Berkeley Drosophila Genome Project
Home
We are participants in the modENCODE project.
September 15, 2009 Illumina RNA-Seq data from 30 developmental time points of D. melanogaster has been submitted to the Short Read Archive at NCBI as part of the modENCODE project. The data set currently contains 2.2 billion single-end and paired reads and over 201 billion base pairs.
Metamorphosis: The Artistic Impressions of Pamela Lewis
Projects
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Genomic
Sequencing
- Transcript Sequencing
- modENCODE
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Gene Expression
- Expression
Patterns
Systematic determination of patterns of gene expression in Drosophila embryogenesis by RNA in situ - CRM Analysis
- Expression
Patterns
- Gene Disruption Project
Insertion of single transposable elements to disrupt and misexpress Drosophila genes - Universal Proteomics Resource
Resources
- Download
Sequence data sets and annotations in fasta or xml format by http or ftp - Materials
Request genomic or cDNA clones, library filters or fly stocks - Publications
Browse or download BDGP papers - Methods
BDGP laboratory protocols and vector maps
Software Tools
- Analysis
Tools
Search sequences for CRMs, promoters, splice sites, and gene predictions - Apollo
Genome annotation viewer and editor
Search BDGP Site
About BDGP: general overview, contact information, news archive, how to cite BDGP
The Berkeley Drosophila Genome Project (BDGP) is a consortium of the Drosophila Genome Center funded by the National Human Genome Research Institute and the National Institute of General Medical Sciences through its support of work in the Susan Celniker, Roger Hoskins, Suzanna Lewis and Gary Karpen laboratories.