Splice site prediction (cont.)
Neural Network splice site predictor (NNSPLICE)
- Multi-layered feed-forward neural network
- Modeled after Brunak et al. (1991), JMB, 220, 49-65.
- Reese et al. (1997), JCB, 4(3), 311-323.
- http://www-hgc.lbl.gov/projects/splice.html
NetGene2
- Combination of neural networks and rule-based system
- Splice site signal neural network combined with coding potential
- Hebsgaard et al. (1996), NAR, 24(17), 3439-3452.
- Brunak et al. (1991), JMB, 220, 49-65.
- http://www.cbs.dtu.dk/services/NetGene2/