggaggaatt tcattcggat cgcatcgttc ggatcgttac tcaaaatgtt 3241 ccgcactttt ttgctgttgt ttcgcgagtt cgtcaggaag tgcacgttat tggacctgat 3301 ggtggaaccg ttttctctac agcagtgccc caggtcaaag ctatatttcc gcctcatgct 3361 ttaactaaaa aaattcgagt cggtcttcag gctcagtcag tagacctggt tgaatgttct 3421 aaactgctcg gtcaaggggt cgctgtctca cccgtagtaa ctgtggagcc acgccgtcga 3481 aaatttcaca aagctattac attaagcatt ccagctccaa aagcatgtac aaatagtatg 3541 gttaatgcat gttatggcaa tggaaattca agttcgccta ctcttcgact tttgtgttcc 3601 attagtggtg gtcaaacccg agcaacatgg gaggatgtta ctggatcaac accgttgtca 3661 tttgttagag acagtgtaac atttaccact actgtttctg cccggttttg gctaatagat 3721 tgccgtaata tcatagacgc aggacgaatg gccacagaac tttatagtca tttggccaaa 3781 gttccttttt atgtcaagtt tgtaatattt gcaaaacgaa tttcccaaac ggaagcaaaa 3841 ttttcagtat tttgcatgac tgatgataaa gaggataaga cccttgagca acaagaatat 3901 tttacagaag ttgccaaaag cagggatatc gaagtattgc aaaatcaaat tgtatatctt 3961 gaattcgctg gtaacattgt tcccatttta aagaaaggcg aacagctgta taccaagttt 4021 caaccttttt gcgaaaaccg gctttccttt agtgctcaca ttaaagatca agaatttcca 4081 catggtcgca tctgctttat gacctacccg atggtaggac cagatgaagt gcccctgaag 4141 ccgctttgta ctctgaacat ttcagtggat tttaaaacta taacaaacca tctcgaaaga 4201 gataacctgc atagcttgaa cgattgtata aatgcgcatg gaaaattaaa ccacaatgaa 4261 aatattgtat ttggagtaaa ggaacaacag gtgaagaaaa ttgatattac taaagcttgt 4321 ataatgtcaa gtgacatcaa actaattcat gaggctgatg taatattaga cgacatatgt 4381 agccacttag gaagtgactg gcctttgctt gcaaatgtat tgggtgtttc ccaagccgat 4441 atcgatcttg ttaaaacaga atttttgtta aacgacagcg taaagcagag catggcaatg 4501 ttacagctat ggctagaaca tggaggcata ttgacgggca atgtactagc tgaagccctc 4561 tacaaaatcg gccgctcaga tatagtggag aaaagcttta aaaatgcaga gtttggcact 4621 catcaaccgg aaaaagtttt gccgactgcc ggaattggaa aagatggcga ttatgaacag 4681 taatttacaa agtctacagg tccttagcaa gatattttta aaaacgcaga tggtaagttt 4741 agtattgata aaatatatgt actgcaacgc aggtgtcact aaaaggagta aattgatact 4801 aatgcaatac ttaacatttg accattacgt tagaaagaag aacaaattat aatatttgaa 4861 aaccagaaat gtcgatttac ctgagtaatc gatgagtaat cgagcggtat tcatcatgaa 4921 atagttgccg atatcttaaa taatttacct aaagtcgatt tattaagttt tctaaaaatt 4981 taacattttc ttgacaatca gaactattat tcaatgtatt actttgcaat ttataataaa 5041 acaatattaa cagtgttata aaaaaaaaa // LOCUS DROCACTUSA 1896 bp DNA INV 06-MAY-1993 DEFINITION Drosophila melanogaster cactus zygotic protein exons 1-6, complete cds. ACCESSION L03367 NID g157035 KEYWORDS cactus protein. SOURCE Drosophila melanogaster (strain Oregon R) (library: lambda ZAPII) embryo DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1896) AUTHORS Kidd,S. TITLE Characterisation of the Drosophila cactus locus and analysis of interactions between cactus and dorsal proteins JOURNAL Cell 71, 623-635 (1992) MEDLINE 93046661 FEATURES Location/Qualifiers source 1..1896 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /dev_stage="embryo" /tissue_lib="lambda ZAPII" /map="2.52" gene 1..1896 /note="cactus" /gene="cact" /allele="" /db_xref="FlyBase:FBgn0000250" TATA_signal 15..26 /gene="cact" /db_xref="FlyBase:FBgn0000250" exon 51..176 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=1 mRNA join(51..176,177..898,899..1076,1077..1287,1288..1376, 1377..1896) /gene="cact" /db_xref="FlyBase:FBgn0000250" mRNA join(52..176,177..898,899..1076,1077..1287,1288..1376, 1377..1896) /gene="cact" /note="alternate mRNA" /db_xref="FlyBase:FBgn0000250" exon 52..176 /gene="cact" /note="alternate exon" /db_xref="FlyBase:FBgn0000250" exon 177..898 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=2 CDS 204..1652 /gene="cact" /codon_start=1 /db_xref="FlyBase:FBgn0000250" /product="cactus zygotic protein" /db_xref="PID:g157036" /translation="MPSPTKAAEAATKATATSDCSCSAASVEQRAPSNAANPSSSLAT SGKIGGKTQDQTAAINKQKEFAVPNETSDSGFISGPQSSQIFSEEIVPDSEEQDKDQQ ESAPQKEQPVVLDSGIIDEEEDQEEQEKEEEHQDTTTATADSMRLKHSADTGIPQWTV ESHLVSRGEQLNNLGQSSSTQITGRSKVQSSTASTGNANPSGSGATSSAPPSSINIMN AWERFYQQNDDGDTPLHLACISGSVDVVAALIRMAPHPCLLNIQNDVAQTPLHLAALT AQPNIMRILLLAGAEPTVRDRHGNTALHLSCIAGEKQCVRALTEKFGATEIHEAHRQY GHRSNDKAVSSLSYACLPADLEIRNYDGERCVHLAAEAGHIDILRILVSHGADINARE GKSGRTPLHIAIEGCNEDLANFLLDECEKLNLETATYAGLTAYQFACIMNKSRMQNIL EKRGAETVTPPDSDYDSSDIEDLDDTKVSVTA" repeat_region 223..325 /standard_name="cdc10/SW16" /note="repeats 1-3" repeat_region 355..456 /standard_name="cdc10/SW16" /note="repeats 4-6" exon 899..1076 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=3 exon 1077..1287 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=4 exon 1288..1376 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=5 exon 1377..1896 /gene="cact" /db_xref="FlyBase:FBgn0000250" /number=6 BASE COUNT 573 a 523 c 469 g 331 t ORIGIN 1 tgtatagact gccatataaa tatatacata tcagcgcgct ccctcaattt cattcgctat 61 cgaaacgtga aagaaagcag acgtgcgtcc gggtactatg cgaattgcag attacaaaca 121 tttaaaccat aaatacgcgt tttaaagaca gcttcgcaag acaattaacc agcaagccca 181 actgagagag gaaaagcacg aaaatgccga gcccaacaaa agcagcggag gcagcaacaa 241 aggcaacagc aacaagtgac tgcagctgca gcgctgccag tgttgagcag cgcgccccct 301 caaacgcggc taacccctcg tcctcactag ccactagcgg taaaattggc ggcaaaacac 361 aagatcaaac ggccgccatt aacaagcaaa aggaatttgc cgtgccaaac gaaaccagtg 421 attcgggctt catctccggc ccgcaatcct cgcagatctt cagcgaggag atagtccccg 481 atagcgagga acaggataag gatcagcagg agtcggcacc ccaaaaggaa cagcccgttg 541 tcctcgattc cggtattatc gacgaagaag aggatcagga ggagcaggag aaagaggagg 601 agcaccagga caccaccact gccaccgccg attcaatgcg actcaaacac agcgcggaca 661 caggcatccc acaatggacc gtcgaaagcc atttggtcag tcgcggcgaa cagcttaaca 721 atctcggcca gagcagcagc acccaaatca ccggtcgcag caaggttcaa tcctccacag 781 ccagcacggg gaacgcgaat ccttcgggat cgggagcaac atcgtccgct ccgcccagca 841 gcattaatat catgaacgcc tgggagcgct tctatcaaca aaacgacgac ggcgacacac 901 ctttgcacct ggcctgtatt tcgggatcag tggacgtggt ggccgccctg attcgcatgg 961 ctcctcatcc gtgcctgctc aacatccaga acgatgtggc ccagacaccc cttcatctgg 1021 ccgctcttac tgcccagccg aacatcatga ggatactttt actcgccgga gctgagccca 1081 cggtgcgcga tcgtcatgga aacacagctc tgcatctttc ctgcatcgcc ggagagaaac 1141 agtgcgtccg tgccttgaca gagaagttcg gcgccacgga aatccatgag gcccaccgac 1201 aatatggaca ccgatccaac gacaaagcgg tcagttccct gagctacgcc tgcctgcccg 1261 ccgatctgga gattcgcaac tacgatggag aacgctgtgt gcatttggcc gccgaggcgg 1321 gtcacattga tatcttacgc attttggtat cccatggagc agacattaac gccagggagg 1381 gaaaatcggg ccgcacaccg ctgcacattg cgatcgaggg ctgcaacgag gatctggcca 1441 acttcctgct cgatgagtgc gagaagctga acctggaaac ggccacctac gccggcttga 1501 cggcctacca gtttgcgtgc atcatgaaca agtcgcgcat gcagaacatc ctggagaagc 1561 gcggagcgga gaccgtaacg cctccggaca gtgattacga cagtagcgat atcgaagatc 1621 tagacgatac gaaggtgagc gtcactgctt aagaacatgt accaagaaaa gatcactgcg 1681 atcgcgtaga gcgtaagaca caatttgaaa tgggccacca ccagcttcca aaatgttcaa 1741 aaactaagta agagaggaga agagaagtac ccagctgaac tggtattcag cgagaaaaat 1801 attgttacac ttgagaaact ctattgtaac acaatgtatt gttaaccaaa aacaaaaaca 1861 aacaaaaacg aagaaaaata tgaatcaaaa acaaaa // LOCUS DROCLPTN 4487 bp DNA INV 07-MAY-1993 DEFINITION Drosophila melanogaster calphotin gene, complete cds. ACCESSION L05080 NID g157071 KEYWORDS calphotin. SOURCE Drosophila melanogaster compound eye DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4487) AUTHORS Ballinger,D.G., Xue,N. and Harshman,K.D. TITLE A Drosophila photoreceptor cell-specific protein, calphotin, binds calcium and contains a leucine zipper JOURNAL Proc. Natl. Acad. Sci. U.S.A. 90, 1536-1540 (1993) MEDLINE 93165730 FEATURES Location/Qualifiers source 1..4487 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /cell_type="photoreceptor" /germline /tissue_type="compound eye" gene 1..4487 /note="Calphotin" /gene="Cpn" /allele="" /db_xref="FlyBase:FBgn0010218" mRNA join(488..553,999..3808) /gene="Cpn" /db_xref="FlyBase:FBgn0010218" exon 488..553 /gene="Cpn" /db_xref="FlyBase:FBgn0010218" /number=1 /label=exon1 5'UTR join(488..553,999..1121) /gene="Cpn" /db_xref="FlyBase:FBgn0010218" intron 554..998 /gene="Cpn" /db_xref="FlyBase:FBgn0010218" exon 999..3808 /gene="Cpn" /db_xref="FlyBase:FBgn0010218" /number=2 /label=exon2 CDS 1122..3743 /gene="Cpn" /codon_start=1 /db_xref="FlyBase:FBgn0010218" /product="calphotin" /db_xref="PID:g157072" /translation="MEPGTIPSPVSAPVAAPVTPSAVAAPVQVVSPAAVAVAPAVVAP APAAPTAVTPVAPPPTLASVQPATVTVPAPAPIAAASVAPVASVAPPVVAAPTPPAAS PVSTPPVAVAQIPVAVSAPVAPPVAATPTPVAPIPVAAPVIATPPVAASAPTPAAVTP VVSPVIATPPVVPANTTVPVAAPVAAVPAAVPVVAPVLAPAVAPAVAPVVAETPAPPP VAEIPVATIPECVAPLIPEVSVVATKPLAAAEPVVVAPPATETPVVAPAAASPHVSVA PAVETAVVAPVSASTEPPVAAATLTTAPETPALAPVVAESQVAANTVVATPPTPAPEP ETIAPPVVAETPEVASVAVAETTPPVVPPVAAESIPAPVVATTPVPATLAVTDPDVTA SAVPELPPVIAPSPVPSAVAETPVDLAPPVLPPVAAEPVPAVVAEETPETPAPASAPV TIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVSTPPTTASVPETTAPPAAVPTEPIDV SVLSEAAIETPVAPPVEVTTEVAVADVAPPEAAEDLIIEPVEPPAPIPDLLEQTTSVP AVEAAESTSSPIPETSLPPPNEAVASPEVAVAPITAPEPIPEPEPSLATPTEPIPVEA PVVIQEAVDAVEVPVTETSTSIPETTVEFPEAVAEKVLDPAITEAPVTTQEPDVANIN DGAPATEITTPAVEIVTAAAEVSDTAIPLIDPPVPQEIAVAEIPETETKPAEVIVEQS TIPIEAPVPEVSKYAEPVISEAPAAEVPITAGDNPDNTSVGISEVVPTIAEKPVEEVP TSEIPEQSSSPSDSVPVAKITPLLRDLQTTDVSLLAIAATLDAIGEKLKDQKARNQQV MDRLCEIEKILGPPKSN" 3'UTR 3744..3808 /gene="Cpn" /db_xref="FlyBase:FBgn0010218" BASE COUNT 1191 a 1192 c 947 g 1157 t ORIGIN 1 gggacctgtc gcattttgtt gacaactaca ttcgaaatca cggaaatgaa tcagtattgt 61 gtaaataacc agttatgtgt ctgcgagtgc agctgacaaa gcgagtggta agcgatatgc 121 actggagcac gaataaattc ttgaaagcgt ttcaccgatt tatctacccg atgcatttgg 181 caagatgcga acggaatcga taatcgaata atatgcgaat atcactcata cccagtggtg 241 ggcgccaacg catgtagcac acttttcagc gccaaatgtt tcctcgtgcg agcacggaag 301 caaatttaat atgtggctaa ggtcagctga taagcacctt agtgtctggg aattggaaaa 361 aacgcaaaaa agcacttgaa actatgcgta tactttctgc gctcaatggg caggtggtcg 421 gacttctgac cgaaggtaaa ccaatgaaaa gaggtaaaaa tgtccaagaa aactgagtca 481 acgggccagt taaacaccgt ttttctcatc ggcaagtcgg tcgctgttta aaactattca 541 acaaattaaa ttggttaata atattgaaaa tattcaaaag gattgactta cctaagaggc 601 agttcctaat agttgaccat ttcattgctg accgcttatt ttcgttaaaa aaacgaaatt 661 gtgcaagtgc cttgttttct cttacataat ttagcaacta cagttttgta aaagaaaaat 721 atatttcgat agacgtcaga agcaagagac tagttaactc aattgctctt acttttactt 781 ctcatgtagt gaagacaatt ctaatctcat ttaatcaatg taattttatt gtatagatat 841 ttgaatcagt attttccgga gaacttttat tcttattttt ctcattctta cgtggtttct 901 catcgattta attttattta agacaatggc ctaaatcatg gtcagatcca gccttgccat 961 gtctcatgtt tttctcgttt tcattcctct gttttcagtt gtcttctgac catgaaaagc 1021 tggccatgaa acatttttgc aactaagcat tggacaaggc acaatccgcc caaaaggaaa 1081 aaacggatta acttttacgt gaaagtgggc aaaggataga catggaacca ggaaccattc 1141 catcgcctgt ttcagcacca gttgctgcgc ctgtaacgcc atcagcagtg gctgcccctg 1201 tccaagtagt tagtcctgcg gcagtggctg ttgcaccagc ggtagtggct cccgcaccag 1261 ccgcaccgac tgcagtcact ccagttgctc caccgcccac ccttgcaagt gtgcaaccgg 1321 caacagttac tgttccagct ccagctccaa ttgctgccgc atccgtcgct cctgtcgcat 1381 ctgtggcgcc tccagttgtt gcagctccaa ctccgccggc agcaagtcca gtttcaacac 1441 cacccgttgc tgttgctcag attccggtcg ctgtttcagc accagtggca cctcccgttg 1501 ctgcaacacc cactcctgtt gccccaattc ctgtagctgc gcctgtgata gcgacaccac 1561 ctgttgctgc ctctgccccc actccggctg ccgtgactcc cgttgtttcg cctgtgatcg 1621 ccacaccacc tgtggttccc gctaacacca cggttcccgt tgcagcacct gtagctgctg 1681 taccagctgc tgttcctgtt gttgccccag ttcttgcgcc tgccgttgct cctgcagttg 1741 cccccgtcgt cgccgagact ccagctccac cacctgttgc tgagattccg gttgcaacca 1801 taccggagtg cgttgcacct ctcatccccg aggtttccgt cgtggcaacg aaaccactag 1861 ctgcagctga gccagtggtc gttgctccac cggctactga aaccccagtc gttgctccgg 1921 ctgcagcttc cccccatgtg tcggttgcac cagctgtgga gaccgcagtg gtcgctcctg 1981 taagtgcttc gactgagccc ccggtagctg ctgcgactct aacaactgca ccagaaacac 2041 cagcccttgc tccagtcgtt gccgagtccc aagttgctgc gaatactgtt gtagctacac 2101 ctcctactcc agccccagag ccagaaacca ttgcaccacc tgttgttgca gaaaccccag 2161 aagttgcttc agttgctgtt gctgagacaa caccacccgt tgtacctcct gtggccgcag 2221 aatcaatacc agcgccagtc gttgccacga caccagttcc tgcaacacta gcagtaacgg 2281 atccggatgt cactgcatct gctgttcccg aattacctcc ggtgatcgct ccatcacccg 2341 ttcctagtgc tgttgctgaa actcctgtcg acttagcgcc acctgttctc cctcctgtgg 2401 ctgccgaacc tgtaccagct gtagtggctg aagaaactcc tgagacacca gcaccagcat 2461 cagcaccagt gaccatagca gctttagata taccagaagt tgctcctgtg atcgccgcac 2521 cctctgatgc acctgctgaa gctccgtctg ccgctgctcc catcgtttct actccaccaa 2581 ctacggcttc tgttcccgag accacggcac cacctgcggc agtgcctacg gaacctatcg 2641 atgtttctgt actatcagaa gctgccattg aaacgccagt tgcaccgcct gtcgaagtta 2701 caacagaagt tgcagttgca gacgttgctc cacctgaggc agctgaggat ttaataatcg 2761 agcctgtgga accaccagct cctattccgg atttattaga acaaactaca tccgtgccag 2821 ctgttgaagc tgcagaatca acatcttcac caataccaga gacctcatta ccgccgccaa 2881 atgaagcagt tgcctctcca gaagtggctg tcgctccaat tacagctcca gagcccatac 2941 ctgaaccgga accaagccta gcgaccccta cagaacccat acctgtggag gcacctgtcg 3001 taatccagga agcagtggat gctgtagagg tgccggtgac agaaacttca acatcgattc 3061 cagaaactac ggttgagttt cctgaagctg tagccgaaaa agtcctggat cctgccataa 3121 ctgaagctcc tgtcactact caggaaccag atgttgcaaa cattaatgac ggtgctccag 3181 ctaccgaaat caccacaccc gctgttgaaa tcgttactgc tgctgcagaa gtatctgata 3241 ctgccatacc gctcattgac cctccggttc ctcaagagat cgcagtagct gaaattccag 3301 agacagagac aaagccggca gaggtcattg ttgaacagag caccatccca atagaggcac 3361 cagtcccgga ggtttcaaaa tacgcagaac cagtgatttc tgaagctcca gctgccgaag 3421 taccaattac ggccggggac aacccagaca atactagtgt gggaatatct gaagttgttc 3481 ccaccattgc agagaaacca gttgaagagg ttcccacttc ggaaatcccc gaacaatcat 3541 cgtcaccctc agattccgtt cccgtagcaa agataactcc tttgctaaga gatcttcaga 3601 ccaccgatgt ttcgctattg gctattgcag ccaccctgga tgccattgga gaaaagctaa 3661 aggatcaaaa ggccagaaat cagcaggtaa tggacagact ctgcgaaatc gagaaaattc 3721 ttggtcctcc caaatccaat tagctcaagt ttaaagcctg gatcatgtaa agtaaagcta 3781 ctaataaagc gttatttcac caattttaaa gatatacaaa tttattacta atttcctttt 3841 cataataggg ttaaaagagc caaggtatgg ctaggttgtc acaaattgtt ccgtgcaaaa 3901 ttaatgcaac caaaacaaat ctaccatttc cactttttgg acatatcagc atagctggtt 3961 ccaaagcccc agccacagaa cctaatttgc aagcgcgtcg aaaattttcc cgtggaaatt 4021 agcattccaa aagggagtgg gacataaata cacagcgatt gtaacgggaa acgaatgata 4081 tttccccact ttgtcagcga aaaacgacat aaattagagt tagctctctg cttttgtatc 4141 gagaaagctg gcgacttctg ataattggaa atttatcaat gaataattta atttaaagct 4201 tctctgtacg cttccttaaa agcttaaata taaagactat cccttattga tttcatttaa 4261 aaatgagccc atggaattta ttttgatctg tcctgacgca aaagtcaatc gagagtcgta 4321 aaaacggtcg aaaggggcca aaatgaaaac ttttattgcg gcaaactgaa atttgtgttt 4381 atggggcaag taagtccggt tgagtcaaac acttcggcga ttattctaat catttgcatt 4441 gtttaagctg gtcggctgac tggttcgttg gcctatctcc caaagtt // LOCUS DRODEBB 1206 bp DNA INV 27-MAY-1994 DEFINITION Drosophila melanogaster membrane-associated protein (deb-b) gene, complete cds. ACCESSION L33341 NID g495020 KEYWORDS membrane-associated protein. SOURCE Drosophila melanogaster DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1206) AUTHORS Vincent,W.S.III., Goldstein,E.S. and Allen,S.A. TITLE Sequence and expression of two regulated transcription units during Drosophila melanogaster development: Deb-A and Deb-B JOURNAL Biochim. Biophys. Acta 1049, 59-68 (1990) MEDLINE 90291029 FEATURES Location/Qualifiers source 1..1206 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /map="chromosome 2" enhancer 74..81 /gene="DebB" /db_xref="FlyBase:FBgn0000426" gene 74..797 /note="Developmental embryonic B" /gene="DebB" /allele="" /db_xref="FlyBase:FBgn0000426" CAAT_signal 312..315 /gene="DebB" /db_xref="FlyBase:FBgn0000426" TATA_signal 352..358 /gene="DebB" /db_xref="FlyBase:FBgn0000426" mRNA 376..797 /gene="DebB" /db_xref="FlyBase:FBgn0000426" CDS 469..774 /gene="DebB" /codon_start=1 /evidence=experimental /product="membrane-associated protein" /db_xref="PID:g495021" /translation="MSAGMPINPKPFLNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNM QLANTEEVIEGSVTGNLGEVLIRCNNVLYIKGMEDDDEEGECATSQWIHLHTPTPYF" polyA_signal 792..797 /gene="DebB" /db_xref="FlyBase:FBgn0000426" BASE COUNT 298 a 300 c 289 g 319 t ORIGIN 1 ctgaagacag tgcggccagg tgccacaggt agtcatccag taaggcaaag tttgactgtc 61 ttccggtcta aactgagtga aatctccgcc gccagcaggg caccaaagtt aagttcggtg 121 gttataaact ttgccgttgt cttgtagttt ttccaaggca gcgcgactct tggtgctctc 181 cctggctccg gactttttac tacgtctctt gggcgtgatt ccctggactt ccagtccgct 241 cgttccgtaa ggccattcca agcgctgaaa ttaaataaaa ttttaatttt ggcgcttttt 301 gaatggtttt tcaatactct tcttctatgc tattcttctt cttgttctgg tatgtttaac 361 acgcgcagct gtggtcacac tacacaaaaa aaacgcgaaa agccggcgat tttcggcacg 421 cttgttgtaa tattttataa aaaaggcagg aaaaatcaaa taaacagaat gtcggctggt 481 atgcccatta accccaagcc cttcctgaac ggcctgacgg gaaaaccggt gctggtgaag 541 ctgaagtggg gccaggagta caagggcttc ctggtctccg tcgacggcta catgaacatg 601 cagctggcga acacggagga agtgatcgag ggctccgtga ctggtaatct tggcgaggtg 661 ctcatccgct gcaacaacgt gctgtatatc aagggcatgg aggacgacga cgaggagggc 721 gaatgcgcga ctagccaatg gattcaccta catacaccca caccttactt ctaagtctac 781 aaacgtaatg aaataaagct aacttaattt tgtaagaccc ggcctacctg caatttgcga 841 ttcctattca atgcgttctc ggtgtttgcc gcgttcgcat cgatgccgag cacgcggtaa 901 ccatactgcg ccaagcgcga ggataaatac cctttgccat cgcccgcgtc tacaatgaag 961 caatcttgac cggagttctt cacaagctgg tccacgagaa cggctgttaa atccacctaa 1021 tcggagagat taatcaattc ctaaaatact ctcatttaaa atggttggtt tacttacctc 1081 atggcacttt ttggcgctca taaactcccg aatgcttagc tgcgtggagt tcccctgacc 1141 ctcgataagt tcctccacgc tggtcaggag tttcggagga cgaagcgacg gcgttcttgt 1201 ttgttg // LOCUS DRODEC1A 3784 bp DNA INV 15-SEP-1990 DEFINITION D.melanogaster defective chorion-1 fc125 (dec-1) gene, complete cds. ACCESSION M35887 M35688 X07697 NID g157181 KEYWORDS dec-1 protein; eggshell protein. SOURCE D.melanogaster ovary, cDNA to mRNA and genomic DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 121) AUTHORS Hawley,R.J. and Waring,G.L. TITLE Cloning and analysis of the dec-1 female-sterile locus, a gene required for proper assembly of the Drosophila eggshell JOURNAL Genes Dev. 2, 341-349 (1988) MEDLINE 88243015 REFERENCE 2 (bases 44 to 3784) AUTHORS Waring,G.L., Hawley,R.J. and Schoenfeld,T. TITLE Multiple proteins are produced from the dec-1 eggshell gene in Drosophila by alternative RNA splicing and proteolytic cleavage events JOURNAL Dev. Biol. 142, 1-12 (1990) MEDLINE 91032553 COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by G.L.Waring, 28-JUN-1990. EMBL features not translated to GenBank features: key from to description PRM 14 18 put. TATA-box SITE 44 44 transcription initiation site. FEATURES Location/Qualifiers source 1..3784 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..3784 /note="defective chorion 1" /gene="dec-1" /allele="" /db_xref="FlyBase:FBgn0000427" CDS 119..3490 /gene="dec-1" /note="fc125 protein precursor (dec-1)" /codon_start=1 /db_xref="FlyBase:FBgn0000427" /db_xref="PID:g157182" /translation="MRLFSLLPLLALLVVQVAGQSEVTSDDPATDAGSTTNSTTDTKP RIPSQDEILGQMPSINPIRTGNPQMDAFYMMFPALGSLLKWGSLFPAYSILGAIPDNL QPTAAASKVVLVLADDATAKTRVARQNPPPNPLGQLMNWPALPQDFQLPSMDLGPQVG SFLAQLPAMPTVPGLLGAAAPVPAPAPAPAAAPPPAPAPAADPPAAPVPDAPQPAILG EAALQNAFTFFNPANFDASSLLGQSVPTFAPPNLDFVAQMQRQFFPGMTPAQPAAAGT DAQASDISEVRVRPEDPYSQEAQMKIKSALEMEQERQQQAQVKDQEQVPLLWFRMPTT QNQDATEEKTLEHLRVEAKLRAFERQVIAELRMLQKIELMAKQMRSSTAAQNGDSPYR ISYPLSRTPIHKITRADIEQALRDDYVRRLVNKEAQRRARNSGINTQKANALKRQAKS QDQTLSKEDIVQIMAYAYRMANEQMESEKGKQDKVYAAYRTEQNPMMMQQRQWSEEQA KIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMMQQRQWSEEQAKIQQNQ QQIQQNPMMMQQRQWSEEQAKIQQNQQQIQQNPMMVQQRQWSEEQAKIQQNQQQIQQN PMMMQQRQWSEEQAKIQHDQQMAQQMAQQGLMMTEQRQRQWSEDQAKIQQAQQMAQQT PMMMPQMQQRQWTEDPQMVQQMQQRQWAEDQTRMQMAQQNPMMQQQRQMAENPQMMQQ RQWSEEQTKIEQAQQMAQQNQMMMQQMQQRQWSEDQAQIQQQQRQMMQQTPMMMKERQ WAEENPQSVQQQGPMMMQQQMPSMMQREVEDEDNKAEDDLVGEAGPQMAGERRHRQAQ SRCPGSWRQQAQEVQVQVGAATVINYYYAAPSVRWFRVTEQATAEGGYGSNAYGVPRP VNSYQSQGYRAAVGNDEVDEMLRQHQTMARTINPKQPGEVGGSESQKSNSNPPTTLTP APQEQPQEHRVHKSPSSAPSETEIENAPSSDPQVGSIFTYGEGLLHPFMGLLPVERPD DPWNQKPYDPHHPLYTGGGSYDAYLRDGRHRRDTHIMGQGTQHGILTPGMLERLLRIK MDFQRRFPPFIQGYAESPYESYPCRGTASGSGQDF" sig_peptide 119..187 /gene="dec-1" /note="fc125 protein signal peptide" /db_xref="FlyBase:FBgn0000427" mat_peptide 188..3487 /gene="dec-1" /note="fc125 protein" /db_xref="FlyBase:FBgn0000427" BASE COUNT 1103 a 999 c 1004 g 678 t ORIGIN chromosome 7C-X. 1 gtggcaaaaa atctatttgg accaccaacc ggctgcagtc ggcagtcagt cggccaacga 61 gctccggcga acacagatcg atctttagcg atttttccga gttttgccca aatacaggat 121 gagattgttt agccttctgc cgctcctggc gcttcttgtc gtccaggttg ccggacaaag 181 tgaagtaacc tctgatgatc ctgcaacgga tgctggatca acgaccaatt ccaccacgga 241 caccaaacca aggattccca gtcaggatga gatccttggc cagatgccgt ccattaatcc 301 catccgcact ggcaatcccc agatggacgc attttacatg atgttcccgg cgttgggcag 361 cctgctcaag tggggcagcc ttttcccagc ctactcgatt ctgggcgcca ttcccgacaa 421 tctacagcct acagcggcag cctccaaggt ggtccttgtc ctggccgatg atgcgacggc 481 caagactcga gttgcccgtc aaaatccgcc accaaatcca cttggtcagc taatgaattg 541 gcccgctctg ccgcaggact tccaactgcc ttccatggat ctgggaccgc aagtgggctc 601 gtttttggcc caactgcctg ctatgcctac cgtgcctggt cttctgggtg ccgctgctcc 661 agttcctgct ccagctcctg ctcccgctgc tgctcctcct ccggcgccag ctccagctgc 721 agatcctccg gcagcacctg ttccagatgc accccaacca gccatactgg gagaagccgc 781 tctgcagaac gctttcacct tctttaaccc ggctaacttt gatgcctcca gtcttctggg 841 ccagagtgta cccacatttg ctcctccaaa tcttgatttc gtcgctcaaa tgcaaaggca 901 attcttccca ggaatgacac cggcccaacc tgcggccgct ggcacggatg cccaggcctc 961 cgacatttcc gaggtaaggg tacgtcctga ggatccgtat tcgcaagagg cacagatgaa 1021 gatcaaatcg gcacttgaaa tggagcagga gaggcaacaa caggctcagg tcaaggatca 1081 ggagcaagtg cctctcctct ggttccgaat gcccacaact cagaatcagg atgcgactga 1141 agaaaagact ctggagcatc tgcgggtcga ggccaaattg agggcattcg agcgccaggt 1201 gatagccgaa ttgagaatgc tgcagaagat cgaacttatg gctaagcaga tgaggtccag 1261 caccgcagct caaaacggag attcacccta caggatcagt tatccactga gtcggacacc 1321 cattcacaag atcacccgtg ctgatattga gcaagccctt cgggatgatt atgtccgccg 1381 attggtcaac aaggaagcgc aacgaagggc tagaaattcc ggcataaaca cccagaaggc 1441 aaatgccttg aagcgacagg ccaaatccca ggatcagact ctgtccaagg aggatatcgt 1501 ccagattatg gcgtatgcct atcgcatggc caacgaacag atggagagcg agaagggcaa 1561 gcaggacaag gtttacgcgg cctacaggac ggaacagaat ccaatgatga tgcagcaaag 1621 acaatggtcg gaggagcagg ccaagatcca acagaatcaa cagcagatcc agcaaaatcc 1681 aatgatgatg cagcaacgac aatggtcgga ggagcaggcc aagatccaac agaatcaaca 1741 gcagatccag caaaatccaa tgatgatgca gcaacgacaa tggtcggagg agcaggccaa 1801 gatccaacag aatcaacagc agatccagca aaatccaatg atgatgcagc aaagacaatg 1861 gtcggaggag caggctaaga tccaacagaa tcaacagcag atccagcaaa atccaatgat 1921 ggtgcagcaa agacaatggt cggaggagca ggccaagatc caacagaatc aacagcagat 1981 ccagcaaaat ccaatgatga tgcagcaaag acaatggtcg gaggagcagg ccaagattca 2041 gcatgatcaa cagatggcac aacagatggc acagcaaggt ctcatgatga cggagcagag 2101 gcaaaggcag tggtcagaag atcaggccaa aattcagcag gctcaacaga tggcccaaca 2161 gacacccatg atgatgccac agatgcaaca aaggcagtgg acagaggatc cccaaatggt 2221 tcagcagatg caacagaggc agtgggcaga agatcagacc aggatgcaaa tggcccaaca 2281 gaatccaatg atgcaacagc agcgacagat ggcagagaat ccgcaaatga tgcagcaaag 2341 gcaatggtcc gaggagcaga ccaaaatcga acaggctcag cagatggcac aacagaatca 2401 aatgatgatg cagcagatgc agcaaagaca atggtcggag gatcaggccc agattcaaca 2461 gcagcagaga cagatgatgc agcagacccc catgatgatg aaggagcgcc agtgggcgga 2521 ggagaacccc cagtctgtcc agcagcaagg gcccatgatg atgcagcagc agatgccatc 2581 gatgatgcag cgtgaagtag aggacgaaga taataaggca gaggatgact tagttggcga 2641 ggcgggaccc caaatggccg gagaacgaag gcaccgccag gcacaaagtc gatgccctgg 2701 gagttggcgg caacaagcgc aagaagtcca agtccaagtc ggcgccgcaa cggtaattaa 2761 ctattactat gcggcaccca gcgtccggtg gttcagagtt acggaacaag ctacggcgga 2821 aggtggctat ggatcgaatg cctatggtgt tcctcgtcca gtcaattcgt atcaaagtca 2881 aggctacagg gctgccgtgg gtaacgatga ggtagatgag atgttgcgcc agcaccagac 2941 aatggccagg acaataaacc cgaagcaacc aggcgaagtc ggtggatcgg agagccagaa 3001 gagcaactct aatcctccaa cgacgttgac accagctcca caagagcaac cgcaagagca 3061 tcgagtccac aaaagtccat catcagcacc atccgaaacc gaaatcgaaa acgcaccatc 3121 atctgacccc caagtgggtt ccattttcac ctacggcgag ggattgctgc atccgtttat 3181 gggtctgctg ccggtggaga ggcccgatga tccgtggaac cagaagccat acgatcctca 3241 ccatcctctc tacacgggcg gtgggagcta cgatgcctat ctgagggacg gtcgccatcg 3301 aagggacacg cacatcatgg gtcaaggtac gcagcatggc atcctgacac ccggcatgtt 3361 ggagagactt cttcggatca agatggattt ccagcgtaga tttcccccat ttatacaagg 3421 gtatgctgaa tcaccatacg aatcttaccc gtgtagaggt acagcctccg gttctgggca 3481 agatttctaa gccgaaaact aagaccaagc ccaagaatga ggacgaaccc gtcttcgaat 3541 tgggagccgc tgagcgtagc ctgttcgagg acgagaccaa cgattcttta gagaaagatc 3601 ccgaaccaga accggatgag gaggatgacc gggatgtgga agagcccagc gagagcagtg 3661 aacctagggg attcagcagc aaaaaaagcc gggatgagaa cgacatcgat tacttcaatt 3721 tcgatgacga ttgatgttga tgattgactt ttattataat tgccaataaa attaatatta 3781 taaa // LOCUS DRODSK 783 bp DNA INV 12-JUL-1996 DEFINITION D.melanogaster sulfated tyrosine-kinin (DSK) gene, complete cds. ACCESSION J03957 NID g1408565 KEYWORDS drosulfakinin. SOURCE D.melanogaster (strain Canton S) DNA, clone N-1. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 783) AUTHORS Nichols,R., Schneuwly,S.A. and Dixon,J.E. TITLE Identification and characterization of a drosophila homologue to the vertebrate neuropeptide cholecystokinin JOURNAL J. Biol. Chem. 263, 12167-12170 (1988) MEDLINE 88314994 COMMENT On Jul 12, 1996 this sequence version replaced gi:157301. Draft entry and computer-readable sequence for [1] kindly provided by R. Nichols, 05-JUL-1988. The drosulfakinin protein is homologous to the cholecystokinin (CKK)-gastrin peptide family. FEATURES Location/Qualifiers source 1..783 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..783 /note="Drosulfakinin" /gene="Dsk" /allele="" /db_xref="FlyBase:FBgn0000500" sig_peptide 255..308 /gene="Dsk" /note="potential drosulfakinin signal peptide; putative" /db_xref="FlyBase:FBgn0000500" CDS 255..641 /gene="Dsk" /note="drosulfakinin precursor" /codon_start=1 /db_xref="FlyBase:FBgn0000500" /db_xref="PID:g157302" /translation="MPLWALAFCFLVVLPIPAQTTSLQNAKDDRRLQELESKIGGEID QPIANLVGPSFSLFGDRRNQKTMSFGRRVPLISRPIIPIELDLLMDNDDERTKAKRFD DYGHMRFGKRGGDDQFDDYGHMRFGR" mat_peptide 441..464 /gene="Dsk" /note="drosulfokinin DSK-0" /db_xref="FlyBase:FBgn0000500" mat_peptide 555..584 /gene="Dsk" /note="drosulfokinin DSK-I" /db_xref="FlyBase:FBgn0000500" mat_peptide 591..635 /gene="Dsk" /note="drosulfokinin DSK-II" /db_xref="FlyBase:FBgn0000500" BASE COUNT 253 a 160 c 169 g 201 t ORIGIN 3 bp upstream of the EcoRI site. 1 acgaattcaa ttattgtcag gacagcatca aagttagttt aatcaatcaa gtcaatcaca 61 agtcaaagtc aatttctgtt atctcaacac ctctaaacac ttgacagccg cggtaacgga 121 atattaaaca ggcgagaaag atggccacaa acgcaatcgt ataaaaagga agcgccaact 181 tagatgttca ccagtctgcc aagggcacag taaagcatgg gacctagaag ctgtacgcac 241 ttcgcacgct gtttatgcca ctctgggcat tagccttctg cttcctggtg gtgctgccga 301 tcccagcgca gacgactagt ctacagaacg ctaaggatga tcggcgacta caggaattgg 361 agtcaaaaat tggtggggaa atcgatcagc ccattgcgaa tttagttgga ccatcattct 421 ctctattcgg ggacaggcgt aatcagaaaa caatgagctt cggtcgcaga gtgccactaa 481 tttcacgccc aataatacca attgagctgg atctcctcat ggataatgat gacgaaagaa 541 cgaaagctaa gcggtttgat gattacggcc atatgaggtt tggtaaaagg ggaggtgatg 601 atcagttcga tgactacggt cacatgcgtt tcggccgata aacacttgcc atcagtttag 661 tcatttagaa aaccgattat gtatattgta catagaaatt aatcgagcac acattttata 721 ttaacaagta tataaaaagt aataaatgtt cgcattcaaa aatttaatat ttcgtattat 781 agc // LOCUS DROESCARGO 4106 bp DNA INV 10-AUG-1992 DEFINITION Drosophila melanogaster developmental escargot-encoded protein gene, complete cds. ACCESSION M83207 NID g157366 KEYWORDS developmental protein; escargot protein. SOURCE Drosophila melanogaster (strain Oregon R) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4106) AUTHORS Whiteley,M.H., Noguchi,P.D., Sensabaugh,S.M., Odenwald,W.F. and Kassis,J.A. TITLE The Drosophila gene escargot encodes a zinc finger motif found in snail-related genes JOURNAL Mech. Dev. 36, 117-127 (1992) MEDLINE 92239373 FEATURES Location/Qualifiers source 1..4106 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /map="chromosome 35Ce" gene 1007..2419 /note="escargot" /gene="esg" /allele="" /db_xref="FlyBase:FBgn0001981" CDS 1007..2419 /gene="esg" /codon_start=1 /product="escargot-encoded protein" /db_xref="PID:g157367" /translation="MHTVEDMLVEKNYSKCPLKKRPVNYQFEAPQNHSNTPNEPQDLC VKKMEILEENPSEELINVSDCCEDEGVDVDHTDDEHIEEEDEDVDVDVDSDPNQTQAA ALAAAAAVAAAAAASVVVPTPTYPKYPWNNFHMSPYTAEFYRTINQPGHQILPLRGDL IAPSSPSDSLGSLSPPPHHYLHGRASSVSPPMRSEMIHRPIGVRQHRFLPYPQMPGYP SLGGYTHTHHHHAPISPAYSENSYYSMRSMTPESSCSSSLPEDLSLKHKNLNLNLNTS QPGEQAAAKTGDMSPETMPNASAKKDKNQPPRYQCPDCQKSYSTFSGLTKHQQFHCPA AEGNQVKKSFSCKDCDKTYVSLGALKMHIRTHTLPCKCNLCGKAFSRPWLLQGHIRTH TGEKPFSCQHCHRAFADRSNLRAHLQTHSDIKKYSCTSCSKTFSRMSLLTKHSEGGCP GGSAGSSSSSELNYAGYAEP" BASE COUNT 1212 a 960 c 856 g 1078 t ORIGIN 1 ggatccataa tgaaagatgt taatatattt aatattgttt acttataaac ggggaataca 61 atatttctaa aactttttac gcaaaatcga ttgaatattg gttacttttg attccgtaaa 121 taacatactt gttaataaac aaatttagtg actacaatta ctacgttcct cctttctcct 181 gccaaaaaac attttattga tgcagaagtc tacctgctca ttaatgcatc gccctgtgtc 241 ctaaaaatgt tagtatttta tgttgggtac ctgcccatgt tttttgcgtt tcagttatta 301 agtcaactaa tgatgcacct gataatgata atgaggtaaa aggaaaccct tgttcgctaa 361 tcctccaaaa gtggggtttt tcgaatttct agttaaattt ctaggtaaga tcatagctct 421 ccttattgcg cattgaatgc aaatgcagag aggacgagag agagcagctg cggagagcac 481 gacgcacaca ggtaaacata tttgaatata tggcccacac tagagcaaat ataacggcat 541 cgcttcgttt gcggcttcga ttggtgcaag tgtacgagtt cggcacgtga ggcaattcta 601 cataaacaag gcgaaacctg tttagccgag tgtcgcgatt ggtcgacgca tatacctgaa 661 tgaacatgta tactctcgcg gaacgcccga gagagcgttc tcttttggca gcttcgtgta 721 atgagccgag tgccgagtgc aggggcagta taaaaaggcc gcaccaccgc caaactcgct 781 cagttattcc cagactctaa ccgattcaca taaccatctc tcccaacgca atatacccga 841 aatataaccg atattcaatc gctttgctta acggaacacg cgtttggtat ctgtgcatcg 901 atcgagtatt tgtgcctgtg tgaacatgac acactgaaaa caaagtgacg aaaattaaga 961 acattttaca acaattccgg taaactatca ataaaaagcc agtaaaatgc ataccgtgga 1021 agacatgttg gtggagaaaa actacagcaa gtgcccgcta aaaaagcgcc cagttaatta 1081 ccagttcgag gcgcctcaaa atcacagtaa caccccaaat gagccgcagg atttgtgcgt 1141 aaagaaaatg gaaattctgg aggaaaatcc ctccgaggaa ctgatcaacg tcagcgattg 1201 ttgcgaggac gagggtgtgg atgtggatca tacagatgat gaacacatcg aggaagagga 1261 cgaggacgtc gatgtggatg tggactcgga ccccaatcag acccaggctg cggctttagc 1321 tgctgccgca gctgtggccg ctgctgcagc cgcctccgtg gttgtgccca cgcccacata 1381 cccgaaatat ccatggaaca acttccacat gtcgccctac accgccgagt tctacaggac 1441 catcaatcag ccgggtcatc agattttgcc gctgcgtggc gatctcattg cgcccagttc 1501 gccgagtgac tcgctgggct ccctgtcgcc gccaccacat cattaccttc atggtcgcgc 1561 aagctccgtt tccccgccca tgagatcgga aatgatccat agaccaatcg gcgtgcggca 1621 gcaccgtttc ctgccctatc cccagatgcc cggttatccg agcttgggcg gctataccca 1681 tacccatcat caccatgcgc ctatctcgcc ggcttattcc gagaattcct actactccat 1741 gcgatcgatg acgcctgaat ccagctgcag ctcctcgctg cccgaggatc tatccctgaa 1801 acacaagaac ctgaacttga atctaaacac tagccagccg ggagagcaag cagcagccaa 1861 aaccggagat atgtcgcccg aaactatgcc gaatgcctcc gccaagaagg acaagaacca 1921 gccgcctcgt taccagtgcc cggattgcca gaaatcttac tccaccttct ccgggctgac 1981 caaacatcag cagttccatt gcccggccgc cgagggaaat caggtgaaga agtccttcag 2041 ctgcaaggat tgtgacaaga cctatgtttc gttgggtgcc ctcaagatgc acattcgcac 2101 ccacacgttg ccctgcaagt gcaatctgtg cggcaaggcc ttctcgcgac catggctgtt 2161 gcaaggacac attcgcactc atacgggaga gaagcccttc agttgccagc attgccaccg 2221 ggcctttgca gatcgctcga atctgcgagc acatctgcag actcactcgg acatcaagaa 2281 gtactcctgc accagttgct cgaagacctt ctcgcggatg tccctcctaa ccaagcattc 2341 agagggcgga tgtcctggcg gcagtgcagg atcctccagc agcagtgaac tcaactacgc 2401 cggctatgcc gagccgtaag gcaatatata tatatattta tatatacatt atatagctga 2461 gatcccagcc atgttccacc aaaaattagt tcctagctct cttaggcggc tccaagttcc 2521 cgaaactccc agtgcagaca cacaacttca agcagaattt cacttgtttt ttaatttcta 2581 gtcagcattt tctcccagaa gagagaaaat taaaaattac gttttaattt gtacaatccg 2641 gcaacattat cgtaaccacc accaccaatt tgaatagttt gaaccatttt agaatgtgtg 2701 cccataatat atcctaaaga tgaactttgt aaagtattct tcgatttatc ctgtacataa 2761 tgtattatgt ctaactgtag actctaagct gaacaaatga aacgccagac aatcaatcgt 2821 aagcaagaca tacatctcta tattttatac gatagtattt ttagcctagc tgtaaaaacc 2881 gtaaactatt tttgatatga ccactacttt ttcgcgtaca cattgaaaat gttctactgt 2941 agcttaagtg aagataagca aacaacacat acatatattt tgatacgaaa atgttttgta 3001 attctaagta atttattgca tcaagcgaag aaagaaggaa atacatttta tttacataca 3061 aaaaaaaaac attgaaaacg tttttatttc attaatgggt gggctttggg accttattat 3121 ttcaggataa tatgcaagtc gttctacaca aacttagaaa aaatctttta tttttctata 3181 tacggtaatt atgttaacaa tgttaacaat ttgatactcc tatatgccaa aacattgtta 3241 atttaatcat atttaagcat ggtattttca tatcaacttc agtggttaaa tcttataaca 3301 tttctggttt gcttatgtaa tatttgacat atttaaatgt acatatatac aaccttataa 3361 atatttatct gttgaatgct tagaccacat tttctattgt ccacattcaa ttaaaagtca 3421 attcctattt ccggcagaag gttcaatgga atctagaatg atcgtgagtg gtctcttcca 3481 gagttcgcca catatttggt tttattgggt catgttcttc ttcttcgaac aaataaacaa 3541 atcgaatcga gtggatcgga aaataagagc cgacccaatc agccattcgc gacattttat 3601 ggcccgctca gtgaagcaaa cgtaaggcgc attttctttg gcagactgat cataaattac 3661 atatatgtat gtatttaaat ttcggtgcac gtacggtgcg agcacaaaat ggcagtcact 3721 aaatcaaact tcaagcctca gtaggcccgc gccccggcca aaaagtcgta ttagacatga 3781 gccgcgatct taatgagaga gcagtgaaaa tagtgtcttg gcccggagat catcaagtgt 3841 gatcgatgcc taccagtatc cagccaagcg gaaaagcgca gggaaatcat aatcgtacgg 3901 taaggtatcg ttcgggtgac agagcatacg aaattatggg tgcgtcctct gaagccaaac 3961 gaaatgaaac gaaacgaaac gaaactcatt atcgagatca atcgatcgcc aggcggagga 4021 gagcctgctc cagaggccca caaatagcgc acacatgtgt gtggggatcg ggatcgggat 4081 tggcatgggt ttggggatgg ggatcc // LOCUS DROFAT 15966 bp DNA INV 19-DEC-1991 DEFINITION Drosophila melanogaster fat protein (fat) gene, complete cds. ACCESSION M80537 NID g157408 KEYWORDS cadherin; fat protein; transmembrane protein; tumor suppressor. SOURCE Drosophila melanogaster (strain Oregon R) embryonic and larval DNA; and Drosophila melanogaster (strain Canton S) embryonic and larval DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 15966) AUTHORS Mahoney,P.A., Weber,U.M., Onofrechuk,P., Biessmann,H., Bryant,P.J. and Goodman,C.S. TITLE The fat tumor suppressor gene in Drosophila encodes a novel member of the cadherin superfamily JOURNAL Cell 67, 853-868 (1991) MEDLINE 92069752 FEATURES Location/Qualifiers source 1..15966 /organism="Drosophila melanogaster" /strain="Oregon R" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="embryonic and larval" sig_peptide 193..279 /gene="ft" /db_xref="FlyBase:FBgn0001075" CDS 193..15636 /gene="ft" /note="cadherin-like protein" /codon_start=1 /product="fat protein" /db_xref="PID:g157409" /translation="MERLLLLFFLLLAGRESLCQTGDTKLELLAPRGRSYATTYEQYA AFPRRRSSSSSPSGEMQSRAVDTSADFEVLEGQPRGTTVGFIPTKPKFSYRFNEPPRE FTLDPVTGEVKTNVVLDREGMRDHYDLVVLSSQPTYPIEVRIKVLDVNDNSPEFPEPS IAISFSESATSGTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTS YLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYN VSLNETALPGTPVVTVMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCP QQTNVKSSASQKSCVFTVFARDHGSPRQDGRTYVTVNLLDTNDHDPIISFRFFPDGGK VATVDENAVNGTVVAAVAVKDSDSGLNGRTSVRIVSGNELGHFRLEEAADLHIVRVNG VLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAP TGSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDREIRDTVE LSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQTIVALMTAT DHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQYEIPVIARDQ GAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLTDDDDDIKLKKEVEKERILLHVT ASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSARDA GQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQVK STNGKANSHIEYDIIQGDRAQNFRIDTRSGRISTARPLDREEQANYRLTILASSSSSS SAAASSVSYGQCIVNIAIIDLNDNAPVFALDRESEPTISLPENAAVGQEIYLSRVRDR DAGVNSRISYSLTNNPNQQFRIGPVTGVLYLQRPIRAEPGSLIHVELMATDAGSPPLS SKLSLSVLIADVNDHTPVFDHTSYETSLPETTKVNTRFFALAATDIDLGDNGRISYEI IEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDE NDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDRDIGRNAELSFTLSSQTQDFTIDTR NGFIKTLRPFDREALVKVSRNAEASGEDGSLRGSMAGNYMLLEATVSDNGIPRLQDKV KVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHIMHVFTQDADEGLNGDVYYSLAKG NEAGQFNLDSATGQLSLARRLDRESQEIHHLIVVAKDAALKHPLSTNASITIVVLDEN DNAPEFTQSSSEVSVLETSPTGTELMRFRGSDADQGVNSQVVFSISAGNRRDTFHIDS ITGSLYLHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAI VRQIKEGIPLKTPIVTVTADDPDSGLNGKVSYAISKQEPQLPQGRHFGINTETGVIHT LREIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILP PKFSTSKGSSTAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQF KQEVRYQLTLKSTDEAVQSERRSSEVYITIITPGSGESESSVPQFEQRSKLSGSVYEN EPIGTSILTVTAHLASAEIEYFVTNVTAVGSRGQVDRLFDIDAKLGILSTAAELDREA GPEEYEVEVYAIALGGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTI STLRAHDPDTLGSVTFLLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRIRVSDG VQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADLGQNAQLS YGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILIVQAQDNGQPSLSTTITVYCN VLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKDIDSGNNGLIEYSITAGDVDSE FGIDSNGTIRTRRNLDREHRSTYTLTVTARDCADEFASFSELEETQLKLKYRSPRKYQ QTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKA VDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYLLNI TARDRGEPPQSTESQLLVRILDENDNSPVFDPKQYSASVAENASIGAMVLQVSATDVD EGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRYSLTVRAEDCALENPA GDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNGGYVLTVNAYDADTPPLNSQV RYFLKEGDSDLFRINASSGDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVE VQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRF HIDSETGEISTATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKF DSTTYNVAVPERISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVST KLELKTKTKSTDDLTYTIVISAMDQGEQSLSSKAELTVILRPPELFPTFAYMANSHFT MSEDVRPGKMITKVSATSPKKGLVGKIRYAIAGGIMGDSLRVDPNSGLLSVGQDGLDY ELTHLYEIWIEAADGDTPSLRSVTLITLNVTDANDNAPVMEQLIYTAEVLEEESPPQL IAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAV DQGVPHLTGTASVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSFVIRVTSSDLDLGAN ANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKVVASDGAWRAETPITIT IQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGPNSVISYSLQQPSPMF SIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAH NNPPKFEQAEYLAPLPQDAVRGQRIVRVHANDKQDLGTNEMDYSLMTFNLSSIFSVGR HDGWITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSY QVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQDFSVDERTGGIVIQQQL DYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVG TFVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTL QIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDK DSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLTVMAKNYGSIRG NDTDEAQVIISIQDGNDPPEFIKHYYTSTISEAAPVGTKVTTVKAIDKDVRTQNNQFS YSIINGNLKQSFKIDVQTGEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIE LEDVNDNGPTFTPEGLNGYISENEPAGTSIMTLMASDPDLPRNGGPFTYQLIGGKHKS WLSVDRNSGVVRSTTSFDREMTPVLEAIIEVEDSGKPKQKSQHLLTITVLDQNDNPST TRSLHIAVSLFNGDLPSNVKLADVRPNDIDIVGDYRCRLQKNPAQSQLQLAIPRACDL ITTSHTTPIASVFSYTGNDGKHGDVSSKVSVAFQSFNNETLANSVSIMVRNMTANHFL ANHYRPILEMIKSRMSNEDEVILYSLLEGGSGNSTNLQLLMAVRLAKTSYQQPKYLIE RLREKRSAFSELLQKEVIVGYEPCSEPDVCENGGVCSATMRLLDAHSFVIQDSPALVL SGPRVVHDYSCQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGK HCEKERSDVCYSKPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCESVSDSCRPNPCLHG GLCVSLKPGYKCNCTPGRYGRHCERFSYGFQPLSYMTFPALDVTTNDISIVFATTKPN SLLLYNYGMQSGGRSDFLAIELVHDRAYFSSGGARTAISTVIAGRNLADGGWHKVTAT RNGRVMSLSVAKCADSGDVCTECLPGDSSCYADEVGPVGTLNFNKQPLMIGGLSSADP ILERPGQVHSDDLVGCLHSVHIGGRALNLSSPLQQKGILAGCNRQACQPALAAERCGG FAGQCIDRWSSSLCQCGGHLQSPDCSDSLEPITLGEGAFVEFRISEIYRRMQLLDNLY NSKSAWLDNQQMRERRAVSNFSTASQIYEAPKMLSMLFRTYKDQGQILYAATNQMFTS LSLREGRLVYYSKQHLTINMTVQETSTLNDGKWHNVSLFSESRSLRLIVDGRQVGDEL DIAGVHDFLDPYLTILNVGGEAFVGCLANVTVNNELQPLNGSGSIFPEVRYHGKIESG CRGDIGQDAAQVADPLSIGFTLVIVFFVILVVAILGSYVIYRFRGKQEKIGSLSCGVP GFKIKHPGGPVTQSQVDHVLVRNLHPSEAPSPPVGAGDHMRPPVGSHHLVGPELLTKK FKEPTAEMPQPQQQQQRPQRPDIIERESPLIREDHHLPIPPLHPLPLEHASSVDMGSE YPEHYDLENASSIAPSDIDIVYHYKGYREAAGLRKYKASVPPVSAYTHHKHQNSGSQQ QQQQHRHTAPFVTRNQGGQPPPPPTSASRTHQSTPLARLSPSSELSSQQPRILTLHDI SGKPLQSALLATTSSSGGVGKDVHSNSERSLNSPVMSQLSGQSSSASRQKPGVPQQQA QQTSMGLTAEEIERLNGRPRTCSLISTLDAVSSSSEAPRVSSSALHMSLGGDVDAHSS TSTDESGNDSFTCSEIEYDNNSLSGDGKYSTSKSLLDGRSPVSRALSGGETSRNPPTT VVKTPPIPPHAYDGFESSFRGSLSTLVASDDDIANHLSGIYRKANGAASPSATTLGWE YLLNWGPSYENLMGVFKDIAELPDTNGPSQQQQQQTQVVSTLRMPSSNGPAAPEEYV" gene 193..15636 /note="fat" /gene="ft" /allele="" /db_xref="FlyBase:FBgn0001075" mat_peptide 280..15633 /gene="ft" /db_xref="FlyBase:FBgn0001075" /product="fat protein" BASE COUNT 4057 a 4138 c 4176 g 3595 t ORIGIN chromosome 24D. 1 aagcaacaat taccttaacc atagctaatt tcaatttcaa cttcttttcg ttgcaggcga 61 tagacgaaaa ttataagtga tgcaaaatga cgaattctac gatgcattca gagtgtgagc 121 aacaagacaa aagtgcgaca aatgaaagta gtgcaacata aatttagtac aaacattaga 181 aacagcctcc agatggagag gctactgctc ctgtttttcc tgctcctggc cggcagggaa 241 tccttgtgcc aaacaggcga caccaaactg gagctactgg caccgcgtgg ccgaagttat 301 gccaccacct atgaacaata tgccgccttt ccgcgaagaa gaagctcctc atcctcgcca 361 tcgggtgaga tgcaatcccg tgcggtggac accagtgccg atttcgaggt gctcgagggt 421 cagccgcgtg gaaccacggt tggttttata cccacaaaac caaagttctc ttatcgattc 481 aatgaacctc ctcgggaatt cacactcgat ccggtaacgg gtgaggtgaa gaccaatgtg 541 gtgctcgatc gggaaggtat gcgggatcac tacgatttgg tggtgctctc ctcacagccc 601 acctatccca tcgaggtgcg gattaaggtt ctggatgtca acgacaattc accggagttt 661 cccgaaccca gcatcgcgat ttccttttcc gaaagtgcca cttcgggtac tcgtttgctt 721 ctcgatgccg ccacagatgc ggatgttggt gaaaacgggg tgaccgatca gtatgagatc 781 gtggctggaa atgtggacaa caaatttcgg cttgtgacta cggcgaatcc cagtggagac 841 acctcgtatc tgcatctaga aaccacagga aatctcgacc gtgagtcgcg tggcagttac 901 caactaaaca tctctgccag agacggagga tctccaccgc gttttggcta cctccaagtg 961 aacgttacca ttctggatgt caatgataat ccaccgatct tcgatcacag cgattacaat 1021 gtatccctga acgaaacagc tctgccggga actccggtcg tgaccgtcat ggcttcggac 1081 aacgacttgg gggacaatag caagatcacc tactatctgg ccgaaacgga acaccaattc 1141 acggtgaatc cggagacggg agtcatttcc actacggaac gcgtgaactg cccccagcaa 1201 acgaacgtga agagctctgc tagccagaaa agctgcgttt tcactgtatt cgcccgggat 1261 catggatctc cacggcagga tggacgcacc tatgtaactg ttaatctgct ggacacaaac 1321 gatcacgacc ccatcatcag tttccgcttc tttccggatg gcggaaaagt ggccactgtg 1381 gatgagaatg cggtaaatgg tactgttgtg gcagccgtgg ccgttaagga ttccgattcc 1441 ggcctaaatg gcagaacatc ggtgcgaatt gtttccggca atgagctggg gcactttcgc 1501 ctagaagaag ctgccgactt gcatatagta agggtaaatg gagtcctgga tcgcgaggag 1561 atcgggaaat acaatctgac cgtggtggca atggatcaag gaacaccggc gcgaacgacc 1621 acggcacatc ttatcatcga cgtaaacgat gtgaatgatc atgaaccggt gttcgagaaa 1681 tcagaatatt cagcggtgct gagtgaactg gcacccacgg gaagttttgt ggcctcaatc 1741 actgccacgg atgaggatac tggggtcaat gcccaggtgc actatgatat tctctctggt 1801 aatgagctca agtggttttc catggatcca ctgacgggtt tgattgtgac tacgggtccg 1861 ttggacagag agattcgcga caccgtagaa ctgagcatct cggccaggga cggtggacct 1921 aatcccaaat ttgcgtacac tcagctgaag gtgatcattc tggacgagaa cgatgaggcg 1981 ccgcagttta gccaaaggga gcagaatgtg actttaggtg aggatgctcc tccgcaaacg 2041 attgtggctc tgatgacggc cactgatcat gatcagggca cgaatggatc ggtgaccttt 2101 gccctggcgc ccagtgtgga gcgcctgtat ccgctacagt ttgccctcga tgcgttgacg 2161 ggccaattaa caacgcgaag gcctctggat cgtgagaaaa tgtcacagta tgagatcccc 2221 gtgattgccc gcgatcaggg agcacccacg ccccaatcgg ccacggccac cgtttggctg 2281 aatgtggccg atgtaaacga taacgatcca cagttttatc ccaggcacta catctactcg 2341 ctcaccgatg acgatgatga tatcaagctc aagaaggagg tggagaagga gaggatcctg 2401 ctccatgtca cggcctcaga taaagacgat ggcgataatg ccttaattga gtacagactc 2461 gagtcaggtg gcgagggtct cttccagctg gacgcccgat cgggagccat cagcctgcgt 2521 ggtgatgctc ccgcatcgat gcattggaag ccacactaca agctcctcgt atcggcgcgt 2581 gatgctgggc aacggcggag ccagcaagat gccattgtag aaattgtgct caagtccaag 2641 ttggagatgc ttgaatgcgg tcaggcacaa gctggtggtt atgagttcca gatggtcgag 2701 gatcacgagc agcaaaggaa cagccaacca aatcgcgagg tgggcatcgt gcaggtaaaa 2761 tccacgaatg gcaaggcgaa ctctcatatc gaatacgata tcatccaagg cgacagggct 2821 cagaatttcc gaatcgatac cagaagtggt cgcatctcaa ccgcccgacc tttggatcgc 2881 gaggagcagg ccaattatcg tctgactatc ttggccagct ccagttccag ctcgagtgca 2941 gccgccagca gcgtttcata tggccagtgc attgttaata tagccattat cgatctgaat 3001 gataatgctc ccgttttcgc cttggatcgc gagtcagagc ccacaatctc gctgccggag 3061 aatgcggccg tgggtcagga gatctaccta tccagggtca gagatcggga tgcgggcgtg 3121 aatagtagga tcagctatag cctcaccaac aatcccaatc agcagttccg cattggaccg 3181 gtcacgggag ttctctacct tcagaggccc ataagagcag agcctggatc cctcatccac 3241 gtggaactaa tggccacgga tgcgggtagt cctccgctct ccagtaaact cagtctatct 3301 gtgctgatag ccgatgttaa cgatcacact cccgtctttg atcacacatc ctatgagact 3361 tccctcccag aaactacgaa agtgaacact cgatttttcg ctttggctgc tacggatatt 3421 gatttggggg acaatggacg gatctcgtac gagatcatcg agggcaacac tgagcgcatg 3481 ttcggtgtct ttcccgatgg ctatctgttt gtaagagctc cactcgatcg tgaggagcgg 3541 gattactatg ccctaactgt ttcttgccgg gatgctggtc aaccatccag atcttcggtg 3601 gttccagttg tcatccatgt catcgatgag aacgacaatg ccccacagtt cacgaacagc 3661 acatttacgt ttagtattcc ggaaaatgct cctgctgaca cgtttgtggg aaagctaacc 3721 gcagttgatc gggatatcgg aagaaatgcc gagctcagtt ttaccctgtc cagtcagacg 3781 caggacttta cgattgacac caggaatggt ttcataaaaa ctctgcgacc cttcgatcgc 3841 gaggctctgg tgaaagtcag cagaaatgcg gaggcaagcg gagaggatgg ttctctcagg 3901 ggttcaatgg ctggcaacta tatgctactg gaggccacag tttcggacaa tggcattcct 3961 cgcttacagg acaaagtcaa ggtgaaggtc atcgtcaccg atgtcaacga taatgcaccg 4021 gaattcctga gagcacccta tcatgttacc atttctgagg gcgcctctga gggcacgcat 4081 ataatgcatg tctttaccca agatgcggat gagggtctga atggagatgt atactactca 4141 ctggcgaagg gaaatgaggc tggtcagttc aatttggata gcgccacagg acagctttcg 4201 ttggcgcgca ggttggaccg ggagtcccag gagattcatc acctgatcgt cgtggccaag 4261 gatgctgctc tcaagcatcc gctgagcacc aatgctagca ttacaattgt ggttctggac 4321 gagaacgaca atgctccgga gttcacgcag tcgagcagtg aggtctcggt tttggagaca 4381 agtccaacgg gcactgaatt gatgagattc cgaggcagtg atgcggatca aggggtaaat 4441 agccaggtgg tcttcagtat atcggctgga aatcgccgtg acacattcca catcgacagc 4501 attacgggta gcctctatct gcacaaacct ctggactacg aggacataac cagctatact 4561 ctcaacatca ctgcctcaga ttgtggcact ccgtcgttgt ctaccaccgt tttgtataac 4621 gttctcgtcg tggatgacaa cgacaatccg cccatctttc ccagcactgc aattgttcgg 4681 cagatcaagg agggcattcc cctgaaaaca cccattgtga ccgtaaccgc cgacgatccg 4741 gattcgggac ttaacggcaa ggttagctat gccattagca agcaggaacc ccaacttcca 4801 cagggacgac actttggcat aaacacggag acgggtgtga ttcacacgct gagggagatt 4861 gatcgcgagt ccattgatac ctttcggcta accgtggtgg ccacggatcg tgctcagcct 4921 tcggagcgcc agctctcgac cgaaaaactg gtcaccgtga ttgtggagga cataaacgat 4981 aacgcaccag tttttgtgtc catgaatgcg gctatcctgc ctccaaagtt ctcgacttcc 5041 aagggcagca gcacagcggt gatgcaggtt catgccaagg atgcggactc gtccagcaac 5101 ggattggtga cctacgagat tgtcagtggc ccccaggagc tgttcaagct gcaaaggaac 5161 acgggtatca taacctttac cccaggtcct cagttcaagc aggaggttcg ctaccagctg 5221 acccttaagt ccaccgacga agccgttcaa agcgaacgtc gcagcagcga ggtctacatc 5281 acaatcataa cgccgggttc cggcgaaagt gagtcctccg ttccacagtt cgagcaacgg 5341 agtaagcttt ccggttccgt ctacgagaat gaaccaattg gaactagtat tctgacggtg 5401 accgctcatc tggcgtccgc cgagatagaa tactttgtga cgaatgttac ggcagtcgga 5461 tcgcgtggtc aagtggatcg cctcttcgac atcgatgcca agctgggaat tctgtccacc 5521 gccgctgaac tggaccgtga agccggacca gaggagtacg aggtggaggt gtacgccatt 5581 gcacttggcg gacagccacg tacatcccga acgaaggtca gagtaaccgt tctcgacaag 5641 aacgatagtc cgccgcagtt cctcgacaca ccgttcgtct acaatgtcag cgaggatcta 5701 cagattggac acaccatctc tacgctgcga gcccacgatc cggatacgct tggttcggtg 5761 acgttccttc tgatggatgg gcacgatggc aagttcctgc tggaaccgtc cactggaaaa 5821 ctgatcctca acgataccct cgatcgggag acaaagagca agtatgagct aaggattcgc 5881 gtatccgacg gagtgcagta cacagaggca tatgccacca tacaggtgag cgataccaat 5941 gataatccac ccttattcga ggataccgtg tactcctttg acataccgga aaatgcccaa 6001 cggggctacc aagtgggtca gattgtggcc agggatgccg atctgggcca aaatgcccaa 6061 ttgtcctacg gcgtggtctc ggattgggcc aacgatgtct tcagcctgaa tccacaaaca 6121 ggaatgctga ccctgaccgc gcgactggat tacgaagagg ttcagcacta tatcctgatt 6181 gttcaggcgc aggataatgg ccaacccagc ttgtccacca ccataacggt ctactgcaat 6241 gtcctcgatc tgaacgataa tgcacctatt ttcgatccca tgagctattc gagcgaggtg 6301 ttcgagaatg tgcccatcgc cacagaggta gtcactgtgt cagcaaagga tatagattcg 6361 ggcaacaatg ggctcattga gtacagcatc accgcaggag acgttgactc agagttcgga 6421 atcgatagca atggcactat acgcactcgc cgcaacttgg acagggaaca ccgatcgacg 6481 tacacactta cggttaccgc acgagattgt gccgatgaat ttgcatcctt cagcgaactg 6541 gaggagacgc agctgaagct caagtatcga tcgcctagaa agtaccaaca aacacgtcaa 6601 gagtttttgg cccatcaaaa gcagcagcgg ctctcctcga ctgtaaaggt gacgatactc 6661 atcaaagatg tcaacgacga agtgcccgtc ttcgtttccg caaacgaaac ggcgatcatg 6721 gagaacgtgg ccatcaatac ggtcgttatc gctgtcaagg ctgtcgacaa tgacgagggc 6781 cgcaacggat acatcgatta tctgatgaag gaggccagag atgaggacat gggtcaatcg 6841 gatccgctgc ccttctccct gaatcccacc gatggacagt tgcgcgtagt cgatgccttg 6901 gaccgtgaat tgcgctcaag ttatctgcta aacatcacag cccgagatcg tggagagcca 6961 ccccagtcca cggagtcgca gttgctcgtt cgaattctgg atgagaacga caatagtccc 7021 gtcttcgatc cgaagcaata ctctgcctcg gtggcggaaa acgccagcat tggtgccatg 7081 gtccttcagg tatccgccac ggatgtggat gaaggtgcaa atggacgcat ccgctattcc 7141 atagtgctgg gcgatcagaa ccatgacttc agcatcagcg aggatacggg tgtggtgcgg 7201 gtggctaaga acctaaacta cgaacgactt tcccgatact cgctcaccgt acgcgccgag 7261 gattgtgcct tggagaatcc tgctggcgac actgccgagc tgaccatcaa tattctggac 7321 ataaacgata atagaccgac atttttggat tccccatatt tggcacgtgt catggagaac 7381 actgtaccgc caaatggtgg atatgtgctc actgtaaacg cctatgatgc ggacactcca 7441 ccgcttaatt cgcaggtgcg ctactttctc aaggaaggcg atagtgatct cttccgcatc 7501 aatgcctcct cgggtgacat cgcgctgttg aaacccctgg atcgagagca gcagagcgag 7561 tacaccctga cactggtggc catggacacg ggttcgcctc cacttacggg cacgggaatt 7621 gtgcgagtgg aggtgcagga cattaatgac aacgatccgg tattcgaact gcaatcctat 7681 catgccactg tgcgcgagaa tttaccgtcg ggaactcatg tcctgacccc cagagcaacg 7741 gataaggacg aaggactaaa cgccaagctg cgctttaatt tgttgggaga gcacatgcat 7801 cggtttcaca tagattcaga aacgggcgag attagcacag ctacaactct cgatcgcgaa 7861 gagacttccg tgtaccactt gaccttaatg gcccaggata gctcgattac cgagccacga 7921 gcctcgtctg taaatctcac aatcagtgtg tccgatgtca atgacaatat cccgaaattc 7981 gattcgacca cctacaacgt agcagttccg gagaggatca gcaagggtga gttcgtgttt 8041 ggagctcgag ccttggactt ggatgatggc gagaatgctg tggtacatta cacgattagc 8101 gggcgagatc aacattactt tgatatcaac accaaaacgg gtgtggtgag caccaagctg 8161 gagcttaaga ccaagaccaa gtccactgat gatttaacct atacgattgt gatatctgca 8221 atggatcagg gcgagcaatc tcttagttcc aaggctgagc ttacagttat cctccgacca 8281 ccggagctct ttcccacctt tgcctacatg gccaacagtc actttaccat gtcagaggat 8341 gtaaggccgg gcaagatgat aaccaaagtc agtgccacat cgcccaaaaa gggtttggtg 8401 ggtaaaattc gctatgccat agccggcgga ataatggggg attctttgag agtggatccc 8461 aatagcggat tgctgagcgt tggtcaggat ggcctggact atgagttgac acatctgtat 8521 gagatttgga ttgaggccgc cgatggagac acgccaagtc tgcgtagtgt aactcttata 8581 acgctcaacg taacggatgc caatgacaat gctcccgtta tggaacagct catttacact 8641 gccgaggtcc tggaggagga gtccccacct cagttgatag ccgttgtgaa agccagcgat 8701 cgtgactccg gcgacaatgg aaatgtcatc tatcgcctgc agaatgactt cgacggcacc 8761 tttgagatca cggaatcggg tgagatttac accaggatgc gactggatcg cgaggagatt 8821 ggcgattatg cgttcgtagt ggaggccgtt gaccagggtg ttcctcattt gacgggaaca 8881 gctagtgtcc tactgcatct actggacaag aacgacaacc cgcccaagtt cacacgcctc 8941 ttttccctga atgtaaccga gaacgccgaa atcggtagct ttgtgatccg agtcacctct 9001 tctgatttgg atctgggtgc aaatgccaat gcttcttact ccttcagcga gaatcccggc 9061 gagaagtttc gcattgagcc gcagagtgga aacatcacag tggccggtca tcttgatcgc 9121 gagcaacagg atgagtacat cctgaaagtg gtggcctctg atggagcctg gcgtgccgag 9181 acacccatta ccatcacaat ccaggaccag aatgacaatg cccccgaatt cgagcatagc 9241 ttctacagct tcagtttccc ggagctgcag caatcgattg ctttggtggg ccagatcata 9301 gccacggatc gcgataaaca gggtcccaac tcagtgatct cctactcgct gcagcagccg 9361 tcgcccatgt tcagcataga tccagccacg ggtgaggtct tcagtaagaa ggcggttcgc 9421 ttcaagcact ctcagtacgt tcgctcaccg gagaacatgt acgccctcac cgttctggcc 9481 acggataatg gtaagcctcc tctgtactcc gagtgcctgg tgaacatcaa catcgtcgac 9541 gcccacaaca atccaccaaa gttcgaacag gcggaatatc tggcgccact gccacaggat 9601 gcagttcgtg gtcagcgaat agttcgggtc cacgcaaatg acaagcagga tctgggcacc 9661 aacgaaatgg actactcctt gatgacattc aatttgagtt cgatcttcag tgtcggcaga 9721 cacgatggtt ggattacttt ggtcaaaccc atccaagtgc cgccaaacac tcgatatgaa 9781 ctggttgtta gggccaccga tcgtggtgtt cctccccagt ccgatgagac acgagtcgtg 9841 atcgtggtaa ccggggagaa tatggacaca cccagatttt ccgtaaacag ctatcaagtc 9901 attgtgcccg agaatgagcc tgttgggtcc acaattctaa ctgtgggcgc cactgacgat 9961 gatacgggtc caaatggaat gctgcgctac tcgatttccg gtggcaatga gcgtcaagac 10021 ttcagtgtgg acgaacgtac gggtggcata gtgatacaac agcaattgga ttatgacctc 10081 atacaggaat accatttgaa tatcacagtt caggatctgg gctaccatcc actatcctca 10141 gttgcaatgc ttacgatcat tctgactgat gttaatgaca atccacctgt gtttaatcac 10201 aaggaatacc actgttatat acctgaaaac aaaccggttg gcacctttgt attccaggct 10261 catgccaccg ataaggattc accgaaaaat gctattatcc attatgcatt cctgcccagc 10321 ggaccggaca ggcacttctt cataatgaac cagagtaatg gcaccatttc ttcggcagtt 10381 tcctttgact atgaagagcg ccgcatctac acactgcaga taaaggcgaa aaatcccgat 10441 tcgagcatgg agagctacgc caatctctat gtgcatgtcc tgggcgtgaa tgagttttat 10501 ccacaattcc tgcagcccgt ctttcacttt gacgtatcgg aaacatcggc ggtgggcact 10561 agagtgggtg ccgtccaggc caccgataag gacagtggcg aagatggacg tgtctactac 10621 cttctggtgg gttccagtaa cgacaagggt ttccgcatcg ataccaatac gggcttgatt 10681 tatgtagccc gacacttgga cagggagaca cagaaccgtg tggtactcac agtgatggcc 10741 aaaaactatg gcagtattcg tggtaacgac actgacgagg cacaagtgat tatatcgatt 10801 caggatggca acgatccgcc ggagttcata aagcactact atacctccac gatttccgag 10861 gcagctccgg ttggcacgaa ggtcacaacg gtcaaggcta ttgacaagga tgtgcgcaca 10921 caaaataatc agtttagcta ttcgatcatt aatggcaatc taaaacaaag ctttaagata 10981 gatgtgcaaa cgggtgagat tagcacggca agtcgtttgg atcgtgagga gacatccacc 11041 tataacttgg tgattggagc cattgacacg ggactgcctc cacagacggg aagtgcaacg 11101 gtgcatatcg aactagaaga tgtgaacgat aatggaccca cattcacacc tgagggtctg 11161 aatggttata tctccgagaa tgaaccggct ggcacttcca ttatgacact aatggccagt 11221 gatccggatc taccgcgcaa tggaggaccc ttcacctatc agttgattgg tggtaagcac 11281 aagtcctggc taagtgtgga cagaaactct ggtgtggtta ggtccactac cagtttcgat 11341 cgcgaaatga caccagttct agaggccata attgaagtcg aggacagtgg aaagcccaaa 11401 caaaagtccc agcacctgct cacgatcact gtattggatc agaacgataa tccatcgacc 11461 acaaggagct tgcacatagc tgtcagtctg tttaacggcg atctgccttc gaatgtgaag 11521 ctggccgatg tgcgtcccaa tgatattgac atcgtgggcg attatcgttg tcgcctccag 11581 aagaatcccg cccagagtca actgcagttg gctattcctc gggcctgtga tctgatcacc 11641 acctcacata cgacgccaat agcttcggtt ttcagctata cgggaaatga cggaaaacat 11701 ggagatgtta gctccaaagt tagtgtcgcc ttccagagtt ttaacaacga aacattggcc 11761 aactcagtgt ccatcatggt aaggaatatg acagctaacc acttcttggc taatcactat 11821 cgaccaattc tggagatgat taagtctaga atgagtaacg aggatgaggt cattctatat 11881 agtcttctag agggtggcag tggcaattcc accaatctcc aactgctaat ggcagtcaga 11941 ttggcgaaga ccagttacca acaacccaaa tatttgattg aacgcttgcg agagaagcgt 12001 tcagcgtttt cggaactcct gcaaaaggag gtgattgtgg gctatgaacc ctgcagtgaa 12061 ccggatgttt gtgaaaatgg cggagtctgc agtgccacca tgcgactgct ggatgcccat 12121 agctttgtta tccaagacag tccggccttg gtgctgagtg gtcctcgggt tgtgcacgac 12181 tacagctgcc agtgcaccag tggattctcg ggcgagcagt gcagtcgtcg gcaggatcct 12241 tgcctgccca atccttgcca ttcgcaggtc caatgccgtc gcctgggtag cgatttccag 12301 tgcatgtgtc ctgccaatcg ggatggcaag cactgcgaga aggaacgcag tgacgtgtgc 12361 tatagcaagc cgtgtcgcaa tggaggaagt tgccaacgca gtccggacgg atcctcctac 12421 ttttgcctat gtcgtcccgg attccgtggc aatcagtgcg agagcgtgtc ggactcatgc 12481 cgacccaatc cctgtctgca cggtggcttg tgtgttagtc tcaagccagg atacaaatgc 12541 aactgcacgc cgggacgata tggacgacat tgcgagcgtt ttagctatgg attccaacca 12601 ctgtcctaca tgacttttcc cgctctggat gtgaccacca atgatatatc cattgtgttc 12661 gccacgacga aacccaactc cctattgcta tacaactacg gaatgcagag tggcggcaga 12721 tccgacttct tggccatcga actggtgcac gacagggcgt atttctcatc tggtggagct 12781 cgtactgcta tcagtactgt gattgctgga cgaaatctgg ctgacggtgg atggcacaag 12841 gttacggcca cccggaatgg acgtgtgatg tcactcagcg tggccaagtg cgcggattcc 12901 ggtgacgttt gtacggaatg cctgcccgga gactctagct gctatgcgga cgaagtggga 12961 ccagtgggaa ctctcaactt caacaaacaa cccctgatga tcggtggctt gtcctcggct 13021 gatcctatct tggagcgacc tggtcaagtg cacagtgatg atctggtggg ctgtctgcac 13081 agtgttcata tcggaggacg tgccctgaac ctcagttcgc cgcttcaaca gaaaggcatt 13141 ttggccggat gcaatcggca ggcgtgtcaa ccagctttgg ccgccgaacg gtgtggagga 13201 ttcgctggac aatgcatcga tcggtggtcc agttcgctat gtcagtgcgg cggacactta 13261 cagtcgcccg attgctcgga ctccttggaa cccatcaccc tgggcgaagg tgcctttgtg 13321 gagtttagaa tttcggaaat atatcgtcgc atgcagctgc tggacaatct gtataacagc 13381 aaaagtgcct ggctggataa ccaacagatg agagaacgtc gagccgtaag caatttcagc 13441 acagcttccc agatctacga ggctccaaag atgcttagca tgctgttccg cacctataag 13501 gatcagggtc agatccttta tgcggccacc aatcaaatgt ttacctcact gtccctgcgc 13561 gagggtcgtc tggtttacta ctccaaacag catcttacca tcaatatgac ggtgcaggaa 13621 acttctacgc tcaacgatgg caagtggcac aatgtgagct tgtttagcga gagtcgaagt 13681 ctgcgactca ttgtcgatgg aaggcaagtg ggtgatgagc tggatattgc cggggtgcac 13741 gacttcctcg atccctattt gaccattctg aatgtgggtg gcgaagcatt tgttggttgc 13801 ctggccaatg tgacggtgaa caacgaactg cagccgctaa acggatcagg cagcatcttt 13861 ccggaggttc gttatcacgg caagattgag tccggctgca gaggagacat tggccaagat 13921 gccgcccagg tggccgatcc tctcagcatt ggcttcaccc tggtcattgt cttcttcgtc 13981 attctggtgg tggctatact gggctcctat gttatctatc gattccgcgg aaagcaggag 14041 aagattggta gtttgagttg cggtgtgccc ggcttcaaga ttaagcaccc tggtggtcca 14101 gtgacgcaga gtcaggtgga tcacgtcttg gttcgcaatc tgcatcccag tgaagccccg 14161 tcaccgccag ttggagctgg agatcatatg cgaccgccag tgggtagcca tcacctggtg 14221 ggtcccgaac tattgaccaa gaagtttaag gaacccactg cggagatgcc acagccgcag 14281 cagcagcagc aacgtcccca gcgacccgat atcatagagc gcgagagtcc tctgataagg 14341 gaggatcatc acctgcccat tccgccgctc catcctcttc cgctggagca cgccagttcc 14401 gtggacatgg gttccgagta cccggaacac tacgacctcg agaacgccag ctccattgct 14461 ccgtccgaca ttgatatagt ctatcattac aagggctatc gtgaggctgc tggcctacgc 14521 aaatacaagg ccagtgttcc acctgtttcc gcctacacgc atcacaagca tcagaactct 14581 ggctctcaac agcagcagca gcagcaccgc cacacagctc cctttgtgac ccggaaccaa 14641 ggtggccaac cgccaccgcc gcccaccagt gcatcccgca cccatcagag cactccactg 14701 gcccgactct cgcccagctc ggagttgagt tcccaacagc cgcgcattct aactttgcac 14761 gacatttccg gaaagccgct gcaaagtgcc ctgctggcca ccacctccag ttccggtggc 14821 gttggcaagg acgttcacag caacagcgaa cgcagtctga acagcccggt tatgtcgcag 14881 ctgtccggcc aaagttccag tgccagcagg caaaagcccg gagtgccaca gcagcaggcg 14941 cagcaaactt ccatgggctt gaccgccgag gagattgaga gattgaatgg cagaccacga 15001 acttgtagcc taatctccac cctggatgcc gtctcctcca gcagtgaggc gcctcgagtg 15061 tcgagcagcg ctctgcatat gtcgctgggt ggagatgtgg atgcccatag ttcgacttcc 15121 acggacgaaa gcggcaacga cagcttcacg tgctcggaga tcgagtacga caataacagt 15181 ctcagtggcg acggcaagta ttccaccagc aagagtctcc tcgatggacg cagtcccgtg 15241 tccagagcac taagcggtgg tgagacgagc agaaatccac cgacaactgt ggtcaagaca 15301 ccgcccattc cgccgcacgc ctacgatgga ttcgagtcat catttcgcgg atcgctcagc 15361 acgctcgtgg ccagcgacga tgatatagcc aatcacctga gcggtatcta ccgcaaggcc 15421 aatggagccg catccccatc ggccaccacc ctcggctggg agtatctgct caattgggga 15481 cctagctacg aaaatctgat gggcgtcttc aaggacattg ccgagctgcc ggacacaaat 15541 ggaccgtcgc agcaacagca gcagcaaacc caagtggtgt ccacgctacg aatgccatca 15601 tcgaatggac cggcggctcc agaggagtac gtgtaatata tgttgtgtat gctcttcaac 15661 gaaagttaaa gtgttcctaa agtctgagcc ccaattcact gcaagcacat aacaaaaaaa 15721 cttgaaacta ttcaatgact tttccgagat ttcgtgtggt caaaaacaaa gagagaaatt 15781 ctcgatagta cgtaaatgta tttgtaaatt ttgtgtaaag ctatatcatt tcatagtaga 15841 tcctaagtaa tgccatttta ttttgcaatg tacaacgaaa acgtaacgag gataggtagt 15901 aagttaaaca aagtgtagaa tcgtgcatat gtcggaaaat aagcaactaa tcttatgaga 15961 acgcct // LOCUS DROFMRFA2 1603 bp DNA INV 15-JUN-1990 DEFINITION D.melanogaster FMRFamide neuropeptide gene, exon 2. ACCESSION M32641 J05415 NID g157439 KEYWORDS FMRFamide neuropeptide. SEGMENT 2 of 2 SOURCE D.melanogaster (strain Canton S) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1603) AUTHORS Schneider,L.E. and Taghert,P.H. TITLE Organization and expression of the Drosophila Phe-Met-Arg-Phe-NH2 neuropeptide gene JOURNAL J. Biol. Chem. 265, 6890-6895 (1990) MEDLINE 90216720 COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by L.E.Schneider, 07-MAR-1990. FEATURES Location/Qualifiers source 1..1603 /organism="Drosophila melanogaster" /db_xref="taxon:7227" prim_transcript <1..1538 /gene="Fmrf" /note="FMRFamide neuropeptide mRNA and introns" gene 1..1603 /note="FMRFamide-related" /gene="Fmrf" /allele="" /db_xref="FlyBase:FBgn0000715" intron <1..219 /gene="Fmrf" /note="FMRFamide neuropeptide intron" /db_xref="FlyBase:FBgn0000715" sig_peptide 220..291 /gene="Fmrf" /note="FMRFamide neuropeptide signal peptide" /db_xref="FlyBase:FBgn0000715" CDS 220..1263 /gene="Fmrf" /note="FMRFamide neuropeptide precursor" /codon_start=1 /db_xref="FlyBase:FBgn0000715" /db_xref="PID:g157441" /translation="MGIALMFLLALYQMQSAIHSEIIDTPNYAGNSLQDADSEVSPSQ DNDLVDALLGNDQTERAELEFRHPISVIGIDYSKNAVVLHFQKHGRKPRYKYDPELEA KRRSVQDNFMHFGKRQAEQLPPEGSYAESDELEGMAKRAAMDRYGRDPKQDFMRFGRD PKQDFMRFGRDPKQDFMRFGRDPKQDFMRFGRDPKQDFMRFGRTPAEDFMRFGRTPAE DFMRFGRSDNFMRFGRSPHEELRSPKQDFMRFGRPDNFMRFGRSAPQDFVRSGKMDSN FIRFGKSLKPAAPESKPVKSNQGNPGERSPVDKAMTELFKKQELQDQQVKNGAQATTT QDGSVEQDQFFGQ" mat_peptide 527..570 /gene="Fmrf" /note="FMRFamide neuropeptide A" /db_xref="FlyBase:FBgn0000715" mat_peptide 571..663 /gene="Fmrf" /note="FMRFamide neuropeptide B" /db_xref="FlyBase:FBgn0000715" mat_peptide 664..696 /gene="Fmrf" /note="FMRFamide neuropeptide C" /db_xref="FlyBase:FBgn0000715" mat_peptide 697..729 /gene="Fmrf" /note="FMRFamide neuropeptide D" /db_xref="FlyBase:FBgn0000715" mat_peptide 730..762 /gene="Fmrf" /note="FMRFamide neuropeptide E" /db_xref="FlyBase:FBgn0000715" mat_peptide 763..795 /gene="Fmrf" /note="FMRFamide neuropeptide F" /db_xref="FlyBase:FBgn0000715" mat_peptide 796..828 /gene="Fmrf" /note="FMRFamide neuropeptide G" /db_xref="FlyBase:FBgn0000715" mat_peptide 829..861 /gene="Fmrf" /note="FMRFamide neuropeptide H" /db_xref="FlyBase:FBgn0000715" mat_peptide 862..894 /gene="Fmrf" /note="FMRFamide neuropeptide I" /db_xref="FlyBase:FBgn0000715" mat_peptide 895..921 /gene="Fmrf" /note="FMRFamide neuropeptide J" /db_xref="FlyBase:FBgn0000715" mat_peptide 922..954 /gene="Fmrf" /note="FMRFamide neuropeptide K" /db_xref="FlyBase:FBgn0000715" mat_peptide 976..1002 /gene="Fmrf" /note="FMRFamide neuropeptide L" /db_xref="FlyBase:FBgn0000715" mat_peptide 1003..1035 /gene="Fmrf" /note="FMRFamide neuropeptide M" /db_xref="FlyBase:FBgn0000715" mat_peptide 1036..1065 /gene="Fmrf" /note="FMRFamide neuropeptide N" /db_xref="FlyBase:FBgn0000715" polyA_signal 1482..1487 /gene="Fmrf" /db_xref="FlyBase:FBgn0000715" polyA_signal 1507..1512 /gene="Fmrf" /db_xref="FlyBase:FBgn0000715" BASE COUNT 409 a 398 c 431 g 365 t ORIGIN Undetermined number of bp after segment 1. 1 gcggctggtt aacttttaac gcgccggccc aacagatctg gccataaata tcatgatggt 61 taattagcag gacactttgt ctgcgcgtcc tggctgccgg tggctactgt taccctaagt 121 aaaacgaacg gtcttaatgt gattaaaagt tgcaatagat aacgcgagat gccgccgcct 181 cataattatc ctgccgtcac tccattctta tccttgcaga tgggcattgc cttgatgttc 241 ctgctggccc tgtaccagat gcagtcggcc atccacagcg agatcatcga tacgcccaac 301 tatgcgggca actcgttgca ggacgctgac tccgaggtga gtccatcgca ggacaatgac 361 ctggtagatg cactgctcgg caacgatcag accgagaggg cggagctgga gttccggcac 421 cccatctctg tgattggcat cgactactcg aagaacgccg tggtgctgca cttccagaaa 481 cacggccgga aaccgcgcta caagtacgat cccgagctgg aggccaagcg aaggtccgtg 541 caggacaact tcatgcactt cggcaagagg caggcggagc agctgccacc ggagggcagc 601 tatgctgaat ccgatgaact ggagggcatg gccaagcgag cagctatgga tcggtatggc 661 agagatccca agcaggactt catgcggttt ggtcgggatc cgaaacagga cttcatgagg 721 tttggcaggg atccaaagca ggacttcatg agattcggtc gggatcccaa gcaggatttc 781 atgagattcg gtcgagatcc caagcaggat ttcatgaggt ttggacgcac tccggctgag 841 gatttcatga ggttcggacg cactccggcg gaggacttca tgaggttcgg acgctccgac 901 aatttcatgc gcttcggacg cagtccccac gaggagcttc gcagtcccaa acaggatttc 961 atgcgattcg gtcgcccgga caacttcatg cgcttcgggc gttccgctcc gcaggatttt 1021 gtgcgctccg ggaagatgga ctcaaacttc attcgattcg gtaagagctt gaagccggcg 1081 gctcccgagt ccaagccagt caagtccaat caaggcaacc caggcgaacg cagtccagtg 1141 gacaaggcca tgacggagct gttcaagaaa caggagctgc aggatcagca ggtgaagaac 1201 ggcgcacagg cgaccaccac gcaggatggg agtgtggaac aggaccagtt cttcggccag 1261 tgaggtagtc ctgcgggacg cctccttgta aatagatatg gacaaatgta cgcaaggatc 1321 taaattgata tacgtatata acccactcct cacacgaact cctgacttat gcctgaacta 1381 tgaattttta atgaatgggc tggattaaaa attcaccgtg ctttgaagtt cttatctata 1441 aatatatcta gtgtaatatt gaagaaattg aaattggcgt gaataaaatc ctgtggcaac 1501 attttaaata aagattgctt tactgtaaat tatggcgcac tcgaatagcc ttatttcatt 1561 cggtcgaggt acatattgta tagccattat tagtttctcc act // LOCUS DROFREQ 5682 bp DNA INV 29-SEP-1993 DEFINITION Drosophila melanogaster frequenin gene, complete cds, introns in coding region excluded. ACCESSION L08064 NID g404034 KEYWORDS calcium-binding protein; frequenin. SOURCE Drosophila melanogaster (strain Oregon R) (library: EMBL4; EMBL13; NM1149) embryo DNA; and Drosophila melanogaster (strain Canton S) (library: Charon) embryo DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 5682) AUTHORS Pongs,O., Lindemeier,J., Krah-Jentgens,I., Theil,T., Engelkamp,D., Lambrecht,H.G., Koch,K.W., Schwemer,G., Mallart,A., Calceran,J. and Ferrus,A. TITLE Frequenin--a novel calcium-binding protein that modulates synaptic efficacy in the Drosophila nervous system JOURNAL Neuron 11, 15-28 (1993) MEDLINE 93332694 FEATURES Location/Qualifiers source 1..5682 /organism="Drosophila melanogaster" /strain="Oregon R" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="embryo" /tissue_lib="EMBL4; EMBL13; NM1149" /tissue_lib="Charon" gene 1..5682 /note="Frequenin" /gene="Frq" /allele="" /db_xref="FlyBase:FBgn0004120" exon 1..226 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=1 exon 227..365 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=2 exon 366..597 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=3 CDS 535..1098 /gene="Frq" /codon_start=1 /db_xref="FlyBase:FBgn0004120" /product="frequenin" /db_xref="PID:g404035" /translation="MGKKSSKLKQDTIDRLTTDTYFTEKEIRQWHKGFLKDCPNGLLT EQGFIKIYKQFFPQGDPSKFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQ WAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQKRVDKIFDQMDKNHD GKLTLEEFREGSKADPRIVQALSLGGG" exon 598..623 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=4 exon 624..672 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=5 exon 673..762 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=6 exon 763..841 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=7 exon 842..930 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=8 exon 931..>1095 /gene="Frq" /db_xref="FlyBase:FBgn0004120" /number=9 BASE COUNT 2206 a 1165 c 904 g 1407 t ORIGIN 1 ttcagtcgct gatttgaccg ccaaacaaac gcaacgcagc tcggcaggtt tttaagttta 61 caatcaaatc gctggttcgc aacgacaaca acaaaaggac aaagcgcgct ctccggtcca 121 cggaaatcga caacaactac agcaacggca acaacaacat tagccgccag tggcagcaac 181 aaacaaccaa caataacaac aaaataaagc cattacctaa atagttggtt tgttttcctt 241 ttttttccaa gttccaatcc tgcaaaatag ttgacatttt tttttcggtt aaataatacg 301 aacgtcaagc aaacaaagca aaaataataa attataaaaa cgaaacaaat acgacaaaca 361 aaaaacaact acaaaattgc aaagtaaaac gaacttgcgc agcgcaaaaa agtttgccac 421 taaaaagcaa tagcagtcaa gtgcaacaac aacaaataac aaataacaac aacaacaaca 481 agaggtagaa caacaacagc aacaacaact agggagccac aacaagagaa caacatggga 541 aaaaagagct ccaagttgaa acaggatacc atcgatcgct taacaacgga cacatacttc 601 acagagaaag aaatacgtca atggcacaaa ggattcctga aagactgccc caacggcctg 661 ctcacggagc aaggcttcat caaaatatac aaacaattct ttccacaagg cgatcccagt 721 aaattcgcat cgctcgtctt tcgcgtcttc gatgagaaca atgatggctc cattgagttt 781 gaggagttca tacgcgcctt atccgtcaca tcgaagggca acctggacga aaaactgcag 841 tgggccttcc gtctctacga tgtggacaac gatggttaca taacgcggga ggagatgtac 901 aacatagtgg atgcgatcta ccagatggtg ggacagcagc cgcaatcgga ggacgagaac 961 acgccgcaga aacgagtgga caagatcttc gatcagatgg acaaaaacca cgatggcaaa 1021 ttaacattag aagaatttcg tgagggtagt aaagctgatc cacgtatagt tcaggcgtta 1081 agtttaggtg gtggttaaat cgattaacaa tggccgatta ccgataacag acccaattcc 1141 aattccacaa aaaccaagcg cgcaataaac tgaaataaaa agatattgat actgcaagtt 1201 gatcgaaacc cgcttaaaca aaaaaaaaaa aaaacaacaa attaaataaa aaagtatgga 1261 agtttgtggg tgggggcagg ctggtacggt gccacgcccc ctgccgcttc gtttgcattc 1321 gcttctccac tcttcacttt ctcttctctc cacgcttttc tcaattctca attcttgatt 1381 ctcgattctc cgcgcgtcgc ttgcgacact gaagatgata ataatttttt gatatatgga 1441 taaagaataa ctaacgagat ggaaatccaa acaaacgaac cgaaaagaaa tgaaaatgaa 1501 aagaaaaaac aaaaatcgaa aaaataccga aaatgaaatt aatttttaaa tatacaccag 1561 aatataaata tataggaaat catggcgtag tcagagcgca gttcatagca ataatggaaa 1621 aacaaaacga agaaaaaaat gtcgaaagat aaataaacta atactaattt taaattaaat 1681 cgaatggcgc ggaggcgcaa atcaattttt gaagcataca ccaattacga gtaaactaat 1741 taaacctacg attaaatcag cataactata ctaaacaatt aaacgataca attagagccg 1801 aactaagcct acgcatcaat tgtgcagcct tcgaagcaaa gcgagttata taaactcgat 1861 ccgagtcagc taattccact cacgacagcc aacagcagcc actatatcca cacttaatat 1921 atatatatat atacatatag atacagtatc aatccgataa gtggccgcag acaggacgaa 1981 cagagttcag agttcacagt ttagagggcg tcgcacagca gaggggagct agcttgaaaa 2041 tatcataaaa atgaaacact ttaacgatta cgagagatac ttacacatat tacccacttc 2101 caagtacatt cactttggct tatttgaata atcgaagatg aggtataatg agattacatc 2161 acttaatact ttctgattac catcaatact aacacgccca taaattagtg ccagtgtcga 2221 tttgatcact taattgcggc aacactcaag tttttgcaag tgcatgtaaa aggaatgctt 2281 agctagaagg tctctctgtt cataggaaat ttccttttat tccaatcact tcggtacccc 2341 aacttccgat attcgttggc ttttattgac caggacttgt ttgagaaatg aaagaggatt 2401 tatgagcaag ttccataacc aaccagcacc agcagaagtg tgtttatttt caggctcaaa 2461 tgcgaggcaa tccatgtact ttcaagccag ctgccttgca gtcatgaaac gcaccttgat 2521 cggcttgtat gcagctcccc tgcgaaaaga gattaaatct gcagatgagt ttcgccagcg 2581 tacaaatagt gttgcatacc caacaggcgc agaaaagtgt ttgctttcgt ttgctcgctc 2641 gcaatctctc tctctctctc tctctctctg tctctttcta cctctatcta tatttctttc 2701 cctctctcca tctctctctc tctatctgta tattctgctt tgccttgttt tccgttaagc 2761 gttatacgtt cccaacaaca ataaccaatc caaaccaaac caaaaccaaa ccatatttac 2821 aataacaaca ataacaacac gaacatattg acaataggcg gagcaggatg agcaaagaaa 2881 aaggatatcc aaaggtcttg agaacagtgc ccagaaatcc atgaatccat gaacccatga 2941 accacagctc cagaagtcca gaaatagctg cgaagtgaag acattaataa atgataaact 3001 aatcaaagaa cgcacagcta caaccagagc cacatcaaca gccagaacat gaacatatat 3061 atatatatat acacaaatgt atatccaata tcctcgagac gcagcagaag catggaagtt 3121 ggagcagtta ggatatatat atatagatat atatatatac gagtataaca atgaaacaaa 3181 tccatcatac gatttaattt ctattctata tgcggttcag ctttattatt gcattgattt 3241 ttcaataaac cagtcaaccg ttttactatt ccgatgacta tctataaata ctgaatctcc 3301 cgctttctca cgccccccac caccccctgc caaaaaaaaa aaaaaagtac aacccgttta 3361 gtcgcctttg tgtaatctag atctagggag atttcggact ccctgaaaac acacaagcac 3421 taacactcac ccaaacacac acacacacac actcacacgc taacacacat actgtatatc 3481 tatatagtgc ctatgtatgt agtagtattt cttatgattt cgcctgcttt gccttctttg 3541 agaacgaaca ttcccaattg atcgatttac gtttatcttt tcctatgctt tccatgtatt 3601 taatcaccga tctaaaagaa taaatacgat acaaattcaa aagtcaaatg ccgtgcaatc 3661 caaacacttt accccaaaca cacacacaca cacatagcca catgtatgta tatataaata 3721 tatatatata tatatgtgtg tatgcctaaa cttatatata ctctatatag taagcacagc 3781 aatcgaaagc aagttaagga actataaaaa aaaaaccaaa aatcgaatac aaaaacgctt 3841 ctataaacct cactgaaatt cttcgaagaa acaaactgaa agatacagat atagtacaca 3901 cacacacaca tacgcaaact gacacacacc cacactcaca gacaaacaca cactgtacga 3961 gtatattaac aataaacgta atgcgaaaat taatcaataa ttaaataatt cgaaagtgat 4021 atagctgaca aaacaaatgt gtctgtagta gtctagtagt taaaagaaat tgaaacgaat 4081 cgaaacgaaa cgaaaaaaaa aagaaattta taaataatat taactaaact attatatgtg 4141 acagattaaa ttggaggcga cggggaaaac gcaacgcaat tttcacgttg accgctcttt 4201 tttttttgaa agcaggcggc tgaggcggaa ataagaaaat caaattgtaa ataacactaa 4261 gtgaatcacg cacaccacac caagacacac cctcacacac acacacatac acaaacacac 4321 atacccacgc gcatacccac ttgcacactg acagaaacga ggagtaccga ataagtttgt 4381 taacaccaaa atataacggg tcttaagtaa cgaaaaataa ttataataat aatgcgaaaa 4441 atgcaaatat gcaaaaatgc agcagagaag taaaatcata aaaacagtaa gttagagcaa 4501 ggaatttttt ttgtggatcg aattggatgg gtttgcaatg aatcaagtca attgtaatag 4561 ccgacaaaaa aagaatacga gaattatgaa atatttatat taatttacaa tgggccggcg 4621 agtgaagctt ttcccgcaaa aacactgaaa agcagtgaaa aacagtgaaa agcagtgaaa 4681 aaccagtagc agaagtcgaa gatgagtttc tttccaccgc cgttgacaaa ccacacgaat 4741 gtcaagttaa acgtttcaca agcaatattt tacatactta tacatgcatt atatacacat 4801 atatacttat atatatatat atatatatat gggtaaatat atatataaat aaatatacga 4861 taataaatat atacataact tatatacaca ctccgcaata acgagtcgac cggctaaata 4921 gacataataa ctataataaa atattgcatg gcagatacac agatatccaa agcgaaatgt 4981 ctgataatgc gtaaatagga gtttaaatca gatgatagcg gcagatagtg gggaattaat 5041 aacattttta gtgatattct ttagcaaact tgaatctgat ttccttgcta agaacaaaac 5101 gaaatgtata aagtcgcaaa gaattcaaaa ccaaagccga aaatgtaacg aaaataacat 5161 cagtttaagc aaaaggtcgt atattttaca acaaaaaaaa aaaaaaaaaa aaccaaacaa 5221 aaacaaaagc aaccaaacaa acaaaacgaa atgaaatgat atgctaaaaa agcgaaaaaa 5281 aaacaacaaa aaatgaaacc aatttttttc tcccatttac cttgactcga ctttcatttt 5341 gttcgatata tcctgtgtac tgctctattt gcctttacct accatcatta ttatgtcgat 5401 tgttattatt atgattatat ggcaacgtcg atgataacaa ttattgtgta aaccaaaaca 5461 acacacatgc aaaacgtata agaaacatga aaacatgaac atgaaatgaa aactttatag 5521 aacatacaaa tgaaaatcaa attcttttac caaggaagaa acttaattat tttttttttt 5581 ttagtaatcg cctaaggggg aatggaaaat ttatcttgtt actgtcaaac aaatattact 5641 tacttcaaat aaaaatttta aagcgagcac catcgttacc at // LOCUS DROGADPH1 2141 bp DNA INV 01-SEP-1988 DEFINITION D.melanogaster glyceraldehyde-3-phosphate dehydrogenase-1 gene. ACCESSION M11254 M11256 M11257 NID g157475 KEYWORDS . SOURCE D.melanogaster, (Canton S) embryo DNA, clone DmGAPDH-1. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2141) AUTHORS Tso,J.Y., Sun,X.-H. and Wu,R. TITLE Structure of two unlinked Drosophila melanogaster glyceraldehyde- 3-phosphate dehydrogenase genes JOURNAL J. Biol. Chem. 260, 8220-8228 (1985) MEDLINE 85234524 FEATURES Location/Qualifiers source 1..2141 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..2141 /note="Glyceraldehyde 3 phosphate dehydrogenase 1" /gene="Gapdh1" /allele="" /db_xref="FlyBase:FBgn0001091" mRNA 351..1624 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1612 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1626 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1625 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1622 /gene="Gapdh1" /note="Gapdh-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1627 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 351..1623 /gene="Gapdh1" /note="Gapdh-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1626 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1625 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1624 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1623 /gene="Gapdh1" /note="Gapdh-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1622 /gene="Gapdh1" /note="Gapdh-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1627 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" mRNA 352..1612 /gene="Gapdh1" /note="Gadph-1 mRNA (alt.)" /db_xref="FlyBase:FBgn0001091" CDS 414..1412 /gene="Gapdh1" /note="glyceraldehyde-3-phosphate dehydrogenase (Gadph-1) protein (EC 1.2.1.12)" /codon_start=1 /db_xref="FlyBase:FBgn0001091" /db_xref="PID:g157476" /translation="MSKIGINGFGRIGRLVLRAAIDKGASVVAVNDPFIDVNYMVYLF KFDSTHGRFKGTVAAEGGFLVVNGQKITVFSERDPANINWASAGAEYVVESTGVFTTI DKASTHLKGGAKKVIISAPSADAPMFVCGVNLDAYSPDMKVVSNASCTTNCLAPLAKV INDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVI PALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEEASKGPLKGILGYTDE EVVSTDFLSDTHSSVFDAKAGISLNDKFVKLISWYDNEFGYSNRVIDLIKYMQSKD" BASE COUNT 579 a 539 c 496 g 527 t ORIGIN 1 bp upstream of XbaI site. 1 tctagaactt aaagaactaa cttggcaaca atgtaaagaa aaactttagt gcaagatgaa 61 ggaattttat acttgacaat gctaattttt gtataaactt cattacgtaa agggtcctac 121 aacccatata tatcattagt tgttagaggc tctttttaag gcgcttatat aatcaaaccc 181 tttgtaaaaa ttaaagtttt aaatggaatt ctaatcgatt tatttcacat tagctttatt 241 taagtgtgac ctacgcagaa agctagcgaa atactcatca accctccccc gccatcgcca 301 gcgccattct cctaatttgc gaaaaaagct ccgggaaaag gaaaaagcgg cagtcgtaat 361 agcgaactga aactgaacga gagtaaaagt taaaagacag caggaactca gccatgtcga 421 agatcggaat caacggattt ggccgcatcg gccgcttggt gctccgcgcc gccatcgata 481 agggcgcctc cgtggtggcc gtcaacgatc ccttcatcga tgtcaactac atggtttacc 541 tgtttaaatt cgactcgact cacggtcgtt tcaagggcac cgttgcggct gagggcggat 601 tcctggtggt gaacggccag aagatcaccg tgttcagcga gcgcgacccg gccaacatca 661 actgggccag tgctggagcc gagtatgtgg tggagtccac cggagtgttc accaccatcg 721 acaaggcgtc cacccacttg aagggcggtg ccaagaaggt catcatctcg gccccatccg 781 ccgatgcgcc catgttcgtg tgcggcgtta acctggacgc ctacagcccc gacatgaagg 841 tggtctccaa cgcctcgtgc accaccaact gcctggctcc cctggccaag gtcatcaatg 901 acaacttcga gatcgtcgag ggtctgatga ccaccgtgca cgccaccact gccacccaga 961 agaccgtcga cggtccctct ggcaaactgt ggcgcgatgg acgtggcgcc gcccagaaca 1021 tcatcccggc cgccaccgga gccgccaagg ctgtgggcaa ggtcatcccc gccctgaacg 1081 gcaagctgac cggcatggct ttccgcgtgc ccacgcccaa tgtctccgtt gtggatctta 1141 ccgtccgcct gggcaaggga gccacctatg acgaaatcaa ggctaaggtc gaggaggcct 1201 ccaagggacc cctgaaggga atcctgggct acaccgacga ggaggtggtc tccaccgact 1261 tcctcagcga cacccattcg tctgtgttcg acgccaaggc tggcatttcg ctgaacgata 1321 agttcgtcaa gctaatctcg tggtacgaca acgagttcgg ttactccaac cgcgtcatcg 1381 acctgatcaa gtatatgcag agcaaggact aaactagcca caactatcgt acaaacccgg 1441 ccagcagctg gtcgggaatc actgttgcat aatccgcaag gggcgcaatt gaggatgctt 1501 tttttttcaa atgcacaaaa tagccataat tacgcaaagt acatatttat tgttgttgaa 1561 taaagtatcg ccctgttact gtatttaaat gccagctatt tgaaaaataa aacttgtgca 1621 tcgaatgaag aacgttgctt gtgtaagccc aaggcgtgtg aaggttatat cgggcggact 1681 tgctgagata tgcagtgaat acacaaataa gtatctgtgc ttcgcctggg ggagtcatcc 1741 caatcccaaa ggaacgatgt ttctatttat gtcatcatat gtatgtatgt acgtttgttg 1801 ttgccaactc tggcagtctc gaaattcgaa gataacgaac aaatatattc tcttaccgct 1861 gcactttcaa acctgtgcgg atgctgtttg tttgtctcgg attttgattc cttcggcaaa 1921 acaacataaa tacacataac gaccaattga actcagacca tataaacata tatgcttata 1981 tatactttat actttttggt ggataaaggg tttgttttca tatatcgacc tgcgttccta 2041 tacaaagagg ctttcttatg agcataacca aggtcacgaa aggtcataca tatacttgct 2101 gcttggtaca taacttatcg gcattacaga attgaatcga t // LOCUS DROGCL 2470 bp DNA INV 17-SEP-1992 DEFINITION Drosophila melanogaster (clone 10B-1) germ cell-less protein (gcl1) gene, complete cds. ACCESSION M97933 NID g157489 KEYWORDS germ cell-less protein. SOURCE Drosophila melanogaster (strain Oregon R) (library: lambda-zap) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2470) AUTHORS Jongens,T.A., Hay,B., Jan,L.Y. and Jan,Y.N. TITLE The germ cell-less gene product: A posteriorly localized component necessary for germ cell development in Drosophila JOURNAL Cell 70, 569-584 (1992) MEDLINE 92370679 FEATURES Location/Qualifiers source 1..2470 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" /germline /tissue_lib="lambda-zap" /map="44E (chromosome 2)" gene 223..1932 /note="germ cell-less" /gene="gcl" /allele="" /db_xref="FlyBase:FBgn0005695" CDS 223..1932 /gene="gcl" /codon_start=1 /function="required for germ cell formation in Drosophila'" /product="germ cell-less protein" /db_xref="PID:g157490" /translation="MGQIVGSMHMNVAEVFSNRRKRKRSTDSSLGKDDPAQLDTTQPK KKKLLTTTQYIYKALFKEEKNSDVAVMALDKVWHLHKVYLSQSPYFYTMFNGTWREAQ QNFIQITILDDRITVASLDAVFGSMYSDEIEIESADVISVLATATLFHLDGIIDKCAE VMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHISIELMS ALTASPDLYVMQTEFSLYTLLRTWMFLRLHPDYDPEDPVQRAEALKTQELLVNAGVET HAPSGDVVQWTYFTSRSEERSFLATPEGQPYVKVFQKLRTQYLTNHYMDLKIIYNDNI IPKEWLYRHIHNHWDALLRIDHGQEDCSPQQLDDEQFFENCMRCGRMLLEPGYQKWRW TGFNFGMDLILIMDSRRLNIRRHHRHEHERVLSLQTKRKFMVRTTVTSINAQRQAVFT QTSEICSLSLEKNEEVPLMVLDPKLVHPLLISINMLVVMPPNQSFKEIVPLSEEATTS LSIPISEIGANSDRPLSPSSADDSAVFIGDSEPSTPSSPAPRPRIAWSASETGAICGQ LAC" BASE COUNT 665 a 603 c 589 g 613 t ORIGIN 1 aactaaaaga tttggagagc caactgcagc aaaacagaga taaaattgac agcgaacgga 61 attgaaatgg cttaaacggc atgcctaatc agactcgcgt agaattttag cccgtgttta 121 ttttatttat tgaaacgaag ccagtgaacg tggggtgcaa ttgctgttat ataaaagtac 181 ggcactgtaa ctgcagtttt acaagaattc ctgcgctcag ccatgggtca aatagtggga 241 tccatgcata tgaacgtcgc tgaggtgttc agcaatcgac ggaagcggaa gcgcagcact 301 gattcatctt tggggaagga tgatccggcc cagttagaca ccactcagcc caaaaaaaaa 361 aaacttctta ctaccaccca gtacatatac aaggcgctct tcaaggagga aaagaactcg 421 gatgtggctg tcatggctct ggataaggtc tggcacctgc ataaggtgta cctgagccag 481 agtccatact tctatactat gttcaatggg acgtggcggg aagcccagca gaatttcatt 541 cagatcacaa tcctggacga ccggatcacc gttgctagcc tggatgctgt ctttggttcc 601 atgtattccg atgagatcga aatcgagtca gcagatgtta tctcggtatt ggccacagcc 661 acgttgttcc acttagacgg aatcatcgac aagtgtgccg aggtgatggt ggataacatt 721 agtccggaga cagctatcca gtattacgag gccgcctgcc agtacggtgt ggtcggagtc 781 aagaagtcca cctttcagtg gttccagatc aatctgctaa gcatttatag taagcaaccg 841 aacctgctta ggcacatctc cattgagctg atgagtgccc tgaccgccag tcccgatttg 901 tatgtgatgc agacggagtt ctcgctgtac actctactgc gcacatggat gttcctacga 961 ctgcatcccg actacgatcc agaggacccg gtccagcggg cggaggcgct aaagacgcag 1021 gagcttttgg ttaatgccgg cgtggaaacg catgcgccta gtggtgatgt cgtccagtgg 1081 acatacttta ccagccgctc ggaggaacgc tcgttcttgg ccacgcccga ggggcagcct 1141 tatgtgaagg tctttcagaa gctacgaacc cagtacctga ccaaccacta catggatcta 1201 aaaatcatat acaatgacaa tattataccc aaggagtggc tgtatcggca cattcacaac 1261 cactgggatg cattactacg tatcgatcat gggcaggagg attgtagtcc tcagcagctg 1321 gacgatgagc agttctttga gaactgcatg cgatgcggac gtatgttgct tgagcctggc 1381 taccagaagt ggcgctggac gggcttcaac tttggcatgg atctcatcct gatcatggac 1441 tcgcgtagac tgaacattcg tcggcaccac cggcacgagc acgagcgagt gcttagcctg 1501 cagacgaaac gcaagttcat ggtccgcacc acggtgacct cgataaacgc ccagcgccag 1561 gcagtcttca cccaaacgtc cgagatctgt tctcttagcc tcgaaaagaa cgaggaggtg 1621 ccactcatgg tgttagaccc aaagttggtg catccacttc tcatttcaat aaacatgctg 1681 gtggtaatgc caccgaatca gagtttcaag gaaattgttc cgctcagcga ggaggcgaca 1741 acctctctct ccatacccat ttcggaaatc ggagcaaaca gcgacagacc gctgtccccg 1801 tccagtgctg atgattcggc cgttttcatt ggtgactctg agccttcgac gccatcctcg 1861 ccagccccac ggcccagaat cgcttggtcg gctagcgaaa cgggcgcaat ctgcggacaa 1921 ctggcgtgct gagcacgtgc tgagcagtcc accaaattaa taccagtacc accactacca 1981 ccattttttt gttcatttac ccgcagcagt tcgggctcgt tgtagttgtt ttgtaaattc 2041 gtttatgccc atcgcgatta gctacggctg atcactccat ctagacgttt gtacatcgag 2101 tataagcata tccgcaatcg ttttggaatg cgcagatcta tatttttgta tatcgtttac 2161 accaccagta tcatgtaatg acgctttacg tcatctacct taaatggagt agacgcacac 2221 tctagtgccc tcgcacaata tgtaggcgtt gcaaatttag tttgtaaatt tggaatttaa 2281 agattaattg ttatgtttaa gtaacaagaa aaaacgcggc aaagaaatta tggtttaagc 2341 gtcttgcaat cctgcaagtt caacgcatgt aattactgtc cctaactaca tttttactcg 2401 ctaaatgtac gcacagtaac attaccttga gtgacattta ttaaagatta cacttaataa 2461 aaaaaaaaaa // LOCUS DROGGBCS 4590 bp DNA INV 15-MAY-1996 DEFINITION D.melanogaster (clones T-beta-1E, T-beta-1J) guanine nucleotide-binding regulatory protein (Gbb) gene, complete cds. ACCESSION M22567 J04083 L05555 L06051 L06052 L06053 M22566 NID g157497 KEYWORDS guanine nucleotide-binding regulatory protein; highly expressed gene; signal transduction. SOURCE Drosophila melanogaster (strain Canton S) (clone: T-beta-1J) DNA; Drosophila melanogaster (strain Canton S) (tissue library: Charon 4; Maniatis (1978)) adult DNA; and Drosophila melanogaster (strain Canton S) (clone: T-beta-1E) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4590) AUTHORS Yarfitz,S., Provost,N.M. and Hurley,J.B. TITLE Cloning of a Drosophila melanogaster guanine nucleotide regulatory protein beta-subunit gene and characterization of its expression during development JOURNAL Proc. Natl. Acad. Sci. U.S.A. 85 (19), 7134-7138 (1988) MEDLINE 89017152 REFERENCE 2 (sites) AUTHORS Yarfitz,S., Niemi,G.A., McConnell,J.L., Fitch,C.L. and Hurley,J.B. TITLE A G beta protein in the Drosophila compound eye is different from that in the brain JOURNAL Neuron 7 (3), 429-438 (1991) MEDLINE 92000689 COMMENT Draft entry and computer-readable sequence for [1] kindly provided by S.Yarfitz, 13-JAN-1989. FEATURES Location/Qualifiers source 1..4590 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="adult" /germline /tissue_lib="Charon 4; Maniatis (1978)" /map="I (band 13F)" source 1..2041 /organism="Drosophila melanogaster" /strain="Canton S" /clone="T-beta-1E" mRNA join(1265..1376,2543..2663,2737..4075) /gene="G13F" /note="this gene is abundantly expressed in brain and thoracic ganglion" /citation=[2] /db_xref="FlyBase:FBgn0001105" gene 1265..4075 /note="G protein &bgr;-subunit 13F" /gene="G&bgr;13F" /allele="" /db_xref="FlyBase:FBgn0001105" exon 1265..1448 /gene="G13F" /note="alternative 3' end" /db_xref="FlyBase:FBgn0001105" /number=1 mRNA join(1265..1448,2543..2663,2737..4075) /gene="G13F" /note="this gene is abundantly expressed in brain and thoracic ganglion" /citation=[2] /db_xref="FlyBase:FBgn0001105" exon 1265..1376 /gene="G13F" /note="alternative 3' end" /db_xref="FlyBase:FBgn0001105" intron 1377..2542 /gene="G13F" /db_xref="FlyBase:FBgn0001105" /number=1 intron 1449..2542 /gene="G13F" /db_xref="FlyBase:FBgn0001105" /number=1 source 2042..4590 /organism="Drosophila melanogaster" /strain="Canton S" /clone="T-beta-1J" exon 2543..2663 /gene="G13F" /db_xref="FlyBase:FBgn0001105" /number=2 variation 2574..2576 /gene="G13F" /note="in clone T-beta-C3F" /citation=[1] /db_xref="FlyBase:FBgn0001105" /replace="aa" intron 2664..2736 /gene="G13F" /db_xref="FlyBase:FBgn0001105" /number=2 exon 2737..4075 /gene="G13F" /db_xref="FlyBase:FBgn0001105" /number=3 variation 2832 /gene="G13F" /note="in clone T-beta-C6R" /citation=[1] /db_xref="FlyBase:FBgn0001105" /replace="g" CDS 2945..3967 /gene="G13F" /note="this gene is abundantly expressed in brain and thoracic ganglion" /citation=[2] /codon_start=1 /product="guanine nucleotide-binding regulatory protein" /db_xref="PID:g157498" /translation="MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQ MRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMT CAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTS SGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVC KQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSV AFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDS FLRVWN" variation 3572 /gene="G13F" /note="in clone T-beta-C6R" /citation=[1] /db_xref="FlyBase:FBgn0001105" /replace="t" BASE COUNT 1461 a 977 c 940 g 1211 t 1 others ORIGIN 1 bp upstream of EcoRI site. 1 ctgcacagat taagctgttt ccaccagtcc gacctgacgg attcatcgaa gagcctttca 61 tttaaattga ctatatttgg cgttcgcgga aaatcccgca gacatcgggc gctccaataa 121 cgccggcctc gttccgagaa tggattccga atcacaataa tgcccgggat ggttagttaa 181 tgtataggat cgccaatctt ttggcgattt aacgcctggc attgtctgta ggctttgtac 241 attgctgata cttaatcgtt gaacaatatt ctgaggggaa tgtagaaatc ataattcaat 301 tgcaacggat cgagtactta cattatcact ctttttcttg atcattccct tcgactacac 361 aactaatcga tcttaacaac ttcgttaact aggactggta ctttgcactt gtactgctta 421 aaactagctt gaacctgctt caaaaaccat aagtaccata ataaaccatt aaggaataaa 481 aaccgaatag gcaataggtn tgacctgtcg cggttggaga aatcttaaat gcttttgagc 541 acgtttacaa atcagacatg gggtggaaat ctaggataga tataaattaa aataaatgca 601 ataaggacat gccgaaagct cgatgtcttt catgcaaaaa tttagccttt tttcatgagg 661 tgatcatttg tgattataat cttatcgata taaagttatc gatatatgaa cggattttcg 721 taatgcaatc atttttaact attttgaaat agttgttttg agccgatttt ttcattgttt 781 acgtttttgc agtgatcgtt ttcattattt cggtcgaaga tacgtcttaa gggttgcaca 841 gaaaaaaatc aagtgggaac attacacttc agagcgataa tagatcttta ttttttatat 901 ttttatgaat taaaattaaa aaaggagttg aaataagaaa tggtatattt atatgacata 961 tttatatata tatatattgt tgtagttatt tactttcagt gaggggcgtg cttaatacta 1021 tattcggttc aaaagcaaag gggtaccaca ttgtttatat aaaataaaat atgtttttaa 1081 aatataacgt cttttgacaa ataaactttg aataaataaa gacaagttgg tatatttgcc 1141 ggctctctcc gtccgcagtg tgaacagcct ggttgccgaa tatgtatcaa tgctatcgat 1201 atccgcatac atcgatactg cttcccttgc acccttaatt tgtttctagg tgttggctgc 1261 caattgtaga gtgcaaatga aaagttacag attggtggct tcgttaacaa aattttcagt 1321 tatttgtgta gttgaagacg ggaatttgtt ttgcgtataa aaagttaaca ctgcgtgtaa 1381 gtaacgtatt gtcgtcatca acaaactgtc cagtgaatga aaattgaaag aaaaattact 1441 gatctatggt aatgtgtgtg tatgtgctaa aaggaaaaaa aaatttttca tactcgcgtg 1501 aacgacgagt gatgaaaatg cagtctcgat agttttgcgc ctacatatat gtatgactat 1561 tgcacagatt tggttgtttt ttttttctaa acgattgcca gtcggcatgg aaaattaaat 1621 gaaatgagct ccatatattt tgtgcctgtg ccagtgcctt ccaacgaaaa atgttcaacg 1681 tttaaaattg attatttttt ttttatctat ttccctcctg ctctttgtca tgtgtacgct 1741 tacgcggttg ctgcgcgtgc gaatgggaca ccgattgccg cgactgtttt tgtctcaccg 1801 cccgctttcg ggaacttctg acctgctttc gctgccgcga tttcaattgc gcacggctcg 1861 catccactag tcgtgctcct tgctccaatc gaaagggcca cttgcgccgc ggtggtggtg 1921 caaaacttgc aattttggtg tacaaaaaaa gcaaaaggaa tatatcccat atatcctacc 1981 catctatcgg aaggaacgga attcgagctc ggtacccggg gatcctctag agtcgaccga 2041 attcgaaatc cagcacataa aaagcataaa tcacatcaaa aaattcgcat tttctctggt 2101 ccttagcacc agatcgcttt ttatgcatcc aattcggttt cctctttttt tttagtatac 2161 catcccatcc gcgagataac attctgtatt aaacaaaacg cccaacatcc taattacaaa 2221 tcagacggga cggaaaatcg aaaaaactat aggaacctct ctctcccccc ccactaacgt 2281 agtttatgtg tatttaacaa acgaagaact ttctgcagag gtcgaaatac accaatcgca 2341 cataccaaac aaaaagtaat aaaaacgaaa taattgaaaa accaaatagt taaattggca 2401 gagcaaacac aggacgacga ctatgaacta aagtcagaaa ttaatggaca tcgtaccgag 2461 aatataatcc gtgaatagta ctatacgata aaacagaaaa agaaaaaaag tcaactaaaa 2521 agcaaaaaac caactcttgc agaacacagt tcatgattta tcctatccat actagaagtg 2581 cacaaaataa acgccgtatg caagcgtgat catccaaggc tcattatccg actaagctac 2641 tggccagctt aaaaaaagta agcgtaagta cacccacaat tgaccatata actaggttaa 2701 tgaacgcctc catttactac ttccccatat gtatagcacc atctaacaag agcgaatcga 2761 atcgaatcga cttggacgac cgaccgaccg accgcacaaa gaaggatcta tctggaaagc 2821 cggctagccg attcccgcat ccgattccga atacgaatac gtatccgtat ccgaatccga 2881 atttgaaacc gaatcctcaa ccaaatcatc ccataaggac gccgctgtct tcaacgatca 2941 caagatgaat gaactagaca gtctcaggca ggaagccgag tccctaaaga acgccattcg 3001 ggatgcccgg aaggcggcct gcgacacatc actgttgcaa gcggccacct cgctggaacc 3061 catcggccgc atacagatgc gcacccgtcg tacattacgc ggccatttgg cgaaaatcta 3121 cgccatgcat tggggcaacg attcaaggaa tctcgtatca gcctcacagg acggcaaact 3181 gatcgtttgg gactcgcata ccacgaacaa agtccatgcc attccactgc gatcctcgtg 3241 ggtgatgacc tgtgcgtacg ccccatccgg tagctatgtg gcctgcggtg gcctcgacaa 3301 catgtgttca atttacaacc taaagacgcg cgagggcaac gtccgggtgt cccgtgagct 3361 gcccggccat ggtggctatc tatcgtgctg ccgcttcctg gacgacaatc agatcgtgac 3421 cagctccggt gatatgtcgt gcggattgtg ggatatcgag acgggactgc aggtaacctc 3481 gtttttgggc cacaccggcg atgtgatggc cctctcactg gcgccccaat gcaaaacgtt 3541 cgtatccggc gcctgcgatg cgtccgccaa gctatgggac atccgggagg gtgtctgtaa 3601 acaaaccttc cccggccacg aatccgatat caatgcggtc acatttttcc cgaatggtca 3661 ggcattcgcc accggttcgg acgacgcaac ctgtcgattg ttcgatatcc gtgccgatca 3721 ggagttggcc atgtattcgc acgacaacat catatgcggc atcacatcgg tggcattctc 3781 gaagagcgga cgtctgttat tagcgggcta cgatgatttc aactgcaatg tatgggacac 3841 gatgaaggca gaacggtctg gcatactcgc tggccacgac aaccgtgtat cctgtttggg 3901 tgtcaccgag aacggcatgg cggtggcaac aggatcgtgg gactccttct tgcgtgtatg 3961 gaactaaaaa taaaacagaa acagaaacag cagcataagc agaaacagaa acaaaacaaa 4021 acaaaaaaca agagaaaacc aaacaaacaa agaacaacaa aaaaaagagg aaaaagaaaa 4081 agaacttgaa aatgcattaa agggtggggt ggggtgtcag gtcaactgtt gcgtcagtct 4141 gcggatagtg tttcacccat catctacatt gtcatctaat gtatatgatt cggtgttacc 4201 gtctctgtgt gaaatattaa atgagttgcc ggatcgtttt gaatatgtgg gcgtcacgta 4261 gttgactgaa cgtagaccac aacaacaaag aactttatat acaacattat tttatattgc 4321 tatatactta ttaactaaaa attatacaaa aaaaacaaaa taaaaccaaa aaaaaaaaac 4381 aacaaaaacc gaaaaaatcg cagcaacata caaatagaca tacacacgca tacaagaata 4441 ttattagtgt aaatggaaaa ttgcagaaaa gaaaaaatga aaaaccaaga acaaccgatc 4501 aagaagaaac aaaacgataa agaaatgatg gagtaacgat gggcccgctg atagtcagaa 4561 gagtaagagt cagttgttta gtcagaattc // LOCUS DROHMGCO 3973 bp DNA INV 15-JUN-1989 DEFINITION D.melanogaster 3-hydroxy-3-methyglutaryl coenzyme A reductase (HMG CoA) gene, complete cds. ACCESSION M21329 NID g157623 KEYWORDS 3-hydroxy-3-methylglutaryl coenzyme A reductase. SOURCE D.melanogaster DNA, clone lambda Dred-2. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3973) AUTHORS Gertler,F.B., Chiu,C.-Y., Richter-Mann,L. and Chin,D.J. TITLE Developmental and metabolic regulation of the Drosophila melanogaster 3-hydroxy-3-methylglutaryl coenzyme A reductase JOURNAL Mol. Cell. Biol. 8, 2713-2721 (1988) MEDLINE 88302188 FEATURES Location/Qualifiers source 1..3973 /organism="Drosophila melanogaster" /db_xref="taxon:7227" CDS 573..3323 /note="3-hydroxy-3-methylglutaryl coenzyme A reductase" /codon_start=1 /db_xref="PID:g157624" /translation="MIGPLFRATQFCASHPWEVIVALLTITACMLNGGQEQYPGCEQR IGHSTASAAAAGSGSGAGSGASGTIPPSSMGGSATSSRHRPCHGWSQSCDGLEAEYNA ADVILMTIVRCTAVLYCYYQFCSLHRLGSKYVLGIAGLFTVFSSFIFTTAIIKFLGSD ISELKDALFFLLLVIDLSNSGRLRSGAMGSNQAEVTQNIARGLELLGPAISLDTIVVV LLVGVGTLSGVQRLEVLCMFAVLSVLVNYVVFMTFYPACLSLIFDLSRSGVDMSVVRE KAKGSLPLKSLTEEEQKANPVLQRVKLIMTTGLMAVHIYSREVSPAATTMVDKTLTPT LSLNVSNNRTESGEIADIIIKWLTMSADHIVISIVLIALVVKFICFDNRDPLPDQLRQ SGPVAIEAKASQTTPIDEEHVEQEKDTENSAAVRTLLFTIEDQSSANASTQTDLLPLR HRLVGPIKPPRPVQECLDILNSTEEGSGPAALSDEEIVSIVHAGGTHCPLHKIESVLD DPERGVRIRRQIIGSRAKMPVGRLDVLPYEHFDYRKVLNACCENVLGYVPIPVGYAGP LLLDGETYYVPMATTEGALVASTNRGCKALSVRGVRSVVEDVGMTRAPCVRFPSVARA AEAKSWIENDENYRVVKTEFDSTSRFGRLKDCHIAMDGPQLYIRFVAITGDRMGMNMV SKALRWPFAEFTLHFPDMQIISLSGNFCCDKKPAAINWIKGRGKRVVTECTISAATLR SVLKTDAKTLVECNKLKNMGGSAMAGSIGGNNAHAANMVTAVFLATGQDPAQNVTSSN CSTAMECWAENSEDLYMTCTMPSLEVGTVGGGTGLPGQSACLEMLGVRGAHATRPGDN AKKLAQIVCATVMAGELSLMAALVNSDLVKSHMRHNRSSIAVNSANNPLNVTVSSCST IS" BASE COUNT 975 a 1029 c 1015 g 954 t ORIGIN 160 bp upstream of XhoI site. 1 gttttggagc tcgcagcgaa acagtttata tttccgcact ccaggatttc acttggcaga 61 gagtcgccgc gcagccaatt agccagttag cccgatccgc gagaatatcg atatttaacc 121 gggccacagc agcactgcca acaaaaccaa atacaacaac tcgagtgtgc gccctgcagc 181 aaaaataact aactaaaaaa aagtaaagct gtcgtgtgtt ttgcacattt tacaatttgt 241 tagccaaata aagtagcaat cgaaattcgc gaacgaaagt gccgcaatta gtggttatat 301 aaatgtaagc caaacaacgc gtcgtgcaag aaactatgtg gatttgttcg cagaaagttg 361 acaaactgag aagaactagt tagcgaccac aacgaccgct ccaactggaa accgcactcc 421 gccaaaagag atcctcatta gcatttcttt tgtggattaa ggcgcgtgtc aactatttgt 481 caccgatctc caagcaaacg atcgattcct cgtcgaaaag caagccagcc aagattggcc 541 agatctggac gggattcgga cgtgccgcag ccatgatagg acctttgttt cgcgccacgc 601 agttctgcgc ctcgcatccc tgggaggtca tcgtggccct gctgaccatt acggcatgca 661 tgctcaacgg tggacaagaa caataccctg gatgcgagca gcggattggg cacagcaccg 721 cctcagctgc cgccgccgga tccggatctg gagctggatc tggagcaagt ggaacaatac 781 caccatcgtc tatgggtggc tcggccacct ccagccggca caggccctgt cacggttgga 841 gccaatcctg tgatggccta gaggccgaat acaatgcagc cgacgtaatc ctgatgacca 901 tcgtccgctg cactgccgta ctgtactgct actaccagtt ctgcagcctc caccgcctgg 961 gatccaaata tgtgctgggc attgccggcc tcttcacggt cttctccagc ttcatcttca 1021 cgacggccat catcaagttc ctgggcagcg acatctccga actgaaggac gccctgttct 1081 tcctgctgct ggtcattgat ctgtccaact ctggccgcct gcgcagtggc gctatgggca 1141 gtaaccaagc ggaggtgacg cagaacattg caaggggact ggagctcctg ggaccagcca 1201 tctccctgga cacaattgtg gtggtgctgc tggtgggcgt tggcacactg tcgggtgtac 1261 agcgcctgga ggtactgtgc atgtttgccg tgctctcggt gctggttaac tatgtggtct 1321 tcatgacctt ttatcccgcc tgcctttcgc taatcttcga tctatcccgc tccggcgttg 1381 atatgtctgt ggtgcgtgaa aaagcgaagg gctcgctgcc cctcaagtcg ctaacagagg 1441 aggagcagaa ggccaatcca gtgctgcagc gtgttaagct tatcatgacc acaggcctga 1501 tggcggtgca catttatagc cgggaggttt ctccggcagc gactacgatg gtggacaaga 1561 cgctgacgcc cacgctaagc ctgaatgtga gcaataatcg cacggaatcg ggtgaaatcg 1621 ccgacattat catcaaatgg ctgaccatga gtgccgatca catagtaatc tcaattgttc 1681 tcatcgcctt ggtagttaaa tttatttgct ttgacaatcg tgatcctctg ccggatcagt 1741 tgcgtcaatc aggtccagtt gccatcgaag ccaaggcttc acaaaccaca ccaattgatg 1801 aagagcacgt tgaacaggaa aaggatacag aaaattcagc tgcagtccgc acactattat 1861 ttaccattga agatcagagt tcagcaaatg cttcaactca gacggatctg ctgccactgc 1921 ggcaccgact ggtgggtccc ataaagcctc cacgcccagt tcaggaatgc cttgacatcc 1981 ttaactccac tgaagagggc agtggaccag cggccttgag tgacgaggag attgtgtcta 2041 ttgtccatgc cggtggcact cactgcccac tccacaaaat agaatctgta ctagatgatc 2101 ccgagagggg agtgcgaatc cgccgacaga tcattggcag tcgtgccaag atgccggttg 2161 gtcgactgga tgtcttgcct tatgaacact ttgactaccg caaagtgctg aacgcctgct 2221 gtgagaacgt tctgggctac gttcccattc ccgttggcta cgcaggaccc ctgctgttag 2281 acggagagac ctactacgtg cccatggcaa ccaccgaggg tgctttggtt gcatccacga 2341 atcgtggctg caaagcgctc tccgttcgtg gtgttagatc tgtcgtggag gacgtgggca 2401 tgacccgtgc tccgtgtgta agattcccca gcgttgcccg cgcggccgaa gcaaaatctt 2461 ggatcgaaaa cgacgaaaac taccgggtgg tgaaaactga attcgattct acatcccgct 2521 ttggccgtct caaggactgt cacattgcca tggatggacc acagctgtat attcgttttg 2581 tggccattac cggcgaccgc atgggcatga acatggtgtc caaggcgctg agatggccct 2641 tcgccgaatt caccttgcac tttcccgaca tgcagatcat ctcgctgagt ggaaacttct 2701 gctgcgacaa gaaaccggcg gccatcaact ggattaaggg acgtggcaag cgggtggtca 2761 ccgagtgtac catttcggca gcaacactgc gttccgtgct gaagacagat gccaagacac 2821 tggtcgaatg taacaagctg aagaatatgg gaggcagcgc gatggccggt agcattggtg 2881 gcaacaatgc tcatgccgcc aatatggtga ctgccgtctt tttggccacg gggcaggatc 2941 ccgcccagaa tgtcacctcg agtaattgct ccactgccat ggagtgctgg gcggagaaca 3001 gcgaggatct ttacatgacc tgcacaatgc cttcgctgga ggtgggaact gtgggcggcg 3061 gaaccgggtt gcccggccag agcgcatgcc tggaaatgct cggagtccgc ggagctcacg 3121 ccacgcggcc aggagacaat gccaagaagc tggcacagat cgtctgcgcc acggttatgg 3181 ccggcgaatt gagcctgatg gcggcgttgg tcaatagcga tctagtcaag agtcatatgc 3241 ggcacaatcg atcctccatc gcagtgaaca gcgccaacaa tcctctcaac gtgaccgtgt 3301 ccagctgcag caccatcagc taagattggg cgctgcaggg gcgccgactt ctaccctttt 3361 gtacatagag tctctttgaa cgtgcaggcc aggcgttgca actcatttct ttaggtgtta 3421 ccttgtagtt gaatgtttca caaatttttt tttttgcttg atagatatcc tgattggcct 3481 ggccagggta ccgtacagcc agcgtcctcc acatcggcaa atcgctccaa gccaatgctg 3541 agggcatagg atgggttgat atccgatatc cactcctgct gctacttcca cttagattgt 3601 acttttcgtc gtaacgctat ttttttctac caatacataa ctgaatactg agtgatgatc 3661 cgctggaatc cacaccagat gccagtcagt ggagctatga ccaggactag tgctagcgct 3721 gaaacttgta aaattatttc taagcgaaaa gtagtacata gggtttgtat agtgattaaa 3781 ttaaaacttt taattagagc gtgtacgatc gatatcgata tcttaatttc ggttttcatt 3841 tttaacaaaa aattataaac acaaagcgta atggataaat gtcttttgtc gacgctgctc 3901 acgggtttac aaatcagcac ttcatttatt ttattttata tatattatta ataaattatt 3961 ataattaatt tat // LOCUS DROHSC4A 1956 bp DNA INV 19-AUG-1993 DEFINITION Drosophila melanogaster heat shock protein cognate 70 (Hsc4) gene, complete cds. ACCESSION L01500 NID g157660 KEYWORDS ATPase; heat shock gene family; heat shock protein cognate 70. SOURCE Drosophila melanogaster (library: Maniatas) embryo DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (sites) AUTHORS Perkins,L.A., Doctor,J.S., Zhang,K., Stinson,L., Perrimon,N. and Craig,E.A. TITLE Molecular and developmental characterization of the heat shock cognate 4 gene of Drosophila melanogaster JOURNAL Mol. Cell. Biol. 10, 3232-3238 (1990) MEDLINE 90258915 REFERENCE 2 (bases 1 to 1956) AUTHORS Rubin,D.M., Mehta,A., Zhu,J., Shoham,S., Chen,X.J., Wells,Q. and Palter,K.B. TITLE Genomic structue and sequence analysis of Drosophila melanogaster HSC70 genes JOURNAL Gene 128, 155-163 (1993) MEDLINE 93292982 FEATURES Location/Qualifiers source 1..1956 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="embryo" /tissue_lib="Maniatas" /map="3 88E 5,6" gene 1..1956 /note="Heat shock protein cognate 4" /gene="Hsc70-4" /allele="" /db_xref="FlyBase:FBgn0001219" CDS 1..1956 /gene="Hsc70-4" /note="location: cytoplasmic normal temp.; nuclear upon heat shock" /codon_start=1 /product="heat shock protein cognate 70" /db_xref="PID:g157661" /translation="MSKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF TDTERLIGDAAKNQVAMNPTQTIFDAKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPK IEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKD AGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFDLGGGTFDVSILSIDDGIFE VKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSS STQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDI VLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLL LLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMT KDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKG RLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSD RTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQGAGFPPGGMPGG PGGMPGAAGAAGAAGAGGAGPTIEEVD" conflict 500 /gene="Hsc70-4" /note="corresponds to bp 525 in M36114" /citation=[1] /db_xref="FlyBase:FBgn0001219" /replace="c" conflict 509 /gene="Hsc70-4" /note="corresponds to bp 534 in M36114" /citation=[1] /db_xref="FlyBase:FBgn0001219" /replace="c" conflict 1189 /gene="Hsc70-4" /note="corresponds to 1213 in M36114" /citation=[1] /db_xref="FlyBase:FBgn0001219" /replace="a" conflict 1260 /gene="Hsc70-4" /note="corresponds to bp 1285 in M36114" /citation=[1] /db_xref="FlyBase:FBgn0001219" /replace="t" conflict 1873..1875 /gene="Hsc70-4" /note="corresponds to bps. 1898-1900 in M36114" /citation=[1] /db_xref="FlyBase:FBgn0001219" /replace="ggt" BASE COUNT 439 a 590 c 565 g 362 t ORIGIN 1 atgtctaaag ctcctgctgt tggtattgat ttgggcacca cctactcgtg cgtgggcgtg 61 ttccagcatg gcaaggtcga gatcatcgcc aacgaccagg gtaatcgtac cactccatcc 121 tatgttgcct tcaccgatac ggagcgtctg atcggagatg ccgccaagaa ccaggtggcg 181 atgaacccga cccagacgat cttcgacgcc aagcgcttga ttggtcgcaa gttcgatgat 241 gccgccgtgc agtctgacat gaagcactgg cccttcgagg tggtcagcgc cgatggcaag 301 cccaagatcg aggtgaccta caaggacgag aagaagacct tcttccccga ggagatctct 361 tcgatggtgc ttaccaagat gaaggagacc gccgaggcct atctgggcaa gactgtgacc 421 aacgcggtca tcaccgtgcc ggcctacttc aacgactctc agcgtcaggc gaccaaggac 481 gccggcacca tcgccggtct gaacgtgctg cgtatcatca acgagcccac tgccgctgct 541 atcgcttacg gtctggacaa gaaggctgtt ggagagcgca acgtgctcat cttcgatctg 601 ggcggcggca ccttcgatgt gtccatcctg tcgatcgatg acggtatctt tgaggtcaag 661 tccacggccg gagatacgca tctgggtggt gaggacttcg acaaccgtct ggtcacccac 721 ttcgtgcagg agttcaagcg caagcacaag aaggatctga ccaccaacaa gcgtgctctg 781 cgtcgtctgc gcaccgcttg cgagcgtgca aagcgtaccc tgtcgtcctc cacccaggcc 841 agcattgaga tcgactctct gttcgagggt accgacttct acacctcgat tactcgtgcc 901 cgtttcgagg agttgaacgc tgatctgttc cgcagcacca tggaccccgt ggagaaggct 961 ctgcgtgacg ccaagctgga caagtcggtc atccacgaca ttgtgctggt cggtggctcc 1021 acccgtatcc ccaaggtgca gcgcctgctg caggatctgt tcaatggcaa ggagctgaac 1081 aagtcgatca atcccgatga ggctgtggcc tacggtgctg ccgtccaggc ggccattctg 1141 cacggcgaca agtcgcagga ggtgcaggat ctgctgctgc tcgatgtgac tcctctgtcc 1201 ctgggtatcg aaaccgctgg cggtgtgatg agcgtgttga tcaagcgcaa caccaccatc 1261 ccgaccaagc agacccagac cttcaccacc tactcggaca accagcccgg tgtgctgatc 1321 caggtgtacg agggagagcg tgccatgacc aaggacaaca acctgctcgg caagttcgag 1381 ctgtcgggca tcccccccgc accacgtggt gtgccccaga tcgaggtcac cttcgatatc 1441 gatgccaacg gtatcctcaa cgtgactgcc ctggagcgtt cgaccaacaa ggagaacaag 1501 atcaccatta ccaacgacaa gggtcgtctc tccaaggagg acatcgagcg catggtcaac 1561 gaggccgaga agtaccgcaa cgaggatgag aagcagaagg agaccattgc cgccaagaac 1621 ggcctcgagt cgtactgctt caacatgaag gccaccctcg acgaggataa cctgaagacc 1681 aagatctcgg actctgaccg caccacaatc ctggacaagt gcaacgagac catcaagtgg 1741 ctggatgcca accagctggc tgacaaggag gagtacgagc accgccagaa ggaactggag 1801 ggtgtgtgca acccgatcat taccaagcta taccagggcg ccggtttccc acccggtggc 1861 atgcccggcg gtcccggagg tatgcccgga gcggctggtg ccgctggcgc tgccggagcc 1921 ggcggtgctg gccccaccat cgaggaggtc gactaa // LOCUS DROIMP 1719 bp DNA INV 11-MAR-1995 DEFINITION Drosophila melanogaster 20-hydroxyecdysone ( IMP-E2) mRNA, complete cds. ACCESSION M55099 NID g705411 KEYWORDS 20-hydroxyecdysone. SOURCE D.melanogaster, cDNA to mRNA, clones DI-1.7RI, DN-1.3RI and E-1.7RI, and DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1719) AUTHORS Paine-Saunders,S., Fristrom,D. and Fristrom,J.W. TITLE The Drosophila IMP-E2 gene encodes an apically secreted protein expressed during imaginal disc morphogenesis JOURNAL Dev. Biol. 140 (2), 337-351 (1990) MEDLINE 90323384 COMMENT On Mar 12, 1995 this sequence version replaced gi:157751. FEATURES Location/Qualifiers source 1..1719 /organism="Drosophila melanogaster" /db_xref="taxon:7227" mRNA 1..1719 /gene="ImpE2" /db_xref="FlyBase:FBgn0001254" /product="20-hydoxyecdysone" gene 1..1719 /note="Ecdysone-inducible gene E2" /gene="ImpE2" /allele="" /db_xref="FlyBase:FBgn0001254" source 51..1719 /organism="Drosophila melanogaster" /clone="DI-1.7RI" source 51..1719 /organism="Drosophila melanogaster" /clone="E-1.7RI" source 51..1719 /organism="Drosophila melanogaster" /clone="DN-1.3RI" sig_peptide 76..122 /gene="ImpE2" /db_xref="FlyBase:FBgn0001254" CDS 76..1476 /gene="ImpE2" /codon_start=1 /product="20-hydoxyecdysone" /db_xref="PID:g157752" /translation="MKPVALILVFLAISQARVLNLPKEAIDIPVAIVEDKEPPVALSL VKEEVKAEEVKPEEVKPIAQEEKAKDLKEEVKPEIKPEIKEQPKPDIKDEIKEDLKAD IKEELKEKIEEQINELPNAKPLELKEKSLEAEEKPQEIKEEVQQPEIKKEATEIKEEP AQNILKSLPAEETVVVPAEELSPNPVEQEQSENQDAAHPQVRQATQATPTQQSTTQGN FVQQLIQNSPIGQFLNQFQPQPAAAAAPAAAQVQADDAAAAAPATPAPTVPGFLNPQA AITSAQQAVQNAAQSAVNATTQAFQGIQQFASNLGNQFQNTLSSLTGQQQQAVSTTPR PPGPIQQFVNNVFGGNNNATAAAPPAQQSGNPLQGIINFLGGNRPQNAPAAAPATQAT EKPAVDDKIDPANDEVGEFVPESDNELRASGENIDDSFEDAGVPSNEVIVVNDDAGEE GNAVQNHPVATDAVAL" mat_peptide 123..1473 /gene="ImpE2" /db_xref="FlyBase:FBgn0001254" /product="20-hydoxyecdysone" BASE COUNT 519 a 455 c 417 g 328 t ORIGIN 1 tcaaacagtt gcggccgtga ggcgctagtg aacacatctt gaaatcgaag aagatatagg 61 agataagtcg cgataatgaa gcccgttgcc ttgatcctgg ttttcctggc cattagccaa 121 gccagagtac tcaacttgcc caaggaggcg atcgatattc ctgtggccat tgtcgaggat 181 aaggagccac cagtagcttt gtctttggtc aaagaggaag ttaaggcaga ggaagttaag 241 ccagaggaag tgaaaccaat tgctcaagaa gagaaagcca aggatctcaa ggaggaagtt 301 aagccagaaa ttaagcctga aatcaaagag cagcctaagc ctgatataaa agacgagatt 361 aaggaagatt taaaggcaga cattaaggag gagctcaagg agaagattga agagcagatc 421 aacgagttgc ctaatgctaa gcccctggag ctgaaggaaa aatccctgga agctgaggag 481 aaacctcagg aaatcaaaga agaagttcag cagccagaaa tcaaaaaaga ggccactgaa 541 atcaaagagg aacctgctca gaacattctg aaatctctgc cagctgaaga gactgtcgtt 601 gtgcctgccg aggaactttc cccgaatccg gtggagcaag agcagtcgga aaaccaggac 661 gccgcgcatc ctcaggtccg tcaagccacc caagccacgc ccacccagca gagcaccacc 721 cagggcaact ttgtccagca gttgatccag aactcgccaa ttggtcagtt cctcaatcag 781 ttccagcccc agccagctgc tgctgccgct ccagcagcag cacaagtcca ggcggatgat 841 gccgccgctg cggcacctgc aactccggct cccacggtgc ccggtttcct gaatccccag 901 gccgccatca cctccgccca acaggccgtg caaaatgcgg cccaaagtgc cgtcaatgcc 961 accacccagg ccttccaggg catccaacag tttgccagca acctgggcaa tcagttccag 1021 aacaccctgt ccagcttgac tggccagcag cagcaggcgg tgtccaccac tccgcgtcca 1081 ccaggtccca tccagcagtt tgtcaacaat gttttcggtg gcaataacaa tgccacggct 1141 gccgcaccgc ctgcccagca aagtggcaat cctctgcagg gaattatcaa cttcctgggc 1201 ggcaatcgtc cacagaacgc accagctgcc gcaccagcca ctcaggccac agagaagcca 1261 gccgtagatg acaaaatcga tcctgccaat gatgaggtgg gtgaattcgt tccggaatcc 1321 gataatgaac tgcgtgcgag tggcgaaaat attgatgatt ccttcgagga tgctggcgta 1381 ccgtccaacg aggttattgt ggtcaacgac gatgccggcg aggagggaaa tgctgtccag 1441 aatcatccag tggccaccga tgcagtggct ctctaatggg ttgagatgcc attattgcca 1501 ttagctaacc ccacaaacca accgactgac gcccgttttc gtcgacattt ttcgattcaa 1561 attgagaacg aaaagggaaa atgcttcttt agttttctaa gtgcatgcac cgcaacaaat 1621 tatttatttc atactcagcc caggaatttg aatataaaca aatgagagaa cacaaatcat 1681 taaataaaac aaataactta taataaaaaa aaaaaaaaa // LOCUS DROJUN 1440 bp DNA INV 17-JUL-1990 DEFINITION D.melanogaster Djun gene, complete cds. ACCESSION M36181 NID g157773 KEYWORDS jun oncogene-related. SOURCE D.melanogaster (strain OR-R) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1440) AUTHORS Zhang,K., Chaillet,J.R., Perkins,L.A., Halazonetis,T.D. and Perrimon,N. TITLE Drosophila homolog of the mammalian jun oncogene is expressed during embryonic development and activates transcription in mammalian cells JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87, 6281-6285 (1990) MEDLINE 90349599 COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by K.Zhang, 09-JUL-1990. FEATURES Location/Qualifiers source 1..1440 /organism="Drosophila melanogaster" /db_xref="taxon:7227" CDS 438..1307 /note="Djun gene product" /codon_start=1 /db_xref="PID:g157774" /translation="MKTPVSAAANLSIQNAGSSGATAIQIIPKTEPVGEEGPMSLDFQ SPNLNTSTPNPNKRPGSLDLNSKSAKNKRIFAPLVINSPDLSSKTVNTPDLEKILLSN NLMQTPQPGKVFPTKAGPVTVEQLDFGRGFEEALHNLHTNSQAFPSANSAANSAANNT TAAAMTAVNNGISGGTFTYTNMTEGFSVIKDEPVNQASSPTVNPIDMEAQEKIKLERK RQRNRVAASKCRKRKLERISKLEDRVKVLKGENVDLASIVKNLKDHVAHVKQQVMEHI AAGCTVPPNSTDQ" BASE COUNT 411 a 385 c 344 g 300 t ORIGIN 1 ggaattcgat atcaagcttc ttgtttgagt caatgctgcc cattgtttaa acatcgcatt 61 taaagaccag tatcgatagc aatatcgaat aaataatcga cacttgtacc accgctagca 121 ctcattctga aaacaacctt tgcgcgtaaa taaatatttt cgtaaaatta tttagcgaaa 181 ccaaaataaa aatcaaacga ttcgttggcc gataaaaccg gtgattaagc agtggcagtg 241 cagaaagcag aaaacacaaa agtacagatt gtgctaatca aattttgcaa gcaaagttcc 301 cacccactgg tgagtaagaa gaagagcgag ttattcgcat gactcatcgc gaaacgagtt 361 tttatcagat tgttttcatt ccgttttcgt ctctttcact tcatccgaat cagattgacg 421 tcattgcttg agcaaacatg aaaacccccg tttccgctgc tgcgaactta agtattcaga 481 atgctggcag ttccggagca actgccattc agatcatacc taaaaccgag cccgttggag 541 aagaaggccc catgtcgctg gactttcagt cgccgaacct gaacacatcc accccgaatc 601 ctaacaagcg tcccggctcg ctggatctga acagcaagag tgccaagaac aagcgcatct 661 tcgcaccact ggtcatcaac tcaccggatc tgtcatccaa gacggtaaac acacccgatt 721 tggagaagat cctgctatcc aacaatctga tgcaaacacc gcagccggga aaggtgttcc 781 ccaccaaggc ggggcccgtc accgtggagc agttggactt cggcagggga ttcgaggagg 841 ccttacacaa tcttcacact aactcccagg catttccgtc cgccaattcc gccgctaatt 901 ccgccgccaa taacacaact gcggcagcca tgacagcggt gaacaatggc atcagcggag 961 gcaccttcac ctacaccaac atgaccgagg gcttctcggt gattaaggac gagcccgtca 1021 atcaagccag ctcgcccacc gttaatccca ttgacatgga agcgcaggag aagatcaagc 1081 tggagcgcaa gaggcagcgt aaccgtgtgg ctgcatccaa gtgccgcaag cgcaagctgg 1141 agcgcatctc aaagctggag gatcgcgtga aggtacttaa gggcgagaac gtcgacctgg 1201 ctagcatcgt gaagaacctc aaggaccatg tggcgcacgt gaagcagcag gtgatggagc 1261 acattgccgc gggctgcacg gtgccgccga actcgacaga ccaataacat ttggagttgt 1321 cagccgggga gaatgatgag gaggacgtgg cactggagac tgaaaccccc tcgaatcctg 1381 aagatcccga gcaacccatg cctctggaat tcttttcaag tgctagcacc ggtgccttgg // LOCUS DROMSL1A 4644 bp DNA INV 06-MAY-1996 DEFINITION Drosophila melanogaster male-specific lethal-1 protein (msl-1) gene, complete cds. ACCESSION L42514 L14582 NID g862599 KEYWORDS X chromosome binding; dosage compensation; sex determination. SOURCE Drosophila melanogaster DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 4644) AUTHORS Palmer,M.J., Mergner,V.A., Richman,R., Manning,J.E., Kuroda,M.I. and Lucchesi,J.C. TITLE The male-specific lethal-one (msl-1) gene of Drosophila melanogaster encodes a novel protein that associates with the X chromosome in males JOURNAL Genetics 134 (2), 545-557 (1993) MEDLINE 93314941 REFERENCE 2 (bases 1 to 4644) AUTHORS Kelley,R.L., Solovyeva,I., Lyman,L.M., Richman,R., Solovyev,V. and Kuroda,M.I. TITLE Expression of msl-2 causes assembly of dosage compensation regulators on the X chromosomes and female lethality in Drosophila JOURNAL Cell 81 (6), 867-877 (1995) MEDLINE 95300219 COMMENT Correction of msl-1 open reading frame reported in Palmer et al. (1993) Genetics 134: 545-557. Ref [1] reports bases 253-4644 Ref [2] reports bases 1-252. FEATURES Location/Qualifiers source 1..4644 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /map="chromosome 2, 36F7-37A1" gene 3..3122 /note="male lethal 1" /gene="msl-1" /allele="" /db_xref="FlyBase:FBgn0005617" CDS 3..3122 /gene="msl-1" /note="binds to chromosome X" /codon_start=1 /function="dosage compensation" /product="male-specific lethal-1 protein" /db_xref="PID:g862600" /translation="MDKRFKWPPKKRANYLESPYPHIPSGGRQRNLHGHPNQTQHLHQ HPGKIYERQQYGNGRGGHGGGNNNYRKLLHSLPAEHGGGAMAPPSSGGTVCAGADMVK LISENNNLRRMVMLNLNLMQEQTDSIAAKDKELDDQSAKMSVVKAQNEELKQAVAQLE AANQELCKQLRRKNQRRNDNDDDDDDPPLPPAAPQQKLIRCHAETQTVFREREQGTQT IDAQPQFANALPRGINMKESPALDHHAGAVTNQPASKRSESKGRGEFNGKKVSTFILQ RMNQDFEHHIHEQTEVAEEHEMEAHKEQISQEEDQLVAEEDHLHMQEVHTEEVVGGDI FHDALESIEMEVVTEELVDMEEHGQSVDANGHIEEDDDEDDEDDENSDKDDDSEEDDY PWMHSDADVNARTEEELWQNQNYLLELDPTEEKTCAPSAHSTPNHQQKSSTQAEIRKE GNQNRITEKLLQLKPEPMVDALEAPILPKWVAFKKKDKEHELVPESPEVPKQQPHQED AIVDHNAIKNQLEVPKPDLKPKDQPKDEQRQDGQLDVRVEPQEDVRKVQKETLKRQPE DAPKHLPKAVAPKVTKTSSRESTLPKANTADIKDAPAQKVIANHQSTKTQTDPVKTQR LQVKIRQYEMHPDMRTGSSAPSDIRKQKNVDPVSTPETKTIKSKSILVNDKKTTSETS QSPDQEIDVETVRRKLAEHLKKELLSQSHSSQVTLKKIRERVATNLIYPPPSAPVSST TITPAPTPSTTPTPGSTPQHAVTSSMDQEISAAKSKSKAAEQIATPLTPQSNSSVSST TSTIRKTLNNCSPHTYSKATARSGKLQSRFRTATFPYSTRTWEDQEFHCDNEFFLEEA DELLADNPSLEIPKWRDVPVPPSSDKIDTELLSDATFERRHQKYVKDEVDRKCRDARY MKEQIRLEQLRMRRNQDEVLVALDPLRASTFYPLPEDIEAIQFVNEVTVQAFGENVVN MEARDDFGVPWVDAIEAPTSIARSKALAEPVATLASKKIPTTAAEARHQENHSSYVFP KRRKRQKNR" BASE COUNT 1438 a 1032 c 1104 g 1070 t ORIGIN 1 ccatggacaa gcgattcaag tggccgccca aaaagcgggc caactacttg gaatcgccct 61 atccccacat accgtccggt ggccgccaaa ggaatctgca cggccatccc aatcagacgc 121 agcatcttca tcagcatccc gggaagatct atgagcgcca gcaatatggc aatggtcgtg 181 gaggacatgg cgggggtaat aacaactacc gaaagctttt gcattcgctg ccagctgagc 241 atggtggcgg agccatggct cctccttcct ccggcggaac cgtgtgtgcc ggcgccgata 301 tggtcaagct catctcggag aacaacaacc tgaggcgcat ggttatgtta aacttaaacc 361 tgatgcagga gcagacggac agcatagcgg ccaaggacaa ggagctggac gaccaaagcg 421 ctaagatgag cgtggtgaag gcgcagaatg aggaattaaa gcaggccgtt gctcagttgg 481 aggccgccaa ccaggaacta tgcaaacagc tgcggcgaaa gaaccagcga aggaacgaca 541 atgacgacga cgacgatgat cccccactgc cacctgctgc cccgcagcag aagttgatac 601 gttgtcatgc tgagacgcaa actgtgtttc gggagcggga acagggcaca caaacgatag 661 atgcgcagcc tcaattcgcg aatgcacttc ccaggggtat caacatgaag gagtctcccg 721 ctctggacca tcacgctgga gcggtaacga atcagccagc cagcaaacgc tcggagagca 781 aaggccgcgg tgaattcaac ggtaaaaagg tgagcacgtt tattctccag cgcatgaatc 841 aggacttcga gcaccacatc cacgagcaaa cggaagtagc agaggagcac gagatggagg 901 cacataagga gcaaatatct caggaagagg accaactggt cgctgaggaa gatcatctgc 961 atatgcaaga agtgcacacc gaggaagtcg ttggaggcga tatctttcat gatgctttgg 1021 aatcaattga aatggaagtg gtcaccgaag agctggttga tatggaggag catggacagt 1081 ccgtggatgc caacggccat atcgaggagg atgatgacga ggacgacgaa gatgacgaga 1141 atagtgataa agacgatgac agtgaagagg atgattatcc gtggatgcat agcgatgcgg 1201 atgtaaacgc cagaactgag gaagagctct ggcagaatca gaattacctt ttggaattgg 1261 acccgacgga ggagaagacc tgtgcgcctt cggcccattc aactcccaat caccagcaga 1321 agtcttcgac acaggcagag ataaggaaag aaggaaatca gaatcggata actgaaaagt 1381 tgttgcaact aaagcctgag ccaatggtag atgcattaga agcgccgatt ctcccgaagt 1441 gggtggcttt taagaaaaag gataaggaac atgaattagt ccccgagtcc ccagaagtac 1501 ccaagcagca gccgcatcag gaagatgcca tcgttgatca taatgcaata aagaatcagt 1561 tggaagttcc caagccggac ttaaaaccga aggaccagcc caaagacgaa cagaggcagg 1621 atgggcagct ggatgttcgc gtggaaccac aagaggatgt tcgtaaggta cagaaggaaa 1681 ctctgaaaag gcaaccagag gatgcaccta agcaccttcc gaaagcggta gccccaaagg 1741 ttacgaaaac atcctctcga gaaagcacgt tgcccaaggc aaacaccgct gacataaaag 1801 acgctcccgc tcaaaaagta atagccaacc atcagtccac caagacgcaa acggatcctg 1861 taaaaacgca gcgtttgcag gttaagatca ggcagtatga aatgcatcct gacatgagaa 1921 ccggctcctc cgccccgtct gatattcgga aacaaaagaa cgttgatcca gtttcgacgc 1981 ccgagacgaa aaccattaaa agtaaaagta tattggtcaa tgataaaaag accacgtcgg 2041 aaacgtctca gagcccagat caagaaatag atgtggaaac agttagaaga aaactggcgg 2101 aacatttaaa aaaggagctc ctaagccaga gtcattcgtc acaggttacg ctcaagaaaa 2161 taagagagag agtcgccaca aatctaatat atccaccacc cagtgcacca gtatcctcaa 2221 caacaataac cccagcgcct acgccgtcaa cgacaccaac gcctggctca acgccacagc 2281 atgcggttac atcctcaatg gaccaggaaa tatctgcagc aaaatcgaaa tccaaggcag 2341 ctgaacaaat agcaactcct ctgacacctc aatctaatag cagtgttagc agcaccactt 2401 cgactatccg aaaaacgcta aacaactgtt caccccacac gtacagcaag gcaacggcga 2461 gatcgggaaa actgcagtcc agattccgca ctgccacgtt tccgtacagc acgagaacgt 2521 gggaggatca ggagttccac tgtgacaacg agttcttcct ggaggaggcc gacgagctgc 2581 tggcggataa ccctagtctg gagataccca agtggcggga tgtcccagtg ccacccagtt 2641 cggataaaat tgacacagaa ttactgagcg atgcgacctt cgagcgccgg caccagaaat 2701 atgtgaagga tgaggtcgat cgaaagtgta gggatgcacg ttatatgaag gagcagatac 2761 ggcttgaaca gcttcggatg cgacggaacc aagacgaggt gttggttgcg ctggatcctc 2821 tgcgcgcctc cactttctac ccgctgcccg aggacataga ggccatccaa ttcgtcaacg 2881 aggtgacagt tcaggcattc ggcgaaaacg tggtcaacat ggaggcgcgg gatgatttcg 2941 gtgtgccttg ggtggatgca atcgaagcgc caacctccat agccaggtcc aaggcactgg 3001 ctgagccggt ggcaacgttg gctagcaaaa aaatacccac cactgctgcc gaggcgaggc 3061 atcaagaaaa tcactcctcc tacgtgtttc ccaagcgacg caagcgccag aagaatcgtt 3121 agccaggaaa cgcctggggg atctgatact ggagctaagc agaagactgt cggttggggg 3181 aagtcgttgc gtttaccata ctaatgattt taagttttaa atcatgaatt atttcttaag 3241 cttaacgtga aagcaccaga gttaacagta acgattacca cagatcgtct agaagtcaaa 3301 taatccagag cagacgatgt ttattgtata tatggttcct caactgtccg tttttatttg 3361 tgtaataaaa tgaacggaac gctgaattct ggaacattag aaattctttg ttatagaatc 3421 tataaattta tgtcaaagtt ttgtcgtttc ttatgcgatg agagatctta aaaggcaagt 3481 aaattgagct gtcctattca aacatttttc tattaaattg ttatcatatt tatttccttg 3541 aaatataaat aattcgatct tatattagat gtaaatgaat ccaaatgttc gtcgcctggt 3601 ctggaaatga ttagttttta gttaacgtct tgcaattgaa aagagtttca cccttgcttg 3661 tttccaatgt acgtaaatta cttagtccca cacagcatgt aattcaaacc agtcgcttag 3721 ttagattggt taactcatct cagctttatc acctttaaaa tcgcccgcac taaagtgata 3781 agaacacgaa agatattcac ataagttata ttgggcattt ttttggagaa aaacaatgaa 3841 attcgtagac ttatattttt aaatattttt tttctttagc ccttataacc attttttttg 3901 tcttttatac tgttatatct gtcgattctc gaatgcagac aacgtgtgtg ttgcaaagag 3961 ttactcaggt atatctctga taatttgtct tttttttagg atttgattgt gtaaaaattg 4021 agtgcgagtg gttgtctgct tcgagtaatc aaattataca ttggatctat tgttttattt 4081 tattaacttc attaaacttg ttttatgttg tatcgaacaa gaaaggccgt taagatgaaa 4141 actagatttg aagaataaat ataaaactga ttcccgaact gcacacccgt ttggccttat 4201 gggcaccatg tatttttggc taaatattgt ttcgtttaac acttcttctg tttgactttc 4261 tgtcgcaatg atatggagcc tgccaacgtc cggagaaatc aaatcaccag ctcgctttcg 4321 agtggcgtct tatttttgta catttcgata ggtgtaaagt cggttacttg taatatagcg 4381 ttaagtaggc actgtaccca aacgcataga gataattata atgtaacaaa gtaaatacga 4441 tacgatgtac attgtccagg aaaaggagga gcggagggtg gatgaacttc gttcaacacc 4501 attttacacc attcaatgta attagcgtta aatagttcaa tttactgaag cttcaactaa 4561 aaatcaattc gaaattaatt gccaccattg tagagcccta aacaaactca cctactgtaa 4621 gaataaatgt actacataca atgt // LOCUS DRONCX 3176 bp DNA INV 24-MAR-1997 DEFINITION Drosophila melanogaster (clone DR1) Na/Ca exchange protein (NCX) gene, complete cds. ACCESSION L39835 NID g1905891 KEYWORDS Na/Ca exchanger; antiport; transporter. SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3176) AUTHORS Schulze,D.H., Kofuji,P., Valdivia,C., He,S., Luo,S., Ruknudin,A., Wisel,S., Kirby,M.S., duBell,W. and Lederer,W.J. TITLE Alternative splicing of the Na(+)-Ca2+ exchanger gene, NCX1 JOURNAL Ann. N. Y. Acad. Sci. 779, 46-57 (1996) MEDLINE 96250060 REFERENCE 2 (bases 1 to 3176) AUTHORS Ruknudin,A., Valdivia,C., Kofuji,P., Lederer,W.J. and Schulze,D.H. TITLE Na(+)-Ca(2+) exchanger in Drosophila: cloning, expression and transport differences JOURNAL Am. J. Physiol. (1997) In press REFERENCE 3 (bases 1 to 3176) AUTHORS Schulze,D.H. TITLE Direct Submission JOURNAL Submitted (19-MAR-1997) MIcrobiology & Immunology, University of Maryland, Baltimore, MD 21201, USA COMMENT On Mar 24, 1997 this sequence version replaced gi:695320. The Drosophila homologue displays homology to mammalian Na/Ca exchangers previously sequenced, NCX1 and NCX2. The loci designation is NCX. FEATURES Location/Qualifiers source 1..3176 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /clone="DR1" /dev_stage="adult" gene 49..2901 /note="Na/Ca-exchange protein" /gene="Ncx" /allele="" /db_xref="FlyBase:FBgn0013995" CDS 49..2901 /gene="Ncx" /codon_start=1 /evidence=experimental /product="Na/Ca exchange protein" /db_xref="PID:g1905892" /translation="MQLLLKSIFTCALFVIFVYATAQSLLKVQETEARQAYLNVTSSS SSNLSQDDGHFLSRRLRQVSHGEEGDEGAPSQMDDELEQMTKVHGEAPDAEELRECSE GLVLPLWMPQRNISVGDRLVRGFVYFVLLIYLFVGVSIIADRFMAAIEAITSIERAVV VKGPNNTKQVMHVRIWNETVANLTLMALGSSAPEILLSVIEIYAKDFESGDLGPGTIV GSAAYNLFMIIAVCMIWIPAGEVRRIRHLRVFFVTALFSVFAYVWLWLILSVFTPGVI LVWEAIVTLLFFPLTVLWAYIAERRLLVYKYMDKNYRVNKRGTVVAGEHDQVEMDAEK GPKQPMVTSARGNDAEAFDEARREYITLLTELRQKYPDADLEQLEMMAQEQVLARSSK SRAFYRIQATRKMVGSGNLMRKIQERAHSDLTEVKAQLHAGDDEEADDPIRMYFEPGH YTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQR FRIEVIDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILDDDHAGIFAFTDSVFEI TESVGRFELKVMRYSGARGTVIVPYWTENDTATESKDYEGARGELVFENNESEKFIDL FILEESSYEKDVSFKVHIGEPRLAPDDGLAAKIKEVEKKPVQDLTELDRILLLSKPRN GELTTAYVRIRESQEFKATVDKLVAKANVSAVLGTSSWKEQFKDALTVIPADESEFDN DDEEEEVPSCFSYVSHFVCLFWKVLFAFVPPTDICGGYVTFVVSIFVIGVITAIIGDA ASYFGCALNIKDSVTAILFVALGTSIPDTFASMIAAKHDEGADNCIGNVTGSNAVNVF LGIGLAWTIAAVYHSSHGMTFNVEPGTIGFAVALFCGEALIAIMLIMFRRWHKGIGAE LGGPKVSKYISAAILVFLWVFYVVICILEAYDVIRV" BASE COUNT 725 a 854 c 908 g 689 t ORIGIN 1 ccaatcactt ccaggataag gagaagccat cccagttagt aaccagccat gcagttgctc 61 cttaaatcga tattcacctg cgcactattc gtgatctttg tgtatgccac cgcccagtcg 121 ctgctcaaag tccaggagac agaagcgcga caggcgtacc tcaatgttac ctcctccagc 181 agtagtaatc tcagccagga cgatggccac ttcctcagcc ggcgactaag gcaggtcagc 241 catggcgagg agggcgacga gggcgcgccg tcccaaatgg acgacgagtt ggaacagatg 301 accaaggtgc atggagaagc accggacgcg gaggagctgc gcgaatgtag cgagggtctt 361 gtcctgccac tctggatgcc gcaacgcaac atttcggtgg gtgaccgcct cgtccgcggc 421 tttgtttact tcgtcctact gatctacctg tttgtgggtg tgtccatcat tgcggatcgc 481 ttcatggccg ccatcgaggc aatcacatcg attgaacggg cggtggtggt caagggaccc 541 aacaacacca agcaggtgat gcacgtgcgc atctggaacg aaacggtggc gaatctaacg 601 ctaatggccc tgggatcgag tgcccccgag atcctgctct cggttattga gatttatgcg 661 aaggacttcg agagcggtga cttgggacct ggcacaatcg tgggatcagc tgcctacaac 721 ctgtttatga ttatcgccgt atgcatgatc tggataccgg cgggcgaggt acggaggatc 781 cggcatctgc gagtcttctt cgttaccgcc ctcttctcgg tcttcgccta tgtgtggctg 841 tggctcatcc tatccgtgtt cacgcccggc gtgatcctgg tctgggaggc gatcgtgacc 901 ttgctattct tcccgctgac cgtgctgtgg gcctacatcg ccgagcggcg tcttctggtc 961 tacaaataca tggacaagaa ctaccgggtc aataagcgcg gcaccgtggt ggccggcgag 1021 cacgaccagg tggagatgga tgcggagaag ggccccaaac aaccaatggt cacatccgct 1081 cgcggaaacg acgccgaggc cttcgacgag gcccgtcgcg agtacatcac tttgctgacg 1141 gagctacgcc agaagtaccc cgacgccgat ctcgagcagc tggagatgat ggcccaggag 1201 caggtgctgg cgcggagcag caagtcgcgc gccttttatc gcatccaggc cacccgcaag 1261 atggtcggca gcggcaacct gatgcgcaag atccaggaac gcgctcacag cgatctcacc 1321 gaggttaaag cccagctgca tgcgggcgat gacgaggagg cggacgatcc catccgaatg 1381 tacttcgagc cgggtcacta caccgtcatg gagaactgcg gcgagtttga ggtgcgcgtg 1441 gtgcgccgtg gcgacatctc cacctacgcc agcgtggagt acgaaacgca ggacggcacc 1501 gcctccgccg gcaccgattt cgtcggacgg aagggactgc ttagcttccc gccgggggtc 1561 gacgagcagc gcttccgcat cgaggtgatc gacgatgacg tatttgagga ggacgagtgc 1621 ttctacattc gtctcttcaa tccctccgag ggcgtgaagc tagccgtgcc aatgatcgcc 1681 accgtcatga tcctggacga cgaccacgcg ggcatttttg ccttcacaga ctcggtattc 1741 gagatcaccg agtccgtcgg ccggttcgag ctgaaggtaa tgcgctactc cggcgcccgc 1801 ggcaccgtca tagtgcccta ctggacagag aacgacacgg ccaccgaatc caaggactac 1861 gagggggccc gcggcgaact tgtcttcgaa aacaatgaat ccgagaaatt catcgatctg 1921 ttcatcctgg aggagagcag ctacgagaag gatgtcagct tcaaggtgca catcggagaa 1981 cctcgattgg cgccagacga tggattggca gccaaaatca aggaggtcga gaaaaaaccc 2041 gttcaggatc tgaccgaact ggatcgcatc ctgctgctga gtaagccgag aaacggagaa 2101 ctgaccaccg catatgtgcg cattcgagag agccaggaat tcaaggctac agtcgacaag 2161 ctggtggcaa aagcgaacgt ttctgccgtc cttggcactt catcgtggaa ggaacagttc 2221 aaagatgccc tcaccgttat cccagccgat gaaagtgagt ttgataacga tgatgaggag 2281 gaggaggtgc ccagttgctt cagctacgtg agccacttcg tctgcctctt ttggaaggtt 2341 ctctttgcat ttgtgccgcc cactgacatt tgcggcggct atgttacctt tgtggtatcc 2401 atattcgtga ttggcgtcat cactgccatc atcggagatg ccgcctccta tttcggctgc 2461 gccctcaaca tcaaggactc ggtaacggcc atcctgtttg tcgccctggg cacaagcata 2521 ccagatacat tcgccagcat gattgccgcc aagcatgacg agggtgccga taattgcatc 2581 ggcaatgtca cgggcagcaa tgcggtcaac gtgttcctgg gcatcggcct ggcctggacc 2641 atcgccgccg tctaccacag ctcccatggc atgaccttca acgtggagcc gggaaccatt 2701 ggattcgccg tggcgctctt ctgcggcgag gccctgattg ccataatgct catcatgttc 2761 cggcgctggc acaagggcat tggcgccgag ctgggcggtc cgaaagtatc gaagtacatc 2821 agcgcagcga tcctggtatt cctgtgggtg ttctacgtgg ttatatgcat actggaagcc 2881 tacgacgtca tccgggttta aggagttcgc agccgcgttg gtttggcttt ggcttgatta 2941 ttcgcaatgg cgttggactt ttccgtcaaa ttgaagagga tcgttacggc ggaaaacaga 3001 gctaaccgat acttagaagc tattgaaaga tgctgtagat gcagttttta tatgtaaact 3061 tatgaaattg atttatatat atatgtgctc ggcgcgatat ataaatattt cttgtgtaaa 3121 atttatgtta atactaaaag taaaatttaa aagtttaaaa aaaaaaaaaa aggaat // LOCUS DRORHO1A 1467 bp DNA INV 22-MAY-1995 DEFINITION Drosophila melanogaster Rho1 mRNA, complete cds. ACCESSION L38311 NID g624239 KEYWORDS . SOURCE Drosophila melanogaster DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1467) AUTHORS Hariharan,I.K., Hu,K.Q., Asha,H., Quintanilla,A., Ezzell,R.M. and Settleman,J. TITLE Characterization of rho GTPase family homologues in Drosophila melanogaster: overexpressing Rho1 in retinal cells causes a late developmental defect JOURNAL EMBO J. 14 (2), 292-302 (1995) MEDLINE 95137009 FEATURES Location/Qualifiers source 1..1467 /organism="Drosophila melanogaster" /db_xref="taxon:7227" 5'UTR 1..41 /gene="Rho1" /db_xref="FlyBase:FBgn0014020" gene 1..1467 /gene="Rho1" /allele="" /db_xref="FlyBase:FBgn0014020" mRNA 1..1467 /gene="Rho1" /db_xref="FlyBase:FBgn0014020" CDS 42..620 /gene="Rho1" /codon_start=1 /db_xref="PID:g624240" /translation="MTTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE VKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECS AKSKEGVRDVFETATRAALQVKKRKKTRCLLL" 3'UTR 621..1467 /gene="Rho1" /db_xref="FlyBase:FBgn0014020" polyA_site 1467 /gene="Rho1" /db_xref="FlyBase:FBgn0014020" BASE COUNT 423 a 379 c 360 g 305 t ORIGIN 1 gtgctgagtg ttgtgaaatc accaatataa attaatttcc aatgacgacg attcgcaaga 61 aattggtaat tgtcggcgac ggtgcctgcg gtaaaacttg ccttctgatt gtcttcagca 121 aagatcagtt ccccgaggtc tatgtgccca ccgtattcga gaattatgtg gccgacatcg 181 aggtggatgg caaacaggtg gagctggcct tgtgggatac ggccgggcag gaggactacg 241 acagactacg accgctgagc tatcccgaca ctgacgtcat actgatgtgt ttctcagtgg 301 attcacccga ttcgctagaa aatattcctg aaaaatggac cccagaggtc aaacactttt 361 gtccaaatgt tccaatcatt ttggtaggaa ataagaaaga tttgcgaaat gatcccaaca 421 caattcggga tctagcaaaa atgaagcagg agccggtgaa gccgcaggag ggtcgcgcca 481 tggccgagaa gattaatgcc tttgcctatt tggagtgttc ggctaagtcc aaggagggtg 541 tgcgagatgt tttcgagacg gcaactaggg ccgcgctgca agtcaaaaag aggaagaaga 601 ccagatgcct tttgctctaa aagagcaaat caacaacatg aaaatctttg ccacacacac 661 acacacacag caacaacaac agcataaaca cacacacaaa cacacataca caccttttac 721 aacaataacg agctgaacaa caaccactca acaacaacat caaaaaaaaa gttgaattca 781 agccgaactg gtacagtttg cctactttaa gaaggtgctg gataaggatc gccccagcaa 841 gcgtcgtcgc aacagcggct ccgatgcgga ggatgacaac ggtgaggcat ctagccagcg 901 ctcaccatgc gacgctccaa acgcacacgc acagcgaccg tcggtgccga tagcgatgag 961 gaggatattg agccaccaca gccggatgct ggcgatttga cgcgtgcgaa acgcgtcgtt 1021 ctctgcccgc tcgctcggtc gccatgctga tggccagccc ctccagtgag gagcagtcgg 1081 tggccacatc gaccacggag ccggccatca ttagcgatcg ccgcctgggc gagttcaaga 1141 acaatttgca gcgactgttt cgcgaggcac gcgaacagag cttggcgctg gccaggatca 1201 ccacggccat caacgttggc agccaggagc cgttcaccgc tggcgaaatc gaggccgccg 1261 tgcatcgcat gaccgaggac aatcagatca tggtcgccga cgatatagtc tttctcatct 1321 gatcgcgcat tccaaggagc aacaatcgaa cgaacgattg catccatcaa tccatccttt 1381 atccatcaac cattctagcg cttaagttgt catttttgtt ttgtatttat ataaaaaaaa 1441 aaataaacac tttggaactc ccattgc // LOCUS DRORNP70K 3569 bp DNA INV 15-SEP-1990 DEFINITION D.melanogaster U1 70K small nuclear ribonucleoprotein gene, complete cds. ACCESSION M31162 NID g158314 KEYWORDS ribonucleoprotein; small nuclear RNA protein. SOURCE D.melanogaster (strain Oregon R) DNA, clones lambda D331.[1,2]; and adult head, cDNA to mRNA, clones pBS9.[1,3] and lambda R3-2.1. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3569) AUTHORS Mancebo,R., Lo,P.C.H. and Mount,S.M. TITLE Structure and expression of the Drosophila melanogaster gene for the U1 small nuclear ribonucleoprotein particle 70K protein JOURNAL Mol. Cell. Biol. 10, 2492-2502 (1990) MEDLINE 90258833 COMMENT Draft entry and computer-readable sequence for [1] kindly submitted by R.Mancebo, 09-JAN-1990. FEATURES Location/Qualifiers source 1..3569 /organism="Drosophila melanogaster" /db_xref="taxon:7227" prim_transcript <1..2259 /gene="snRNP27D" /note="snRNP mRNA and intron (alt.)" prim_transcript <1..3367 /gene="snRNP27D" /note="snRNP mRNA and intron (alt.)" gene 1..3569 /note="small nuclear ribonucleoprotein at 27D" /gene="snRNP27D" /allele="" /db_xref="FlyBase:FBgn0003458" misc_feature 103..182 /gene="snRNP27D" /note="RNA recognition motif" /db_xref="FlyBase:FBgn0003458" intron 488..566 /gene="snRNP27D" /note="U1 70K snRNP, intron A" /db_xref="FlyBase:FBgn0003458" CDS 614..1960 /gene="snRNP27D" /note="U1 70K small nuclear ribonucleoprotein, (first expressed exon)" /codon_start=1 /db_xref="FlyBase:FBgn0003458" /number=2 /db_xref="PID:g158315" /translation="MTQYLPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFM ADFEDPKDTPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFR TLFIARINYDTSESKLRREFEFYGPIKKIVLIHDQESGKPKGYAFIEYEHERDMHAAY KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSGREDNERE RERYRLEREREDREGPGRGGGSNGLDARPGRGFGAERRRSRSRERRDRERDRGRGAVA SSGRSRSRSRERRKRRAGSRERYDEFDRRDRRDRERERDRDREREKKKKRSKSRERES SRERRERKRERRDRERGTGSGGDVKERKPDFRDMDVIKIKEEPVDDGYPTFDYQNATI KREIDDEDEEKYRPPPAHHNMFSVPPPPILGRGNASTNPNPDNGQQSSGDPSWWRQ" BASE COUNT 972 a 839 c 919 g 839 t ORIGIN Chromosome II; map position 27D1,2. 1 gcatgaagga aaatattcta caaaaaactt caattttata aaattcattt aaaatacaaa 61 attgtacgta aacttaacgt aaccgttact cagttatgga atgtgtgagc gagatggtga 121 agcagcagca agtgatgtag caaattgcaa ttgaacgcga gtgggaaaag gggcaactat 181 aaaaccgaga aacttgcttt tagcatggat tcgaacccct tatttatagt actctggatg 241 tccgagacac acacctattt gtggtattta tattttataa cgtaagtagt atatttaatt 301 actaatcagt atttcatgcg gaattcttcc gcttaattca tagaccgcgc gggggtcaca 361 cttgctactc aagccaggcg aaaaactaaa gaaaatcggg aaaatacttg gtctgcaccg 421 aattatattg ctggtactta aacgaagtac cctagattta ttcttgccaa gcggatggct 481 gtttaaggtg agttgcgcca gcgcttacta tcccttgtgg agtaaacaaa ctccaaccta 541 acctcaaact gaccgttttt ttgcagacga ggaacttcag gaaaaggtaa aacaaaacaa 601 aaaagcccac aaaatgaccc aatatctgcc gccgaatctg ctggcgctgt tcgcggcacg 661 ggagcccatc ccgttcatgc cgccggtgga caagctgccg cacgagaaga agtctcgcgg 721 ctacctggga gtggccaagt tcatggccga tttcgaggat cccaaggaca cgccgctgcc 781 gaaaacggtg gaaacgcgtc aggagcggct ggagcgacgc cggcgcgaga aggccgagca 841 ggtggcctac aagctggagc gtgagatagc gctgtgggac cccacagaga tcaaaaatgc 901 cacggaggac ccgtttcgca cgctgttcat tgcacgcatc aactacgaca cgtccgagtc 961 gaagctgcgg cgtgagttcg agttctacgg gcccatcaag aagatcgtcc tgatccacga 1021 ccaggaatca ggtaaaccca agggctacgc cttcatcgag tacgagcacg agcgggacat 1081 gcatgccgcc tacaagcacg ccgatggtaa gaagatcgac agcaagcgcg tcctggtgga 1141 cgtggagcgg gctcgcacgg tcaagggctg gctgcctcga cgcctgggcg gcggtctggg 1201 tggaacgcgc cgcggcggca acgatgtcaa cattaagcac tccggccgcg aggacaacga 1261 gagggaacgc gagcgctacc ggctggagcg ggagcgtgag gatcgcgagg gtcctggacg 1321 cggcggcggc tccaatggcc tggatgcccg gcccggacgc ggtttcggtg cggaacgtcg 1381 acgttcccgc tccagggaac gccgcgaccg tgaacgagat cgcggacggg gcgctgtggc 1441 tagcagcggt cgctcgcgca gccgttctcg cgagcgcaga aaacgacgag cgggcagccg 1501 ggagcggtac gacgagttcg accgccgcga tcggcgggac agggagcgcg agcgtgatcg 1561 cgatcgcgag cgtgagaaga aaaagaagcg ctccaagtct cgcgaacgcg aatcctccag 1621 ggagcgtcgc gaacggaagc gagagagaag ggaccgtgaa cgcggcaccg gatccggcgg 1681 cgatgtcaag gagcgcaagc ccgatttccg tgatatggat gtcatcaaga tcaaggagga 1741 gcccgtcgac gatggctatc ccacatttga ctaccagaac gcgaccatca agcgtgagat 1801 cgacgatgag gatgaggaga agtaccggcc gccgcctgcg catcacaata tgttcagtgt 1861 gccgccgccg cccattttgg ggcgtggaaa tgccagcacg aatcccaatc ccgacaatgg 1921 ccagcagagc tccggcgacc cgagttggtg gcgtcagtag agtcttggag cgatgtgtca 1981 aggttaatat ttctagaagt cagacgtctg tgggtcgcaa ctatttattc attcgactcc 2041 gaggcacccc aatcctggag agcctaaccg tagctatcca ttttacacag aaaattttaa 2101 ggtaccactt ggaggagggc caagtagaac aagattatag aaaacccgac cgctaaacgc 2161 agaatccgct aatgtgtgcg tagcttaaat cacttaaatt tataagtaac tcttaacaaa 2221 tgaatatgaa aacagtaagt aaaataaagc tagccctcat gtgtttgttt ccccaccttt 2281 ggtaaggggg ttaaagggaa tacggagagt caggagctgg aacgctttcg gtggcgcata 2341 caccgtacta tatggttact ccatcccatg gtggttcctg ggattttcta actcacctaa 2401 cataataagc tgaacaatac aaacccttgc actaactcgt gccttttatt ttctctgttt 2461 ttttgcagtt ttcaatcaat tgaaaatctg actctgacta gtgtgaaagc aaaagcataa 2521 gtatttaatc aaacaaacag taatccaaaa acggaaatta gttccgccag tattcgtagc 2581 ccatgcccaa gtctaaattc caagcccaca tcaggtaatt tggtctacgc acaaacctca 2641 ctaatccatg cgtctaccgt tctaggacag ctctagaatc aagacagcta ccgcaatact 2701 tttccaatct cctccgctct gggttgcctg tgttgtgtgg tggtgtggcg tgtaagttga 2761 ttccgggcta agaaattttg taaaccaaaa ccttttccgt aagtttgccc cggtaagatt 2821 acgatatcct cgcctaaccg ccgtggatcg gatggatgag tgagttagtg taagggagct 2881 ttcctctgtt tggtacacat tgcgaactgc tccgatggcc tgtggcaatc tactccattc 2941 atccattatg tctgtaacca atttaccatt tcgatctttt catgtacgtt gagctgattg 3001 ttatcgtact gaagacgaat ccgcggcgga aactcgcata gaacaaacag aaaactgcgc 3061 aaaggtttgc ttttggtaac tggtaacgat tggttgtggt tggtcaggtc aggggtcttt 3121 cgagctggtt agcctccact ttggattgcg gacggtgaca aaattctggg ggtcttttat 3181 ttttgtattg tattgtttgg cagacaggat ccatgcaatt gccttttcgt accgtgcgac 3241 atacgggaaa caaactatcg tgtagcaggg catttttcct attacaccat tattaagaaa 3301 agcggacaga gatcaatgtc acatttagat ttgatcaaat aaagaaaaga attcctcctt 3361 acacgaaaaa gtacttgttt catttctaag tatttatcaa gatgacttga attttttaca 3421 attttcgctt gttaaactgg tctatatgtc ctggataaga tttgcagtgg cgtccttgga 3481 atctctaaaa atgtatacat ttgttgcaaa taaagcattg tgaaatctat ggacattaaa 3541 tgcgacctct attggaaaac attcacata // LOCUS DRORPIIPD 700 bp DNA INV 30-SEP-1988 DEFINITION D.melanogaster RPII215 gene encoding RNA polymerase II subunit, 5' end; P element insertion. ACCESSION M20240 NID g158327 KEYWORDS RNA polymerase II. SOURCE D.melanogaster DNA, clone lambda-DmRpII16-4.1 and subclone p16-4. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 700) AUTHORS Searles,L.L., Greenleaf,A.L., Kemp,W.E. and Voelker,R.A. TITLE Sites of P element insertion and structures of P element deletions in the 5' region of Drosophila melanogaster RpII215 JOURNAL Mol. Cell. Biol. 6, 3312-3319 (1986) MEDLINE 87089662 FEATURES Location/Qualifiers source 1..700 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..700 /note="RNA polymerase II 215kD subunit" /gene="RpII215" /allele="" /db_xref="FlyBase:FBgn0003277" repeat_region 327..334 /note="direct repeat copy A" repeat_region 335..350 /note="inverted repeat copy A" repeat_region 354..369 /note="inverted repeat copy B" CDS 354..488 /gene="RpII215" /note="RNA polymerase II subunit." /codon_start=1 /db_xref="FlyBase:FBgn0003277" /db_xref="PID:g158328" /translation="MLFHHGPACQQQTVIVYPAFYLGFRVFRAPSFPFPVVSLAFCTR " repeat_region 370..377 /note="direct repeat copy B" BASE COUNT 200 a 172 c 146 g 182 t ORIGIN 1 ctaaaagata gttcaaaata ttcaacaggt actggccttt ctcactgact atgagagtca 61 atttgatttt aatgtgctga tttaatttat ttgttaaatt actaactaat actaatagat 121 atatttatat aaaagatata gctaaaaaac gtcagtctgg caaccctgct acaaacgacc 181 gcaatatggt atggtatttc gccgctcgcc ctgcagtcac acttttcggt cggcgttgtc 241 cgcattttca catcgcatcg cgtctgaaaa aacgggctaa ttcgcattcg caatcgcctg 301 tagggcccga ctggtataga atgcacgccc agcgcatgat gaaataacat aacatgttat 361 ttcatcatgg cccagcgtgc cagcaacaaa cagtgattgt ttacccagcc ttctatttgg 421 gctttcgcgt ttttcgagct ccttcttttc ccttcccggt cgtatccctt gccttttgca 481 cgaggtgaaa agtgtgacga cgcagcagaa aaagcaaaag caaaaaaaag gtggaacaaa 541 aaaaaaccgc acacacacac cgaaagccag gctccacttt ggtctagtgg ccaccagtat 601 cgctgacgac caggatgagc acccccacgg actcgaaggc gccgttgcgc caggtgaagc 661 gcgtacagtt cggcattttg tcccctgatg aaattgtaag // LOCUS DROS1C4 3525 bp DNA INV 15-JUL-1993 DEFINITION D.melanogaster beta-amyloid-like gene, complete cds. ACCESSION J04516 NID g158371 KEYWORDS beta-amyloid; membrane protein. SOURCE D.melanogaster (strain Canton S) adult head, cDNA to mRNA, clone c4. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3525) AUTHORS Rosen,D., Martin-Morris,L., Luo,L. and White,K. TITLE A Drosophila gene encoding a protein resembling the human beta-amyloid protein precursor JOURNAL Proc. Natl. Acad. Sci. U.S.A. 86, 2478-2482 (1989) MEDLINE 89184650 COMMENT Draft entry and computer-readable sequence for [1] kindly provided by K. White, 31-JUL-1989. FEATURES Location/Qualifiers source 1..3525 /organism="Drosophila melanogaster" /db_xref="taxon:7227" CDS 153..2813 /codon_start=1 /product="beta-amyloid like protein" /db_xref="PID:g158372" /translation="MCAALRRNLLLRSLWVVLAIGTAQVQAASPRWEPQIAVLCEAGQ IYQPQYLSEEGRWVTDLSKKTTGPTCLRDKMDLLDYCKKAYPNRDITNIVESSHYQKI GGWCRQGALNAAKCKGSHRWIKPFRCLGPFQSDALLVPEGCLFDHIHNASRCWPFVRW NQTGAAACQERGMQMRTFAMLLPCGISVFSGVEFVCCPKHFKTDEIHVKKTDLPVMPA AQINSANDELMNDEDDSNDSNYSKDANEDDLDDEDDLMGDDEEDDMVADEAATAGGSP NTGSSGDSNSGSLDDINAEYDSGEEGDNYEEDGAGSESEAEVEASWDQSGGAKVVSLK SDSSSPSSAPVAPAPEKAPVKSESVTSTPQLSASAAAFVAANSGNSGTGAGAPPSTAQ PTSDPYFTHFDPHYEHQSYKVSQKRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKA AQSFKQRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALT EQPPNAHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLI DIDRAVNQSMTMLKRYPELSAKIAQLMNDYILALRSKDDIPGSSLGMSEEAEAGILDK YRVEIERKVAEKERLRLAEKQRKEQRAAEREKLREEKLRLEAKKVDDMLKSQVAEQQS QPTQSSTQSQAQQQQQEKSLPGKELGPDAALVTAANPNLETTKSEKDLSDTEYGEATV STTKVQTVLPTVDDDAVQRAVEDVAAAVAHQEAEPQVQHFMTHDLGHRESSFSLRREF AQHAHAAKEGRNVYFTLSFAGIALMAAVFVGVAVAKWRTSRSPHAQGFIEVDQNVTTH HPIVREEKIVPNMQINGYENPTYKYFEVKE" BASE COUNT 957 a 979 c 977 g 612 t ORIGIN 1 bp upstream of EcoRI site; chromosome X. 1 gaattccgca aatacaatta accagaactg gaagcacgtc agtccagccg cagaagcagc 61 taagttcaga ccaaactcgg agattcccag ccaggagata ggaccaggag ccaaccagac 121 gaggagcaaa gaagcagaaa agagtgcgaa caatgtgcgc cgcgctgcgt cgtaatttgt 181 tgctgaggag cctctgggtc gtcctggcca ttggcactgc tcaggttcag gccgcctcgc 241 cgcgatggga gccccagatt gccgttctct gtgaggccgg acaaatctac cagccgcagt 301 atctttccga ggagggacgc tgggtgacgg accttagcaa gaagacaacc ggtcccacat 361 gtttgcgtga taaaatggat ttgcttgatt actgcaagaa ggcctatccc aaccgagaca 421 taaccaacat tgtggagtcg tcccactacc agaagatcgg cggctggtgt cgccaggggg 481 cattgaatgc ggctaagtgc aagggatccc accgatggat caagccattc cgctgtctcg 541 gaccattcca atctgacgcc ctgctagttc ccgagggctg tctgttcgac cacatccaca 601 acgcctcccg atgctggcca tttgtgaggt ggaaccaaac cggagcagcc gcttgccagg 661 agcgcggaat gcagatgcgc acgttcgcca tgcttctgcc ctgcggaatc tcggtcttct 721 ccggagtgga gttcgtctgc tgtcccaagc acttcaagac cgatgaaatt catgtaaaga 781 agaccgactt gccggtgatg ccggcagctc agatcaatag cgccaatgac gagctgatga 841 atgacgaaga cgacagcaac gactcgaact actcgaagga tgccaatgaa gacgatctgg 901 acgatgagga tgatttgatg ggtgatgatg aggaggacga tatggtggcg gatgaggcag 961 ctaccgcagg cggaagcccc aacaccggtt cctcaggtga ctcaaatagc ggatctttgg 1021 atgacataaa tgcagagtac gatagcggag aggagggtga caactacgag gaggacggtg 1081 ctggttccga aagcgaggct gaggttgagg cctcctggga tcagagcgga ggggcgaagg 1141 ttgtgtccct aaaaagcgat tcctcatccc cgtctagcgc tccggttgct cccgcccccg 1201 agaaggcacc tgtgaagtcc gaatcggtca cgagcactcc tcagctgtct gcctctgccg 1261 ctgcttttgt agctgccaat tctggaaact cgggaaccgg agccggagca ccaccatcca 1321 ctgcacaacc cacatcggat ccctacttca cccattttga tccgcactac gagcaccaga 1381 gctacaaagt aagtcagaaa cgccttgagg aatcgcaccg cgagaaggtc acgcgcgtta 1441 tgaaggactg gtccgatctc gaggagaagt accaggacat gcgcctagcg gatcccaagg 1501 cagcccagtc atttaagcag cggatgacgg ctcgcttcca gacttctgtt caggcactcg 1561 aggaagaagg caacgccgag aagcaccagc tggccgccat gcaccagcag cgcgttttgg 1621 cccacatcaa ccagcggaag cgcgaggcca tgacctgcta cacccaggcc ctgactgagc 1681 agcccccgaa tgcccaccac gttgagaagt gtctacagaa gctgctgcgc gccctgcaca 1741 aggaccgggc ccacgccttg gcccactacc ggcacctatt gaactctgga ggacctggtg 1801 gactagaagc agctgcttcg gagcgtccac gcacgctgga gcgcctaatc gacatcgata 1861 gagccgtaaa ccagtcgatg accatgctca agcgctatcc ggagctctcc gccaagattg 1921 cccagctgat gaatgactac attctggcac tgcgcagcaa ggatgacatt cccggctcct 1981 cgctgggaat gagcgaggag gcggaggccg gcattctgga caagtaccgc gtcgagatcg 2041 agcgcaaggt ggccgagaaa gagcgactac ggctggcgga gaagcagcgc aaggagcagc 2101 gtgccgctga gcgggaaaaa ctgcgcgagg agaagctgcg cctggaggcc aaaaaggtgg 2161 acgacatgct caagtcacag gtggccgagc agcagtccca gccgacccag tcgtcaaccc 2221 aatcgcaggc gcagcagcag cagcaggaaa agagccttcc cggcaaggag ctgggtcccg 2281 acgcagctct ggtcacagcg gccaatccca acctagagac caccaaaagc gagaaggatc 2341 tgtcggacac tgagtatggg gaggcaacag tgagcacgac caaggtgcag accgtgctgc 2401 caacggtcga cgacgatgcc gtccagcggg cagtggagga cgtagccgcc gccgtcgccc 2461 accaggaggc cgagccgcag gtgcagcact tcatgaccca cgacctgggc caccgcgaat 2521 cgagcttctc gctgcgccgc gagttcgcgc aacatgcaca cgcggccaaa gagggccgca 2581 acgtctactt cacgctctcc ttcgccggga tcgccctgat ggcggccgtt ttcgttggcg 2641 tggccgtggc caaatggcga acatcgcgct cgccgcacgc ccagggcttc atcgaggtcg 2701 accagaacgt cacaacacac catcccattg tgcgcgagga gaagatcgtg cccaacatgc 2761 agatcaatgg gtacgagaat ccgacctaca agtatttcga agtgaaagag taagcgagat 2821 ggcaagatgg cagcatgggc gcggctggca agagcgagcg agtggcacac atcaacaaca 2881 acagtaaacg caactgcagc caccgcgatt tcaaaatgga aaaacttaag cgtattatta 2941 aagcagatgg gaagagaaat gatttttttt cgtgaaatga gcgcagtttc aataagaaag 3001 aatgaaaggg tagaagaaga aagataaatt caataaatgg taatatatct atatattaaa 3061 ttaaagcaag cagaaaggca acaatataaa gcaagcaatt aaatttaagt atttgaatgt 3121 ttaacaaaac gccgtaaaca tcctttccag ctctctcttt ctcttcccct gtctctgtct 3181 ctgtcccatc accacacaca cacacatcaa caacaatggc acacactcac acacacttgc 3241 ctctaacttt gtgattcttc ttgagcgcca cgtacgcaaa gagagtagaa gtgctgaagt 3301 gaagatcata cacgcagccg aacgaagagt ggtggagcgg gggaggagag gatggagaag 3361 agcggaagaa gagcaaaaca aaagatattc ctagtaaata aattgtcgac acacacatca 3421 catccacatt caaacaccga gtcacccgca gaacagtcac acccacactc acacatacag 3481 tgtcaggaat gcgcaaaaaa gacacaaacg cattcatgcc tgctt // LOCUS DROSCA 3568 bp DNA INV 12-MAR-1991 DEFINITION D.melanogaster scabrous protein gene, complete cds. ACCESSION M60065 M37703 NID g158401 KEYWORDS scabrous protein. SOURCE D.melanogaster eye disc, cDNA to mRNA, and DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 3568) AUTHORS Baker,N.E., Mlodzik,M. and Rubin,G.M. TITLE Isolation and expression of scabrous, a gene regulating neurogenesis in Drosphila JOURNAL Genes Dev. 4, 1848-1861 (1990) MEDLINE 91115075 FEATURES Location/Qualifiers source 1..3568 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /tissue_type="eye disc" mRNA 672..3541 /partial /gene="sca" /db_xref="FlyBase:FBgn0003326" gene 672..3541 /note="scabrous" /gene="sca" /allele="" /db_xref="FlyBase:FBgn0003326" CDS 1067..3391 /gene="sca" /codon_start=1 /product="scabrous protein" /db_xref="PID:g158402" /translation="MAGSNVLWPILLAVVLLQISVAFVSGAASGGVVLSDVNNMLRDA KVVTSEKPVVHSKQETEAPESSVELLRFVDDDEDSEDISSIERQDGRTMESKKMADQV RLLTKQLNALMLRRREDYEMLEHNLRKSLRLTTNANSVDADMRSELNQLREELAALRS SQSGNKERLTVEWLQQTISEIRKQLVDLQRTASNVAQDVQQRSSTFEDLATIRSDYQQ LKLDLAAQRERQQQTEVYVQELREEMLQQEQDFQHALVKLQQRTRKDGSSASVEEESC SQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRNLRRQVNGLRFHHIDERVRSI EVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLEF ANAQITSEQSLIREEGTNAARSLQAMAVSVSVLQEEREGMRKLSANVDQLRTNVDRLQ SLVNDEMKNKLTHLNKPHKRPHHQNVQAQMPQDDSPIDSVLAETLVSELENVETQYEA IINKLPHDCSEVHTQTDGLHLIAPAGQRHPLMTHCTADGWTTVQRRFDGSADFNRSWA DYAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADG YRLHIAEYSGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNG RYNLGLTWFDAARNEWIAVKSSRMLVKRLPAVECQANASASGAFVSVSGSAADAAPSS GATTTTTTATAAPATVTTPKTNNSVVQFVAAGQA" repeat_unit 3291..3320 /gene="sca" /db_xref="FlyBase:FBgn0003326" /rpt_family="CAX (opa)" BASE COUNT 859 a 960 c 994 g 753 t 2 others ORIGIN 1 gaattccaaa gacaataggg agttttcctg ctgcagtttc ttttgtgcgc ctatgggctg 61 tccttcctcc ttgcaactac ccgtactcgg gacatttggc tccgtctggt ttttgttcgt 121 cttgcagtat atctagcaca tcagcatgtt ttcgcacttc gccttctgtc tgcctgcctg 181 cctatggggc cgaaacatct gccgttttcg ttgcagtttg ttttcgctgt agtctcaccg 241 caaccgcgcc atgtgtcagg agcaggatga gtgcaaaaaa gaagcaccgg gtaactagac 301 cgccattttg tgttgctctc gttcgctatc tgaaactccg aatggtaact gctgccttaa 361 agacatgatc tttggtaata gcaaacattt caaaggacat ttttcgggca tctaacatcg 421 agtttattca ttgattttct cttaacttga tgcgttctct ttgtcgctct ctttcctgct 481 tgttgcatgc ttcgggcagg tggctgctct cttcggcact cttccccggc aattcccccg 541 cttaatttac cattgccttt accgcaactt cgtactcgtc tgctctctcg ctttagccga 601 agcgtgccga acgaagccga gcattcggca tggcagcgaa taaaaggaag tgccgaagac 661 gcgccgcttc agtccttcga agaacgccgc gctgaaaaca tccttccatt ggaaggtgct 721 ctagtgaaat cggtgatata cttcatccag tgctgcgagc gaactttccg tggaccaaaa 781 gtgaaaagaa cagctaagcc aagcaacaag gattaagccc gaggcaacgc ctggaataat 841 tgtagcattg tttgccagca cctttttata aggtgttttt gactgtcacg gcgccggaaa 901 gtcaaggaga attgtttgtg tgtcggcatg cgtgccagtt atttgcataa attgcccatc 961 taactcgaga nccctttttt gtacggtgtg aatgagagat tggcaaacat tcccggacct 1021 ccaaaaaaag aaagtttcgc gtgaccattt aaattgccct gcaacaatgg caggttcaaa 1081 cgttttgtgg ccaatactcc tggccgtggt gctgctccag atatccgtgg cattcgtgag 1141 tggagcggcc agtggtgggg tagtccttag cgacgtgaac aacatgttgc gcgatgccaa 1201 ggtggtgacc tcggagaagc ccgttgtgca ctcaaaacag gaaacggaag cgccggaatc 1261 cagcgtggag ctgctccgct tcgtcgatga tgacgaggat agcgaggaca tcagctccat 1321 tgaacggcag gatggcagga caatggagag caaaaaaatg gccgatcagg tgcgcctgtt 1381 gaccaagcag ctcaacgccc tgatgctgcg gcgccgcgag gattacgaga tgctggagca 1441 caatctgcgc aaatccctgc ggctcaccac gaatgcgaac agcgtggacg ccgacatgcg 1501 cagcgaactg aaccaactca gggaggagct ggccgcgctg cgctcctcgc agagtggcaa 1561 caaggagcgc ttgaccgtcg agtggctgca gcagacgatc tccgagatcc gcaaacagct 1621 ggtggatctg caaaggacgg ccagcaacgt ggcccaggat gtccagcagc gcagctccac 1681 ctttgaggat ctggccacca ttcgcagtga ctatcagcag cttaagctag atctggccgc 1741 tcagcgcgag cgccagcagc agacggaggt ctacgtccag gaactgcgcg aggagatgct 1801 ccagcaggag caggacttcc agcatgccct cgtcaagctg cagcagagga ctcgcaagga 1861 cggctcatcc gccagtgtgg aggaggagag ctgtagccag gaagccaacc aggagcaaac 1921 cggacttgaa accactgctg atcacaagcg acgccattgc cgttttcaga gcgaacagat 1981 ccaccagctg caactggccc agaggaacct gcgccgccaa gtgaacggat tgcgcttcca 2041 ccacatcgac gagcgggttc gcagcatcga ggtggagcag cacaggattg ccaatgccaa 2101 ctttaatttg agcagccaga tcgcttcgtt ggacaagctg catacctcga tgctggagct 2161 gctggaagat gtggagggcc tccagaccaa gatggacaag agcataccgg agctgcggca 2221 cgagatctcc aagctggagt tcgccaatgc tcagatcacc tcggagcaga gtctgatcag 2281 ggaggagggc actaatgcgg cacgatccct gcaagccatg gctgtaagcg tcagtgtcct 2341 gcaggaggag cgcgaaggta tgcggaagct gtccgccaat gtggatcagc tgagaaccaa 2401 tgtggatcga ttgcagtcgc tggtcaatga tgaaatgaag aataagctca cccacctgaa 2461 caagccgcac aagcgaccac atcatcagaa tgtccaggcg cagatgccgc aggatgattc 2521 gcccattgac tccgtcctgg ccgaaactct ggtcagcgag cttgagaacg tggagaccca 2581 gtacgaggcc attatcaaca aactgccgca cgactgcagc gaggtgcaca ctcaaacaga 2641 cggactgcat ctgattgcgc ccgccggcca acggcatccg ctgatgacgc actgcaccgc 2701 cgatggatgg acgacggtgc aaaggcggtt cgatggcagt gcagacttca accgctcgtg 2761 ggcggattat gcccaaggat ttggggcgcc aggcggtgaa ttctggattg gcaacgagca 2821 gctgcatcac ctgaccctgg acaactgcag tcggctgcag gtgcaaatgc aggacatcta 2881 cgacaacgtt tgggtggccg agtacaagcg attctacata tcctcgcgag ccgatggcta 2941 tcggctgcac attgccgagt actccggcaa cgcctcggat gcactgaact accaacaggg 3001 tatgcagttc tcggccatcg atgacgatcg ggacatctcg cagacgcact gtgctgctaa 3061 ctatgagggt ggctggtggt tctctcattg ccagcacgcc aatctcaatg ggcgatacaa 3121 tctgggcctg acttggttcg atgccgctcg caatgaatgg atagcggtca agtcaagccg 3181 aatgctggtc aagcgcctgc ccgccgtcga gtgtcaggcg aatgccagtg ccagtggcgc 3241 ttttgtttcc gtttccggtt cggctgctga tgctgcgcca tcgagcggtg caacaacaac 3301 aacaacaaca gcaacagcag cgccggcgac ggtaacgacg ccgaaaacca acaacagtgt 3361 ggtccagttc gtggccgccg ggcaggcgta agtgagctga tcccgccgtt aaagcgaggg 3421 aatgaaaacc gctacagtga accaccagag ccatgcctac tatagttgtg cgtccactgt 3481 ttgtctgtgg gaggtggatc taaaagatcg gtagataagt gtaaaaaata aacagaaaat 3541 cgaatgtcga agccccctcc ggbattcc // LOCUS DROSER1 258 bp DNA INV 14-JUN-1996 DEFINITION D.melanogaster serine protease 3 (SER3) gene, complete cds. ACCESSION M24380 NID g158409 KEYWORDS serine protease. SEGMENT 1 of 2 SOURCE D.melanogaster (strain Canton-S) adult DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 258) AUTHORS Yun,Y. and Davis,R.L. TITLE Levels of RNA from a family of putative serine protease genes are reduced in Drosophila melanogaster dunce mutants and are regulated by cyclic AMP JOURNAL Mol. Cell. Biol. 9 (2), 692-700 (1989) MEDLINE 89219063 FEATURES Location/Qualifiers source 1..258 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="adult" CDS 1..186 /note="serine protease 3" /codon_start=1 /db_xref="PID:g158412" /translation="MDGKATCQGDSGGPLVTKEGDKLIGITSFVSAYGCQVGGPAGFT RVTKYLEWIKEETGIYY" BASE COUNT 82 a 47 c 65 g 64 t ORIGIN Chromosome 3R, map position 99D1. 1 atggacggaa aggccacctg ccagggtgat tctggtggtc ctctggtcac aaaggagggt 61 gataagctta tcggaatcac ttccttcgtc tccgcttacg gatgccaggt tggaggaccg 121 gctggcttta ctagggtcac caagtacctg gaatggataa aggaggagac tggaatctat 181 tattaaaaaa agaactttac taatttcaaa gcaaaaaggt gcttaaaaca agttttaaat 241 aaatgaagaa catatgct // LOCUS DROSIST 980 bp DNA INV 21-OCT-1993 DEFINITION sis-Drosophila melanogaster sister-less-a (bZIP) protein gene, complete cds. ACCESSION L22755 NID g401734 KEYWORDS bZIP transcription factor; sisterless-a gene. SOURCE Drosophila melanogaster (strain Oregon R) DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 980) AUTHORS Erickson,J.W. and Cline,T.W. TITLE A bZIP protein, sisterless-a, collaborates with bHLH transcription factors early in Drosophila development to determine sex JOURNAL Genes Dev. 7, 1688-1702 (1993) MEDLINE 93380645 FEATURES Location/Qualifiers source 1..980 /organism="Drosophila melanogaster" /strain="Oregon R" /db_xref="taxon:7227" TATA_signal 69..74 /gene="sisterless-a" gene 69..881 /gene="sisterless-a" mRNA 100..881 /gene="sisterless-a" /note="there are no introns in this gene" /evidence=experimental gene 166..735 /gene="sisterless-a. sis-a" CDS 166..735 /gene="sisterless-a. sis-a" /note="potential bZIP; 'Sis-a. Putative bZIP transcription factor'" /codon_start=1 /function="'Transcriptional activator of Sex-lethal establishment promoter Pe'" /evidence=experimental /label=Sis-aprotein /product="bZIP transcription factor" /db_xref="PID:g401735" /translation="MERSHLYLPTLSYAAMGHVYAPYRGSSSPALSTASSTSSKPEQI EELVSQQLHHLKMHYADEEQRYVDQMLLENPIVVERRAPPPLKTELAMDCRGSGSGSG SGSGSDVKDAQRQRAESCRKSRYNNKIKKAKLRFRHKFVSGQLKKSAVMLDTMRDVIA QAERQLLERGYPAATLDRMRATFGLEMEQ" mutation 547 /gene="sisterless-a. sis-a" /note="g" /phenotype="'partial loss-of-function. Female-specific lethal'" /label=sis-a1-mutation /replace="" variation 696 /gene="sisterless-a. sis-a" /note="'Asp -> Glu; 'cDNA polymorphism'; g" /replace="" variation 720 /gene="sisterless-a. sis-a" /note="'cDNA polymorphism'; g" /replace="" 3'UTR 733..881 /gene="sisterless-a" variation 798 /gene="sisterless-a" /note="'cDNA polymorphism'; a" /replace="" variation 812..814 /gene="sisterless-a" /note="'cDNA polymorphism'; '' in variation" /replace="" polyA_signal 860..865 /gene="sisterless-a" BASE COUNT 267 a 246 c 241 g 226 t ORIGIN 1 ccattcatga aggtagaaac cgcgaataac ccatccagtg tccaatggca agctacctgc 61 ggaaatggta taaaacgggg ctgacatatt gcctaaggca gcattagcac acgaaatctc 121 gacgagagca gtcacagacc acgtcacaca tcgaaaaaaa tcaccatgga acggagtcat 181 ctttacttgc ccactctgag ctacgcggcc atgggtcacg tatacgcacc gtatcgcgga 241 agcagttcac ccgcactatc gacagcatcg tcaacatcat cgaagccgga gcagatcgag 301 gagctggtgt cccagcagct gcatcatctc aaaatgcact acgccgacga ggagcaacgc 361 tacgtagacc agatgctcct ggagaatccc attgttgtgg agcgccgtgc accgccgccg 421 ctgaaaacgg agcttgctat ggattgccgc ggatcgggtt ccggatcagg ttccggttct 481 ggttcggatg tcaaggatgc ccagcgtcag agggccgagt cgtgccgcaa atcccgctac 541 aacaacaaga tcaagaaggc caagctgcgc ttccggcaca aattcgtcag cgggcagctg 601 aagaagagcg ccgtcatgtt ggacacgatg cgggatgtga ttgcccaggc ggagaggcag 661 ctgctcgagc ggggatatcc cgccgccaca ctcgatcgga tgcgggccac tttcggccta 721 gaaatggagc agtgatatca tagtgtagct atgtgtcgca ggaacggatc cctgactagt 781 ccagcattag ccatacctct tttttttttt tcttgttgac tatatctagt atttatctaa 841 gcatattatt aaatttttaa ataaaattaa gaatcatatt gaaaacgaat gctttcttat 901 tcaaatattt gttatatgtt cgcacgatca gatggagtca aggataactt gttaatttca 961 ctttacaaga atttcccata // LOCUS DROSPLEPMC 1497 bp DNA INV 29-SEP-1992 DEFINITION Drosophila melanogaster split locus enhancer protein mC (E(spl)) gene, complete cds. ACCESSION M96168 NID g158496 KEYWORDS split locus enhancer protein mC. SOURCE Drosophila melanogaster (strain Canton S) (library: T. Maniatis's charon 4A) embryo DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1497) AUTHORS Delidakis,C. and Artavanis-Tsakonas,S. TITLE the enhancer of split [E(spl)] locus of Drosophila encodes seven independent helix-loop-helix proteins JOURNAL Proc. Natl. Acad. Sci. U.S.A. 89, 8731-8735 (1992) MEDLINE 92409590 FEATURES Location/Qualifiers source 1..1497 /organism="Drosophila melanogaster" /strain="Canton S" /db_xref="taxon:7227" /dev_stage="embryo" /tissue_lib="T. Maniatis's charon 4A" gene 581..1102 /note="E(spl) region transcript m&dgr" /gene="HLHm&dgr;" /allele="" /db_xref="FlyBase:FBgn0002734" CDS 581..1102 /gene="HLHm" /codon_start=1 /product="split locus enhancer protein mC" /db_xref="PID:g158497" /translation="MAVQGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVD TMDAQGEQVSKLEKADILELTVNYLKAQQQQRVANPQSPPPDQVNLDKFRAGYTQAAY EVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQEEEIIDMAEEPVNLADQKRSKSPRE EDIHHGEEVWRPW" BASE COUNT 454 a 325 c 305 g 413 t ORIGIN chromosome 3R; 96F 11-14. 1 aagctttgat taaaaataaa ttaatttcta aatatataaa agtttctaaa gtacaataaa 61 actatttttt ctttgtttat acttatcgtt gtaagatact ttagatgcat gagaaacttt 121 ggtttccaga atggacatcc aaagagtatg cttcgaaact tgtatatttt aaaagtagtt 181 tatataaagt atagatttta aaaattgttc tctgccacat atggattgtt ttcagtgcaa 241 gaagagagcc tcagcgcttc ccgcccgatc caattttttt gatgttgcac acgtgcaacg 301 ccgagggaat cttgccacaa gcagagagtg acccgattga tgcttcgttg tgatcgtcgg 361 cgtgtaggag cgttgtgatc gcagtgcgtg gtggcagtta gggaggattt cgatttcgca 421 agtgtacggc accagcagct acaaaaagga tcagcttacc ttgcggcaag atcatttctc 481 aagtgactac cgtgcagtgc ggagcggcag cagcgacatc gcaacatcgc aactttattt 541 acaaacaatc accacaccaa atcaaaaccc attatacaca atggccgttc agggtcagag 601 atttatgacc aagactcagc attaccgcaa ggtgaccaaa cccctcctgg agcgcaaaag 661 acgcgcccgg atgaacctgt atctggacga actcaaggat ctcatcgtgg acaccatgga 721 tgcgcagggc gaacaggtca gcaagctgga gaaagctgac atcttagagc tcaccgtcaa 781 ctatctgaaa gcgcaacagc agcagcgagt ggccaatcct caatccccac cacccgacca 841 agttaacctg gacaaatttc gggccggata cacccaggct gcctacgagg tctcgcacat 901 attctctacg gttcccggct tggatctcaa attcggcacc cacctgatga agcaattggg 961 tcaccagctc aaggacatga aacaggaaga agaaatcatc gatatggccg aagaaccagt 1021 taatctagcc gaccaaaaac gttcaaagtc tccgcgagaa gaggatattc atcatggcga 1081 agaagtctgg cgcccctggt gaagggcatt ccatatatac gcaaccaatt aacattgata 1141 gctttactac tcagtttcat taagaaacaa tccaagtttt ccaaggtcta gtgtaaacat 1201 ttgcctcaga atcgtattta gttggtagtt gatttgatat gatgtgatgt tcctgtgata 1261 gttcttaagt tcgtattttg tatttgatct cccataggct tactgattca tgtatttaat 1321 tcattgtaat ttatttcatc aactttgcaa gagcttcccc accgagcttc cacttagcct 1381 cattaagaac aaatttttgt gtatgtttta aaattatatt tttcgcttta caccattaag 1441 tataagccat gaacatttga ataataaaat gaacgtaaac tgaaatttta aaagctt // LOCUS DROTFIISAA 2210 bp DNA INV 26-MAR-1996 DEFINITION Drosophila melanogaster transcription elongation factor (TfIIS) gene, complete cds. ACCESSION L26091 NID g416354 KEYWORDS transcription elongation factor. SOURCE Drosophila melanogaster adult DNA. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 2210) AUTHORS Oh,Y., Yoon,J. and Baek,K. TITLE Isolation and characterization of the gene encoding the Drosophila melanogaster transcriptional elongation factor, TFIIS JOURNAL Biochim. Biophys. Acta, Gene Struct. Expr. 1262 (1), 99-103 (1995) MEDLINE 95290504 FEATURES Location/Qualifiers source 1..2210 /organism="Drosophila melanogaster" /db_xref="taxon:7227" /dev_stage="adult" gene 1124..1915 /note="RNA polymerase II elongation factor" /gene="TfIIS" /allele="" /db_xref="FlyBase:FBgn0010422" CDS 1124..1915 /gene="TfIIS" /note="longest ORF" /codon_start=1 /product="transcription elongation factor" /db_xref="PID:g416355" /translation="MTVNELRKSSKDDEVIALAKTLIKNWKRFLASPAPTTPNNSSAK EGSSNNSSASKSTSAAKSSSSISGKDKSSSSSSSKDKEKKGSTSSSQTSFPSGGMTDA VRIKCREMLATALKIGEVPEGCGEPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANL KDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT KTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC" BASE COUNT 672 a 547 c 497 g 494 t ORIGIN 1 gaattcctct ttatttttat acaatataat tttattttac gttaagcaac caatttaagg 61 gctatgaaac gtagtaacta acaggagcaa cgaagataac atggaaacat acaaaatttg 121 tataaaaata ttgattagat atagtttggc ttgtttatgc cacgtgtcca aagatatctt 181 tgatgacgcc tcctcagtgt tctcctggtt gtctggtacg tgcctgattt gatttgttct 241 caaactgaag gtggatgctg aggtcatgtg cgatatcaac atttctcgcg taccagggcg 301 cgttggtgat tgttcgcaac cgcttggttt tgtcccaccg ccgatttgac cgcagacgta 361 tcccgcttgt cccctacaac cgcacttcat cataatacat catctctaga ccacactcaa 421 acgatttatt tattaaaact aagtgatata tagggaattg ttattgaagg taattagtat 481 aattcaaaaa cgcccaacac gctgttcttt cattgaaata cagtggagcc cagcttgcaa 541 gcagtgcaag tttaaaaaaa catcgcaatg ctatgtgtgt gtactcgctt aaaaggcaga 601 tgtacattaa aatacggtaa cactgttgac ttctgaaacc caaactactt ccagttggga 661 attgtattag ccatgggaag gtatttcttg acaagccacc gcccggtaac actaaaacgc 721 gttagggtgt tctgtcaact tgttctgcga atacagaaac gaaaaaaata gtaaacaaca 781 tttattggag ggaaaaaaag aaatagccca gcttccgcat aaacaactgt cgcagacccg 841 cagcaccgat taaagccgac agccgacgcc agttaaccta acctctgatc aaattaagtg 901 ggccaaaatg agcgtggagg aggaagtgtt tcgaatccaa aagaagatga gcaagatggc 961 cagcgacggc acagtaagta tcgggattag ctaacgtgcc gcgcatcatg tcacaaatat 1021 acatatatcc accgtacagg gacaggatca ggctctggac ctgctgaagg ccctgcaaac 1081 gcttaacatc aatctcgaca ttctgaccaa aacgcgcatc ggcatgaccg taaacgagct 1141 gcgcaagagt agcaaggacg acgaggtgat cgctctggcc aagacgctga tcaagaactg 1201 gaaacgcttc ctggccagcc cggcgccaac cactcctaac aacagctccg ctaaggaggg 1261 ctcctccaac aacagcagtg cctcgaagtc caccagtgcc gccaagtcgt cgtcgtcaat 1321 ctccggcaag gataagtcca gttcatccag ctcatccaag gataaagaga agaaaggctc 1381 gacatcctcg tcacagacct cgtttccctc cggcggcatg acagatgcgg tccgcatcaa 1441 atgccgcgaa atgctggcca ccgcactgaa gattggtgaa gtgcccgaag gatgcggtga 1501 gccggaggaa atggccgccg aactggagga tgccatttac tccgagttca ataacacgga 1561 tatgaagtac aagaatcgca ttaggtcacg cgtggccaat ctgaaggacc ccaaaaatcc 1621 tggattgcga gggaacttta tgtgcggcgc cgtcactgcc aagcagctgg ccaaaatgac 1681 gccggaggag atggccagcg acgagatgaa gaagctgcgc gagaagttcg tcaaggaggc 1741 catcaacgat gcccagctgg ccaccgtgca gggcaccaag accgatctcc tcaagtgcgc 1801 caagtgcaag aagcgcaact gcacctacaa ccagctgcag actcgttccg ccgatgaacc 1861 tatgaccacc ttcgtcatgt gcaacgagtg cggcaaccga tggaagttct gctaactccc 1921 gaaaattgtt ccaaaatata aatcaatccc aaatgagcac acaccacaca tccttcatat 1981 tcttaaatga aacattgtaa agacacgaca cgcgagaaaa cattttgtat ctgctgccca 2041 actgcggagg cttttactct gaccacctaa accttaaacg agagaaaaga aatttcaata 2101 aacattaact attgataaaa cggagacgtc ttgttgccgc aatcagtttt ttaaaaacgc 2161 cggtgatcac gaccacgcgc tgataactcg ccgataacac tgcgggcgat // LOCUS DROTU4A 660 bp DNA INV 15-JUN-1989 DEFINITION D.melanogaster TU-4 mRNA encoding vitelline membrane protein, complete cds. ACCESSION M20936 NID g158728 KEYWORDS follicle cell gene cluster. SOURCE D.melanogaster eggchamber, DNA and cDNA to mRNA, clone TU-4. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 660) AUTHORS Popodi,E., Minoo,P., Burke,T. and Waring,G.L. TITLE Organization and expression of a second chromosome follicle cell gene cluster in Drosophila JOURNAL Dev. Biol. 127, 248-256 (1988) MEDLINE 88242923 FEATURES Location/Qualifiers source 1..660 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..660 /note="Vitelline membrane 26Ab" /gene="Vm26Ab" /allele="" /db_xref="FlyBase:FBgn0003980" mRNA 36..660 /gene="Vm26Ab" /note="TU-4 mRNA (major alt.)" /db_xref="FlyBase:FBgn0003980" mRNA 37..660 /gene="Vm26Ab" /note="TU-4 mRNA (minor alt.)" /db_xref="FlyBase:FBgn0003980" sig_peptide 98..166 /gene="Vm26Ab" /note="vitelline membrane protein signal peptide" /db_xref="FlyBase:FBgn0003980" CDS 98..604 /gene="Vm26Ab" /note="vitelline membrane protein precursor" /codon_start=1 /db_xref="FlyBase:FBgn0003980" /db_xref="PID:g158729" /translation="MAFNFGHLLIAGLVALSAVSSETIQLQPTQGILIPAPLAENIRV SRAAYGGYGAAPAAPSYSAPAAPAAQAYSAPAAPAYSAPAAPAYSAPAAPAYSAPAAP AYSAPAAPAYSAPASIPSPPCPKNYLFSCQPSLQPVPLSAPAQSYGSAGAYSQYVPQY AVPFVREL" mat_peptide 167..601 /gene="Vm26Ab" /note="vitelline membrane protein" /db_xref="FlyBase:FBgn0003980" BASE COUNT 112 a 272 c 145 g 131 t ORIGIN Chromosome 2 region 26A. 1 tgggctataa agtggattgg ctgggaggct acaatcaaca gtcagccttc gttcgtcact 61 tcagcagcaa gtagagacag ctcaagaacc atccgcaatg gcattcaact ttggtcacct 121 cctcatcgcc ggcctcgtgg ccttgtccgc cgtgtcctcg gagaccatcc agctgcagcc 181 cactcagggc atcctcatcc ccgccccgct ggccgagaac atccgtgtgt cgcgtgccgc 241 ctacggagga tacggcgctg ccccagccgc cccatcgtac tccgccccag ccgctcccgc 301 tgcccaggcc tactctgctc ccgctgcccc agcctactcc gcacccgctg ctcccgccta 361 ctccgcaccc gctgctcctg cctactctgc tcccgctgcc ccagcttact ctgccccagc 421 cgcaccagct tactccgcac ccgcctccat tccgtcgccg ccgtgcccca agaactacct 481 gttcagctgc cagccctccc tgcagcccgt gcccctgtcc gccccagctc agtcctacgg 541 atccgccggt gcctactccc agtacgtgcc ccagtacgcc gtgcccttcg tccgcgaact 601 ttaaggatcg aaccgaatct gacttgacat ctgaacctaa gaataaagta atgctttcat // LOCUS DROVITA 671 bp DNA INV 15-MAR-1989 DEFINITION Drosophila vitelline membrane protein 26A-1 gene, complete cds. ACCESSION M18280 NID g158799 KEYWORDS membrane protein; vitelline membrane protein. SOURCE Drosophila ovary DNA, and cDNA to mRNA, clone pDmo26A-1. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 671) AUTHORS Burke,T., Waring,G.L., Popodi,E. and Minoo,P. TITLE Characterization and sequence of follicle cell genes selectively expressed during vitelline membrane formation in Drosophila JOURNAL Dev. Biol. 124, 441-450 (1987) MEDLINE 88055846 COMMENT The sequence as given in [1] is derived from DNA (positions 1 to 549) and from cDNA (positions 550 to 671). FEATURES Location/Qualifiers source 1..671 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..671 /note="Vitelline membrane 26Aa" /gene="Vm26Aa" /allele="" /db_xref="FlyBase:FBgn0003979" mRNA 43..>671 /gene="Vm26Aa" /note="26A-1 mRNA" /db_xref="FlyBase:FBgn0003979" sig_peptide 124..192 /gene="Vm26Aa" /note="vitelline membrane protein 26A-1 signal peptide (3' end could be 198)" /db_xref="FlyBase:FBgn0003979" CDS 124..549 /gene="Vm26Aa" /note="vitelline membrane protein 26A-1 precursor" /codon_start=1 /db_xref="FlyBase:FBgn0003979" /db_xref="PID:g158800" /translation="MKSFVCIALVAFAAAALASPTNVASATGSTGSSVTTQDGELEGV TGQGFGDLTRLRKSAYGGSSGGYGGSSIPAPPCPKNYLFSCQPNLAPVPCSAPAPSYG SAGAYSSPVATYVAPNYGVPQHQQQLYSAYVPQTYGYQY" mat_peptide 193..546 /gene="Vm26Aa" /note="vitelline membrane protein 26A-1 (5' end could be 199)" /db_xref="FlyBase:FBgn0003979" BASE COUNT 150 a 243 c 156 g 122 t ORIGIN 23 bp upstream of HaeIII site. 1 ggagagctat aaaagatggg aggccaattg aatggtattg gcatcagtca cctttggtaa 61 ctaccagcag cccaaccagc tcccatccgc ctccagctca atcttcaacc accaacaacc 121 aagatgaaat ccttcgtgtg catcgctctg gtcgccttcg ccgccgccgc tctggcttcg 181 cccaccaacg tggcttcggc caccggctcc actggctcct cggtgaccac ccaggacgga 241 gagctggagg gagtgaccgg acagggattc ggtgacctga cccgtctccg taagtctgcc 301 tacggcggca gctccggcgg ctatggcggc tccagcatcc cagctcctcc ctgccccaag 361 aactacctgt tcagctgcca gcccaacctt gcccccgtgc catgcagcgc tccagctccc 421 agctacggat ccgccggcgc ctactcctcc ccggtggcca cctacgtcgc ccccaactac 481 ggcgtgcccc agcaccagca gcagctgtac agcgcctacg tgccccagac ctatggctac 541 cagtactaag cacctgctcc gactgcgact cgatcatcgc ccaaggacca cgaaccgact 601 gccgagaaac ataagctttg atggatttga caaaaaatat acccaaaaat atgtactgca 661 attaaatcac t // LOCUS DROVMP 665 bp DNA INV 15-DEC-1989 DEFINITION D.melanogaster vitelline membrane protein gene, complete cds. ACCESSION M27647 NID g158803 KEYWORDS vitelline membrane protein. SOURCE D.melanogaster (strain Oregon R) embryo DNA, clone VM32E. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 665) AUTHORS Gigliotti,S., Graziani,F., De Ponti-Zilli,L., Rafti,F., Manzi,A., Lavorgna,G., Gargiulo,G. and Malva,C. TITLE Sex-, tissue-, and stage-specific expression of a vitelline membrane protein gene from region 32 of the second chromosome of Drosophila melanogaster JOURNAL Dev. Genet. 10, 33-41 (1989) MEDLINE 89195794 COMMENT Draft entry and printed copy of sequence for [1] kindly submitted by S.Gigliotti, 29-SEP-1989. FEATURES Location/Qualifiers source 1..665 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..665 /note="Vitelline membrane 32E" /gene="Vm32E" /allele="" /db_xref="FlyBase:FBgn0014076" TATA_signal 19..25 /gene="Vm32E" /db_xref="FlyBase:FBgn0014076" mRNA 67..500 /gene="Vm32E" /note="VMP mRNA" /db_xref="FlyBase:FBgn0014076" sig_peptide 96..146 /gene="Vm32E" /note="vitelline membrane protein signal peptide" /db_xref="FlyBase:FBgn0014076" CDS 96..446 /gene="Vm32E" /note="vitelline membrane protein precursor" /codon_start=1 /db_xref="FlyBase:FBgn0014076" /db_xref="PID:g158804" /translation="MQIVALTLVAFVAIAGASCPYAAPAPAYSAPAASSGYPAPPCPT NYLFSCQPNLAPAPCAQEAPAYGSARAYTEQVPTTWTSPNREQLQQFHQRIGMAALME ELRGLGQGIQGQQY" mat_peptide 147..443 /gene="Vm32E" /note="vitelline membrane protein" /db_xref="FlyBase:FBgn0014076" BASE COUNT 176 a 169 c 145 g 175 t ORIGIN 241 bp upstream of PvuII site; chromosome 2 map position 32E. 1 aaaagtgccg agttttgtta ttaaagtcaa cgcatgaatg ctataagaat gccaccattg 61 gtcactaaat cgacagtgta aatcattagt tcatcatgca gatcgttgct ctcaccctcg 121 ttgcgtttgt ggccattgcc ggtgcctcct gcccgtatgc agctccagct ccagcttatt 181 cagcgcccgc tgcttcttct ggctacccgg ctccaccatg ccccaccaac tacctgttca 241 gctgccagcc caatttggcc ccagctcctt gtgcccagga ggccccagcc tatggatccg 301 cccgcgccta cacagaacag gtgcccacta cgtggacaag tcccaaccga gagcagttgc 361 agcaatttca ccagcgcatt ggaatggcgg ctttgatgga ggaactgcgc ggcttgggcc 421 aaggaatcca gggtcaacag tactagtggc aaaaaaaatt catgtgaaga atgttttcga 481 attaaatccg tctatgcttt aattggactt tatactatgg aacaaaaaaa aaattgggat 541 tggagataag gaaaactggt aaaaaaaata ggagttaaac ttattttgtt gttttgtgcc 601 tctggcctcc gattcctttc gaaagccata aagaacattg tccgtctgta tttatatatt 661 ctaac // LOCUS S61734S2 1409 bp DNA INV 14-OCT-1993 DEFINITION omb (biD4)=optomotor-blind gene [Drosophila melanogaster, larvae, Genomic Mutant, 1409 nt, segment 2 of 4]. ACCESSION S61735 NID g402321 KEYWORDS . SEGMENT 2 of 4 SOURCE fruit fly larvae. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 1409) AUTHORS Poeck,B., Balles,J. and Pflugfelder,G.O. TITLE Transcript identification in the optomotor-blind locus of Drosophila melanogaster by intragenic recombination mapping and PCR-aided sequence analysis of lethal point mutations JOURNAL Mol. Gen. Genet. 238 (3), 325-332 (1993) MEDLINE 93261414 REMARK GenBank staff at the National Library of Medicine created this entry [NCBI gibbsq 132264] from the original journal article. This sequence comes from Fig. 3. Map location: X 4C. FEATURES Location/Qualifiers source 1..1409 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 294..1274 /note="bifid" /gene="bi" /allele="D4" /db_xref="FlyBase:FBgn0000179" CDS 294..1274 /gene="bi" /note="optomotor-blind gene; This sequence comes from Fig. 3" /codon_start=1 /db_xref="PID:g402324" /translation="MRYDVQELLLHQSAEDPFARFANGMAYHPFLQLTQRPTDFSVSS LLTAGSNNNNSGNTNSGNNNSNSNNNTNSNTNNTNNLVAVSPTGGGAQLSPQSNHSSS NTTTTSNTNNSSSNNNNNNSTHNNNNNHTNNNNNNNNNTSQKQGHHLSTTEEPPSPAG TPPPTIVGLPPIPPPNNNSSSSSSNNSASAAAHPSHHPTAAHHSPSTGAAAPPAGPTG LPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAGSPAGPHPGLYPGGGLRFPPH HPGAHPHAHHLGSAYTTAEDVVLASAVAHQQHPSAATAAGASARGRWRRR" BASE COUNT 432 a 447 c 285 g 245 t ORIGIN 1 tctcgaaaat ctcaagcggc gaccccaact aaaaatcata tttacgtttt ttatagcaat 61 gaaacatgaa tttttttgaa acaacaagaa gagaaataaa gtgtacaagt cagtgagtgt 121 cccaaacaaa aagttttaaa aaaaaagaaa caaaaacaag tacctgtaga acaaaaacaa 181 aataaagcat ctaaaaattt caaaagtcaa actagagaga tccctttttt ggagagatcg 241 ccgtgggaaa ccctttctgc atgacgcact tggttgtttg aaacggttat gtgatgagat 301 acgacgtcca ggagctgcta cttcatcagt ctgctgagga tccattcgcc aggttcgcca 361 atgggatggc atatcatcca tttctgcagc taacgcaacg acccactgac ttcagcgttt 421 cctcgctgtt gacggcgggt agcaacaata acaacagcgg caacaccaac agcggaaaca 481 acaactccaa ttccaacaac aacaccaatt caaacaccaa taacaccaac aatctcgtgg 541 ccgtttcacc aacgggtggt ggtgcgcagt tatcgccgca aagcaaccac agcagcagca 601 acaccaccac caccagcaac accaacaact ccagttccaa taacaacaat aataacagta 661 cccataataa taacaacaac cacacgaata acaacaacaa taataataat aacacaagtc 721 aaaagcaagg acaccacttg agcaccaccg aggaaccgcc atcgcccgct ggcacaccac 781 cgcccacaat tgttggtcta ccgccaatac caccgcccaa caacaacagc agtagcagca 841 gcagcaacaa ctcagcttca gccgccgccc atccgtcgca ccacccaacc gccgcacatc 901 actcacccag tacgggtgcc gccgcaccgc ccgccggccc cacaggcttg ccgccaccca 961 caccgccgca ccacctgcaa caacaacagc agcaacaaca gcacccggcc ccaccaccac 1021 caccgtactt tccagctgcg gcactggccg ctctagctgg aagtccggcc ggaccgcatc 1081 cgggtctgta tcccggcggt ggattgcgct tcccgccgca ccacccaggt gcccatccgc 1141 acgcccatca tctgggcagc gcctatacta ccgccgagga cgtcgtcctt gcctcggccg 1201 tcgcccatca gcagcatcca tcagctgcga ccgctgcggg cgcttcagcc cgaggacgat 1261 ggcgtcgtcg atgatcccaa ggtcacgctg gagggcaagg acctgtggga gaagttccac 1321 aaactgggca cgaaatggtc atcaccaaga gcggcaggtg agttctatta ctcattttac 1381 agggtattaa aggtctccca acatttatg // LOCUS S66940 396 bp DNA INV 04-FEB-1994 DEFINITION RPII15=RNA polymerase II subunit 9 [Drosophila melanogaster, Genomic, 396 nt]. ACCESSION S66940 NID g453010 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 396) AUTHORS Liu,Z., Kontermann,R.E., Schulze,R.A., Petersen,G. and Bautz,E.K. TITLE RPII15 codes for the M(r) 15,000 subunit 9 of Drosophila melanogaster RNA polymerase II JOURNAL FEBS Lett. 335 (1), 73-75 (1993) MEDLINE 94063084 REMARK GenBank staff at the National Library of Medicine created this entry [NCBI gibbsq 139685] from the original journal article. This sequence comes from Fig. 1. COMMENT DNA and protein are different from sequences previously reported by Harrison, D.A. in 1992. FEATURES Location/Qualifiers source 1..396 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..390 /note="RNA polymerase II 15kD subunit" /gene="RpII15" /allele="" /db_xref="FlyBase:FBgn0004855" CDS 1..390 /gene="RpII15" /note="This sequence comes from Fig. 1. Protein sequence is in conflict with the conceptual translation; mismatch(100[F->S]); RPII15 B9" /codon_start=1 /product="RNA polymerase II subunit 9" /db_xref="PID:g453011" /translation="MTTAFDAAHTEGPGFVGIRFCQECNNMLYPKEDKENKILLYACR NCDYKQEADSNCIYVNKIMHEIDELTHIVPDVISDPTLPRTEDHACPKCSHREAVFFQ AQTRRAEEEMRLYYVCTNQNCTHRWTE" BASE COUNT 98 a 118 c 110 g 70 t ORIGIN 1 atgacgactg cctttgatgc cgcacacact gaggggccgg gattcgtggg cattcggttc 61 tgccaggagt gcaacaacat gctgtacccc aaggaggaca aggagaacaa gatcctgctg 121 tacgcctgcc ggaattgcga ttacaaacag gaggcggact ccaactgcat ctacgtgaac 181 aagattatgc acgagatcga cgagctgacc cacattgtgc ccgacgtgat ttccgatccc 241 acgctgccgc gcaccgaaga ccacgcttgt cccaagtgct cccatcggga ggcggtctcc 301 ttccaggcgc aaactcgtcg cgccgaagag gagatgcgac tgtactacgt gtgcaccaac 361 cagaactgca cccaccgttg gacggagtag aaactg // LOCUS S74038 680 bp DNA INV 12-APR-1995 DEFINITION preprocorazonin [Drosophila melanogaster, Genomic, 680 nt]. ACCESSION S74038 NID g765231 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Hexapoda; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 680) AUTHORS Veenstra,J.A. TITLE Isolation and structure of the Drosophila corazonin gene JOURNAL Biochem. Biophys. Res. Commun. 204 (1), 292-296 (1994) MEDLINE 95032110 REMARK GenBank staff at the National Library of Medicine created this entry [NCBI gibbsq 157386] from the original journal article. This sequence comes from Fig. 1. FEATURES Location/Qualifiers source 1..680 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 226..444 /note="Corazonin" /gene="Crz" /allele="" /db_xref="FlyBase:FBgn0013767" CDS 226..444 /gene="Crz" /note="This sequence comes from Fig. 1." /codon_start=1 /product="preprocorazonin" /db_xref="PID:g765232" /translation="MLRLLLLPLFLFTLSMCMGQTFQYSRGWTNGKRSFNAASPLLAN GHLHRASELGLTDLYDLQDWSSDRRLER" BASE COUNT 197 a 167 c 131 g 185 t ORIGIN 1 taatctgggt aagtgtgtgt tctggagggc attgaagcaa ggattctgga ggaaaacgca 61 gacacatcac gcatcctttg gcatcaatcc ttaatggcta tctaacaacg atataaaagc 121 ccgtcgagga gcatcaatag ttcagacgca gttgtgattc gaacgcgaaa ggaaccaacc 181 gagattaccg agtgtcctgc aaacaggact aacttctgcc gaaacatgtt gcgcctcctg 241 ctgctgcccc tcttcctctt cacgctctcc atgtgcatgg gccagacctt ccagtactcc 301 cgcggatgga ccaacggcaa gaggtccttt aacgccgcat ctcccctcct ggccaacggc 361 catctccatc gggccagcga gctgggactc acggatctct acgatttgca ggattggagc 421 agcgatcgta ggctcgagcg gtaagtttca tcgaaagaat aacagaaata tacaacttta 481 tttttaaaat acataaagaa tatgataacc caaaaacatt ccattagata cctattaaaa 541 tcatataact aaggaattat atattataat tgccctactt atacacttca ttcctactta 601 ttttcttgtt ttttatgtat taaagtaata ttttaaaatt ttcctccagc tgtctatcgc 661 agctccaacg ttcacagatt // LOCUS SCU41441 571 bp DNA INV 02-MAR-1996 DEFINITION Drosophila melanogaster macrolide binding protein (FKBP12) gene, complete cds. ACCESSION U41441 NID g1209721 KEYWORDS . SOURCE fruit fly. ORGANISM Drosophila melanogaster Eukaryotae; mitochondrial eukaryotes; Metazoa; Arthropoda; Tracheata; Insecta; Pterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila. REFERENCE 1 (bases 1 to 571) AUTHORS Wang,T., Li,B.Y., Danielson,P.D., Shah,P.C., Rockwell,S., Lechleider,R.J., Martin,J., Manganaro,T. and Donahoe,P.K. TITLE The Immunophilin FKBP12 Functions as a Common Inhibitor of the TGF-beta Family Type I Receptors JOURNAL Unpublished REFERENCE 2 (bases 1 to 571) AUTHORS Wang,T. and Donahoe,P.K. TITLE Direct Submission JOURNAL Submitted (28-NOV-1995) Tongwen Wang, Pediatric Surgery, Mass. General Hosp., Fruit St. - WRN1121, Boston, MA 02114, USA FEATURES Location/Qualifiers source 1..571 /organism="Drosophila melanogaster" /db_xref="taxon:7227" gene 1..327 /note="FK506-binding protein 2" /gene="FK506-bp2" /allele="" /db_xref="FlyBase:FBgn0013954" CDS 1..327 /gene="FK506-bp2" /codon_start=1 /product="macrolide binding protein" /db_xref="PID:g1209722" /translation="MGVQVVPIAPGDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRN KPFKFTIGKGEVIRGWDEGVAQLSVGQSAKLICSPDYAYGSRGHPGVIPPNSTLTFDV ELLKVE" BASE COUNT 173 a 164 c 132 g 102 t ORIGIN 1 atgggagtac aagtagttcc aattgctcct ggtgatggca gcacctatcc caagaatggc 61 caaaaggtca cggtccacta caccggcacc ctggacgatg gcaccaagtt cgattcgtcg 121 cgcgaccgca acaagccatt caagttcacc atcggcaagg gcgaggtcat ccgtggctgg 181 gatgagggag ttgcccagtt gagcgtcggc cagagcgcca agctgatttg ctcgccggac 241 tatgcctacg gtagccgtgg ccaccccggc gtcattccgc ccaactccac cctcaccttc 301 gacgtcgagc tgctcaaggt cgaataggcg cacaggatgc ccaatgtgta taccccaaac 361 caaatcgcag ggggttgcgg accggcgcac cggcgacgag ccgaagaaca tcataatcgg 421 aaccagaaca atccagcagc atttgccaac ccaaaataat aatgataact tcatacacag 481 ctctaaacta gaactaattt aaccgcaaag ggaacgcatc ttctaccaat acaaataaac 541 atttattcaa gtcaaaaaaa aaaaaaaaaa a //