Berkeley Drosophila Genome Project
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Projects
2nd Chromosome: Source Exelixis
Click [HERE] to view Table Legend
| STS | Cytological location |
Flanking sequence |
Nucleotide position |
Q1037 | iso2 | |
|---|---|---|---|---|---|---|
| Dm3035 | 21B7-21C3 | GCCCG - CAGAA | 25 | A | G | |
| ATTTT - CATTA | C | T | ||||
| Dm3976 | 21C1-21C2 | TTGAA - AGAAG | 474 | A | G | |
| Dm3641 | 21C6-21C7 | GCACA - AGCAC | 1566 | AGCACT | DEL | |
| AGCAC - AGCAC | 1577 | T | C | |||
| Dm0099 | 21C6-21C8 | ATTGA - TAAAA | T | C | ||
| Dm0447 | 21D1-21D2 | TCTCT - ACGGC | T | C | ||
| Dm0375 | 21E3-21F3 | GTCGC - CTGGT | 98 | C | A | |
| TACGG - AGYGT | 32 | A | G | |||
| Q1037 | 22D1-D2 | Q1037 | Q1040 | iso2 | ||
| Dm2641 | 23A1-23A3 | ACTTG - CCCAG | 12 | A | A | G |
| Dm3866 | 23A1-23A3 | GGAGA - TGGCG | 48 | C | C | G |
| GTCGC - GCTGA | 128 | G | G | A | ||
| Dm2197 | 23E1-23E2 | ATTTT - TATAA | 30 | A | A | G |
| TATAA - GGCAA | 36 | A | A | DEL | ||
| AGTAG - GTTTT | 62 | DEL | DEL | AA | ||
| TTTTT - AATTT | 71 | DEL | DEL | TTT | ||
| TTTCC - C-ATA | 81 | T | T | C | ||
| TCC-C - ATATG | 83 | A | A | C | ||
| TTATT - A-TTT | 102 | T | T | A | ||
| ATT-A - TTCTA | 106 | A | A | T | ||
| TTTAC - CCTTT | 121 | T | T | G | ||
| Dm0611 | 23E1-23E4 | ATCTT -TATAG | 93 | C | C | T |
| ACTCG - TGTGT | 109 | G | G | C | ||
| Dm0606 | 23F1-23F2 | GCGCA -- AGAGG | 55 | CT | CT | GG |
| GAGGA - TTGT | 63 | A | A | T | ||
| TTGT - TTGCT | 68 | T | T | G | ||
| TCCTC - GTAAC | 149 | G | A | |||
| Dm0195 | 25C6-25D1 | AGCAG - CAGCT | 1758 | C | C | G |
| Dm0092 | 25E5-25F1 | AGTGT - GTGTC | 106 | A | A | T |
| Dm3090 | 25F1-25F2 | GTAAA - CACAA | 30 | T | G? | T |
| CACAA - GTACT | 36 | CTGA | TGGT | CTGA | ||
| Dm2207 | 26D1-26D2 | TCCGT - TCCAG | 28 | A | A | G |
| Dm0680 | 26F3-26F4 | CCTTT - ACTTG | 59 | DEL | DEL | TC |
| GTGAA - TGTAG | 80 | C | C | G | ||
| Dm0681 | 27A1-27B1 | GAAAA - TGTTG | 889 | T | T | C |
| Dm2831 | 27A1-27B1 | GGAGT - CTCTC | 76 | G | G | T |
| CTCT - CGCTC | 81 | T | C | C | ||
| GTGTA - AGATC | 107 | A | G | G | ||
| TTAGA - AAGCG | 144 | G | T | G | ||
| Dm3015 | 29A2 | AACTG - CTTTT | 21 | T | C | |
| TGTTT - AAAGT | 112 | A | G | |||
| AACAC - CGGTT | 145 | T | A | |||
| Dm3138 | 29A2 | TTTGG - CTTAC | 62 | CCCAG | ||
| Dm0087 | 29A5-29B4 | AAACA - GAACG | 32 | A | G | A |
| TATGC - ACCTC | 111 | T | T | C | ||
| TCTAA - GATGG | 129 | A | C | C | ||
| Dm0274 | 29A5-29B4 | GGTAC -CGGTA | 32 | T | G | G |
| TTAAT - CAAAT | 101 | A | G | G | ||
| GCCGA - AGGTG | 128 | T | C | C | ||
| Q1040 | 29C1-C2 | Q1040 | Q1042 | iso2 | ||
| Dm3084 | 29F1-29F3 | GGCAA - AAAAA | 79 | A | C | |
| Dm0434 | 30A3-30A6 | AGGCA - AAAAA | 91 | A | A | C |
| Dm3096 | 30A8 | GAGAC - GTCGT | 1384 | A | A | T |
| GTCCT - AAAAG | 1573 | G | G | A | ||
| D1265 | 31A2-31B5 | ACCTA - TATCG | 262 | A | G | A |
| Dm2112 | 33A1-33A2 | GAGAA - AGCGG | 123 | A | G | A |
| Dm0240 | 33A3-33A8 | ATGTG - GTGCA | 514 | C | C | T |
| CATAT - TTTGG | 546 | GTA | DEL | DEL | ||
| Dm2477 | 33B1-33B2 | CGCCA - AAGTC | 21 | T | C | C |
| ATGAC - ATTTT | 115 | A | T | T | ||
| Dm0245 | 33C1-33C2 | TTAAG - CTAAA | 68 | AAAAAAG | ||
| AAAGT - CAAAA | 84 | C | ||||
| AAGTT - AAAAA | 128 | A | ||||
| GAGTT - CGGTT | 143 | A | ||||
| Dm3078 | 34A1-34A2 | TGGCA - AAAAT | 20 | G | G | A |
| GCACA - AATGA | 35 | G | T | G | ||
| TTTTG - AAACA | 62 | AGCCA | AGCCA | CGCCG | ||
| ACTAG -TGATT | 72 | DEL-TTT | DEL-TTT | ATAG | ||
| GATTT - TGAAC | 81 | C | C | G | ||
| GGTTT - TAGAC | 111 | T | T | G | ||
| AATAG - TATCA | 129 | A | A | G | ||
| TCAAA - AAC | 132 | G | C | C | ||
| ACAAC - GCATT | 141 | A | A | C | ||
| Dm2076 | 34B2-34B6 | ACGTT - GTGTA | 285 | T | T | C |
| GATCC - CTGCC | 264 | A | A | C | ||
| Dm3635 | 34C1-34C2 | CCGCA - AATCG | 85 | C | T | |
| GCTTG - ATAAA | 143 | G | A | |||
| AAAAT - TAAGA | 151 | T | G | |||
| Dm0393 | 34D1-34D6 | TAACA - TAATT | 920 | A | T | |
| ACTGC - GTGAG | 1061 | TC | AA | |||
| CGACG - CGATC | 51 | G | T | T | ||
| Dm0012 | 35A1-35A2 | AATTT - TAAAG | 74 | G | T | T |
| Q1042 | 35E1-E2 | Q1042 | Q1805 | iso2 | ||
| Dm0043 | 35F1-35F2 | GATGG - CAGTC | 59 | A | T | |
| Dm0053 | 36A1-36A2 | TGTAA - AATTG | 342 | GGG | CAA | GGG |
| TGTAA - GGAAT | 358 | G | T | G | ||
| Dm0019 | 36A7 | TCTGC - TCTTG | 297 | A | A | C |
| Dm2451 | 36B3-36C1 | TCCTT - AGACA | 108 | A | A | G |
| Dm2813 | 36C1-36C2 | CGTAT - TCATT | 1352 | C | A | |
| Dm0332 | 38B2-38B6 | TCACC - TGTGT | 29 | C | A | |
| Dm0353 | 39A3-39A7 | CTGCT - CAGCT | 26 | A | A | G |
| TGGGA - AAATC | 212 | T | A | A | ||
| Dm0975 | 41C1-41C6 | TGATA-TGCGT | DEL | DEL | TGCG | |
| Dm0976 | 41C1-41C6 | AGGTT-GCAAA | C | T | ||
| ACTTT-CATAA | G | C | ||||
| Dm0776 | 41D1-41D2 | TGAAT - TATAG | 95 | C | C | A |
| Dm3495 | 42A1-42A2 | CGGGG-CTTGT | G | |||
| CGAGA-GTCAG | T | |||||
| Dm3117 | 42A1-42A3 | GTCTA - GCCAT | 50 | A | G | G |
| Dm2106 | 42B4-42C2 | AGTTT-TAAGC | C | C | T | |
| AGCAG-AGTCC | G | G | A | |||
| TGCGA-GGAGA | C | C | T | |||
| GCTTT-ACAGG | C | C | T | |||
| Dm0749 | 43B3-43C5 | TCCAG-ACAAT | C | C/A | C | |
| Dm0227 | 42C1-42C2 | GCAAT - TATAG | 381 | C | C | C |
| Dm3386 | 42E1-42E2 | TGAGC - AAGGA | 68 | C | C | |
| CTGTT - AGTTA | 114 | T | G | |||
| Dm0742 | 43A3-43A4 | TACTA - TACAA | 135 | C | T | |
| Q1805 | 43E9-43E10 | Q1805 | Q1049 | iso2 | ||
| Dm0735 | 43E12-43F2 | CCAAG-TGCGC | T | T | C | |
| Dm0747 | 44B1 | CTCTA - CCAAC | 134 | T | C | |
| Dm2512 | 44C4-44C5 | GTTGC - ATTCG | 154 | A | C | |
| Dm0739 | 44D1-44D2 | TCCAA - AAGAA | 173 | C | C | T |
| Dm0740 | 44D1-44D2 | AATAA-AACGC | G | A | ||
| AATAA-AAACA | T | A | ||||
| Dm2209 | 44D1-44D2 | CAATA-AAGTA | G | G | A | |
| TATCA-AACAT | G | G | A | |||
| Dm0722 | 44D5-44E2 | CACCG-T-TTACT | ||||
| Dm0004 | 45A7-45B2 | AATTA - ATTAA | 1278 | T | A | T |
| GTGGA - ATGAC | 1302 | C | C | A | ||
| TTATT - TTTAA | 1340 | C | C | C | ||
| Dm0424 | 46A1-46B2 | CTGCC - TTTCT | 84 | T | A | |
| Dm3845 | 46B1-46B2 | AGTTTTT-AATAC | C | C | A | |
| Dm2296 | 47B1-47B5 | CTACG - CCTTG | 103 | A | T | A |
| Dm2573 | 48A1-48A6 | AGTCG - GTTGT | 42 | C | ||
| TTCCA - ATTTT | 59 | T | T | |||
| GGTTC - ACTGG | 126 | T | ||||
| CAGCG - TTCGG | 147 | T | ||||
| Dm2795 | 48C1-48C2 | TGGTG - AAAAT | 145 | C | A | C |
| CTTCG - TGGTG | 136 | A | G | G | ||
| TGTTC - AAATT | 160 | A | G | G | ||
| Dm0084 | 48C5-48D2 | CTCAT - CAGCT | 762 | C | T | |
| TTATT - GAGAG | 772 | C | A | |||
| D1161 | 49A1-49A13 | GCTTC - CGGAT | 180 | C | C | T |
| Dm2939 | 49D1-49D3 | CTTTT - TCTTT | 1832 | CCCC | TCCT | |
| TTTGA - TTCAC | 1856 | DEL | T | |||
| TTCAC - CA | 1862 | A | T | |||
| CA - TTTTT | 1865 | DEL | TC | |||
| TTTTT - AATTT | 1876 | DEL | T | |||
| Q1049 | 49D1-D3 | Q1049 | Q1047 | iso2 | ||
| Dm0798 | 50A2-50A3 | TTGCC - CTGGG | 46 | C | ||
| Dm2480 | 50A3-50A4 | CCTAA - GACGT | 1284 | A | A | DEL |
| CCCCT - AAGAC | 1282 | A | A | DEL | ||
| TATCC - ACAAC | 1312 | C | C | T | ||
| Dm3030 | 51B1-51B5 | GCATT - TTTGG | 571 | C | T | |
| Dm3058 | 51B1-51B5 | GGAAG - CAAAA | 54 | G | G | C |
| AGCAA - CAAGT | 99 | C | C | G | ||
| Dm2663 | 51E5-51E8 | TCATT - TTTTT | 151 | A | A | G |
| Dm0794 | 52A10-52A11 | CCACT - TCCCC | 152 | A | A | C |
| AGTTC - AACCG | C | C | A | |||
| Dm0313 | 53C7-53C14 | CTTGT - AAATA | 1762 | T | T | A |
| TACGG - AAACA | 1690 | A | A | G | ||
| Dm2498 | 53D1-53D5 | ACACG - CGCCC | 78 | A | A | G |
| Dm2188 | 53E6-53F4 | AAAAG - GGTTG | 121 | C | C | T |
| AATCG - TTTCT | 167 | T | T | C | ||
| Dm2192 | 54A2-54B1 | AAATG-TGGTT | G | G | T | |
| Dm0068 | 54E8-54F2 | AGCAA-AACAACAAT--GCCTT | ||||
| CACAG-GCTCG-TACAT | ||||||
| D1315 | 55A1-55A2 | ACTGT - CGTCT | 21 | T | T | G |
| GCCGC - TTGGT | 72 | A | A | G | ||
| Dm0302 | 55A2-55B1 | AATTC-CTGCA | C | A | ||
| Dm1720 | 55A2-55B1 | TAAGT-TGCCA | G | G | C | |
| Dm2631 | 55A2-55B1 | TTTTA-TTGCG | G | G | T | |
| Dm0326 | 56D3-56D10 | CCAAC - AACCC | 88 | TGGATAAC | TGGATAAC | DEL |
| Dm2669 | 56E | AATTG - TGACT | 78 | C | C | T |
| ATTTT - GAAC | 124 | A | A | C | ||
| GAAC - TTAGT | 129 | T | T | C | ||
| TTCGT - GCATG | 144 | A | A | G | ||
| Dm2677 | 56E | GCAGT - AGTGG | 134 | A | A | T |
| Dm0829 | 57A1-57A2 | ATTTT - CGTTT | 132 | T | T | G |
| Q1047 | 57A3 | Q1047 | iso2 | |||
| Dm0824 | 57A4-57A6 | GAGCT - GGCGC | 52 | T | G | |
| TATAT - TCAGC | 181 | DEL | AT | |||
| Dm0306 | 57B1-57B2 | CAAGC - GAAAG | 859 | G | T | |
| Dm2553 | 57B14-57C1 | ATTTG - GGTCT | 103 | T | C | |
| Dm0063 | 57E2-57E8 | TTAGC-TAAAC | G | |||
| Dm2888 | 57E2-57E8 | AGGTG - TTTAA | 144 | G | A | |
| Dm1544 | 58B10-58C4 | ATACC - TCACC | 493 | G | G | |
| Dm2724 | 58B10-58C4 | TTTGT - GAATA | 37 | C | A | |
| TCTTT - AGTTT | 73 | T | DEL | |||
| AAAGC - TAA | 111 | C | T | |||
| TAA - GAATG | 120 | T | A | |||
| Dm2240 | 59C2-59C3 | TTATA - ACATA | 36 | C | T | |
| TATGT - GGCAC | 40 | TATG | DEL | |||
| AAGAG - GATTT | 69 | TT | CA | |||
| Dm2487 | 59F2 | ATTCC - AACAA | 33 | A | G | |
| AGGCA - GCGAT | 108 | T | T | |||
| Dm2564 | 60E5-60E11 | AGGAG - TATTC | 153 | T | C | |
| Dm2486 | 60F1-60F5 | GGCAT - ATTGG | 812 | C | G | |
| CAGTC - AGCTT | 840 | G | A |