Promoter recognition (cont.)

• CBS Promoter 2.0 Prediction Server

  • Simulated transcription factors
  • Principles common to neural networks and genetic algorithms
  • Knudsen (1999), Bioinformatics 13(5), 356-361.
  • http://genome.cbs.dtu.dk/services/promoter/

• CorePromoter

  • Position dependent 5-tuple
  • QDA
  • Michael Zhang (1998), Genome Research, 8, 319-326.
  • http://scislio.cshl.org/genefinder/CPROMOTER/

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