Berkeley Drosophila Genome Project
BDGP Resources
Download Previous Releases of the Drosophila Genomic Sequence
| Description | Last updated | Database (via http) | Compressed version (via ftp) |
|---|---|---|---|
| Release 2.5 BAC-based Complete Sequence Contigs | |||
| [Release 2.5](/sequence/assembly.html) Finished Drosophila genomic clone sequences from BDGP and Celera (may include sequence not yet in GenBank) | [an error occurred while processing this directive] | [na\_clones.dros.RELEASE2.5](/data/sequence/sequence_db/na_clones.dros.RELEASE2.5) | [na\_clones.dros.RELEASE2.5.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_clones.dros.RELEASE2.5.Z) |
| Release 2 Whole Genome Sequence | |||
| Drosophila genomic sequence from Celera & BDGP's [Release 2](/annot/release2.html) (10/2000) as chromosome arms--gaps (indicated by Ns) in sequence reflect actual length where known or 1kb where unknown | [an error occurred while processing this directive] | [na\_arms.dros.RELEASE2](/data/sequence/sequence_db/na_arms.dros.RELEASE2) | [na\_arms.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_arms.dros.RELEASE2.Z) |
| Nucleic acid sequence for every predicted transcript cDNA from [Release 2](/annot/release2.html) (10/2000) | [an error occurred while processing this directive] | [na\_gadfly.dros.RELEASE2](/data/sequence/sequence_db/na_gadfly.dros.RELEASE2) | [na\_gadfly.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadfly.dros.RELEASE2.Z) |
| Nucleic acid sequence for coding region (CDS) of every predicted transcript from [Release 2](/annot/release2.html) (10/2000) | [an error occurred while processing this directive] | [na\_gadflyCDS.dros.RELEASE2](/data/sequence/sequence_db/na_gadflyCDS.dros.RELEASE2) | [na\_gadflyCDS.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadflyCDS.dros.RELEASE2.Z) |
| Translated polypeptide for every predicted transcript from [Release 2](/annot/release2.html) (10/2000) | [an error occurred while processing this directive] | [aa\_gadfly.dros.RELEASE2](/data/sequence/sequence_db/aa_gadfly.dros.RELEASE2) | [aa\_gadfly.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/aa_gadfly.dros.RELEASE2.Z) |
| Nucleic acid sequence for genomic region (including 500bp upstream and downstream) of every predicted transcription unit from [Release 2](/annot/release2.html) (10/2000) | [an error occurred while processing this directive] | [na\_gadflyregion.dros.RELEASE2](/data/sequence/sequence_db/na_gadflyregion.dros.RELEASE2) | [na\_gadflyregion.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadflyregion.dros.RELEASE2.Z) |
| The Celera/BDGP whole-genome shotgun sequence from [Release 2](/annot/release2.html) (10/2000), broken into 350Kb pieces | [an error occurred while processing this directive] | [na\_geno.dros.RELEASE2](/data/sequence/sequence_db/na_geno.dros.RELEASE2) | [na\_geno.dros.RELEASE2.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_geno.dros.RELEASE2.Z) |
| Release 1 Whole Genome Sequence | |||
| Drosophila genomic sequence from Celera & BDGP's Release 1 (3/2000) as chromosome arms--gaps (indicated by Ns) in sequence reflect actual length where known or 1kb where unknown | [an error occurred while processing this directive] | [na\_arms.dros.RELEASE1](/data/sequence/sequence_db/na_arms.dros.RELEASE1) | [na\_arms.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_arms.dros.RELEASE1.Z) |
| Comprehensive set of scaffolds from Celera & BDGP (unordered and unoriented) from Release 1 (3/2000)--including heterochromatic scaffolds | 25-Apr-2000 | [na\_scaffolds.dros](/data/sequence/sequence_db/na_scaffolds.dros) | [na\_scaffolds.dros.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_scaffolds.dros.Z) |
| Nucleic acid sequence for every predicted transcript cDNA from Release 1 (3/2000) | [an error occurred while processing this directive] | [na\_gadfly.dros.RELEASE1](/data/sequence/sequence_db/na_gadfly.dros.RELEASE1) | [na\_gadfly.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadfly.dros.RELEASE1.Z) |
| Nucleic acid sequence for coding region (CDS) of every predicted transcript from Release 1 (3/2000) | [an error occurred while processing this directive] | [na\_gadflyCDS.dros.RELEASE1](/data/sequence/sequence_db/na_gadflyCDS.dros.RELEASE1) | [na\_gadflyCDS.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadflyCDS.dros.RELEASE1.Z) |
| Translated polypeptide for every predicted transcript from Release 1 (3/2000) | [an error occurred while processing this directive] | [aa\_gadfly.dros.RELEASE1](/data/sequence/sequence_db/aa_gadfly.dros.RELEASE1) | [aa\_gadfly.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/aa_gadfly.dros.RELEASE1.Z) |
| Nucleic acid sequence for genomic region (including 500bp upstream and downstream) of every predicted transcription unit from Release 1 (3/2000) | [an error occurred while processing this directive] | [na\_gadflyregion.dros.RELEASE1](/data/sequence/sequence_db/na_gadflyregion.dros.RELEASE1) | [na\_gadflyregion.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_gadflyregion.dros.RELEASE1.Z) |
| The Celera/BDGP whole-genome shotgun sequence from Release 1 (3/2000), broken into 350Kb pieces | [an error occurred while processing this directive] | [na\_geno.dros.RELEASE1](/data/sequence/sequence_db/na_geno.dros.RELEASE1) | [na\_geno.dros.RELEASE1.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_geno.dros.RELEASE1.Z) |
| BDGP/EDGP Genomic Clone Sequence | |||
| P1, BAC, and cosmid sequences from the BDGP & EDGP that have been submitted to GenBank (does not include whole genome shotgun sequence, but includes finished [Release 2.9](/annot/release2.html) sequence) | 20-Mar-2003 | [na\_geno\_clones.dros](/data/sequence/sequence_db/na_geno_clones.dros) | [na\_geno\_clones.dros.Z](ftp://ftp.fruitfly.org/pub/genomic/fasta/na_geno_clones.dros.Z) |