Splice site prediction (cont.)

• SplicePredictor

  • Logitlinear models for splice site regions
    • Degree of matching to the splice site consensus
    • Local compositional contrast
  • Brendel and Kleffe (1998), NAR, 26(20), 4748-4757.
  • http://gnomic.stanford.edu/~volker/SplicePredictor.html

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